Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002920

Physical Location & Seq

Genomic Coordinates Forward (+)

18503498 .. 18507325

Gene Structure 3828 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00178860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGATTTTTACCCGGGGGTCAATATATGAAAACCCCAAAGAAGCAGGCCTCTTTTTGTCTCTTGGTCGGCATGTGGATGTCTACTTTCCTCCTAGCAAGAGGTCTCGCATCAGTGCTCCATTTGTTTTCAATCAAGAGAGTTTTGAACAGAAGAAGCAGGTGTCTATCAATGTTCTTCCAGAAGAATGTCTCTTTGAGATCTTTAAACGGTTGCCTGGAGGTGAGGAAAGGAGTGCCTGTGCTTGTGTTTCCAAGCAGTGGCTTACTCTTTTGAGCAATATCCATAGAGATGAGTTCTGTAACAAGAACCCAAACGTGTCTGTGAAGTCTGAGGATGAGATCACTGGAGATGAGGCTGAAGACCAGGAGATTGAGAGTTGTGGATATCTTTCCAGGAGCTTGGAAGGCAAGAAGGCAACAGATGTTAGACTTTCTGCCATTGCTGTTGGAACTGCCAGTCGAGGAGGATTGGGCAAGCTTATGATTCGTGGAAGCAATTCTGCCCGTCCCGTGACAAACATTGGTCTTAAGGCGATTTCCCATGGCTGTCCTTCACTAAGGGTTCTATCTCTGTGGAACGTGTCGTCAGTTGGGGATGAAGGCTTGTGCGAGATTGCAAAAAGGTGTCATCTGTTAGAGAAGCTTGACCTCTCCCTGTGTCCTGCAATATCTGATAAGGGTTTGGCTGCAATTGCAAGGAGCTGTCCCAATTTGACCGACATAACAGTTGAGTCCTGTTCTAACGTTGGGAATGAAGGTCTGCAGGCTATTGGAAAGTGCTGCCCCAATCTGAAATCTGTTTCAATCAAAAATTGCCCTCTTGTTGGGGATCAGGGAATTGCTAGTTTGGTATCTTCTACCTCTGATGTCCTGGAAAAGGTGAAGCTTCAGACATTGACCATAACTGATGTGTCTCTTGCTGTTATTGGACACTATGGCAAGGCTGTTACCGATCTTGTCCTTACCAATCTCCCCAATGTGTGCGAGAGGGGATTCTGGGTCATGGGCAATGGTCATGGGCTGCAGAAGTTGAAGTCCTTTACTGTTACATCCTGTCAAGGTGCAACAGACACTGGACTTGAAGCAGTAGCAAAAGGTTGCCCAAATTTGAAACAGTTCTGCCTGCGCAAGTGTCTATACATATCTGACAGTGGGTTGGTATCTTTTTGCAAAGCAGCAGGATCTCTCGAGAGCCTTCATTTGGAGGAGTGCCACAGGATCACCCAACATGGATTTTTTGGTGTTCTTTCAAACAGTGGTGCAAAGCTGAAGGCTCTAGCTTTTGTTTACTGCCTGGGACTTAAAGACCTGAACTTGGGATTGCCTGTGGTGTCCCCATGCGAATCTCTTCGCTCACTGTCCATCCGTAACTGCCCTGGGTTTGGAAATTCTGGGCTGGCGGTTTTGGGTCAACTCTGCCCTCAACTGCAGCATGTCGACTTCAGTGGGCTTGAAGGAATGACTGATGCTGGATTTCTCTCACTGCTTAGGAGCACTGAGGCTGGTCTGGTTAAGGTTAATCTTAGTGGTTGTGTGAATCTGACGGACAAAGCGGTGTCCACCATGGCTGAGCTTCATGGTTGGACTTTGGAAGTGGTGAATCTTGAAGGTTGTAGAATGATCAGTGATTCAGGCTTGGTAGCAATTGGAGAGAACTGCCCATTGCTTAGTGATCTTGATATCTCAAGGTGTGCAATCACTGATTTTGGAATTGCATCCCTGGCCCTTGCAGACCAGCTAAATCTTCAGATCCTCTCTGTGTCGGGCTGCTCTTATGTATCAGACAAGAGTTTACCTGCCTTGGTAAAAATGGGTGAGACACTTCTAGGTTTGAATCTTCAGCACTGCAATGCCATCAGCAGCAGCACCGTTGACCGTCTTGTGGAGCAGCTATGGCGTTGTGATATCCTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009723 GO:0009725 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0019005 GO:0019538 GO:0019941 GO:0023051 GO:0023057 GO:0030163 GO:0031461 GO:0032991 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902531 GO:1902532 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

