Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0010352

Physical Location & Seq

Genomic Coordinates Forward (+)

13911277 .. 13916235

Gene Structure 4959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g19500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCTGAGGATTTCTCCAAAGCCGTGGATGACGGTCTCAAGCTCTCCAAACGACTATACTTCGGGATCGATCGAGCGGTGTCGCCGCCGAAGCCGCCGCCGTCGATGGACAAAGAGACGTCGTGCGCGTTCCTCCCTAAGGCGCCGATGGTCTACGCGGTCATCTCCGACCCGGCCATCGTCGACAACCCGGACATCCCCAGCTACCAGCCCCACGTGCACGGAAGGTGTGACCCCCCGGCCCTCATTCCGCTGACGATGAACCGGGTCGAGCTCCAGGTCGATTGCTACATGGACACCGCCTTTATTCGGGTTTCCGGGTCGTGGAGGGTCCATTGCGTAAAGCCTAGCAAGGGCTGCGGTTGCCGCGTTGCCATTCCTATGGGTGAACAGGGTTCAATTCTAGGTGTTGAGGTCGACGTAAATGGTAAATCGTACCATACTCAACTCAGTCATTTGGAAGATGAGAAGGAGATGGAGAAGATGACCAATGCAGAGGGAGGCTTTCTCGGAGGCAAACCTCATATATTCACATTAACAACACCTCAGGTCAACGGAGGAGCCAATATCTCAATCAAAATGAGTTGGTCTCAGAAATTATCGTATTCAAATGGCGATTTCTCTTTGAATGTACCATTCACTTTTCCGGAGTATGTCATCCCCCCGGGAAAGAAGTACCTGAAAAAAGAAAAGATCCAATTAAACGTGAACTCTTGCGTTGGAACTGAAGTTTCGTGCAAGACAGTTAGTCATTCTTTGAAGGAATTACGGGGAATAAGCCAAGTTGGGAAATTGGGTTTTCTGTACGAGGCAGATGTTCTGAATTGGTCAAATACCAACTTTAATTTCTCATACACAGTCTTGTCGAGTCATACACTTGGTGCTGTTCTCGTGCAGTCACCGCCCATGCATGACATTGATCAAAGAGAAATCTTCTCTGTCTATCTTCTACCAATAAACGAGCAGAGCAGGAAGGTTTTCAGAAGGGATGTAGTGTTTGTTGTTGATATTAGTGGAAGTATGCAGGGAAAGCCACTTGATGATGTTAAGAATGTACTGTCTGCAGCCCTATTGAAGCTTCATCCAGAAGATTCGTTTTGCATTATAGCTTTTAATGGACAGACTTTTTTATCTTCCACATCAATGAAATCGGTTACCAAGGAGGCTGTTGAAAGGGCCATTGAGTGGATTGGCATAAATCTTGTTGCTGGCGGCGATACAGATATATTGCCTCCCCTTAACCAAGCAATAGAGATGCTATCCAATACTCGGGGTTCATTGCCTCTCATCTGCCTTGTTACTGATGGGTCTGTTCAAGATGAGAGGCACATTTGTGATGTAATGAAAAATCGTCTTACAGAAGCAGGTCCTATAGCTCCACGTATATACACTTTTGGAATAGGTACATTCTGCAACCATTATTTCCTGCGGATGCTTGCAATGATTGGCAGGGGCCAATATGATGCTGCGTACGATATAGATTTGGTCGAGTCTCAAATGCAGAGCTTATTTACCAGAGCCTCATCTGTGATTCTTACAAATATAACCCTTGAAACACTGGATGATCTTGATGATGTTGAGGTGTTCCCTTCCCATATTCCAGACCTCTCATCTGAGAGTCCATTAACTGTATCTGGCAAATTCCGAGGAAAGTTTCCCAGCTCACTTAAAGCTAAAGGCCTTCTACCCGATATGTCTAATATCGAGATTGATTTGAAGTTACAAGATGCAAAGGACATACCTCTTGACAGGGTATGTGCAAAAGGACAGATTGAGTTGCTGACTGCTCGGGCATGGTATGGAGATAACAAAGAGCTTGAGGATAAGGTAGCTAAACTGAGCATGCAGACCAATGTCGTGAGTGAGTATACGCGCATGGTGATACTTCACAAAGACCTATCTGGACCACAAGAGACATCAAAGAAAAACCACACAAACGAGACGAAAGACTCTGAAAAACCGACGTTGCTTCCAACACTATCCGTTGGCTTTGGCAACTTAGTGGCAACAGCCGAGAACATTCCTCCTGGATCCGAAGAACCAAAACTCCCAGAAGCTGCTGAAATTTTTGTGAGAGCAGCTTCGAGTTGCTGTGGCTCAATGTGGTACAGATGTTGTTGCATGGCCTGCATCCATTGTTGCTCCAAGGTAAATCCTCAATGTGCAAACGGACTCACCCAACTCTGCACTGGTCTGGCATGTGCCGGCTGCCTCAACTGCTGTGGCTTCTGCTGTCGTGGATGTTGTGGCGGAGATGGCGGATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

