pycom15g11280

EIN3-binding F-box protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
7613740 .. 7615686
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g11280.1

Sequence Viewer

Length: 1296 bp
ATGTCGAAGCTACTCGGTTTCTCCGGTAAAGATGATTTTTGCCCTGGGGGAATATACACAAACCCTAAAGAAGCTGGCCTCTTCTTGTCTCTTGGACACCATGCGGATATCCTATTTCCTCCTCGCAAGAGGTCTCGCATCAGTGCCCCCTTCGTTTTTAGCGGAGGACGTTTTGAGAAGGAGGTGTCTATAGATGTTCTACCAGATGAGTGCCTCTTTGAAATCTTTAAACGGATACCTGGAGGTGAGGAAAGGAGTGCTTGTGCGTGCGTTTCCAGGCGGTGGCTTAATGTTTTAAGTAATATCAATACGGACGAATTCAGCAGCAACCCAACCAACCTATCTTTCAAGCCTCAGGATGAGGTCTCTGGAAATAATTCTGAGGATCAGGAAGTTGAGAATTGTGGATATCTTTCCAGGAGCTTGGAAGGAAAAAAGGCAACAGATGTTAGACTTGCTGCTATTGCTGTTGGAACTGCTAGTCGTGGTGGATTGGGAAAGCTTATGATCCGAGGAAGCAATTCTGTTTGTGGGGTGACAAACCTTGGCCTTAAGGCAATATCCCATGGCTGTCCTTCCCTGAGGGTTCTTTCTTTGTGGAATGTGTCCTCCGTTGGAGATGAGGGCTTGTGTGAGATTGCTAAGCGCTGTCATCTGTTAGAGAAGCTTGACCTCACCCAGTGTCCTGCAATATCTGATAAGGGTTTGATTGCAATTGCCAAGAAGTGCCCTAATTTGACTGACGTATCACTTGAGTTTTGTTCCAACATTGGAAACGAAGGTCTTCAAGCTATTGGCCAGTGCTGCCCCAATCTCCGATCCATTTCAATCAAGAATTGCCGTCTTGTTGGGGATCAGGGAATTGCTGGTTTGCTATCTTCCACCTCTTATGTCCTGACAAAGGTGAAGCTTCAGGCTTTGACCATCTCTGATGTGTCACTTGCTGTTATTGGACACTACGGCTTGGCTGTAACTGATCTTGTCCTTGCCAGCCTCCGGAACGTGACTCAGAGGGGTTTCTGGGTCATGGGCAATGGTCAGGGACTGCAGAAGTTGAAGTCCTTCACTATTGCATCCTGTCAAGGTGTTACAGATACAGGTCTCCAAGCAGTAGGAAAAGGTTGCCCGAACTTGAAACAGTTTTGCCTTCGCAAATGTTTATTCATATCTGACAGTGGGTTGGTGTCATTTTGCAAAGCAACAAGATCGATCTTGAGAGCCTTCATTTGGAGGAGTGGCACAGGATCACCCAATTTGGGTTTTTTGGTGCTCTTTCCACTGGTGGTTCAAAATTGA

Protein Analysis

432

Amino Acids

46.25

Weight (kDa)

