heat shock
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16030 |
| fragaria_vesca | FvH4_1g00710 |
| malus_domestica | MD02G1005800.v1.1 MD15G1150500.v1.1 MD17G1225700.v1.1 MD17G1226000.v1.1 MD17G1226100.v1.1 |
| prunus_persica | Prupe.3G102200_v2.0.a1 Prupe.3G102300_v2.0.a1 Prupe.7G265200_v2.0.a1 |
| pyrus_communis | pycom15g13460 pycom17g22940 |
| rosa_chinensis | RchiOBHm_Chr2g0085421 |
| rosa_laevigata | RLG00000015686 |
| rosa_multiflora | Rmu_sc0004926.1_g000018 Rmu_sc0007908.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00155390 |
| rosa_rugosa | Rorug01G0460300 Rorug01G0460400 Rorug01G0460400 |
| rosa_samantha | Rh2AG008500 Rh2CG010300 |
| rosa_wichuraiana | Rw2G000820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 7 cut(s) | 170, 432, 495, 516, 557, 950, 1409 |
| AclWI | GGATC | 5 cut(s) | 1005, 1141, 1511, 1524, 1544 |
| AcoI | YGGCCR | 1 cut(s) | 1587 |
| AcsI | RAATTY | 2 cut(s) | 1202, 1447 |
| AcuI | CTGAAG | 1 cut(s) | 1506 |
| AcyI | GRCGYC | 2 cut(s) | 27, 303 |
| AfaI | GTAC | 3 cut(s) | 69, 439, 1403 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 113, 289, 928, 1138, 1697, 1718 |
| AgeI | ACCGGT | 1 cut(s) | 971 |
| AgsI | TTSAA | 3 cut(s) | 274, 892, 1288 |
| AjnI | CCWGG | 3 cut(s) | 728, 1172, 1711 |
| AluBI | AGCT | 8 cut(s) | 85, 605, 742, 874, 1046, 1210, 1229, 1748 |
| AluI | AGCT | 8 cut(s) | 85, 605, 742, 874, 1046, 1210, 1229, 1748 |
| Alw21I | GWGCWC | 1 cut(s) | 607 |
| Alw26I | GTCTC | 2 cut(s) | 1034, 1297 |
| AlwI | GGATC | 5 cut(s) | 1005, 1141, 1511, 1524, 1544 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 877, 1570 |
| Ama87I | CYCGRG | 1 cut(s) | 1136 |
| ApeKI | GCWGC | 5 cut(s) | 356, 359, 871, 947, 959 |
| ApoI | RAATTY | 2 cut(s) | 1202, 1447 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 637, 669 |
| AsiGI | ACCGGT | 1 cut(s) | 971 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 161 |
| AspLEI | GCGC | 1 cut(s) | 947 |
| AspS9I | GGNCC | 6 cut(s) | 110, 636, 726, 1170, 1176, 1751 |
| AsuC2I | CCSGG | 5 cut(s) | 108, 114, 923, 1137, 1138 |
| AsuHPI | GGTGA | 8 cut(s) | 265, 413, 512, 530, 986, 992, 1330, 1435 |
| AsuII | TTCGAA | 1 cut(s) | 480 |
| AvaI | CYCGRG | 1 cut(s) | 1136 |
| AvaII | GGWCC | 1 cut(s) | 1176 |
| BamHI | GGATCC | 1 cut(s) | 1516 |
| BanII | GRGCYC | 1 cut(s) | 607 |
| BauI | CACGAG | 1 cut(s) | 721 |
| BbsI | GAAGAC | 2 cut(s) | 13, 645 |
| Bbv12I | GWGCWC | 1 cut(s) | 607 |
| BbvCI | CCTCAGC | 3 cut(s) | 216, 617, 1299 |
| BbvI | GCAGC | 5 cut(s) | 343, 346, 883, 934, 946 |
| BccI | CCATC | 1 cut(s) | 1375 |
