Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0002920

Physical Location & Seq

Genomic Coordinates Reverse (-)

58110852 .. 58115232

Gene Structure 4381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG388400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGTCTAAGCTCTTCGGATTCGCTGGTAGTGATGATTTTTTCCCAGGGGGGTCAATATATGAAAACCCCAAAGAAGCAGGCCTCTTTTTGTCTCTTGGTCGGCATGTGGATGTCTACTTTCCTCCTAGCAAGAGGTCTCGCATCAGTGCTCCATTTGTTTTCAATCAACAGAGTTTTGAACAGAAGAAGCAGGTGTCTATCAATGTTCTTCCAGAAGAATGTCTCTTTGAGATCTTTAAACGGTTGCCTGGAGGTGAGGAAAGGAGTGCCTGTGCTTGTGTTTCCAAGCAGTGGCTTACTCTTTTGAGCAATATCCATAGAGATGAGTTCTGTAACAAGAACACAAACCTATCTGTGAAGTCTCAGGATGAGATCACTGGAGATGAGGCTGAAGACCAGGAGATTGAGAGTTGTGGATATCTTTCCAGGAGCTTGGAAGGCAAGAAGGCAACAGATGTTAGACTGTCTGCCATTGCTGTTGGAACTGCCAGTCGAGGAGGATTGGGCAAGCTTATGATTCGTGGAAGCAATTCTGCCCGTCCCGTGACAAACATTGGCCTTAAGGCGATTTCCCATGGCTGTCCTTCACTAAGGGTTCTATCTCTGTGGAACGTGTCATCAGTTGGGGATGAAGGCTTGTGCGAGATTGCAAAAAGGTGTCATCTGTTAGAGAAGCTTGACCTCTCCCTGTGTCCTGCAATATCTGATAAGGGTTTGGCTGCAATTGCAAGGAGCTGTCCCAATTTGACCGATTTAACACTTGAGTCCTGTTTTAACGTTGGGAATGAAGGTCTGCAAGCTATTGGAAAGTGCTGCCCCAATCTGAAATCTGTTTCAATCAAAAATTGCCCTCTTGTTGGGGATCAGGGAATTGCTAGTTTGGTATCTTCTTCCTCTGATGTCCTGGAAAAGGTGAAGCTTCAGACATTGACCATAACTGATGTGTCTCTTGCTGTTATTGGACACTATGGCAAGGCTGTTACCGATCTTGTCCTTACCAATCTCCCCAATGTGTGCGAGAGGGGATTCTGGGTCATGGGCAATGGTCATGGGCTGCAGAAGTTGAAGTCCTTTACTGTTACATCCTGTCAAGGTGCAACAGACACTGGACTTGAAGCAGTAGCAAAAGGTTGCCCAAATTTGAAACAGTTCTGCCTGCGCAAGTGTCTATACATATCTGACAGTGGGTTGGTATCTTTTTGCAAAGCAGCAGGATCTCTCGAGAGCCTTCATTTGGAGGAGTGCCACAGGATCACCCAATATGGATTTTTTGGTGTTCTTTCAAACAGTGGTGCAAAGTTGAAGGCTCTAGCTTTTGTTTACTGCCTGGGACTTAAAGACCTGAACTTGGGATTGCCTGTGGTGTCTCCATGTGAATCTCTTCGCTCACTGTCCATCCGTAACTGCCCTGGGTTTGGAAATTCTGGGCTGGCGGTTTTGGGTCAACTCTGCCCTCAACTGCAGCATGTTGACTTCAGTGGGCTTGAAGGAATGACCGATGCTGGATTTCTGTCACTGCTTAGGAGCACTGAGGCTGGTCTGGTAAAGGTTAATCTTAGTGGTTGTGTGAATCTGACAGACAAGGCAGTGTCCACCATGGCTGAGCTTCATGGTTGGACTTTGGAAGTGGTGAATCTTGAAGGTTGTAGAATGATCAGCGATTCAGGCTTGGTAGCAATTGGAGAGAACTGCCCATTGCTTAGTGATCTTGATATCTCAAGGTGTGCAATCACTGATTTTGGAATTGCATCCCTGGCCCTTGCAGACCAGCTAAATCTTCAGATCCTCTCTGTGTCCGGCTGCTCTTATGTATCAGACAAGAGTTTGCCTGCCTTGGTAGAAATGGGTGAGACACTTCTAGGTTTGAATCTTCAGCACTGCAATGCCATCAGCAGCAGCACCGTTGACCGTCTTTTGGAGCAGCTATGGCGTTGTGATATCCTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009723 GO:0009725 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0019005 GO:0019538 GO:0019941 GO:0023051 GO:0023057 GO:0030163 GO:0031461 GO:0032991 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902531 GO:1902532 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