8.84

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 178 - 401 1.4e-22 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 282
AccIII TCCGGA 1 cut(s) 996
AciI CCGC 3 cut(s) 104, 162, 280
AclWI GGATC 5 cut(s) 393, 502, 813, 861, 1252
AcoI YGGCCR 1 cut(s) 796
AcsI RAATTY 1 cut(s) 317
AcuI CTGAAG 1 cut(s) 896
AdeI CACNNNGTG 1 cut(s) 681
AfeI AGCGCT 1 cut(s) 647
AfiI CCNNNNNNNGG 5 cut(s) 282, 901, 996, 1227, 1256
AflII CTTAAG 1 cut(s) 551
AgsI TTSAA 7 cut(s) 221, 349, 788, 828, 1057, 1135, 1289
AjnI CCWGG 4 cut(s) 43, 238, 275, 416
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 7 cut(s) 10, 74, 423, 502, 667, 791, 910
AluI AGCT 7 cut(s) 10, 74, 423, 502, 667, 791, 910
Alw21I GWGCWC 1 cut(s) 1272
Alw26I GTCTC 4 cut(s) 93, 138, 370, 1106
AlwI GGATC 5 cut(s) 393, 502, 813, 861, 1252
AlwNI CAGNNNCTG 1 cut(s) 1045
Aor13HI TCCGGA 1 cut(s) 996
Aor51HI AGCGCT 1 cut(s) 647
AoxI GGCC 3 cut(s) 76, 547, 796
ApeKI GCWGC 3 cut(s) 324, 458, 804
ApoI RAATTY 1 cut(s) 317
Asp700I GAANNNNTTC 4 cut(s) 376, 520, 783, 1061
AspLEI GCGC 1 cut(s) 648
AsuHPI GGTGA 5 cut(s) 257, 547, 667, 916, 1239
AxyI CCTNAGG 2 cut(s) 354, 581
BaeGI GKGCMC 2 cut(s) 148, 731
BaeI ACNNNNGTAYC 2 cut(s) 729, 762
BalI TGGCCA 1 cut(s) 798
BbsI GAAGAC 1 cut(s) 776
Bbv12I GWGCWC 1 cut(s) 1272
BbvI GCAGC 3 cut(s) 336, 445, 791
BccI CCATC 1 cut(s) 932
BceAI ACGGC 2 cut(s) 825, 976
BcgI CGANNNNNNTGC 2 cut(s) 1188, 1222
BciT130I CCWGG 4 cut(s) 45, 240, 277, 418
BciVI GTATCC 1 cut(s) 228
BcoDI GTCTC 4 cut(s) 93, 138, 370, 1106
BfaI CTAG 1 cut(s) 480
BfmI CTRYAG 2 cut(s) 189, 1046
BfoI RGCGCY 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 551
BfuI GTATCC 1 cut(s) 228
BisI GCNGC 3 cut(s) 325, 459, 805
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 3 cut(s) 326, 460, 806
Bme1390I CCNGG 4 cut(s) 45, 240, 277, 418
BmrFI CCNGG 4 cut(s) 45, 240, 277, 418
BmrI ACTGGG 1 cut(s) 673
BmsI GCATC 2 cut(s) 147, 1082
BmuI ACTGGG 1 cut(s) 673
BpiI GAAGAC 1 cut(s) 776
BpmI CTGGAG 1 cut(s) 261
Bpu1102I GCTNAGC 1 cut(s) 642
BpuEI CTTGAG 2 cut(s) 773, 1234
Bsa29I ATCGAT 1 cut(s) 1208
BsaI GGTCTC 3 cut(s) 138, 370, 1106
BsaJI CCNNGG 5 cut(s) 43, 44, 511, 544, 565
BsaWI WCCGGW 2 cut(s) 23, 996
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 5 cut(s) 282, 901, 996, 1227, 1256
Bse1I ACTGG 3 cut(s) 679, 799, 1284
Bse21I CCTNAGG 2 cut(s) 354, 581
Bse3DI GCAATG 1 cut(s) 1039
BseAI TCCGGA 1 cut(s) 996