| BceAI | ACGGC | 2 cut(s) | 233, 369 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1253, 1287 |
| BciT130I | CCWGG | 3 cut(s) | 730, 1174, 1713 |
| BclI | TGATCA | 1 cut(s) | 982 |
| BcnI | CCSGG | 5 cut(s) | 108, 114, 923, 1137, 1138 |
| BcoDI | GTCTC | 2 cut(s) | 1034, 1297 |
| BfaI | CTAG | 4 cut(s) | 600, 852, 1233, 1731 |
| BfmI | CTRYAG | 2 cut(s) | 363, 878 |
| BfoI | RGCGCY | 1 cut(s) | 948 |
| BglII | AGATCT | 1 cut(s) | 1107 |
| BisI | GCNGC | 5 cut(s) | 357, 360, 872, 948, 960 |
| BlpI | GCTNAGC | 1 cut(s) | 1358 |
| BlsI | GCNGC | 5 cut(s) | 358, 361, 873, 949, 961 |
| Bme1390I | CCNGG | 8 cut(s) | 108, 114, 730, 923, 1137, 1138, 1174, 1713 |
| Bme18I | GGWCC | 1 cut(s) | 1176 |
| BmeT110I | CYCGRG | 1 cut(s) | 1136 |
| BmgT120I | GGNCC | 6 cut(s) | 110, 636, 726, 1170, 1176, 1751 |
| BmiI | GGNNCC | 4 cut(s) | 112, 774, 1518, 1580 |
| BmrFI | CCNGG | 8 cut(s) | 108, 114, 730, 923, 1137, 1138, 1174, 1713 |
| BmsI | GCATC | 5 cut(s) | 321, 787, 1261, 1381, 1429 |
| BpiI | GAAGAC | 2 cut(s) | 13, 645 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 167, 199 |
| BpmI | CTGGAG | 3 cut(s) | 1335, 1592, 1764 |
| Bpu10I | CCTNAGC | 3 cut(s) | 216, 617, 1299 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1358 |
| Bpu14I | TTCGAA | 1 cut(s) | 480 |
| BpuEI | CTTGAG | 1 cut(s) | 1058 |
| BpuMI | CCSGG | 5 cut(s) | 108, 114, 923, 1137, 1138 |
| Bsa29I | ATCGAT | 2 cut(s) | 681, 702 |
| BsaBI | GATNNNNATC | 2 cut(s) | 335, 1334 |
| BsaHI | GRCGYC | 2 cut(s) | 27, 303 |
| BsaWI | WCCGGW | 1 cut(s) | 971 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 113, 289, 928, 1138, 1697, 1718 |
| Bse118I | RCCGGY | 3 cut(s) | 497, 775, 971 |
| Bse1I | ACTGG | 2 cut(s) | 1219, 1747 |
| Bse8I | GATNNNNATC | 2 cut(s) | 335, 1334 |
| BseBI | CCWGG | 3 cut(s) | 730, 1174, 1713 |
| BseCI | ATCGAT | 2 cut(s) | 681, 702 |
| BseGI | GGATG | 7 cut(s) | 802, 931, 1396, 1444, 1498, 1603, 1708 |
| BseJI | GATNNNNATC | 2 cut(s) | 335, 1334 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 113, 289, 928, 1138, 1697, 1718 |
| BseMII | CTCAG | 9 cut(s) | 207, 599, 608, 677, 782, 1039, 1259, 1290, 1349 |
| BseNI | ACTGG | 2 cut(s) | 1219, 1747 |
| BseRI | GAGGAG | 7 cut(s) | 188, 482, 625, 752, 1011, 1433, 1568 |
| BseXI | GCAGC | 5 cut(s) | 343, 346, 883, 934, 946 |
| BsgI | GTGCAG | 2 cut(s) | 1406, 1698 |
| Bsh1285I | CGRYCG | 1 cut(s) | 46 |
| BshTI | ACCGGT | 1 cut(s) | 971 |
| BshVI | ATCGAT | 2 cut(s) | 681, 702 |
| BsiEI | CGRYCG | 1 cut(s) | 46 |
| BsiHKAI | GWGCWC | 1 cut(s) | 607 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1136 |
