pycom15g13460
HSP70 Family

heat shock

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
9168225 .. 9169460
1236 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g13460.1

Sequence Viewer

Length: 1236 bp
ATGGTGAATCACTTCGTGGCGGAGTTCCGGAGGAAGCATAAGAAGGATATTAGCGGAAACGCCAGGGCGTTGCGGCGGCTGAGGACAGCATGCGAACGGGCGAAGAGGACTCTATCTTCCACCACCCAGACGGCAATCGAAATTGATTCCTTGTACGAAGGTATCGATTTCTACTCGACGATTACTCGCGCGAGGTTCGAGGAATTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCCGTCGAGAAATGTCTGAGGGATGCGAAGATGGACAAGTCGCAGATTCATGAGGTAGTTCTTGTCGGCGGGTCGACAAGAATCCCGAAAGTCCAGCAGCTTTTGCAGGACTTTTTTAACGGGAAGGAACTTTGTAAGAGTATAAACCCCGACGAGGCTGTCGCTTACGGCGCGGCGGTGCAAGCGGCGATCTTGACCGGCGAAGGGGATCAGAAAGTGCAGGACTTGCTGCTGCTCGATGTCACGCCGCTCAGTCTCGGTCTCGAGACCGCCGGCGGGGTTATGACTGTGCTGATTCCGAGGAACACGACAATTCCGACAAAGAAAGAGCAGATCTTTTCGACTTATTCGGATAATCAACCCGGAGTTTTGATCCAGGTTTATGAAGGAGAGAGAGCGCGAACGAAGGACAACAACTTGTTGGGGAAGTTTGAGCTCTCGGGCATCCCTCCGGCTCCGAGAGGCGTGCCGCAGATCAATGTGGTCTTCGACATTGATGCGAATGGGATTCTGAATGTGTCGGCTGAGGACAAGACGGCAGGGGTGAAGAACAAGATTACGATTACGAATGACAAGGGACGACTGAGCAAGGAGGAGATCGAGAAGATGGTGCAGGATGCGGAGAAGTACAGGGCGGAGGACGAGGAGGTGAAGAGGAAGGTGGATGCAAAGAATGCGTTGGAGAATTATGCGTACAACATGAGGAACACCGTGAGGGATGATAAATTTGCCGGGAAATTGGACCCCGCGGACAAGGAGAAGATCGAGAAGGCGGTGGACGAGGTGATCAATTGGCTGGAGGGGAACCAGTTGGCGGAAGTTGATGAGTTTGAGCACAAGTTGAAGGAGCTGGAGGGCCTGTGCAACCCTATTATTGCGAAGATGTACCAGGGTGCCGGCGGTGCTGGAGGCGGTATGCCGATGGGAGATGACATGCCTGGTGGCGCTTCCACTGGCTCCGCCAATGGACCCGGCCCCAAGATTGAGGAGGTGGATTGA
Functional Annotation

Protein Analysis

412

Amino Acids

45.38

Weight (kDa)

5.34

Isoelectric Point (pI)