BseBI CCWGG 4 cut(s) 45, 240, 277, 418
BseCI ATCGAT 1 cut(s) 1208
BseDI CCNNGG 5 cut(s) 43, 44, 511, 544, 565
BseGI GGATG 2 cut(s) 364, 1073
BseLI CCNNNNNNNGG 5 cut(s) 282, 901, 996, 1227, 1256
BseMI GCAATG 1 cut(s) 1039
BseMII CTCAG 4 cut(s) 368, 372, 572, 1022
BseNI ACTGG 3 cut(s) 679, 799, 1284
BseRI GAGGAG 2 cut(s) 111, 1246
BseSI GKGCMC 2 cut(s) 148, 731
BseXI GCAGC 3 cut(s) 336, 445, 791
BshFI GGCC 3 cut(s) 78, 549, 798
BshVI ATCGAT 1 cut(s) 1208
BsiHKAI GWGCWC 1 cut(s) 1272
BsiSI CCGG 2 cut(s) 24, 997
BslFI GGGAC 1 cut(s) 1056
BslI CCNNNNNNNGG 5 cut(s) 282, 901, 996, 1227, 1256
BsmAI GTCTC 4 cut(s) 93, 138, 370, 1106
BsmFI GGGAC 1 cut(s) 1056
BsnI GGCC 3 cut(s) 78, 549, 798
Bso31I GGTCTC 3 cut(s) 138, 370, 1106
Bsp1286I GDGCHC 3 cut(s) 148, 731, 1272
Bsp13I TCCGGA 1 cut(s) 996
Bsp143I GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
Bsp1720I GCTNAGC 1 cut(s) 642
Bsp19I CCATGG 1 cut(s) 565
BspACI CCGC 3 cut(s) 104, 162, 280
BspANI GGCC 3 cut(s) 78, 549, 798
BspCNI CTCAG 4 cut(s) 367, 373, 573, 1021
BspDI ATCGAT 1 cut(s) 1208
BspEI TCCGGA 1 cut(s) 996
BspMAI CTGCAG 1 cut(s) 1050
BspPI GGATC 5 cut(s) 393, 502, 813, 861, 1252
BspTI CTTAAG 1 cut(s) 551
BspTNI GGTCTC 3 cut(s) 138, 370, 1106
BsrDI GCAATG 1 cut(s) 1039
BsrI ACTGG 3 cut(s) 679, 799, 1284
BssECI CCNNGG 5 cut(s) 43, 44, 511, 544, 565
BssMI GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
BssT1I CCWWGG 2 cut(s) 544, 565
Bst2UI CCWGG 4 cut(s) 45, 240, 277, 418
Bst4CI ACNGT 2 cut(s) 1140, 1175
Bst6I CTCTTC 1 cut(s) 86
BstAFI CTTAAG 1 cut(s) 551
BstC8I GCNNGC 3 cut(s) 76, 268, 991
BstDEI CTNAG 5 cut(s) 354, 381, 581, 642, 1008
BstDSI CCRYGG 1 cut(s) 565
BstENI CCTNNNNNAGG 1 cut(s) 899
BstF5I GGATG 2 cut(s) 364, 1073
BstH2I RGCGCY 1 cut(s) 649
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 8 cut(s) 388, 510, 821, 856, 979, 1208, 1212, 1247
BstMAI GTCTC 4 cut(s) 93, 138, 370, 1106
BstMBI GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
BstMWI GCNNNNNNNGC 2 cut(s) 464, 804
BstNI CCWGG 4 cut(s) 45, 240, 277, 418
BstSCI CCNGG 4 cut(s) 43, 238, 275, 416
BstSFI CTRYAG 2 cut(s) 189, 1046
BstSLI GKGCMC 2 cut(s) 148, 731
BstV1I GCAGC 3 cut(s) 336, 445, 791
BstV2I GAAGAC 1 cut(s) 776
BstXI CCANNNNNNTGG 1 cut(s) 424
Bsu15I ATCGAT 1 cut(s) 1208
Bsu36I CCTNAGG 2 cut(s) 354, 581
BsuI GTATCC 1 cut(s) 228
BsuRI GGCC 3 cut(s) 78, 549, 798
BsuTUI ATCGAT 1 cut(s) 1208
BtgI CCRYGG 1 cut(s) 565
BtsCI GGATG 2 cut(s) 364, 1073