| BsiSI | CCGG | 9 cut(s) | 108, 114, 306, 318, 498, 776, 923, 972, 1137 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 113, 289, 928, 1138, 1697, 1718 |
| BsmAI | GTCTC | 2 cut(s) | 1034, 1297 |
| BsmI | GAATGC | 2 cut(s) | 601, 1218 |
| BsoBI | CYCGRG | 1 cut(s) | 1136 |
| Bsp119I | TTCGAA | 1 cut(s) | 480 |
| Bsp1286I | GDGCHC | 1 cut(s) | 607 |
| Bsp1407I | TGTACA | 1 cut(s) | 67 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1358 |
| Bsp19I | CCATGG | 1 cut(s) | 186 |
| BspACI | CCGC | 7 cut(s) | 170, 432, 495, 516, 557, 950, 1409 |
| BspCNI | CTCAG | 9 cut(s) | 208, 600, 609, 676, 783, 1038, 1258, 1291, 1350 |
| BspDI | ATCGAT | 2 cut(s) | 681, 702 |
| BspLI | GGNNCC | 4 cut(s) | 112, 774, 1518, 1580 |
| BspMAI | CTGCAG | 1 cut(s) | 882 |
| BspPI | GGATC | 5 cut(s) | 1005, 1141, 1511, 1524, 1544 |
| BspT104I | TTCGAA | 1 cut(s) | 480 |
| BsrFI | RCCGGY | 3 cut(s) | 497, 775, 971 |
| BsrGI | TGTACA | 1 cut(s) | 67 |
| BsrI | ACTGG | 2 cut(s) | 1219, 1747 |
| BssAI | RCCGGY | 3 cut(s) | 497, 775, 971 |
| BssNI | GRCGYC | 2 cut(s) | 27, 303 |
| BssSI | CACGAG | 1 cut(s) | 721 |
| BssT1I | CCWWGG | 4 cut(s) | 186, 297, 861, 1179 |
| Bst2BI | CACGAG | 1 cut(s) | 721 |
| Bst2UI | CCWGG | 3 cut(s) | 730, 1174, 1713 |
| Bst4CI | ACNGT | 2 cut(s) | 19, 259 |
| Bst6I | CTCTTC | 2 cut(s) | 147, 1758 |
| BstACI | GRCGYC | 2 cut(s) | 27, 303 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 877 |
| BstAUI | TGTACA | 1 cut(s) | 67 |
| BstBI | TTCGAA | 1 cut(s) | 480 |
| BstC8I | GCNNGC | 2 cut(s) | 628, 1750 |
| BstDSI | CCRYGG | 2 cut(s) | 186, 249 |
| BstF5I | GGATG | 7 cut(s) | 802, 931, 1396, 1444, 1498, 1603, 1708 |
| BstH2I | RGCGCY | 1 cut(s) | 948 |
| BstHHI | GCGC | 1 cut(s) | 947 |
| BstMAI | GTCTC | 2 cut(s) | 1034, 1297 |
| BstMCI | CGRYCG | 1 cut(s) | 46 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 365, 877, 944, 956, 1676, 1745 |
| BstNI | CCWGG | 3 cut(s) | 730, 1174, 1713 |
| BstNSI | RCATGY | 1 cut(s) | 1711 |
| BstSCI | CCNGG | 8 cut(s) | 106, 112, 728, 921, 1135, 1136, 1172, 1711 |
| BstSFI | CTRYAG | 2 cut(s) | 363, 878 |
| BstV1I | GCAGC | 5 cut(s) | 343, 346, 883, 934, 946 |
| BstV2I | GAAGAC | 2 cut(s) | 13, 645 |
| BstX2I | RGATCY | 3 cut(s) | 997, 1107, 1516 |
| BstYI | RGATCY | 3 cut(s) | 997, 1107, 1516 |
| Bsu15I | ATCGAT | 2 cut(s) | 681, 702 |
| BsuTUI | ATCGAT | 2 cut(s) | 681, 702 |
| BtgI | CCRYGG | 2 cut(s) | 186, 249 |
| BtsCI | GGATG | 7 cut(s) | 802, 931, 1396, 1444, 1498, 1603, 1708 |
| BtsIMutI | CAGTG | 2 cut(s) | 595, 1571 |
| Cac8I | GCNNGC | 2 cut(s) | 628, 1750 |
