WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G33530 AT3G33530 AT3G33530 AT3G33530 AT3G33530 |
| fragaria_vesca | FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 FvH4_1g02820 |
| malus_domestica | MD02G1028100.v1.1 MD15G1169800.v1.1 |
| prunus_persica | Prupe.7G246700_v2.0.a1 |
| pyrus_communis | pycom02g02310 pycom15g15140 |
| rosa_chinensis | RchiOBHm_Chr2g0087941 |
| rosa_laevigata | RLG00000015913 |
| rosa_multiflora | Rmu_sc0013931.1_g000009 Rmu_sc0014136.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00153110 |
| rosa_rugosa | Rorug01G0479800 Rorug01G0479900 |
| rosa_samantha | Rh2AG034600 Rh2BG033600 Rh2CG034600 Rh2DG034300 |
| rosa_wichuraiana | Rw2G002700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 320, 1000 |
| Acc36I | ACCTGC | 3 cut(s) | 320, 1000, 2020 |
| Acc65I | GGTACC | 2 cut(s) | 1884, 2917 |
| AccB1I | GGYRCC | 2 cut(s) | 1884, 2917 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1340, 2903 |
| AccBSI | CCGCTC | 1 cut(s) | 268 |
| AccI | GTMKAC | 1 cut(s) | 29 |
| AccII | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| AccIII | TCCGGA | 1 cut(s) | 482 |
| AclWI | GGATC | 9 cut(s) | 84, 97, 572, 929, 942, 2143, 2212, 2225, 2585 |
| AcoI | YGGCCR | 2 cut(s) | 520, 729 |
| AcsI | RAATTY | 4 cut(s) | 1441, 1714, 2405, 2841 |
| AcuI | CTGAAG | 7 cut(s) | 392, 731, 1299, 1481, 1494, 2212, 3138 |
| AcyI | GRCGYC | 2 cut(s) | 543, 875 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 439, 631, 1052, 1168, 1340, 1881, 2437, 2551, 2903 |
| AflII | CTTAAG | 2 cut(s) | 1472, 1861 |
| AgeI | ACCGGT | 1 cut(s) | 2292 |
| AgsI | TTSAA | 5 cut(s) | 1029, 1050, 1289, 1440, 1548 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1938 |
| AjnI | CCWGG | 6 cut(s) | 339, 426, 1339, 2422, 2536, 2845 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 193, 225, 2227, 2259 |
| Alw21I | GWGCWC | 5 cut(s) | 1017, 1849, 2129, 2188, 3100 |
| Alw26I | GTCTC | 5 cut(s) | 644, 745, 866, 2421, 3138 |
| Alw44I | GTGCAC | 2 cut(s) | 1013, 1845 |
| AlwI | GGATC | 9 cut(s) | 84, 97, 572, 929, 942, 2143, 2212, 2225, 2585 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1340 |
| Aor13HI | TCCGGA | 1 cut(s) | 482 |
| ApaLI | GTGCAC | 2 cut(s) | 1013, 1845 |
| ApeKI | GCWGC | 9 cut(s) | 58, 135, 169, 906, 928, 1661, 2964, 3041, 3044 |
| ApoI | RAATTY | 4 cut(s) | 1441, 1714, 2405, 2841 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3200, 3232 |
| AseI | ATTAAT | 2 cut(s) | 2646, 3269 |
| AsiGI | ACCGGT | 1 cut(s) | 2292 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3315 |
| Asp718I | GGTACC | 2 cut(s) | 1884, 2917 |
| AspLEI | GCGC | 4 cut(s) | 550, 594, 962, 2445 |