33.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 376 2.7e-137 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 395
AccB1I GGYRCC 1 cut(s) 1130
AccBSI CCGCTC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 311
AccII CGCG 5 cut(s) 189, 191, 410, 637, 986
AccIII TCCGGA 1 cut(s) 27
AclWI GGATC 2 cut(s) 453, 604
AcsI RAATTY 1 cut(s) 962
AdeI CACNNNGTG 1 cut(s) 16
AfaI GTAC 4 cut(s) 155, 866, 932, 1124
AfiI CCNNNNNNNGG 4 cut(s) 391, 441, 513, 1051
AgsI TTSAA 2 cut(s) 208, 1081
AjnI CCWGG 4 cut(s) 62, 612, 1125, 1174
AluBI AGCT 3 cut(s) 337, 673, 1087
AluI AGCT 3 cut(s) 337, 673, 1087
Alw21I GWGCWC 2 cut(s) 675, 1074
Alw26I GTCTC 3 cut(s) 497, 497, 503
AlwI GGATC 2 cut(s) 453, 604
Ama87I CYCGRG 2 cut(s) 500, 676
Aor13HI TCCGGA 1 cut(s) 27
AoxI GGCC 2 cut(s) 1093, 1210
ApeKI GCWGC 3 cut(s) 334, 466, 469
ApoI RAATTY 1 cut(s) 962
Asp700I GAANNNNTTC 1 cut(s) 11
AspLEI GCGC 4 cut(s) 191, 410, 637, 1184
AspS9I GGNCC 4 cut(s) 979, 1093, 1205, 1211
AsuC2I CCSGG 3 cut(s) 600, 970, 1209
AsuHPI GGTGA 4 cut(s) 16, 793, 898, 1033
AvaI CYCGRG 2 cut(s) 500, 676
AvaII GGWCC 2 cut(s) 979, 1205
BaeI ACNNNNGTAYC 2 cut(s) 145, 178
BanI GGYRCC 1 cut(s) 1130
BanII GRGCYC 2 cut(s) 240, 675
BbsI GAAGAC 1 cut(s) 715
Bbv12I GWGCWC 2 cut(s) 675, 1074
BbvCI CCTCAGC 2 cut(s) 80, 762
BbvI GCAGC 3 cut(s) 346, 453, 456
BccI CCATC 3 cut(s) 262, 838, 1153
BceAI ACGGC 3 cut(s) 147, 421, 789
BcgI CGANNNNNNTGC 4 cut(s) 685, 716, 719, 750
BciT130I CCWGG 4 cut(s) 64, 614, 1127, 1176
BclI TGATCA 1 cut(s) 1023
BcnI CCSGG 3 cut(s) 600, 970, 1209
BcoDI GTCTC 3 cut(s) 497, 497, 503
BfoI RGCGCY 1 cut(s) 1185
BglII AGATCT 1 cut(s) 570
BisI GCNGC 9 cut(s) 74, 77, 335, 411, 423, 467, 470, 485, 707
BlsI GCNGC 9 cut(s) 75, 78, 336, 412, 424, 468, 471, 486, 708
Bme1390I CCNGG 7 cut(s) 64, 600, 614, 970, 1127, 1176, 1209
Bme18I GGWCC 2 cut(s) 979, 1205
BmeT110I CYCGRG 2 cut(s) 500, 676
BmgT120I GGNCC 4 cut(s) 979, 1093, 1205, 1211
BmiI GGNNCC 8 cut(s) 237, 693, 981, 1043, 1132, 1195, 1207, 1213
BmrFI CCNGG 7 cut(s) 64, 600, 614, 970, 1127, 1176, 1209
BmsI GCATC 5 cut(s) 250, 690, 724, 844, 892
BpiI GAAGAC 1 cut(s) 715
BpmI CTGGAG 3 cut(s) 1055, 1109, 1164
Bpu10I CCTNAGC 2 cut(s) 80, 762
BpuMI CCSGG 3 cut(s) 600, 970, 1209
Bsa29I ATCGAT 1 cut(s) 165
BsaI GGTCTC 2 cut(s) 497, 503
BsaJI CCNNGG 4 cut(s) 63, 536, 984, 1126