| CaiI | CAGNNNCTG | 2 cut(s) | 877, 1570 |
| CfoI | GCGC | 1 cut(s) | 947 |
| Cfr10I | RCCGGY | 3 cut(s) | 497, 775, 971 |
| Cfr13I | GGNCC | 6 cut(s) | 110, 636, 726, 1170, 1176, 1751 |
| Cfr9I | CCCGGG | 1 cut(s) | 1136 |
| ClaI | ATCGAT | 2 cut(s) | 681, 702 |
| CseI | GACGC | 3 cut(s) | 23, 35, 311 |
| Csp6I | GTAC | 3 cut(s) | 68, 438, 1402 |
| CspAI | ACCGGT | 1 cut(s) | 971 |
| CviAII | CATG | 5 cut(s) | 79, 127, 187, 748, 1708 |
| CviQI | GTAC | 3 cut(s) | 68, 438, 1402 |
| EaeI | YGGCCR | 1 cut(s) | 1587 |
| Eam1104I | CTCTTC | 2 cut(s) | 147, 1758 |
| EarI | CTCTTC | 2 cut(s) | 147, 1758 |
| EciI | GGCGGA | 3 cut(s) | 185, 572, 1424 |
| Ecl136II | GAGCTC | 1 cut(s) | 605 |
| Eco130I | CCWWGG | 4 cut(s) | 186, 297, 861, 1179 |
| Eco147I | AGGCCT | 2 cut(s) | 221, 389 |
| Eco24I | GRGCYC | 1 cut(s) | 607 |
| Eco32I | GATATC | 1 cut(s) | 586 |
| Eco47I | GGWCC | 1 cut(s) | 1176 |
| Eco53kI | GAGCTC | 1 cut(s) | 605 |
| Eco57I | CTGAAG | 1 cut(s) | 1506 |
| Eco88I | CYCGRG | 1 cut(s) | 1136 |
| EcoICRI | GAGCTC | 1 cut(s) | 605 |
| EcoRI | GAATTC | 1 cut(s) | 1447 |
| EcoRII | CCWGG | 3 cut(s) | 728, 1172, 1711 |
| EcoRV | GATATC | 1 cut(s) | 586 |
| EcoT14I | CCWWGG | 4 cut(s) | 186, 297, 861, 1179 |
| EcoT38I | GRGCYC | 1 cut(s) | 607 |
| ErhI | CCWWGG | 4 cut(s) | 186, 297, 861, 1179 |
| FaeI | CATG | 5 cut(s) | 82, 130, 190, 751, 1711 |
| FatI | CATG | 5 cut(s) | 78, 126, 186, 747, 1707 |
| FauNDI | CATATG | 1 cut(s) | 370 |
| FbaI | TGATCA | 1 cut(s) | 982 |
| Fnu4HI | GCNGC | 5 cut(s) | 357, 360, 872, 948, 960 |
| FokI | GGATG | 7 cut(s) | 809, 938, 1403, 1451, 1505, 1610, 1715 |
| FriOI | GRGCYC | 1 cut(s) | 607 |
| Fsp4HI | GCNGC | 5 cut(s) | 357, 360, 872, 948, 960 |
| FspBI | CTAG | 4 cut(s) | 600, 852, 1233, 1731 |
| GlaI | GCGC | 1 cut(s) | 946 |
| GluI | GCNGC | 5 cut(s) | 357, 360, 872, 948, 960 |
| GsuI | CTGGAG | 3 cut(s) | 1335, 1592, 1764 |
| HaeII | RGCGCY | 1 cut(s) | 948 |
| HapII | CCGG | 9 cut(s) | 108, 114, 306, 318, 498, 776, 923, 972, 1137 |
| HgaI | GACGC | 3 cut(s) | 23, 35, 311 |
| HhaI | GCGC | 1 cut(s) | 947 |
| Hin1I | GRCGYC | 2 cut(s) | 27, 303 |
| Hin1II | CATG | 5 cut(s) | 82, 130, 190, 751, 1711 |
| Hin6I | GCGC | 1 cut(s) | 945 |
| HinP1I | GCGC | 1 cut(s) | 945 |
| HinfI | GANTC | 9 cut(s) | 51, 278, 336, 646, 683, 699, 820, 856, 1069 |
| HpaII | CCGG | 9 cut(s) | 108, 114, 306, 318, 498, 776, 923, 972, 1137 |
| HphI | GGTGA | 8 cut(s) | 265, 413, 512, 530, 986, 992, 1330, 1435 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy188III | TCNNGA | 9 cut(s) | 241, 377, 721, 760, 824, 995, 1285, 1333, 1540 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| Hpy99I | CGWCG | 5 cut(s) | 29, 137, 355, 718, 830 |