| AspS9I | GGNCC | 7 cut(s) | 65, 261, 343, 430, 448, 1561, 1989 |
| AsuC2I | CCSGG | 4 cut(s) | 63, 733, 745, 1823 |
| AsuII | TTCGAA | 1 cut(s) | 2875 |
| AvaII | GGWCC | 3 cut(s) | 261, 430, 1989 |
| BaeGI | GKGCMC | 2 cut(s) | 1017, 1849 |
| BamHI | GGATCC | 3 cut(s) | 89, 934, 2217 |
| BanI | GGYRCC | 2 cut(s) | 1884, 2917 |
| BanII | GRGCYC | 3 cut(s) | 11, 303, 2129 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1291, 1323, 2952, 2984 |
| BauI | CACGAG | 1 cut(s) | 3093 |
| Bbv12I | GWGCWC | 5 cut(s) | 1017, 1849, 2129, 2188, 3100 |
| BbvCI | CCTCAGC | 1 cut(s) | 101 |
| BbvI | GCAGC | 9 cut(s) | 45, 147, 181, 893, 915, 1648, 2951, 3028, 3031 |
| BceAI | ACGGC | 3 cut(s) | 558, 770, 1548 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 67, 101, 901, 935 |
| BciT130I | CCWGG | 6 cut(s) | 341, 428, 1341, 2424, 2538, 2847 |
| BciVI | GTATCC | 1 cut(s) | 2402 |
| BcnI | CCSGG | 4 cut(s) | 63, 733, 745, 1823 |
| BcoDI | GTCTC | 5 cut(s) | 644, 745, 866, 2421, 3138 |
| BfaI | CTAG | 4 cut(s) | 1719, 2174, 2189, 3306 |
| BfmI | CTRYAG | 1 cut(s) | 30 |
| BfrI | CTTAAG | 2 cut(s) | 1472, 1861 |
| BfuAI | ACCTGC | 3 cut(s) | 320, 1000, 2020 |
| BfuI | GTATCC | 1 cut(s) | 2402 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 811 |
| BglII | AGATCT | 1 cut(s) | 2687 |
| BmcAI | AGTACT | 1 cut(s) | 985 |
| Bme18I | GGWCC | 3 cut(s) | 261, 430, 1989 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1938 |
| BmgT120I | GGNCC | 7 cut(s) | 65, 261, 343, 430, 448, 1561, 1989 |
| BpmI | CTGGAG | 8 cut(s) | 289, 737, 1100, 1395, 1782, 2445, 2481, 2634 |
| Bpu10I | CCTNAGC | 1 cut(s) | 101 |
| Bpu14I | TTCGAA | 1 cut(s) | 2875 |
| BpuEI | CTTGAG | 2 cut(s) | 2124, 2660 |
| BpuMI | CCSGG | 4 cut(s) | 63, 733, 745, 1823 |
| Bsa29I | ATCGAT | 2 cut(s) | 2065, 2889 |
| BsaHI | GRCGYC | 2 cut(s) | 543, 875 |
| BsaI | GGTCTC | 1 cut(s) | 2421 |
| BsaJI | CCNNGG | 9 cut(s) | 62, 340, 732, 762, 839, 1564, 2283, 2754, 3320 |
| BsaWI | WCCGGW | 2 cut(s) | 482, 2292 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 386, 416, 497, 527, 996, 1026, 2080, 2110 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 439, 631, 1052, 1168, 1340, 1881, 2437, 2551, 2903 |
| Bse118I | RCCGGY | 3 cut(s) | 518, 1394, 2292 |
| Bse1I | ACTGG | 7 cut(s) | 1268, 1334, 1378, 1728, 1913, 2359, 2976 |
| Bse3DI | GCAATG | 4 cut(s) | 893, 1935, 3006, 3252 |
| BseAI | TCCGGA | 1 cut(s) | 482 |
| BseBI | CCWGG | 6 cut(s) | 341, 428, 1341, 2424, 2538, 2847 |
| BseCI | ATCGAT | 2 cut(s) | 2065, 2889 |
| BseDI | CCNNGG | 9 cut(s) | 62, 340, 732, 762, 839, 1564, 2283, 2754, 3320 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 439, 631, 1052, 1168, 1340, 1881, 2437, 2551, 2903 |