BtsIMutI CAGTG 5 cut(s) 148, 686, 806, 1180, 1277
Cac8I GCNNGC 3 cut(s) 76, 268, 991
CaiI CAGNNNCTG 1 cut(s) 1045
CfoI GCGC 1 cut(s) 648
ClaI ATCGAT 1 cut(s) 1208
CviAII CATG 3 cut(s) 101, 566, 1027
DdeI CTNAG 5 cut(s) 354, 381, 581, 642, 1008
DpnI GATC 8 cut(s) 387, 509, 820, 855, 978, 1207, 1211, 1246
DpnII GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
DraI TTTAAA 1 cut(s) 229
DraIII CACNNNGTG 1 cut(s) 681
EaeI YGGCCR 1 cut(s) 796
Eam1104I CTCTTC 1 cut(s) 86
EarI CTCTTC 1 cut(s) 86
Eco130I CCWWGG 2 cut(s) 544, 565
Eco31I GGTCTC 3 cut(s) 138, 370, 1106
Eco32I GATATC 2 cut(s) 109, 410
Eco47III AGCGCT 1 cut(s) 647
Eco57I CTGAAG 1 cut(s) 896
Eco81I CCTNAGG 2 cut(s) 354, 581
EcoNI CCTNNNNNAGG 1 cut(s) 899
EcoRI GAATTC 1 cut(s) 317
EcoRII CCWGG 4 cut(s) 43, 238, 275, 416
EcoRV GATATC 2 cut(s) 109, 410
EcoT14I CCWWGG 2 cut(s) 544, 565
ErhI CCWWGG 2 cut(s) 544, 565
FaeI CATG 3 cut(s) 104, 569, 1030
FaiI YATR 8 cut(s) 55, 102, 191, 506, 567, 891, 1028, 1166
FalI AAGNNNNNCTT 2 cut(s) 244, 276
FaqI GGGAC 1 cut(s) 1056
FatI CATG 3 cut(s) 100, 565, 1026
Fnu4HI GCNGC 3 cut(s) 325, 459, 805
FokI GGATG 2 cut(s) 371, 1060
Fsp4HI GCNGC 3 cut(s) 325, 459, 805
FspBI CTAG 1 cut(s) 480
GlaI GCGC 1 cut(s) 647
GluI GCNGC 3 cut(s) 325, 459, 805
GsuI CTGGAG 1 cut(s) 261
HaeII RGCGCY 1 cut(s) 649
HaeIII GGCC 3 cut(s) 78, 549, 798
HapII CCGG 2 cut(s) 24, 997
HhaI GCGC 1 cut(s) 648
Hin1II CATG 3 cut(s) 104, 569, 1030
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HindIII AAGCTT 3 cut(s) 500, 665, 908
HinfI GANTC 1 cut(s) 1006
HpaII CCGG 2 cut(s) 24, 997
HphI GGTGA 5 cut(s) 257, 547, 667, 916, 1239
Hpy188I TCNGA 7 cut(s) 382, 512, 697, 818, 931, 1011, 1171
Hpy188III TCNNGA 7 cut(s) 356, 369, 389, 832, 895, 997, 1213
HpyAV CCTTC 8 cut(s) 160, 172, 422, 585, 773, 1072, 1157, 1231
HpyCH4III ACNGT 2 cut(s) 1140, 1175
HpyCH4IV ACGT 3 cut(s) 169, 744, 1002
HpyCH4V TGCA 5 cut(s) 689, 713, 1048, 1073, 1194
HpyF10VI GCNNNNNNNGC 2 cut(s) 464, 804
HpyF3I CTNAG 5 cut(s) 354, 381, 581, 642, 1008
HpySE526I ACGT 3 cut(s) 169, 744, 1002
Hsp92II CATG 3 cut(s) 104, 569, 1030
HspAI GCGC 1 cut(s) 646
Kpn2I TCCGGA 1 cut(s) 996
Kzo9I GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
LmnI GCTCC 1 cut(s) 420
Lsp1109I GCAGC 3 cut(s) 336, 445, 791
LweI GCATC 2 cut(s) 147, 1082
MaeI CTAG 1 cut(s) 480
MaeII ACGT 3 cut(s) 169, 744, 1002
MaeIII GTNAC 5 cut(s) 535, 936, 970, 1003, 1087