F-box F-box-like LRR_6

Protein Analysis

649

Amino Acids

69.46

Weight (kDa)

5.86

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7885	PF25372	178 - 400	5.3e-20	Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885	PF25372	392 - 482	9.2e-07	Leucine Rich Repeat Domain of unknown function (DUF7885)
DUF7885	PF25372	475 - 640	1.9e-12	Leucine Rich Repeat Domain of unknown function (DUF7885)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25490 AT5G25350
fragaria_vesca	FvH4_1g03130 FvH4_2g29100
malus_domestica	MD02G1030300.v1.1 MD08G1150200.v1.1 MD15G1171800.v1.1
prunus_persica	Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.1G480700_v2.0.a1 Prupe.7G244300_v2.0.a1
pyrus_communis	pycom02g02520 pycom08g12590 pycom15g11280 pycom15g15330
rosa_chinensis	RchiOBHm_Chr2g0088251 RchiOBHm_Chr6g0297981
rosa_laevigata	RLG00000011546 RLG00000015936
rosa_multiflora	Rmu_sc0002800.1_g000025 Rmu_sc0004235.1_g000046
rosa_roxburghii	Rroxscaffold_2G00152810 Rroxscaffold_7G00170030 Rroxscaffold_7G00178860
rosa_rugosa	Rorug01G0482400 Rorug06G0277500
rosa_samantha	Rh2AG037400 Rh2BG036600 Rh2CG037700 Rh2DG037100 Rh6AG388000 Rh6BG396200 Rh6CG402200 Rh6DG388400
rosa_wichuraiana	Rw0G007080 Rw2G002940 Rw6G033860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	181
Acc16I	TGCGCA	1 cut(s)	1160
Acc36I	ACCTGC	1 cut(s)	181
AccB7I	CCANNNNNTGG	1 cut(s)	291
AccI	GTMKAC	1 cut(s)	114
AciI	CCGC	1 cut(s)	1433
AclI	AACGTT	1 cut(s)	777
AclWI	GGATC	4 cut(s)	870, 1222, 1259, 1777
AcsI	RAATTY	2 cut(s)	1138, 1420
AcuI	CTGAAG	5 cut(s)	411, 905, 1459, 1763, 1856
AfiI	CCNNNNNNNGG	7 cut(s)	291, 857, 910, 1234, 1348, 1415, 1915
AflII	CTTAAG	1 cut(s)	560
AflIII	ACRYGT	1 cut(s)	612
AjnI	CCWGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
Alw21I	GWGCWC	2 cut(s)	151, 1529
Alw26I	GTCTC	7 cut(s)	96, 141, 227, 366, 951, 1371, 1844
AlwI	GGATC	4 cut(s)	870, 1222, 1259, 1777
AlwNI	CAGNNNCTG	1 cut(s)	1106