| BseMI | GCAATG | 4 cut(s) | 893, 1935, 3006, 3252 |
| BseMII | CTCAG | 5 cut(s) | 115, 994, 2142, 3078, 3277 |
| BseNI | ACTGG | 7 cut(s) | 1268, 1334, 1378, 1728, 1913, 2359, 2976 |
| BseRI | GAGGAG | 6 cut(s) | 107, 278, 308, 311, 394, 481 |
| BseSI | GKGCMC | 2 cut(s) | 1017, 1849 |
| BseX3I | CGGCCG | 1 cut(s) | 520 |
| BseXI | GCAGC | 9 cut(s) | 45, 147, 181, 893, 915, 1648, 2951, 3028, 3031 |
| BseYI | CCCAGC | 3 cut(s) | 45, 71, 1996 |
| Bsh1236I | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| Bsh1285I | CGRYCG | 1 cut(s) | 523 |
| BshNI | GGYRCC | 2 cut(s) | 1884, 2917 |
| BshTI | ACCGGT | 1 cut(s) | 2292 |
| BshVI | ATCGAT | 2 cut(s) | 2065, 2889 |
| BsiEI | CGRYCG | 1 cut(s) | 523 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1017, 1849, 2129, 2188, 3100 |
| BslFI | GGGAC | 8 cut(s) | 62, 361, 737, 1049, 1636, 1988, 2101, 2330 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 439, 631, 1052, 1168, 1340, 1881, 2437, 2551, 2903 |
| BsmAI | GTCTC | 5 cut(s) | 644, 745, 866, 2421, 3138 |
| BsmBI | CGTCTC | 2 cut(s) | 644, 866 |
| BsmFI | GGGAC | 8 cut(s) | 62, 361, 737, 1049, 1636, 1988, 2101, 2330 |
| BsmI | GAATGC | 1 cut(s) | 122 |
| Bso31I | GGTCTC | 1 cut(s) | 2421 |
| Bsp119I | TTCGAA | 1 cut(s) | 2875 |
| Bsp1286I | GDGCHC | 7 cut(s) | 11, 303, 1017, 1849, 2129, 2188, 3100 |
| Bsp13I | TCCGGA | 1 cut(s) | 482 |
| Bsp1407I | TGTACA | 1 cut(s) | 3364 |
| Bsp19I | CCATGG | 1 cut(s) | 2283 |
| BspCNI | CTCAG | 5 cut(s) | 114, 993, 2141, 3077, 3276 |
| BspDI | ATCGAT | 2 cut(s) | 2065, 2889 |
| BspEI | TCCGGA | 1 cut(s) | 482 |
| BspFNI | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| BspMI | ACCTGC | 3 cut(s) | 320, 1000, 2020 |
| BspPI | GGATC | 9 cut(s) | 84, 97, 572, 929, 942, 2143, 2212, 2225, 2585 |
| BspQI | GCTCTTC | 2 cut(s) | 1029, 1971 |
| BspT104I | TTCGAA | 1 cut(s) | 2875 |
| BspT107I | GGYRCC | 2 cut(s) | 1884, 2917 |
| BspTI | CTTAAG | 2 cut(s) | 1472, 1861 |
| BspTNI | GGTCTC | 1 cut(s) | 2421 |
| BsrBI | CCGCTC | 1 cut(s) | 268 |
| BsrDI | GCAATG | 4 cut(s) | 893, 1935, 3006, 3252 |
| BsrFI | RCCGGY | 3 cut(s) | 518, 1394, 2292 |
| BsrGI | TGTACA | 1 cut(s) | 3364 |
| BsrI | ACTGG | 7 cut(s) | 1268, 1334, 1378, 1728, 1913, 2359, 2976 |
| BssAI | RCCGGY | 3 cut(s) | 518, 1394, 2292 |
| BssECI | CCNNGG | 9 cut(s) | 62, 340, 732, 762, 839, 1564, 2283, 2754, 3320 |
| BssNI | GRCGYC | 2 cut(s) | 543, 875 |
| BssSI | CACGAG | 1 cut(s) | 3093 |
| BssT1I | CCWWGG | 3 cut(s) | 2283, 2754, 3320 |
| Bst2BI | CACGAG | 1 cut(s) | 3093 |
| Bst2UI | CCWGG | 6 cut(s) | 341, 428, 1341, 2424, 2538, 2847 |
| Bst4CI | ACNGT | 8 cut(s) | 34, 640, 1421, 1450, 1627, 1690, 1742, 1978 |