F-box F-box-like LRR_6

Protein Analysis

638

Amino Acids

68.28

Weight (kDa)

6.11

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7885	PF25372	167 - 389	3.1e-20	Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885	PF25372	381 - 471	4.2e-07	Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885	PF25372	464 - 630	8.3e-13	Leucine Rich Repeat Domain of unknown function (DUF7885)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25490 AT5G25350
fragaria_vesca	FvH4_1g03130 FvH4_2g29100
malus_domestica	MD02G1030300.v1.1 MD08G1150200.v1.1 MD15G1171800.v1.1
prunus_persica	Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.7G244300_v2.0.a1
pyrus_communis	pycom02g02520 pycom08g12590 pycom15g11280 pycom15g15330
rosa_chinensis	RchiOBHm_Chr2g0088251 RchiOBHm_Chr6g0297981
rosa_laevigata	RLG00000011546 RLG00000015936
rosa_multiflora	Rmu_sc0002800.1_g000025 Rmu_sc0004235.1_g000046
rosa_roxburghii	Rroxscaffold_2G00152810 Rroxscaffold_7G00170030 Rroxscaffold_7G00178860
rosa_rugosa	Rorug01G0482400 Rorug06G0277500
rosa_samantha	Rh2AG037400 Rh2BG036600 Rh2CG037700 Rh2DG037100 Rh6AG388000 Rh6BG396200 Rh6CG402200 Rh6DG388400
rosa_wichuraiana	Rw0G007080 Rw2G002940 Rw6G033860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	148
Acc16I	TGCGCA	1 cut(s)	1127
Acc36I	ACCTGC	2 cut(s)	148, 1804
AccB7I	CCANNNNNTGG	1 cut(s)	258
AccI	GTMKAC	2 cut(s)	81, 1437
AciI	CCGC	2 cut(s)	1400, 1553
AclI	AACGTT	1 cut(s)	744
AclWI	GGATC	4 cut(s)	837, 1189, 1226, 1744
AcsI	RAATTY	2 cut(s)	1105, 1387
AcuI	CTGAAG	6 cut(s)	378, 872, 1289, 1426, 1730, 1823
AfiI	CCNNNNNNNGG	7 cut(s)	258, 824, 877, 1201, 1315, 1382, 1882
AflII	CTTAAG	1 cut(s)	527
AflIII	ACRYGT	2 cut(s)	315, 579
AjnI	CCWGG	7 cut(s)	214, 363, 392, 870, 1293, 1375, 1719
Alw21I	GWGCWC	2 cut(s)	118, 1496
Alw26I	GTCTC	5 cut(s)	63, 108, 194, 918, 1811
AlwI	GGATC	4 cut(s)	837, 1189, 1226, 1744
AlwNI	CAGNNNCTG	1 cut(s)	1073
Ama87I	CYCGRG	2 cut(s)	12, 1187
AoxI	GGCC	2 cut(s)	46, 1722