756

Amino Acids

82.6

Weight (kDa)

5.74

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19110
fragaria_vesca	FvH4_1g08960 FvH4_1g08960 FvH4_1g08960 FvH4_1g08960
malus_domestica	MD02G1095100.v1.1 MD15G1219900.v1.1
prunus_persica	Prupe.7G196100_v2.0.a1 Prupe.7G196100_v2.0.a1
pyrus_communis	pycom02g07510 pycom15g19500
rosa_chinensis	RchiOBHm_Chr2g0095411
rosa_laevigata	RLG00000016563
rosa_multiflora	Rmu_ssc0000183.1_g000044
rosa_roxburghii	Rroxscaffold_2G00146390
rosa_rugosa	Rorug02G0050700
rosa_samantha	Rh2AG098800 Rh2BG100000 Rh2CG102000 Rh2DG099600
rosa_wichuraiana	Rw2G007460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	122
Acc36I	ACCTGC	1 cut(s)	1355
AccB1I	GGYRCC	1 cut(s)	142
AccB7I	CCANNNNNTGG	1 cut(s)	1185
AccBSI	CCGCTC	1 cut(s)	77
AccI	GTMKAC	4 cut(s)	153, 183, 417, 1868
AccII	CGCG	4 cut(s)	128, 158, 369, 1873
AccIII	TCCGGA	1 cut(s)	646
AclWI	GGATC	4 cut(s)	74, 688, 2025, 2038
AcoI	YGGCCR	1 cut(s)	174
AcsI	RAATTY	2 cut(s)	1640, 2064
AcuI	CTGAAG	1 cut(s)	747
AcvI	CACGTG	1 cut(s)	217
AcyI	GRCGYC	2 cut(s)	119, 143
AdeI	CACNNNGTG	1 cut(s)	881
AfaI	GTAC	8 cut(s)	437, 633, 677, 806, 1056, 1405, 1472, 2108
AfiI	CCNNNNNNNGG	6 cut(s)	139, 309, 324, 353, 1185, 1269
AgsI	TTSAA	9 cut(s)	399, 609, 628, 760, 1075, 1172, 1316, 1553, 1717
AhdI	GACNNNNNGTC	1 cut(s)	747
AjnI	CCWGG	2 cut(s)	276, 2026
AjuI	GAANNNNNNNTTGG	2 cut(s)	830, 862
AleI	CACNNNNGTG	1 cut(s)	1332
AloI	GAACNNNNNNTCC	2 cut(s)	2031, 2063
Alw21I	GWGCWC	2 cut(s)	222, 276
Alw26I	GTCTC	6 cut(s)	41, 110, 594, 1497, 1907, 1934
Alw44I	GTGCAC	1 cut(s)	218
AlwI	GGATC	4 cut(s)	74, 688, 2025, 2038
AlwNI	CAGNNNCTG	1 cut(s)	2057
Ama87I	CYCGRG	3 cut(s)	664, 1269, 1788
Aor13HI	TCCGGA	1 cut(s)	646
AoxI	GGCC	6 cut(s)	174, 240, 1176, 1453, 1678, 2124
ApaLI	GTGCAC	1 cut(s)	218
ApeKI	GCWGC	6 cut(s)	357, 1064, 1466, 2057, 2078, 2208
ApoI	RAATTY	2 cut(s)	1640, 2064
Asp700I	GAANNNNTTC	1 cut(s)	977
AspLEI	GCGC	3 cut(s)	128, 145, 1875