Ama87I	CYCGRG	1 cut(s)	1220
AoxI	GGCC	3 cut(s)	79, 556, 1755
ApeKI	GCWGC	9 cut(s)	719, 813, 1054, 1208, 1462, 1800, 1893, 1896, 1921
ApoI	RAATTY	2 cut(s)	1138, 1420
Asp700I	GAANNNNTTC	3 cut(s)	529, 1148, 1380
AspLEI	GCGC	1 cut(s)	1161
AspS9I	GGNCC	1 cut(s)	1756
AsuHPI	GGTGA	5 cut(s)	266, 925, 1246, 1642, 1859
AvaI	CYCGRG	1 cut(s)	1220
BbsI	GAAGAC	1 cut(s)	399
Bbv12I	GWGCWC	2 cut(s)	151, 1529
BbvI	GCAGC	9 cut(s)	706, 800, 1041, 1220, 1474, 1787, 1905, 1908, 1933
BccI	CCATC	2 cut(s)	1403, 1895
BciT130I	CCWGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
BclI	TGATCA	1 cut(s)	1653
BcoDI	GTCTC	7 cut(s)	96, 141, 227, 366, 951, 1371, 1844
BfaI	CTAG	5 cut(s)	126, 876, 1310, 1859, 1948
BfmI	CTRYAG	2 cut(s)	1055, 1460
BfrI	CTTAAG	1 cut(s)	560
BfuAI	ACCTGC	1 cut(s)	181
BglII	AGATCT	1 cut(s)	231
BisI	GCNGC	9 cut(s)	720, 814, 1055, 1209, 1463, 1801, 1894, 1897, 1922
BlpI	GCTNAGC	1 cut(s)	1602
BlsI	GCNGC	9 cut(s)	721, 815, 1056, 1210, 1464, 1802, 1895, 1898, 1923
Bme1390I	CCNGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
BmeT110I	CYCGRG	1 cut(s)	1220
BmgT120I	GGNCC	1 cut(s)	1756
BmrFI	CCNGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
BmsI	GCATC	3 cut(s)	150, 1489, 1757
BpiI	GAAGAC	1 cut(s)	399
BpmI	CTGGAG	2 cut(s)	270, 399
Bpu10I	CCTNAGC	1 cut(s)	1520
Bpu1102I	GCTNAGC	1 cut(s)	1602
BpuEI	CTTGAG	2 cut(s)	782, 1702
BsaI	GGTCTC	1 cut(s)	141
BsaJI	CCNNGG	9 cut(s)	43, 44, 574, 1327, 1408, 1409, 1596, 1752, 1833
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	7 cut(s)	291, 857, 910, 1234, 1348, 1415, 1915
Bse1I	ACTGG	3 cut(s)	382, 489, 1111
Bse3DI	GCAATG	4 cut(s)	471, 1048, 1694, 1888
BseBI	CCWGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
BseDI	CCNNGG	9 cut(s)	43, 44, 574, 1327, 1408, 1409, 1596, 1752, 1833
BseGI	GGATG	6 cut(s)	115, 373, 634, 1082, 1395, 1748
BseLI	CCNNNNNNNGG	7 cut(s)	291, 857, 910, 1234, 1348, 1415, 1915
BseMI	GCAATG	4 cut(s)	471, 1048, 1694, 1888
BseMII	CTCAG	3 cut(s)	377, 1521, 1593
BseNI	ACTGG	3 cut(s)	382, 489, 1111
BseRI	GAGGAG	2 cut(s)	510, 1253
BseXI	GCAGC	9 cut(s)	706, 800, 1041, 1220, 1474, 1787, 1905, 1908, 1933
BshFI	GGCC	3 cut(s)	81, 558, 1757
BsiHKAI	GWGCWC	2 cut(s)	151, 1529
BsiHKCI	CYCGRG	1 cut(s)	1220
BsiSI	CCGG	1 cut(s)	1797