ApeKI	GCWGC	9 cut(s)	686, 780, 1021, 1175, 1429, 1767, 1860, 1863, 1888
ApoI	RAATTY	2 cut(s)	1105, 1387
Asp700I	GAANNNNTTC	3 cut(s)	496, 1115, 1347
AspLEI	GCGC	1 cut(s)	1128
AspS9I	GGNCC	1 cut(s)	1723
AsuC2I	CCSGG	2 cut(s)	13, 14
AsuHPI	GGTGA	5 cut(s)	233, 892, 1213, 1609, 1826
AvaI	CYCGRG	2 cut(s)	12, 1187
BbsI	GAAGAC	1 cut(s)	366
Bbv12I	GWGCWC	2 cut(s)	118, 1496
BbvI	GCAGC	9 cut(s)	673, 767, 1008, 1187, 1441, 1754, 1872, 1875, 1900
BccI	CCATC	2 cut(s)	1370, 1862
BciT130I	CCWGG	7 cut(s)	216, 365, 394, 872, 1295, 1377, 1721
BclI	TGATCA	1 cut(s)	1620
BcnI	CCSGG	2 cut(s)	13, 14
BcoDI	GTCTC	5 cut(s)	63, 108, 194, 918, 1811
BfaI	CTAG	5 cut(s)	93, 843, 1277, 1826, 1915
BfmI	CTRYAG	3 cut(s)	761, 1022, 1427
BfrI	CTTAAG	1 cut(s)	527
BfuAI	ACCTGC	2 cut(s)	148, 1804
BglII	AGATCT	1 cut(s)	198
BisI	GCNGC	9 cut(s)	687, 781, 1022, 1176, 1430, 1768, 1861, 1864, 1889
BlpI	GCTNAGC	1 cut(s)	1569
BlsI	GCNGC	9 cut(s)	688, 782, 1023, 1177, 1431, 1769, 1862, 1865, 1890
Bme1390I	CCNGG	9 cut(s)	13, 14, 216, 365, 394, 872, 1295, 1377, 1721
BmeT110I	CYCGRG	2 cut(s)	12, 1187
BmgT120I	GGNCC	1 cut(s)	1723
BmrFI	CCNGG	9 cut(s)	13, 14, 216, 365, 394, 872, 1295, 1377, 1721
BmsI	GCATC	3 cut(s)	117, 1456, 1724
BpiI	GAAGAC	1 cut(s)	366
BpmI	CTGGAG	2 cut(s)	237, 366
Bpu10I	CCTNAGC	1 cut(s)	1487
Bpu1102I	GCTNAGC	1 cut(s)	1569
BpuEI	CTTGAG	1 cut(s)	1669
BpuMI	CCSGG	2 cut(s)	13, 14
BsaI	GGTCTC	1 cut(s)	108
BsaJI	CCNNGG	9 cut(s)	12, 13, 541, 1294, 1375, 1376, 1563, 1719, 1800
BsaXI	ACNNNNNCTCC	2 cut(s)	223, 253
Bsc4I	CCNNNNNNNGG	7 cut(s)	258, 824, 877, 1201, 1315, 1382, 1882
Bse1I	ACTGG	3 cut(s)	349, 456, 1078
Bse3DI	GCAATG	4 cut(s)	438, 1015, 1661, 1855
BseBI	CCWGG	7 cut(s)	216, 365, 394, 872, 1295, 1377, 1721
BseDI	CCNNGG	9 cut(s)	12, 13, 541, 1294, 1375, 1376, 1563, 1719, 1800
BseGI	GGATG	6 cut(s)	82, 340, 601, 1049, 1362, 1715
BseLI	CCNNNNNNNGG	7 cut(s)	258, 824, 877, 1201, 1315, 1382, 1882
BseMI	GCAATG	4 cut(s)	438, 1015, 1661, 1855
BseMII	CTCAG	3 cut(s)	321, 1488, 1560
BseNI	ACTGG	3 cut(s)	349, 456, 1078
BseRI	GAGGAG	2 cut(s)	477, 1220
BseXI	GCAGC	9 cut(s)	673, 767, 1008, 1187, 1441, 1754, 1872, 1875, 1900
BshFI	GGCC	2 cut(s)	48, 1724
BsiHKAI	GWGCWC	2 cut(s)	118, 1496
BsiHKCI	CYCGRG	2 cut(s)	12, 1187
BsiSI	CCGG	1 cut(s)	13