| Bst6I | CTCTTC | 5 cut(s) | 1029, 1212, 1549, 1876, 1971 |
| BstACI | GRCGYC | 2 cut(s) | 543, 875 |
| BstAFI | CTTAAG | 2 cut(s) | 1472, 1861 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2183, 3164 |
| BstAUI | TGTACA | 1 cut(s) | 3364 |
| BstBI | TTCGAA | 1 cut(s) | 2875 |
| BstC8I | GCNNGC | 4 cut(s) | 56, 1083, 1130, 1527 |
| BstDEI | CTNAG | 9 cut(s) | 101, 980, 1483, 1952, 2128, 2856, 2941, 3064, 3263 |
| BstDSI | CCRYGG | 3 cut(s) | 839, 1564, 2283 |
| BstEII | GGTNACC | 3 cut(s) | 332, 634, 2906 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1879 |
| BstFNI | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| BstHHI | GCGC | 4 cut(s) | 550, 594, 962, 2445 |
| BstMAI | GTCTC | 5 cut(s) | 644, 745, 866, 2421, 3138 |
| BstMCI | CGRYCG | 1 cut(s) | 523 |
| BstNI | CCWGG | 6 cut(s) | 341, 428, 1341, 2424, 2538, 2847 |
| BstNSI | RCATGY | 2 cut(s) | 58, 2753 |
| BstPI | GGTNACC | 3 cut(s) | 332, 634, 2906 |
| BstSFI | CTRYAG | 1 cut(s) | 30 |
| BstSLI | GKGCMC | 2 cut(s) | 1017, 1849 |
| BstUI | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| BstV1I | GCAGC | 9 cut(s) | 45, 147, 181, 893, 915, 1648, 2951, 3028, 3031 |
| BstX2I | RGATCY | 5 cut(s) | 89, 934, 2135, 2217, 2687 |
| BstYI | RGATCY | 5 cut(s) | 89, 934, 2135, 2217, 2687 |
| BstZI | CGGCCG | 1 cut(s) | 520 |
| Bsu15I | ATCGAT | 2 cut(s) | 2065, 2889 |
| BsuI | GTATCC | 1 cut(s) | 2402 |
| BsuTUI | ATCGAT | 2 cut(s) | 2065, 2889 |
| BtgI | CCRYGG | 3 cut(s) | 839, 1564, 2283 |
| BtgZI | GCGATG | 1 cut(s) | 334 |
| BtsI | GCAGTG | 2 cut(s) | 815, 1521 |
| BtsIMutI | CAGTG | 2 cut(s) | 815, 1521 |
| BveI | ACCTGC | 3 cut(s) | 320, 1000, 2020 |
| Cac8I | GCNNGC | 4 cut(s) | 56, 1083, 1130, 1527 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1340 |
| CfoI | GCGC | 4 cut(s) | 550, 594, 962, 2445 |
| Cfr10I | RCCGGY | 3 cut(s) | 518, 1394, 2292 |
| Cfr13I | GGNCC | 7 cut(s) | 65, 261, 343, 430, 448, 1561, 1989 |
| Cfr42I | CCGCGG | 1 cut(s) | 842 |
| ClaI | ATCGAT | 2 cut(s) | 2065, 2889 |
| CseI | GACGC | 3 cut(s) | 551, 592, 883 |
| CspAI | ACCGGT | 1 cut(s) | 2292 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2583, 2618, 2736, 2771 |
| CviAII | CATG | 9 cut(s) | 38, 55, 1387, 2207, 2284, 2303, 2750, 3326, 3368 |
| DdeI | CTNAG | 9 cut(s) | 101, 980, 1483, 1952, 2128, 2856, 2941, 3064, 3263 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1938 |
| EaeI | YGGCCR | 2 cut(s) | 520, 729 |
| EagI | CGGCCG | 1 cut(s) | 520 |
| Eam1104I | CTCTTC | 5 cut(s) | 1029, 1212, 1549, 1876, 1971 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1938 |
| EarI | CTCTTC | 5 cut(s) | 1029, 1212, 1549, 1876, 1971 |
| EciI | GGCGGA | 5 cut(s) | 82, 100, 266, 560, 877 |