| HpyCH4III | ACNGT | 2 cut(s) | 19, 259 |
| HpyCH4IV | ACGT | 1 cut(s) | 828 |
| HpyCH4V | TGCA | 8 cut(s) | 880, 909, 1387, 1394, 1505, 1638, 1679, 1739 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 365, 877, 944, 956, 1676, 1745 |
| HpySE526I | ACGT | 1 cut(s) | 828 |
| Hsp92I | GRCGYC | 2 cut(s) | 27, 303 |
| Hsp92II | CATG | 5 cut(s) | 82, 130, 190, 751, 1711 |
| HspAI | GCGC | 1 cut(s) | 945 |
| Ksp22I | TGATCA | 1 cut(s) | 982 |
| LmnI | GCTCC | 5 cut(s) | 739, 772, 1102, 1234, 1745 |
| Lsp1109I | GCAGC | 5 cut(s) | 343, 346, 883, 934, 946 |
| LweI | GCATC | 5 cut(s) | 321, 787, 1261, 1381, 1429 |
| MaeI | CTAG | 4 cut(s) | 600, 852, 1233, 1731 |
| MaeII | ACGT | 1 cut(s) | 828 |
| MaeIII | GTNAC | 4 cut(s) | 253, 450, 500, 1015 |
| MfeI | CAATTG | 2 cut(s) | 672, 1583 |
| MflI | RGATCY | 3 cut(s) | 997, 1107, 1516 |
| MhlI | GDGCHC | 1 cut(s) | 607 |
| MluCI | AATT | 6 cut(s) | 672, 1202, 1447, 1459, 1511, 1583 |
| MlyI | GAGTC | 2 cut(s) | 272, 640 |
| MmeI | TCCRAC | 5 cut(s) | 26, 81, 1115, 1584, 1605 |
| MroXI | GAANNNNTTC | 1 cut(s) | 161 |
| MseI | TTAA | 4 cut(s) | 96, 342, 918, 1774 |
| MspA1I | CMGCKG | 1 cut(s) | 1046 |
| MspI | CCGG | 9 cut(s) | 108, 114, 306, 318, 498, 776, 923, 972, 1137 |
| MspR9I | CCNGG | 8 cut(s) | 108, 114, 730, 923, 1137, 1138, 1174, 1713 |
| MunI | CAATTG | 2 cut(s) | 672, 1583 |
| Mva1269I | GAATGC | 2 cut(s) | 601, 1218 |
| MvaI | CCWGG | 3 cut(s) | 730, 1174, 1713 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 365, 877, 944, 956, 1676, 1745 |
| NciI | CCSGG | 5 cut(s) | 108, 114, 923, 1137, 1138 |
| NcoI | CCATGG | 1 cut(s) | 186 |
| NdeI | CATATG | 1 cut(s) | 370 |
| NlaIII | CATG | 5 cut(s) | 82, 130, 190, 751, 1711 |
| NlaIV | GGNNCC | 4 cut(s) | 112, 774, 1518, 1580 |
| NmeAIII | GCCGAG | 4 cut(s) | 146, 408, 1274, 1615 |
| NmuCI | GTSAC | 4 cut(s) | 253, 450, 500, 1015 |
| NspI | RCATGY | 1 cut(s) | 1711 |
| NspV | TTCGAA | 1 cut(s) | 480 |
| PceI | AGGCCT | 2 cut(s) | 221, 389 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 699, 719 |
| PctI | GAATGC | 2 cut(s) | 601, 1218 |
| PdmI | GAANNNNTTC | 1 cut(s) | 161 |
| PfeI | GAWTC | 7 cut(s) | 51, 336, 683, 699, 820, 856, 1069 |
| PflFI | GACNNNGTC | 1 cut(s) | 649 |
| PinAI | ACCGGT | 1 cut(s) | 971 |
| PkrI | GCNGC | 5 cut(s) | 358, 361, 873, 949, 961 |
| PleI | GAGTC | 2 cut(s) | 272, 640 |
| PpsI | GAGTC | 2 cut(s) | 272, 640 |
| Psp124BI | GAGCTC | 1 cut(s) | 607 |