BslFI	GGGAC	3 cut(s)	525, 723, 1344
BslI	CCNNNNNNNGG	7 cut(s)	291, 857, 910, 1234, 1348, 1415, 1915
BsmAI	GTCTC	7 cut(s)	96, 141, 227, 366, 951, 1371, 1844
BsmFI	GGGAC	3 cut(s)	525, 723, 1344
BsnI	GGCC	3 cut(s)	81, 558, 1757
Bso31I	GGTCTC	1 cut(s)	141
BsoBI	CYCGRG	1 cut(s)	1220
Bsp1286I	GDGCHC	2 cut(s)	151, 1529
Bsp143I	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
Bsp1720I	GCTNAGC	1 cut(s)	1602
Bsp19I	CCATGG	2 cut(s)	574, 1596
BspACI	CCGC	1 cut(s)	1433
BspANI	GGCC	3 cut(s)	81, 558, 1757
BspCNI	CTCAG	3 cut(s)	376, 1522, 1594
BspMAI	CTGCAG	2 cut(s)	1059, 1464
BspMI	ACCTGC	1 cut(s)	181
BspPI	GGATC	4 cut(s)	870, 1222, 1259, 1777
BspQI	GCTCTTC	1 cut(s)	17
BspTI	CTTAAG	1 cut(s)	560
BspTNI	GGTCTC	1 cut(s)	141
BsrDI	GCAATG	4 cut(s)	471, 1048, 1694, 1888
BsrI	ACTGG	3 cut(s)	382, 489, 1111
BssECI	CCNNGG	9 cut(s)	43, 44, 574, 1327, 1408, 1409, 1596, 1752, 1833
BssMI	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
BssT1I	CCWWGG	3 cut(s)	574, 1596, 1833
Bst2UI	CCWGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
Bst4CI	ACNGT	9 cut(s)	243, 465, 1078, 1149, 1184, 1289, 1392, 1903, 1910
Bst6I	CTCTTC	2 cut(s)	17, 1386
BstAFI	CTTAAG	1 cut(s)	560
BstC8I	GCNNGC	6 cut(s)	79, 509, 798, 1157, 1431, 1830
BstDEI	CTNAG	8 cut(s)	6, 363, 590, 1520, 1530, 1556, 1602, 1700
BstDSI	CCRYGG	2 cut(s)	574, 1596
BstENI	CCTNNNNNAGG	1 cut(s)	908
BstF5I	GGATG	6 cut(s)	115, 373, 634, 1082, 1395, 1748
BstHHI	GCGC	1 cut(s)	1161
BstKTI	GATC	9 cut(s)	234, 375, 865, 988, 1217, 1254, 1656, 1708, 1785
BstMAI	GTCTC	7 cut(s)	96, 141, 227, 366, 951, 1371, 1844
BstMBI	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
BstMWI	GCNNNNNNNGC	5 cut(s)	438, 725, 1665, 1754, 1927
BstNI	CCWGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
BstNSI	RCATGY	2 cut(s)	107, 1469
BstSCI	CCNGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
BstSFI	CTRYAG	2 cut(s)	1055, 1460
BstV1I	GCAGC	9 cut(s)	706, 800, 1041, 1220, 1474, 1787, 1905, 1908, 1933
BstV2I	GAAGAC	1 cut(s)	399
BstX2I	RGATCY	3 cut(s)	231, 1214, 1782
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	3 cut(s)	231, 1214, 1782
BsuRI	GGCC	3 cut(s)	81, 558, 1757
BtgI	CCRYGG	2 cut(s)	574, 1596
BtsCI	GGATG	6 cut(s)	115, 373, 634, 1082, 1395, 1748