| Ecl136II | GAGCTC | 1 cut(s) | 2127 |
| EclXI | CGGCCG | 1 cut(s) | 520 |
| Eco130I | CCWWGG | 3 cut(s) | 2283, 2754, 3320 |
| Eco147I | AGGCCT | 1 cut(s) | 2833 |
| Eco24I | GRGCYC | 3 cut(s) | 11, 303, 2129 |
| Eco31I | GGTCTC | 1 cut(s) | 2421 |
| Eco47I | GGWCC | 3 cut(s) | 261, 430, 1989 |
| Eco52I | CGGCCG | 1 cut(s) | 520 |
| Eco53kI | GAGCTC | 1 cut(s) | 2127 |
| Eco57I | CTGAAG | 7 cut(s) | 392, 731, 1299, 1481, 1494, 2212, 3138 |
| Eco91I | GGTNACC | 3 cut(s) | 332, 634, 2906 |
| EcoICRI | GAGCTC | 1 cut(s) | 2127 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1879 |
| EcoO109I | RGGNCCY | 1 cut(s) | 430 |
| EcoO65I | GGTNACC | 3 cut(s) | 332, 634, 2906 |
| EcoRII | CCWGG | 6 cut(s) | 339, 426, 1339, 2422, 2536, 2845 |
| EcoT14I | CCWWGG | 3 cut(s) | 2283, 2754, 3320 |
| EcoT22I | ATGCAT | 1 cut(s) | 3184 |
| EcoT38I | GRGCYC | 3 cut(s) | 11, 303, 2129 |
| ErhI | CCWWGG | 3 cut(s) | 2283, 2754, 3320 |
| Esp3I | CGTCTC | 2 cut(s) | 644, 866 |
| FaeI | CATG | 9 cut(s) | 41, 58, 1390, 2210, 2287, 2306, 2753, 3329, 3371 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1420, 1452, 1466, 1498, 1855, 1887 |
| FaqI | GGGAC | 8 cut(s) | 62, 361, 737, 1049, 1636, 1988, 2101, 2330 |
| FatI | CATG | 9 cut(s) | 37, 54, 1386, 2206, 2283, 2302, 2749, 3325, 3367 |
| FauI | CCCGC | 4 cut(s) | 273, 834, 846, 2035 |
| FblI | GTMKAC | 1 cut(s) | 29 |
| FriOI | GRGCYC | 3 cut(s) | 11, 303, 2129 |
| FspBI | CTAG | 4 cut(s) | 1719, 2174, 2189, 3306 |
| GlaI | GCGC | 4 cut(s) | 549, 593, 961, 2444 |
| GsaI | CCCAGC | 3 cut(s) | 49, 75, 2000 |
| GsuI | CTGGAG | 8 cut(s) | 289, 737, 1100, 1395, 1782, 2445, 2481, 2634 |
| HgaI | GACGC | 3 cut(s) | 551, 592, 883 |
| HhaI | GCGC | 4 cut(s) | 550, 594, 962, 2445 |
| Hin1I | GRCGYC | 2 cut(s) | 543, 875 |
| Hin1II | CATG | 9 cut(s) | 41, 58, 1390, 2210, 2287, 2306, 2753, 3329, 3371 |
| Hin6I | GCGC | 4 cut(s) | 548, 592, 960, 2443 |
| HinP1I | GCGC | 4 cut(s) | 548, 592, 960, 2443 |
| HincII | GTYRAC | 3 cut(s) | 1272, 1630, 3010 |
| HindII | GTYRAC | 3 cut(s) | 1272, 1630, 3010 |
| HindIII | AAGCTT | 3 cut(s) | 15, 1130, 2158 |
| Hpy166II | GTNNAC | 9 cut(s) | 30, 1015, 1272, 1630, 1847, 2656, 3010, 3311, 3365 |
| Hpy8I | GTNNAC | 9 cut(s) | 30, 1015, 1272, 1630, 1847, 2656, 3010, 3311, 3365 |
| Hpy99I | CGWCG | 8 cut(s) | 25, 158, 545, 608, 611, 757, 760, 974 |
| HpyCH4III | ACNGT | 8 cut(s) | 34, 640, 1421, 1450, 1627, 1690, 1742, 1978 |
| HpyCH4IV | ACGT | 5 cut(s) | 156, 833, 1632, 1843, 3313 |
| HpyF3I | CTNAG | 9 cut(s) | 101, 980, 1483, 1952, 2128, 2856, 2941, 3064, 3263 |
| HpySE526I | ACGT | 5 cut(s) | 156, 833, 1632, 1843, 3313 |
| Hsp92I | GRCGYC | 2 cut(s) | 543, 875 |