BslFI	GGGAC	4 cut(s)	492, 690, 1311, 1318
BslI	CCNNNNNNNGG	7 cut(s)	258, 824, 877, 1201, 1315, 1382, 1882
BsmAI	GTCTC	5 cut(s)	63, 108, 194, 918, 1811
BsmFI	GGGAC	4 cut(s)	492, 690, 1311, 1318
BsnI	GGCC	2 cut(s)	48, 1724
Bso31I	GGTCTC	1 cut(s)	108
BsoBI	CYCGRG	2 cut(s)	12, 1187
Bsp1286I	GDGCHC	2 cut(s)	118, 1496
Bsp143I	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
Bsp1720I	GCTNAGC	1 cut(s)	1569
Bsp19I	CCATGG	2 cut(s)	541, 1563
BspACI	CCGC	2 cut(s)	1400, 1553
BspANI	GGCC	2 cut(s)	48, 1724
BspCNI	CTCAG	3 cut(s)	322, 1489, 1561
BspMAI	CTGCAG	3 cut(s)	765, 1026, 1431
BspMI	ACCTGC	2 cut(s)	148, 1804
BspPI	GGATC	4 cut(s)	837, 1189, 1226, 1744
BspTI	CTTAAG	1 cut(s)	527
BspTNI	GGTCTC	1 cut(s)	108
BsrDI	GCAATG	4 cut(s)	438, 1015, 1661, 1855
BsrI	ACTGG	3 cut(s)	349, 456, 1078
BssECI	CCNNGG	9 cut(s)	12, 13, 541, 1294, 1375, 1376, 1563, 1719, 1800
BssMI	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
BssT1I	CCWWGG	3 cut(s)	541, 1563, 1800
Bst2UI	CCWGG	7 cut(s)	216, 365, 394, 872, 1295, 1377, 1721
Bst4CI	ACNGT	9 cut(s)	210, 727, 1045, 1116, 1151, 1256, 1359, 1870, 1877
Bst6I	CTCTTC	1 cut(s)	1353
BstAFI	CTTAAG	1 cut(s)	527
BstC8I	GCNNGC	5 cut(s)	46, 476, 765, 1124, 1398
BstDEI	CTNAG	7 cut(s)	330, 557, 1487, 1497, 1523, 1569, 1667
BstDSI	CCRYGG	2 cut(s)	541, 1563
BstENI	CCTNNNNNAGG	1 cut(s)	875
BstF5I	GGATG	6 cut(s)	82, 340, 601, 1049, 1362, 1715
BstHHI	GCGC	1 cut(s)	1128
BstKTI	GATC	9 cut(s)	201, 342, 832, 955, 1184, 1221, 1623, 1675, 1752
BstMAI	GTCTC	5 cut(s)	63, 108, 194, 918, 1811
BstMBI	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
BstMWI	GCNNNNNNNGC	4 cut(s)	405, 692, 1721, 1894
BstNI	CCWGG	7 cut(s)	216, 365, 394, 872, 1295, 1377, 1721
BstNSI	RCATGY	2 cut(s)	74, 1436
BstSCI	CCNGG	9 cut(s)	11, 12, 214, 363, 392, 870, 1293, 1375, 1719
BstSFI	CTRYAG	3 cut(s)	761, 1022, 1427
BstV1I	GCAGC	9 cut(s)	673, 767, 1008, 1187, 1441, 1754, 1872, 1875, 1900
BstV2I	GAAGAC	1 cut(s)	366
BstX2I	RGATCY	3 cut(s)	198, 1181, 1749
BstXI	CCANNNNNNTGG	1 cut(s)	400
BstYI	RGATCY	3 cut(s)	198, 1181, 1749
BsuRI	GGCC	2 cut(s)	48, 1724
BtgI	CCRYGG	2 cut(s)	541, 1563
BtsCI	GGATG	6 cut(s)	82, 340, 601, 1049, 1362, 1715
BtsI	GCAGTG	3 cut(s)	263, 1481, 1843
BveI	ACCTGC	2 cut(s)	148, 1804
Cac8I	GCNNGC	5 cut(s)	46, 476, 765, 1124, 1398