BsaWI WCCGGW 1 cut(s) 27
BsaXI ACNNNNNCTCC 2 cut(s) 1082, 1112
Bsc4I CCNNNNNNNGG 4 cut(s) 391, 441, 513, 1051
Bse118I RCCGGY 3 cut(s) 434, 509, 1133
Bse1I ACTGG 2 cut(s) 1045, 1195
BseAI TCCGGA 1 cut(s) 27
BseBI CCWGG 4 cut(s) 64, 614, 1127, 1176
BseCI ATCGAT 1 cut(s) 165
BseDI CCNNGG 4 cut(s) 63, 536, 984, 1126
BseGI GGATG 5 cut(s) 265, 681, 859, 907, 961
BseLI CCNNNNNNNGG 4 cut(s) 391, 441, 513, 1051
BseMII CTCAG 5 cut(s) 71, 245, 502, 753, 812
BseNI ACTGG 2 cut(s) 1045, 1195
BseRI GAGGAG 2 cut(s) 845, 896
BseXI GCAGC 3 cut(s) 346, 453, 456
BsgI GTGCAG 2 cut(s) 476, 869
Bsh1236I CGCG 5 cut(s) 189, 191, 410, 637, 986
BshFI GGCC 2 cut(s) 1095, 1212
BshNI GGYRCC 1 cut(s) 1130
BshVI ATCGAT 1 cut(s) 165
BsiHKAI GWGCWC 2 cut(s) 675, 1074
BsiHKCI CYCGRG 2 cut(s) 500, 676
BsiSI CCGG 8 cut(s) 28, 435, 510, 600, 689, 969, 1134, 1209
BslFI GGGAC 1 cut(s) 828
BslI CCNNNNNNNGG 4 cut(s) 391, 441, 513, 1051
BsmAI GTCTC 3 cut(s) 497, 497, 503
BsmFI GGGAC 1 cut(s) 828
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 2 cut(s) 1095, 1212
Bso31I GGTCTC 2 cut(s) 497, 503
BsoBI CYCGRG 2 cut(s) 500, 676
Bsp1286I GDGCHC 3 cut(s) 240, 675, 1074
Bsp13I TCCGGA 1 cut(s) 27
Bsp143I GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
BspANI GGCC 2 cut(s) 1095, 1212
BspCNI CTCAG 5 cut(s) 72, 246, 501, 754, 813
BspDI ATCGAT 1 cut(s) 165
BspEI TCCGGA 1 cut(s) 27
BspFNI CGCG 5 cut(s) 189, 191, 410, 637, 986
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 8 cut(s) 237, 693, 981, 1043, 1132, 1195, 1207, 1213
BspPI GGATC 2 cut(s) 453, 604
BspT107I GGYRCC 1 cut(s) 1130
BspTNI GGTCTC 2 cut(s) 497, 503
BsrBI CCGCTC 1 cut(s) 487
BsrFI RCCGGY 3 cut(s) 434, 509, 1133
BsrI ACTGG 2 cut(s) 1045, 1195
BssAI RCCGGY 3 cut(s) 434, 509, 1133
BssECI CCNNGG 4 cut(s) 63, 536, 984, 1126
BssMI GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
Bst2UI CCWGG 4 cut(s) 64, 614, 1127, 1176
Bst4CI ACNGT 2 cut(s) 526, 949
Bst6I CTCTTC 2 cut(s) 98, 884
BstAPI GCANNNNNTGC 3 cut(s) 340, 463, 911
BstC8I GCNNGC 5 cut(s) 91, 420, 511, 704, 1135
BstDEI CTNAG 5 cut(s) 80, 254, 488, 762, 821
BstDSI CCRYGG 1 cut(s) 984
BstF5I GGATG 5 cut(s) 265, 681, 859, 907, 961
BstFNI CGCG 5 cut(s) 189, 191, 410, 637, 986
BstH2I RGCGCY 1 cut(s) 1185
BstHHI GCGC 4 cut(s) 191, 410, 637, 1184
BstKTI GATC 8 cut(s) 429, 448, 573, 612, 714, 837, 1002, 1026