BtsI	GCAGTG	4 cut(s)	296, 1514, 1593, 1876
BveI	ACCTGC	1 cut(s)	181
Cac8I	GCNNGC	6 cut(s)	79, 509, 798, 1157, 1431, 1830
CaiI	CAGNNNCTG	1 cut(s)	1106
CfoI	GCGC	1 cut(s)	1161
Cfr13I	GGNCC	1 cut(s)	1756
CviAII	CATG	8 cut(s)	104, 575, 1036, 1049, 1371, 1466, 1597, 1610
DdeI	CTNAG	8 cut(s)	6, 363, 590, 1520, 1530, 1556, 1602, 1700
DpnI	GATC	9 cut(s)	233, 374, 864, 987, 1216, 1253, 1655, 1707, 1784
DpnII	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
DraI	TTTAAA	1 cut(s)	238
Eam1104I	CTCTTC	2 cut(s)	17, 1386
EarI	CTCTTC	2 cut(s)	17, 1386
Eco130I	CCWWGG	3 cut(s)	574, 1596, 1833
Eco147I	AGGCCT	1 cut(s)	81
Eco31I	GGTCTC	1 cut(s)	141
Eco32I	GATATC	3 cut(s)	419, 1714, 1939
Eco57I	CTGAAG	5 cut(s)	411, 905, 1459, 1763, 1856
Eco88I	CYCGRG	1 cut(s)	1220
EcoNI	CCTNNNNNAGG	1 cut(s)	908
EcoRII	CCWGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
EcoRV	GATATC	3 cut(s)	419, 1714, 1939
EcoT14I	CCWWGG	3 cut(s)	574, 1596, 1833
ErhI	CCWWGG	3 cut(s)	574, 1596, 1833
FaeI	CATG	8 cut(s)	107, 578, 1039, 1052, 1374, 1469, 1600, 1613
FaqI	GGGAC	3 cut(s)	525, 723, 1344
FatI	CATG	8 cut(s)	103, 574, 1035, 1048, 1370, 1465, 1596, 1609
FbaI	TGATCA	1 cut(s)	1653
FblI	GTMKAC	1 cut(s)	114
Fnu4HI	GCNGC	9 cut(s)	720, 814, 1055, 1209, 1463, 1801, 1894, 1897, 1922
FokI	GGATG	6 cut(s)	122, 380, 641, 1069, 1382, 1735
Fsp4HI	GCNGC	9 cut(s)	720, 814, 1055, 1209, 1463, 1801, 1894, 1897, 1922
FspBI	CTAG	5 cut(s)	126, 876, 1310, 1859, 1948
FspI	TGCGCA	1 cut(s)	1160
GlaI	GCGC	1 cut(s)	1160
GluI	GCNGC	9 cut(s)	720, 814, 1055, 1209, 1463, 1801, 1894, 1897, 1922
GsuI	CTGGAG	2 cut(s)	270, 399
HaeIII	GGCC	3 cut(s)	81, 558, 1757
HapII	CCGG	1 cut(s)	1797
HhaI	GCGC	1 cut(s)	1161
Hin1II	CATG	8 cut(s)	107, 578, 1039, 1052, 1374, 1469, 1600, 1613
Hin6I	GCGC	1 cut(s)	1159
HinP1I	GCGC	1 cut(s)	1159
HincII	GTYRAC	3 cut(s)	1445, 1471, 1906
HindII	GTYRAC	3 cut(s)	1445, 1471, 1906
HindIII	AAGCTT	3 cut(s)	509, 674, 917
HinfI	GANTC	9 cut(s)	18, 517, 764, 1026, 1376, 1570, 1633, 1661, 1867
HpaII	CCGG	1 cut(s)	1797
HphI	GGTGA	5 cut(s)	266, 925, 1246, 1642, 1859
Hpy166II	GTNNAC	6 cut(s)	115, 1321, 1445, 1471, 1593, 1906
Hpy188I	TCNGA	9 cut(s)	17, 706, 825, 898, 924, 1180, 1575, 1782, 1816
Hpy188III	TCNNGA	6 cut(s)	212, 365, 1220, 1222, 1637, 1709