AspS9I	GGNCC	6 cut(s)	241, 331, 1176, 1367, 1453, 1904
AsuC2I	CCSGG	7 cut(s)	173, 191, 239, 266, 319, 665, 666
AsuHPI	GGTGA	4 cut(s)	398, 891, 1891, 2167
AvaI	CYCGRG	3 cut(s)	664, 1269, 1788
AvaII	GGWCC	3 cut(s)	331, 1367, 1904
AxyI	CCTNAGG	2 cut(s)	138, 546
BaeGI	GKGCMC	1 cut(s)	222
BaeI	ACNNNNGTAYC	2 cut(s)	2098, 2131
BamHI	GGATCC	1 cut(s)	2030
BanI	GGYRCC	1 cut(s)	142
BanII	GRGCYC	1 cut(s)	276
BauI	CACGAG	1 cut(s)	890
BbrPI	CACGTG	1 cut(s)	217
Bbv12I	GWGCWC	2 cut(s)	222, 276
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	6 cut(s)	344, 1076, 1453, 2044, 2090, 2195
BccI	CCATC	6 cut(s)	100, 142, 185, 469, 1298, 2249
BceAI	ACGGC	2 cut(s)	8, 85
BciT130I	CCWGG	2 cut(s)	278, 2028
BclI	TGATCA	1 cut(s)	919
BcnI	CCSGG	7 cut(s)	173, 191, 239, 266, 319, 665, 666
BcoDI	GTCTC	6 cut(s)	41, 110, 594, 1497, 1907, 1934
BfaI	CTAG	2 cut(s)	348, 404
BfmI	CTRYAG	2 cut(s)	1062, 1371
BfoI	RGCGCY	1 cut(s)	146
BfuAI	ACCTGC	1 cut(s)	1355
Bme1390I	CCNGG	9 cut(s)	173, 191, 239, 266, 278, 319, 665, 666, 2028
Bme18I	GGWCC	3 cut(s)	331, 1367, 1904
BmeRI	GACNNNNNGTC	1 cut(s)	747
BmeT110I	CYCGRG	3 cut(s)	664, 1269, 1788
BmgT120I	GGNCC	6 cut(s)	241, 331, 1176, 1367, 1453, 1904
BmiI	GGNNCC	5 cut(s)	144, 332, 562, 1454, 2032
BmrFI	CCNGG	9 cut(s)	173, 191, 239, 266, 278, 319, 665, 666, 2028
BmsI	GCATC	5 cut(s)	1245, 1422, 1453, 1717, 2139
BoxI	GACNNNNGTC	1 cut(s)	1853
BplI	GAGNNNNNCTC	5 cut(s)	31, 492, 524, 574, 606
BpmI	CTGGAG	1 cut(s)	260
Bpu10I	CCTNAGC	1 cut(s)	6
BpuEI	CTTGAG	2 cut(s)	23, 1838
BpuMI	CCSGG	7 cut(s)	173, 191, 239, 266, 319, 665, 666
Bsa29I	ATCGAT	1 cut(s)	69
BsaAI	YACGTR	2 cut(s)	217, 1382
BsaHI	GRCGYC	2 cut(s)	119, 143
BsaI	GGTCTC	2 cut(s)	41, 594
BsaJI	CCNNGG	7 cut(s)	24, 237, 663, 664, 1158, 1645, 2145
BsaWI	WCCGGW	1 cut(s)	646
BsaXI	ACNNNNNCTCC	2 cut(s)	2031, 2061
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 309, 324, 353, 1185, 1269
Bse118I	RCCGGY	1 cut(s)	2204
Bse1I	ACTGG	2 cut(s)	1563, 2194