| Hsp92II | CATG | 9 cut(s) | 41, 58, 1390, 2210, 2287, 2306, 2753, 3329, 3371 |
| HspAI | GCGC | 4 cut(s) | 548, 592, 960, 2443 |
| Kpn2I | TCCGGA | 1 cut(s) | 482 |
| KpnI | GGTACC | 2 cut(s) | 1888, 2921 |
| KspI | CCGCGG | 1 cut(s) | 842 |
| LguI | GCTCTTC | 2 cut(s) | 1029, 1971 |
| LmnI | GCTCC | 7 cut(s) | 143, 273, 314, 518, 844, 1506, 2615 |
| Lsp1109I | GCAGC | 9 cut(s) | 45, 147, 181, 893, 915, 1648, 2951, 3028, 3031 |
| MaeI | CTAG | 4 cut(s) | 1719, 2174, 2189, 3306 |
| MaeII | ACGT | 5 cut(s) | 156, 833, 1632, 1843, 3313 |
| MbiI | CCGCTC | 1 cut(s) | 268 |
| MfeI | CAATTG | 2 cut(s) | 1050, 2777 |
| MflI | RGATCY | 5 cut(s) | 89, 934, 2135, 2217, 2687 |
| MhlI | GDGCHC | 7 cut(s) | 11, 303, 1017, 1849, 2129, 2188, 3100 |
| MlyI | GAGTC | 6 cut(s) | 395, 452, 606, 689, 747, 1948 |
| MmeI | TCCRAC | 7 cut(s) | 224, 589, 1468, 2123, 2532, 2765, 3315 |
| Mph1103I | ATGCAT | 1 cut(s) | 3184 |
| MroI | TCCGGA | 1 cut(s) | 482 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MspA1I | CMGCKG | 2 cut(s) | 258, 841 |
| MspCI | CTTAAG | 2 cut(s) | 1472, 1861 |
| MunI | CAATTG | 2 cut(s) | 1050, 2777 |
| Mva1269I | GAATGC | 1 cut(s) | 122 |
| MvaI | CCWGG | 6 cut(s) | 341, 428, 1341, 2424, 2538, 2847 |
| MvnI | CGCG | 8 cut(s) | 282, 437, 548, 592, 797, 841, 903, 2445 |
| NciI | CCSGG | 4 cut(s) | 63, 733, 745, 1823 |
| NcoI | CCATGG | 1 cut(s) | 2283 |
| NlaIII | CATG | 9 cut(s) | 41, 58, 1390, 2210, 2287, 2306, 2753, 3329, 3371 |
| NmeAIII | GCCGAG | 1 cut(s) | 743 |
| NmuCI | GTSAC | 8 cut(s) | 178, 244, 332, 634, 829, 1516, 2222, 2906 |
| NsiI | ATGCAT | 1 cut(s) | 3184 |
| NspI | RCATGY | 2 cut(s) | 58, 2753 |
| NspV | TTCGAA | 1 cut(s) | 2875 |
| PaeI | GCATGC | 1 cut(s) | 58 |
| PaqCI | CACCTGC | 2 cut(s) | 320, 1000 |
| PceI | AGGCCT | 1 cut(s) | 2833 |
| PciSI | GCTCTTC | 2 cut(s) | 1029, 1971 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 93, 549, 2262 |
| PctI | GAATGC | 1 cut(s) | 122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3315 |
| PflFI | GACNNNGTC | 1 cut(s) | 25 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1340, 2903 |
| PfoI | TCCNGGA | 4 cut(s) | 426, 743, 2536, 2845 |
| PinAI | ACCGGT | 1 cut(s) | 2292 |
| PleI | GAGTC | 6 cut(s) | 395, 452, 606, 689, 746, 1947 |
| PpsI | GAGTC | 6 cut(s) | 395, 452, 606, 689, 746, 1947 |
| PpuMI | RGGWCCY | 1 cut(s) | 430 |
| PshBI | ATTAAT | 2 cut(s) | 2646, 3269 |
| Psp124BI | GAGCTC | 1 cut(s) | 2129 |
| Psp5II | RGGWCCY | 1 cut(s) | 430 |
| Psp6I | CCWGG | 6 cut(s) | 339, 426, 1339, 2422, 2536, 2845 |
| PspEI | GGTNACC | 3 cut(s) | 332, 634, 2906 |
| PspFI | CCCAGC | 3 cut(s) | 45, 71, 1996 |
| PspGI | CCWGG | 6 cut(s) | 339, 426, 1339, 2422, 2536, 2845 |