CaiI	CAGNNNCTG	1 cut(s)	1073
CfoI	GCGC	1 cut(s)	1128
Cfr13I	GGNCC	1 cut(s)	1723
Cfr9I	CCCGGG	1 cut(s)	12
CviAII	CATG	9 cut(s)	71, 542, 1003, 1016, 1229, 1338, 1433, 1564, 1577
DdeI	CTNAG	7 cut(s)	330, 557, 1487, 1497, 1523, 1569, 1667
DpnI	GATC	9 cut(s)	200, 341, 831, 954, 1183, 1220, 1622, 1674, 1751
DpnII	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
DraI	TTTAAA	1 cut(s)	205
Eam1104I	CTCTTC	1 cut(s)	1353
EarI	CTCTTC	1 cut(s)	1353
Eco130I	CCWWGG	3 cut(s)	541, 1563, 1800
Eco147I	AGGCCT	1 cut(s)	48
Eco31I	GGTCTC	1 cut(s)	108
Eco32I	GATATC	3 cut(s)	386, 1681, 1906
Eco57I	CTGAAG	6 cut(s)	378, 872, 1289, 1426, 1730, 1823
Eco88I	CYCGRG	2 cut(s)	12, 1187
EcoNI	CCTNNNNNAGG	1 cut(s)	875
EcoRII	CCWGG	7 cut(s)	214, 363, 392, 870, 1293, 1375, 1719
EcoRV	GATATC	3 cut(s)	386, 1681, 1906
EcoT14I	CCWWGG	3 cut(s)	541, 1563, 1800
ErhI	CCWWGG	3 cut(s)	541, 1563, 1800
FaeI	CATG	9 cut(s)	74, 545, 1006, 1019, 1232, 1341, 1436, 1567, 1580
FaqI	GGGAC	4 cut(s)	492, 690, 1311, 1318
FatI	CATG	9 cut(s)	70, 541, 1002, 1015, 1228, 1337, 1432, 1563, 1576
FbaI	TGATCA	1 cut(s)	1620
FblI	GTMKAC	2 cut(s)	81, 1437
Fnu4HI	GCNGC	9 cut(s)	687, 781, 1022, 1176, 1430, 1768, 1861, 1864, 1889
FokI	GGATG	6 cut(s)	89, 347, 608, 1036, 1349, 1702
Fsp4HI	GCNGC	9 cut(s)	687, 781, 1022, 1176, 1430, 1768, 1861, 1864, 1889
FspBI	CTAG	5 cut(s)	93, 843, 1277, 1826, 1915
FspI	TGCGCA	1 cut(s)	1127
GlaI	GCGC	1 cut(s)	1127
GluI	GCNGC	9 cut(s)	687, 781, 1022, 1176, 1430, 1768, 1861, 1864, 1889
GsuI	CTGGAG	2 cut(s)	237, 366
HaeIII	GGCC	2 cut(s)	48, 1724
HapII	CCGG	1 cut(s)	13
HhaI	GCGC	1 cut(s)	1128
Hin1II	CATG	9 cut(s)	74, 545, 1006, 1019, 1232, 1341, 1436, 1567, 1580
Hin6I	GCGC	1 cut(s)	1126
HinP1I	GCGC	1 cut(s)	1126
HincII	GTYRAC	3 cut(s)	1412, 1438, 1873
HindII	GTYRAC	3 cut(s)	1412, 1438, 1873
HindIII	AAGCTT	3 cut(s)	476, 641, 884
HinfI	GANTC	8 cut(s)	484, 731, 993, 1343, 1537, 1600, 1628, 1834
HpaII	CCGG	1 cut(s)	13
HphI	GGTGA	5 cut(s)	233, 892, 1213, 1609, 1826
Hpy166II	GTNNAC	7 cut(s)	82, 1288, 1412, 1438, 1560, 1793, 1873
Hpy188I	TCNGA	9 cut(s)	331, 673, 792, 865, 891, 1147, 1542, 1749, 1783
Hpy188III	TCNNGA	6 cut(s)	134, 179, 1187, 1189, 1604, 1676
Hpy8I	GTNNAC	7 cut(s)	82, 1288, 1412, 1438, 1560, 1793, 1873