BstMAI GTCTC 3 cut(s) 497, 497, 503
BstMBI GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
BstMWI GCNNNNNNNGC 6 cut(s) 340, 407, 419, 463, 911, 1139
BstNI CCWGG 4 cut(s) 64, 614, 1127, 1176
BstNSI RCATGY 2 cut(s) 93, 1174
BstSCI CCNGG 7 cut(s) 62, 598, 612, 968, 1125, 1174, 1207
BstUI CGCG 5 cut(s) 189, 191, 410, 637, 986
BstV1I GCAGC 3 cut(s) 346, 453, 456
BstV2I GAAGAC 1 cut(s) 715
BstX2I RGATCY 1 cut(s) 570
BstYI RGATCY 1 cut(s) 570
Bsu15I ATCGAT 1 cut(s) 165
BsuRI GGCC 2 cut(s) 1095, 1212
BsuTUI ATCGAT 1 cut(s) 165
BtgI CCRYGG 1 cut(s) 984
BtsCI GGATG 5 cut(s) 265, 681, 859, 907, 961
BtsIMutI CAGTG 1 cut(s) 1188
Cac8I GCNNGC 5 cut(s) 91, 420, 511, 704, 1135
CciI TCATGA 1 cut(s) 286
CfoI GCGC 4 cut(s) 191, 410, 637, 1184
Cfr10I RCCGGY 3 cut(s) 434, 509, 1133
Cfr13I GGNCC 4 cut(s) 979, 1093, 1205, 1211
Cfr42I CCGCGG 1 cut(s) 987
ClaI ATCGAT 1 cut(s) 165
Csp6I GTAC 4 cut(s) 154, 865, 931, 1123
CviAII CATG 5 cut(s) 90, 211, 287, 937, 1171
CviQI GTAC 4 cut(s) 154, 865, 931, 1123
DdeI CTNAG 5 cut(s) 80, 254, 488, 762, 821
DpnI GATC 8 cut(s) 428, 447, 572, 611, 713, 836, 1001, 1025
DpnII GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
DraIII CACNNNGTG 1 cut(s) 16
DrdI GACNNNNNNGTC 1 cut(s) 395
DseDI GACNNNNNNGTC 1 cut(s) 395
Eam1104I CTCTTC 2 cut(s) 98, 884
EarI CTCTTC 2 cut(s) 98, 884
EciI GGCGGA 4 cut(s) 35, 887, 1067, 1186
Ecl136II GAGCTC 1 cut(s) 673
Eco24I GRGCYC 2 cut(s) 240, 675
Eco31I GGTCTC 2 cut(s) 497, 503
Eco47I GGWCC 2 cut(s) 979, 1205
Eco53kI GAGCTC 1 cut(s) 673
Eco88I CYCGRG 2 cut(s) 500, 676
EcoICRI GAGCTC 1 cut(s) 673
EcoO109I RGGNCCY 1 cut(s) 1093
EcoRII CCWGG 4 cut(s) 62, 612, 1125, 1174
EcoT38I GRGCYC 2 cut(s) 240, 675
FaeI CATG 5 cut(s) 93, 214, 290, 940, 1174
FaqI GGGAC 1 cut(s) 828
FatI CATG 5 cut(s) 89, 210, 286, 936, 1170
FauI CCCGC 3 cut(s) 299, 506, 991
FbaI TGATCA 1 cut(s) 1023
FblI GTMKAC 1 cut(s) 311
Fnu4HI GCNGC 9 cut(s) 74, 77, 335, 411, 423, 467, 470, 485, 707
FokI GGATG 5 cut(s) 272, 668, 866, 914, 968
FriOI GRGCYC 2 cut(s) 240, 675
Fsp4HI GCNGC 9 cut(s) 74, 77, 335, 411, 423, 467, 470, 485, 707
GlaI GCGC 4 cut(s) 190, 409, 636, 1183
GluI GCNGC 9 cut(s) 74, 77, 335, 411, 423, 467, 470, 485, 707
GsuI CTGGAG 3 cut(s) 1055, 1109, 1164
HaeII RGCGCY 1 cut(s) 1185
HaeIII GGCC 2 cut(s) 1095, 1212
HapII CCGG 8 cut(s) 28, 435, 510, 600, 689, 969, 1134, 1209