Hpy8I	GTNNAC	6 cut(s)	115, 1321, 1445, 1471, 1593, 1906
HpyAV	CCTTC	9 cut(s)	431, 439, 594, 626, 782, 1238, 1297, 1481, 1634
HpyCH4III	ACNGT	9 cut(s)	243, 465, 1078, 1149, 1184, 1289, 1392, 1903, 1910
HpyCH4IV	ACGT	2 cut(s)	612, 777
HpyF10VI	GCNNNNNNNGC	5 cut(s)	438, 725, 1665, 1754, 1927
HpyF3I	CTNAG	8 cut(s)	6, 363, 590, 1520, 1530, 1556, 1602, 1700
HpySE526I	ACGT	2 cut(s)	612, 777
Hsp92II	CATG	8 cut(s)	107, 578, 1039, 1052, 1374, 1469, 1600, 1613
HspAI	GCGC	1 cut(s)	1159
Ksp22I	TGATCA	1 cut(s)	1653
Kzo9I	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
LguI	GCTCTTC	1 cut(s)	17
LmnI	GCTCC	5 cut(s)	154, 429, 732, 1524, 1918
Lsp1109I	GCAGC	9 cut(s)	706, 800, 1041, 1220, 1474, 1787, 1905, 1908, 1933
LweI	GCATC	3 cut(s)	150, 1489, 1757
MaeI	CTAG	5 cut(s)	126, 876, 1310, 1859, 1948
MaeII	ACGT	2 cut(s)	612, 777
MaeIII	GTNAC	6 cut(s)	332, 544, 979, 1078, 1400, 1512
MalI	GATC	9 cut(s)	233, 374, 864, 987, 1216, 1253, 1655, 1707, 1784
MboI	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
MfeI	CAATTG	2 cut(s)	723, 1677
MflI	RGATCY	3 cut(s)	231, 1214, 1782
MhlI	GDGCHC	2 cut(s)	151, 1529
MluCI	AATT	9 cut(s)	529, 723, 742, 844, 870, 1138, 1420, 1677, 1743
MlyI	GAGTC	1 cut(s)	773
MmeI	TCCRAC	2 cut(s)	460, 1595
MroXI	GAANNNNTTC	3 cut(s)	529, 1148, 1380
MseI	TTAA	6 cut(s)	237, 561, 755, 774, 1335, 1551
MslI	CAYNNNNRTG	3 cut(s)	108, 321, 1881
MspCI	CTTAAG	1 cut(s)	560
MspI	CCGG	1 cut(s)	1797
MspR9I	CCNGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
MunI	CAATTG	2 cut(s)	723, 1677
MvaI	CCWGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
MwoI	GCNNNNNNNGC	5 cut(s)	438, 725, 1665, 1754, 1927
NcoI	CCATGG	2 cut(s)	574, 1596
NdeII	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
NlaIII	CATG	8 cut(s)	107, 578, 1039, 1052, 1374, 1469, 1600, 1613
NmuCI	GTSAC	2 cut(s)	544, 1512
NsbI	TGCGCA	1 cut(s)	1160
NspI	RCATGY	2 cut(s)	107, 1469
PaeR7I	CTCGAG	1 cut(s)	1220
PaqCI	CACCTGC	1 cut(s)	181
PasI	CCCWGGG	2 cut(s)	44, 1409
PceI	AGGCCT	1 cut(s)	81
PciSI	GCTCTTC	1 cut(s)	17
PdmI	GAANNNNTTC	3 cut(s)	529, 1148, 1380
PfeI	GAWTC	8 cut(s)	18, 517, 1026, 1376, 1570, 1633, 1661, 1867
PflMI	CCANNNNNTGG	1 cut(s)	291
PfoI	TCCNGGA	2 cut(s)	425, 903
PkrI	GCNGC	9 cut(s)	721, 815, 1056, 1210, 1464, 1802, 1895, 1898, 1923