| Psp6I | CCWGG | 3 cut(s) | 728, 1172, 1711 |
| PspGI | CCWGG | 3 cut(s) | 728, 1172, 1711 |
| PspN4I | GGNNCC | 4 cut(s) | 112, 774, 1518, 1580 |
| PspPI | GGNCC | 6 cut(s) | 110, 636, 726, 1170, 1176, 1751 |
| PstI | CTGCAG | 1 cut(s) | 882 |
| PstNI | CAGNNNCTG | 2 cut(s) | 877, 1570 |
| PsuI | RGATCY | 3 cut(s) | 997, 1107, 1516 |
| PsyI | GACNNNGTC | 1 cut(s) | 649 |
| PvuII | CAGCTG | 1 cut(s) | 1046 |
| RsaI | GTAC | 3 cut(s) | 69, 439, 1403 |
| RsaNI | GTAC | 3 cut(s) | 68, 438, 1402 |
| SacI | GAGCTC | 1 cut(s) | 607 |
| SaqAI | TTAA | 4 cut(s) | 96, 342, 918, 1774 |
| SatI | GCNGC | 5 cut(s) | 357, 360, 872, 948, 960 |
| Sau96I | GGNCC | 6 cut(s) | 110, 636, 726, 1170, 1176, 1751 |
| SchI | GAGTC | 2 cut(s) | 272, 640 |
| ScrFI | CCNGG | 8 cut(s) | 108, 114, 730, 923, 1137, 1138, 1174, 1713 |
| SduI | GDGCHC | 1 cut(s) | 607 |
| SfaNI | GCATC | 5 cut(s) | 321, 787, 1261, 1381, 1429 |
| SfcI | CTRYAG | 2 cut(s) | 363, 878 |
| SfuI | TTCGAA | 1 cut(s) | 480 |
| SgrAI | CRCCGGYG | 1 cut(s) | 497 |
| SinI | GGWCC | 1 cut(s) | 1176 |
| SmaI | CCCGGG | 1 cut(s) | 1138 |
| SmlI | CTYRAG | 1 cut(s) | 1037 |
| SmoI | CTYRAG | 1 cut(s) | 1037 |
| Sse9I | AATT | 6 cut(s) | 672, 1202, 1447, 1459, 1511, 1583 |
| SseBI | AGGCCT | 2 cut(s) | 221, 389 |
| SsiI | CCGC | 7 cut(s) | 170, 432, 495, 516, 557, 950, 1409 |
| SspMI | CTAG | 4 cut(s) | 600, 852, 1233, 1731 |
| SstI | GAGCTC | 1 cut(s) | 607 |
| StuI | AGGCCT | 2 cut(s) | 221, 389 |
| StyD4I | CCNGG | 8 cut(s) | 106, 112, 728, 921, 1135, 1136, 1172, 1711 |
| StyI | CCWWGG | 4 cut(s) | 186, 297, 861, 1179 |
| TaaI | ACNGT | 2 cut(s) | 19, 259 |
| TaiI | ACGT | 1 cut(s) | 831 |
| TaqII | GACCGA | 1 cut(s) | 32 |
| TasI | AATT | 6 cut(s) | 672, 1202, 1447, 1459, 1511, 1583 |
| TatI | WGTACW | 1 cut(s) | 67 |
| TfiI | GAWTC | 7 cut(s) | 51, 336, 683, 699, 820, 856, 1069 |
| Tru1I | TTAA | 4 cut(s) | 96, 342, 918, 1774 |
| Tru9I | TTAA | 4 cut(s) | 96, 342, 918, 1774 |
| TscAI | CASTG | 2 cut(s) | 595, 1571 |
| TseFI | GTSAC | 4 cut(s) | 253, 450, 500, 1015 |
| TseI | GCWGC | 5 cut(s) | 356, 359, 871, 947, 959 |
| Tsp45I | GTSAC | 4 cut(s) | 253, 450, 500, 1015 |
| TspDTI | ATGAA | 4 cut(s) | 17, 95, 218, 1173 |
| TspGWI | ACGGA | 1 cut(s) | 409 |
| TspMI | CCCGGG | 1 cut(s) | 1136 |
| TspRI | CASTG | 2 cut(s) | 595, 1571 |
| Tth111I | GACNNNGTC | 1 cut(s) | 649 |
| VpaK11BI | GGWCC | 1 cut(s) | 1176 |
| XapI | RAATTY | 2 cut(s) | 1202, 1447 |
| XceI | RCATGY | 1 cut(s) | 1711 |
| XmaI | CCCGGG | 1 cut(s) | 1136 |
| XmnI | GAANNNNTTC | 1 cut(s) | 161 |
| XspI | CTAG | 4 cut(s) | 600, 852, 1233, 1731 |