HhaI GCGC 4 cut(s) 191, 410, 637, 1184
Hin1II CATG 5 cut(s) 93, 214, 290, 940, 1174
Hin6I GCGC 4 cut(s) 189, 408, 635, 1182
HinP1I GCGC 4 cut(s) 189, 408, 635, 1182
HincII GTYRAC 1 cut(s) 312
HindII GTYRAC 1 cut(s) 312
HinfI GANTC 7 cut(s) 7, 109, 146, 283, 318, 532, 745
HpaII CCGG 8 cut(s) 28, 435, 510, 600, 689, 969, 1134, 1209
HphI GGTGA 4 cut(s) 16, 793, 898, 1033
Hpy166II GTNNAC 2 cut(s) 312, 1015
Hpy188I TCNGA 7 cut(s) 255, 450, 537, 555, 589, 696, 750
Hpy8I GTNNAC 2 cut(s) 312, 1015
Hpy99I CGWCG 3 cut(s) 181, 245, 392
HpyAV CCTTC 9 cut(s) 37, 152, 355, 434, 617, 637, 889, 1000, 1075
HpyCH4III ACNGT 2 cut(s) 526, 949
HpyCH4V TGCA 6 cut(s) 343, 418, 457, 850, 905, 1101
HpyF10VI GCNNNNNNNGC 6 cut(s) 340, 407, 419, 463, 911, 1139
HpyF3I CTNAG 5 cut(s) 80, 254, 488, 762, 821
Hsp92II CATG 5 cut(s) 93, 214, 290, 940, 1174
HspAI GCGC 4 cut(s) 189, 408, 635, 1182
Kpn2I TCCGGA 1 cut(s) 27
KroI GCCGGC 2 cut(s) 509, 1133
KroNI GCCGGC 2 cut(s) 511, 1135
Ksp22I TGATCA 1 cut(s) 1023
KspI CCGCGG 1 cut(s) 987
Kzo9I GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
LmnI GCTCC 4 cut(s) 235, 697, 1084, 1199
Lsp1109I GCAGC 3 cut(s) 346, 453, 456
LweI GCATC 5 cut(s) 250, 690, 724, 844, 892
MaeIII GTNAC 1 cut(s) 478
MalI GATC 8 cut(s) 428, 447, 572, 611, 713, 836, 1001, 1025
MbiI CCGCTC 1 cut(s) 487
MboI GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
MboII GAAGA 9 cut(s) 108, 115, 277, 715, 796, 853, 901, 1009, 1129
MfeI CAATTG 1 cut(s) 1027
MflI RGATCY 1 cut(s) 570
MhlI GDGCHC 3 cut(s) 240, 675, 1074
MluCI AATT 7 cut(s) 141, 203, 549, 922, 962, 974, 1027
MlyI GAGTC 1 cut(s) 103
MmeI TCCRAC 2 cut(s) 578, 897
MreI CGCCGGCG 1 cut(s) 509
MroI TCCGGA 1 cut(s) 27
MroNI GCCGGC 2 cut(s) 509, 1133
MroXI GAANNNNTTC 1 cut(s) 11
MseI TTAA 1 cut(s) 354
MspA1I CMGCKG 1 cut(s) 986
MspI CCGG 8 cut(s) 28, 435, 510, 600, 689, 969, 1134, 1209
MspR9I CCNGG 7 cut(s) 64, 600, 614, 970, 1127, 1176, 1209
MunI CAATTG 1 cut(s) 1027
Mva1269I GAATGC 1 cut(s) 916
MvaI CCWGG 4 cut(s) 64, 614, 1127, 1176
MvnI CGCG 5 cut(s) 189, 191, 410, 637, 986
MwoI GCNNNNNNNGC 6 cut(s) 340, 407, 419, 463, 911, 1139
NaeI GCCGGC 2 cut(s) 511, 1135
NciI CCSGG 3 cut(s) 600, 970, 1209
NdeII GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
NgoMIV GCCGGC 2 cut(s) 509, 1133
NlaIII CATG 5 cut(s) 93, 214, 290, 940, 1174