| PspPI | GGNCC | 7 cut(s) | 65, 261, 343, 430, 448, 1561, 1989 |
| PspPPI | RGGWCCY | 1 cut(s) | 430 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1340 |
| PsuI | RGATCY | 5 cut(s) | 89, 934, 2135, 2217, 2687 |
| PsyI | GACNNNGTC | 1 cut(s) | 25 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SacI | GAGCTC | 1 cut(s) | 2129 |
| SacII | CCGCGG | 1 cut(s) | 842 |
| SapI | GCTCTTC | 2 cut(s) | 1029, 1971 |
| Sau96I | GGNCC | 7 cut(s) | 65, 261, 343, 430, 448, 1561, 1989 |
| ScaI | AGTACT | 1 cut(s) | 985 |
| SchI | GAGTC | 6 cut(s) | 395, 452, 606, 689, 747, 1948 |
| SduI | GDGCHC | 7 cut(s) | 11, 303, 1017, 1849, 2129, 2188, 3100 |
| SfcI | CTRYAG | 1 cut(s) | 30 |
| Sfr303I | CCGCGG | 1 cut(s) | 842 |
| SfuI | TTCGAA | 1 cut(s) | 2875 |
| SgrBI | CCGCGG | 1 cut(s) | 842 |
| SinI | GGWCC | 3 cut(s) | 261, 430, 1989 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| SmlI | CTYRAG | 4 cut(s) | 1472, 1861, 2139, 2639 |
| SmoI | CTYRAG | 4 cut(s) | 1472, 1861, 2139, 2639 |
| SphI | GCATGC | 1 cut(s) | 58 |
| SseBI | AGGCCT | 1 cut(s) | 2833 |
| SspI | AATATT | 1 cut(s) | 2332 |
| SspMI | CTAG | 4 cut(s) | 1719, 2174, 2189, 3306 |
| SstI | GAGCTC | 1 cut(s) | 2129 |
| StuI | AGGCCT | 1 cut(s) | 2833 |
| StyI | CCWWGG | 3 cut(s) | 2283, 2754, 3320 |
| TaaI | ACNGT | 8 cut(s) | 34, 640, 1421, 1450, 1627, 1690, 1742, 1978 |
| TaiI | ACGT | 5 cut(s) | 159, 836, 1635, 1846, 3316 |
| TaqII | GACCGA | 1 cut(s) | 622 |
| TatI | WGTACW | 4 cut(s) | 983, 2452, 2813, 3364 |
| TscAI | CASTG | 2 cut(s) | 815, 1521 |
| TseFI | GTSAC | 8 cut(s) | 178, 244, 332, 634, 829, 1516, 2222, 2906 |
| TseI | GCWGC | 9 cut(s) | 58, 135, 169, 906, 928, 1661, 2964, 3041, 3044 |
| Tsp45I | GTSAC | 8 cut(s) | 178, 244, 332, 634, 829, 1516, 2222, 2906 |
| TspDTI | ATGAA | 8 cut(s) | 1403, 1667, 1719, 1725, 1759, 2195, 3128, 3263 |
| TspGWI | ACGGA | 7 cut(s) | 136, 413, 668, 987, 2210, 2696, 3151 |
| TspRI | CASTG | 2 cut(s) | 815, 1521 |
| Tth111I | GACNNNGTC | 1 cut(s) | 25 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1340, 2903 |
| Vha464I | CTTAAG | 2 cut(s) | 1472, 1861 |
| VneI | GTGCAC | 2 cut(s) | 1013, 1845 |
| VpaK11BI | GGWCC | 3 cut(s) | 261, 430, 1989 |
| VspI | ATTAAT | 2 cut(s) | 2646, 3269 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1879 |
| XapI | RAATTY | 4 cut(s) | 1441, 1714, 2405, 2841 |
| XbaI | TCTAGA | 1 cut(s) | 1718 |
| XceI | RCATGY | 2 cut(s) | 58, 2753 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1920, 3291 |
| XmiI | GTMKAC | 1 cut(s) | 29 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3315 |
| XspI | CTAG | 4 cut(s) | 1719, 2174, 2189, 3306 |
| ZrmI | AGTACT | 1 cut(s) | 985 |
| Zsp2I | ATGCAT | 1 cut(s) | 3184 |