HpyAV	CCTTC	9 cut(s)	398, 406, 561, 593, 749, 1205, 1264, 1448, 1601
HpyCH4III	ACNGT	9 cut(s)	210, 727, 1045, 1116, 1151, 1256, 1359, 1870, 1877
HpyCH4IV	ACGT	3 cut(s)	315, 579, 744
HpyF10VI	GCNNNNNNNGC	4 cut(s)	405, 692, 1721, 1894
HpyF3I	CTNAG	7 cut(s)	330, 557, 1487, 1497, 1523, 1569, 1667
HpySE526I	ACGT	3 cut(s)	315, 579, 744
Hsp92II	CATG	9 cut(s)	74, 545, 1006, 1019, 1232, 1341, 1436, 1567, 1580
HspAI	GCGC	1 cut(s)	1126
Ksp22I	TGATCA	1 cut(s)	1620
Kzo9I	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
LmnI	GCTCC	5 cut(s)	121, 396, 699, 1491, 1885
Lsp1109I	GCAGC	9 cut(s)	673, 767, 1008, 1187, 1441, 1754, 1872, 1875, 1900
LweI	GCATC	3 cut(s)	117, 1456, 1724
MaeI	CTAG	5 cut(s)	93, 843, 1277, 1826, 1915
MaeII	ACGT	3 cut(s)	315, 579, 744
MaeIII	GTNAC	5 cut(s)	299, 511, 946, 1045, 1367
MalI	GATC	9 cut(s)	200, 341, 831, 954, 1183, 1220, 1622, 1674, 1751
MboI	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
MboII	GAAGA	8 cut(s)	163, 167, 194, 371, 846, 1340, 1736, 1829
MfeI	CAATTG	2 cut(s)	690, 1644
MflI	RGATCY	3 cut(s)	198, 1181, 1749
MhlI	GDGCHC	2 cut(s)	118, 1496
MluCI	AATT	9 cut(s)	496, 690, 709, 811, 837, 1105, 1387, 1644, 1710
MlyI	GAGTC	1 cut(s)	740
MmeI	TCCRAC	2 cut(s)	427, 1562
MroXI	GAANNNNTTC	3 cut(s)	496, 1115, 1347
MseI	TTAA	5 cut(s)	204, 528, 1302, 1512, 1518
MslI	CAYNNNNRTG	3 cut(s)	75, 288, 1848
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	1 cut(s)	13
MspR9I	CCNGG	9 cut(s)	13, 14, 216, 365, 394, 872, 1295, 1377, 1721
MunI	CAATTG	2 cut(s)	690, 1644
MvaI	CCWGG	7 cut(s)	216, 365, 394, 872, 1295, 1377, 1721
MwoI	GCNNNNNNNGC	4 cut(s)	405, 692, 1721, 1894
NciI	CCSGG	2 cut(s)	13, 14
NcoI	CCATGG	2 cut(s)	541, 1563
NdeII	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
NlaIII	CATG	9 cut(s)	74, 545, 1006, 1019, 1232, 1341, 1436, 1567, 1580
NmuCI	GTSAC	1 cut(s)	511
NsbI	TGCGCA	1 cut(s)	1127
NspI	RCATGY	2 cut(s)	74, 1436
PaeR7I	CTCGAG	1 cut(s)	1187
PaqCI	CACCTGC	1 cut(s)	148
PasI	CCCWGGG	1 cut(s)	1376
PceI	AGGCCT	1 cut(s)	48
PdmI	GAANNNNTTC	3 cut(s)	496, 1115, 1347
PfeI	GAWTC	7 cut(s)	484, 993, 1343, 1537, 1600, 1628, 1834
PflMI	CCANNNNNTGG	1 cut(s)	258
PfoI	TCCNGGA	2 cut(s)	392, 870
PkrI	GCNGC	9 cut(s)	688, 782, 1023, 1177, 1431, 1769, 1862, 1865, 1890
PleI	GAGTC	1 cut(s)	739
PpsI	GAGTC	1 cut(s)	739