NlaIV GGNNCC 8 cut(s) 237, 693, 981, 1043, 1132, 1195, 1207, 1213
NmuCI GTSAC 1 cut(s) 478
NspI RCATGY 2 cut(s) 93, 1174
PaeI GCATGC 1 cut(s) 93
PaeR7I CTCGAG 1 cut(s) 500
PagI TCATGA 1 cut(s) 286
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 551
PctI GAATGC 1 cut(s) 916
PdiI GCCGGC 2 cut(s) 511, 1135
PdmI GAANNNNTTC 1 cut(s) 11
PfeI GAWTC 6 cut(s) 7, 146, 283, 318, 532, 745
PkrI GCNGC 9 cut(s) 75, 78, 336, 412, 424, 468, 471, 486, 708
PleI GAGTC 1 cut(s) 103
PpsI GAGTC 1 cut(s) 103
Psp124BI GAGCTC 1 cut(s) 675
Psp6I CCWGG 4 cut(s) 62, 612, 1125, 1174
PspGI CCWGG 4 cut(s) 62, 612, 1125, 1174
PspN4I GGNNCC 8 cut(s) 237, 693, 981, 1043, 1132, 1195, 1207, 1213
PspPI GGNCC 4 cut(s) 979, 1093, 1205, 1211
PsuI RGATCY 1 cut(s) 570
RsaI GTAC 4 cut(s) 155, 866, 932, 1124
RsaNI GTAC 4 cut(s) 154, 865, 931, 1123
SacI GAGCTC 1 cut(s) 675
SacII CCGCGG 1 cut(s) 987
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 1 cut(s) 354
SatI GCNGC 9 cut(s) 74, 77, 335, 411, 423, 467, 470, 485, 707
Sau3AI GATC 8 cut(s) 426, 445, 570, 609, 711, 834, 999, 1023
Sau96I GGNCC 4 cut(s) 979, 1093, 1205, 1211
SchI GAGTC 1 cut(s) 103
ScrFI CCNGG 7 cut(s) 64, 600, 614, 970, 1127, 1176, 1209
SduI GDGCHC 3 cut(s) 240, 675, 1074
SfaNI GCATC 5 cut(s) 250, 690, 724, 844, 892
Sfr274I CTCGAG 1 cut(s) 500
Sfr303I CCGCGG 1 cut(s) 987
SgrAI CRCCGGYG 1 cut(s) 509
SgrBI CCGCGG 1 cut(s) 987
SinI GGWCC 2 cut(s) 979, 1205
SlaI CTCGAG 1 cut(s) 500
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
SphI GCATGC 1 cut(s) 93
Sse9I AATT 7 cut(s) 141, 203, 549, 922, 962, 974, 1027
SstI GAGCTC 1 cut(s) 675
StyD4I CCNGG 7 cut(s) 62, 598, 612, 968, 1125, 1174, 1207
TaaI ACNGT 2 cut(s) 526, 949
TaqII GACCGA 1 cut(s) 485
TasI AATT 7 cut(s) 141, 203, 549, 922, 962, 974, 1027
TatI WGTACW 1 cut(s) 864
TauI GCSGC 6 cut(s) 76, 79, 413, 425, 487, 709
TfiI GAWTC 6 cut(s) 7, 146, 283, 318, 532, 745
Tru1I TTAA 1 cut(s) 354
Tru9I TTAA 1 cut(s) 354
TscAI CASTG 1 cut(s) 1195
TseFI GTSAC 1 cut(s) 478
TseI GCWGC 3 cut(s) 334, 466, 469
Tsp45I GTSAC 1 cut(s) 478
TspDTI ATGAA 2 cut(s) 275, 636
TspRI CASTG 1 cut(s) 1195
VpaK11BI GGWCC 2 cut(s) 979, 1205
XapI RAATTY 1 cut(s) 962
XceI RCATGY 2 cut(s) 93, 1174
XhoI CTCGAG 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 311
XmnI GAANNNNTTC 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.