PleI	GAGTC	1 cut(s)	772
PpsI	GAGTC	1 cut(s)	772
Psp1406I	AACGTT	1 cut(s)	777
Psp6I	CCWGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
PspGI	CCWGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
PspPI	GGNCC	1 cut(s)	1756
PstI	CTGCAG	2 cut(s)	1059, 1464
PstNI	CAGNNNCTG	1 cut(s)	1106
PsuI	RGATCY	3 cut(s)	231, 1214, 1782
RseI	CAYNNNNRTG	3 cut(s)	108, 321, 1881
SapI	GCTCTTC	1 cut(s)	17
SaqAI	TTAA	6 cut(s)	237, 561, 755, 774, 1335, 1551
SatI	GCNGC	9 cut(s)	720, 814, 1055, 1209, 1463, 1801, 1894, 1897, 1922
Sau3AI	GATC	9 cut(s)	231, 372, 862, 985, 1214, 1251, 1653, 1705, 1782
Sau96I	GGNCC	1 cut(s)	1756
SchI	GAGTC	1 cut(s)	773
ScrFI	CCNGG	8 cut(s)	45, 249, 398, 427, 905, 1328, 1410, 1754
SduI	GDGCHC	2 cut(s)	151, 1529
SfaNI	GCATC	3 cut(s)	150, 1489, 1757
SfcI	CTRYAG	2 cut(s)	1055, 1460
Sfr274I	CTCGAG	1 cut(s)	1220
SlaI	CTCGAG	1 cut(s)	1220
SmiMI	CAYNNNNRTG	3 cut(s)	108, 321, 1881
SmlI	CTYRAG	4 cut(s)	560, 761, 1220, 1717
SmoI	CTYRAG	4 cut(s)	560, 761, 1220, 1717
Sse9I	AATT	9 cut(s)	529, 723, 742, 844, 870, 1138, 1420, 1677, 1743
SseBI	AGGCCT	1 cut(s)	81
SsiI	CCGC	1 cut(s)	1433
SspMI	CTAG	5 cut(s)	126, 876, 1310, 1859, 1948
StuI	AGGCCT	1 cut(s)	81
StyD4I	CCNGG	8 cut(s)	43, 247, 396, 425, 903, 1326, 1408, 1752
StyI	CCWWGG	3 cut(s)	574, 1596, 1833
TaaI	ACNGT	9 cut(s)	243, 465, 1078, 1149, 1184, 1289, 1392, 1903, 1910
TaiI	ACGT	2 cut(s)	615, 780
TaqI	TCGA	2 cut(s)	493, 1221
TaqII	GACCGA	2 cut(s)	764, 1511
TasI	AATT	9 cut(s)	529, 723, 742, 844, 870, 1138, 1420, 1677, 1743
TfiI	GAWTC	8 cut(s)	18, 517, 1026, 1376, 1570, 1633, 1661, 1867
Tru1I	TTAA	6 cut(s)	237, 561, 755, 774, 1335, 1551
Tru9I	TTAA	6 cut(s)	237, 561, 755, 774, 1335, 1551
TseFI	GTSAC	2 cut(s)	544, 1512
TseI	GCWGC	9 cut(s)	719, 813, 1054, 1208, 1462, 1800, 1893, 1896, 1921
Tsp45I	GTSAC	2 cut(s)	544, 1512
TspDTI	ATGAA	5 cut(s)	75, 645, 801, 1220, 1598
TspGWI	ACGGA	1 cut(s)	1388
Van91I	CCANNNNNTGG	1 cut(s)	291
Vha464I	CTTAAG	1 cut(s)	560
XagI	CCTNNNNNAGG	1 cut(s)	908
XapI	RAATTY	2 cut(s)	1138, 1420
XceI	RCATGY	2 cut(s)	107, 1469
XhoI	CTCGAG	1 cut(s)	1220
XmiI	GTMKAC	1 cut(s)	114
XmnI	GAANNNNTTC	3 cut(s)	529, 1148, 1380
XspI	CTAG	5 cut(s)	126, 876, 1310, 1859, 1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.