MalI GATC 8 cut(s) 387, 509, 820, 855, 978, 1207, 1211, 1246
MboI GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
MboII GAAGA 3 cut(s) 73, 776, 870
MfeI CAATTG 1 cut(s) 714
MhlI GDGCHC 3 cut(s) 148, 731, 1272
MlsI TGGCCA 1 cut(s) 798
MluNI TGGCCA 1 cut(s) 798
MlyI GAGTC 1 cut(s) 1000
MmeI TCCRAC 3 cut(s) 451, 595, 789
Mox20I TGGCCA 1 cut(s) 798
MroI TCCGGA 1 cut(s) 996
MroXI GAANNNNTTC 4 cut(s) 376, 520, 783, 1061
MscI TGGCCA 1 cut(s) 798
MseI TTAA 4 cut(s) 228, 288, 296, 552
Msp20I TGGCCA 1 cut(s) 798
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 2 cut(s) 24, 997
MspR9I CCNGG 4 cut(s) 45, 240, 277, 418
MunI CAATTG 1 cut(s) 714
MvaI CCWGG 4 cut(s) 45, 240, 277, 418
MwoI GCNNNNNNNGC 2 cut(s) 464, 804
NcoI CCATGG 1 cut(s) 565
NdeII GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
NlaIII CATG 3 cut(s) 104, 569, 1030
NmuCI GTSAC 3 cut(s) 535, 936, 1003
PasI CCCWGGG 1 cut(s) 44
PdmI GAANNNNTTC 4 cut(s) 376, 520, 783, 1061
PflMI CCANNNNNTGG 1 cut(s) 282
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 3 cut(s) 326, 460, 806
PleI GAGTC 1 cut(s) 1000
PpsI GAGTC 1 cut(s) 1000
Psp6I CCWGG 4 cut(s) 43, 238, 275, 416
PspGI CCWGG 4 cut(s) 43, 238, 275, 416
PstI CTGCAG 1 cut(s) 1050
PstNI CAGNNNCTG 1 cut(s) 1045
SaqAI TTAA 4 cut(s) 228, 288, 296, 552
SatI GCNGC 3 cut(s) 325, 459, 805
Sau3AI GATC 8 cut(s) 385, 507, 818, 853, 976, 1205, 1209, 1244
SchI GAGTC 1 cut(s) 1000
ScrFI CCNGG 4 cut(s) 45, 240, 277, 418
SduI GDGCHC 3 cut(s) 148, 731, 1272
SfaNI GCATC 2 cut(s) 147, 1082
SfcI CTRYAG 2 cut(s) 189, 1046
SmlI CTYRAG 3 cut(s) 551, 752, 1213
SmoI CTYRAG 3 cut(s) 551, 752, 1213
SsiI CCGC 3 cut(s) 104, 162, 280
SspMI CTAG 1 cut(s) 480
StyD4I CCNGG 4 cut(s) 43, 238, 275, 416
StyI CCWWGG 2 cut(s) 544, 565
TaaI ACNGT 2 cut(s) 1140, 1175
TaiI ACGT 3 cut(s) 172, 747, 1005
TaqI TCGA 2 cut(s) 5, 1208
Tru1I TTAA 4 cut(s) 228, 288, 296, 552
Tru9I TTAA 4 cut(s) 228, 288, 296, 552
TscAI CASTG 5 cut(s) 148, 686, 806, 1180, 1284
TseFI GTSAC 3 cut(s) 535, 936, 1003
TseI GCWGC 3 cut(s) 324, 458, 804
Tsp45I GTSAC 3 cut(s) 535, 936, 1003
TspDTI ATGAA 2 cut(s) 1153, 1213
TspGWI ACGGA 3 cut(s) 247, 326, 601
TspRI CASTG 5 cut(s) 148, 686, 806, 1180, 1284
Van91I CCANNNNNTGG 1 cut(s) 282
Vha464I CTTAAG 1 cut(s) 551
XagI CCTNNNNNAGG 1 cut(s) 899
XapI RAATTY 1 cut(s) 317
XmnI GAANNNNTTC 4 cut(s) 376, 520, 783, 1061
XspI CTAG 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.