Psp1406I	AACGTT	1 cut(s)	744
Psp6I	CCWGG	7 cut(s)	214, 363, 392, 870, 1293, 1375, 1719
PspGI	CCWGG	7 cut(s)	214, 363, 392, 870, 1293, 1375, 1719
PspPI	GGNCC	1 cut(s)	1723
PstI	CTGCAG	3 cut(s)	765, 1026, 1431
PstNI	CAGNNNCTG	1 cut(s)	1073
PsuI	RGATCY	3 cut(s)	198, 1181, 1749
RseI	CAYNNNNRTG	3 cut(s)	75, 288, 1848
SalI	GTCGAC	1 cut(s)	1436
SaqAI	TTAA	5 cut(s)	204, 528, 1302, 1512, 1518
SatI	GCNGC	9 cut(s)	687, 781, 1022, 1176, 1430, 1768, 1861, 1864, 1889
Sau3AI	GATC	9 cut(s)	198, 339, 829, 952, 1181, 1218, 1620, 1672, 1749
Sau96I	GGNCC	1 cut(s)	1723
SchI	GAGTC	1 cut(s)	740
ScrFI	CCNGG	9 cut(s)	13, 14, 216, 365, 394, 872, 1295, 1377, 1721
SduI	GDGCHC	2 cut(s)	118, 1496
SfaNI	GCATC	3 cut(s)	117, 1456, 1724
SfcI	CTRYAG	3 cut(s)	761, 1022, 1427
Sfr274I	CTCGAG	1 cut(s)	1187
SlaI	CTCGAG	1 cut(s)	1187
SmaI	CCCGGG	1 cut(s)	14
SmiMI	CAYNNNNRTG	3 cut(s)	75, 288, 1848
SmlI	CTYRAG	3 cut(s)	527, 1187, 1684
SmoI	CTYRAG	3 cut(s)	527, 1187, 1684
Sse9I	AATT	9 cut(s)	496, 690, 709, 811, 837, 1105, 1387, 1644, 1710
SseBI	AGGCCT	1 cut(s)	48
SsiI	CCGC	2 cut(s)	1400, 1553
SspMI	CTAG	5 cut(s)	93, 843, 1277, 1826, 1915
StuI	AGGCCT	1 cut(s)	48
StyD4I	CCNGG	9 cut(s)	11, 12, 214, 363, 392, 870, 1293, 1375, 1719
StyI	CCWWGG	3 cut(s)	541, 1563, 1800
TaaI	ACNGT	9 cut(s)	210, 727, 1045, 1116, 1151, 1256, 1359, 1870, 1877
TaiI	ACGT	3 cut(s)	318, 582, 747
TaqI	TCGA	3 cut(s)	460, 1188, 1437
TaqII	GACCGA	1 cut(s)	731
TasI	AATT	9 cut(s)	496, 690, 709, 811, 837, 1105, 1387, 1644, 1710
TfiI	GAWTC	7 cut(s)	484, 993, 1343, 1537, 1600, 1628, 1834
Tru1I	TTAA	5 cut(s)	204, 528, 1302, 1512, 1518
Tru9I	TTAA	5 cut(s)	204, 528, 1302, 1512, 1518
TseFI	GTSAC	1 cut(s)	511
TseI	GCWGC	9 cut(s)	686, 780, 1021, 1175, 1429, 1767, 1860, 1863, 1888
Tsp45I	GTSAC	1 cut(s)	511
TspDTI	ATGAA	5 cut(s)	42, 612, 768, 1187, 1565
TspGWI	ACGGA	2 cut(s)	1355, 1559
TspMI	CCCGGG	1 cut(s)	12
Van91I	CCANNNNNTGG	1 cut(s)	258
Vha464I	CTTAAG	1 cut(s)	527
XagI	CCTNNNNNAGG	1 cut(s)	875
XapI	RAATTY	2 cut(s)	1105, 1387
XceI	RCATGY	2 cut(s)	74, 1436
XhoI	CTCGAG	1 cut(s)	1187
XmaI	CCCGGG	1 cut(s)	12
XmiI	GTMKAC	2 cut(s)	81, 1437
XmnI	GAANNNNTTC	3 cut(s)	496, 1115, 1347
XspI	CTAG	5 cut(s)	93, 843, 1277, 1826, 1915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.