Bse21I	CCTNAGG	2 cut(s)	138, 546
Bse3DI	GCAATG	3 cut(s)	334, 1277, 1446
BseAI	TCCGGA	1 cut(s)	646
BseBI	CCWGG	2 cut(s)	278, 2028
BseCI	ATCGAT	1 cut(s)	69
BseDI	CCNNGG	7 cut(s)	24, 237, 663, 664, 1158, 1645, 2145
BseGI	GGATG	9 cut(s)	34, 195, 657, 994, 1081, 1437, 1567, 2130, 2246
BseLI	CCNNNNNNNGG	6 cut(s)	139, 309, 324, 353, 1185, 1269
BseMI	GCAATG	3 cut(s)	334, 1277, 1446
BseMII	CTCAG	5 cut(s)	463, 560, 605, 1605, 1829
BseNI	ACTGG	2 cut(s)	1563, 2194
BseRI	GAGGAG	1 cut(s)	573
BseSI	GKGCMC	1 cut(s)	222
BseXI	GCAGC	6 cut(s)	344, 1076, 1453, 2044, 2090, 2195
BseYI	CCCAGC	2 cut(s)	200, 1658
BsgI	GTGCAG	2 cut(s)	914, 2170
Bsh1236I	CGCG	4 cut(s)	128, 158, 369, 1873
Bsh1285I	CGRYCG	1 cut(s)	73
BshFI	GGCC	6 cut(s)	176, 242, 1178, 1455, 1680, 2126
BshNI	GGYRCC	1 cut(s)	142
BshVI	ATCGAT	1 cut(s)	69
BsiEI	CGRYCG	1 cut(s)	73
BsiHKAI	GWGCWC	2 cut(s)	222, 276
BsiHKCI	CYCGRG	3 cut(s)	664, 1269, 1788
BsiSI	CCGG	8 cut(s)	173, 191, 239, 265, 318, 647, 665, 2205
BsiWI	CGTACG	1 cut(s)	1470
BslI	CCNNNNNNNGG	6 cut(s)	139, 309, 324, 353, 1185, 1269
BsmAI	GTCTC	6 cut(s)	41, 110, 594, 1497, 1907, 1934
BsmBI	CGTCTC	2 cut(s)	110, 1934
BsnI	GGCC	6 cut(s)	176, 242, 1178, 1455, 1680, 2126
Bso31I	GGTCTC	2 cut(s)	41, 594
BsoBI	CYCGRG	3 cut(s)	664, 1269, 1788
Bsp1286I	GDGCHC	2 cut(s)	222, 276
Bsp13I	TCCGGA	1 cut(s)	646
Bsp143I	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
BspANI	GGCC	6 cut(s)	176, 242, 1178, 1455, 1680, 2126
BspCNI	CTCAG	5 cut(s)	462, 559, 604, 1606, 1830
BspDI	ATCGAT	1 cut(s)	69
BspEI	TCCGGA	1 cut(s)	646
BspFNI	CGCG	4 cut(s)	128, 158, 369, 1873
BspLI	GGNNCC	5 cut(s)	144, 332, 562, 1454, 2032
BspMAI	CTGCAG	1 cut(s)	1066
BspMI	ACCTGC	1 cut(s)	1355
BspPI	GGATC	4 cut(s)	74, 688, 2025, 2038
BspT107I	GGYRCC	1 cut(s)	142
BspTNI	GGTCTC	2 cut(s)	41, 594
BsrBI	CCGCTC	1 cut(s)	77
BsrDI	GCAATG	3 cut(s)	334, 1277, 1446
BsrFI	RCCGGY	1 cut(s)	2204
BsrI	ACTGG	2 cut(s)	1563, 2194
BssAI	RCCGGY	1 cut(s)	2204
BssECI	CCNNGG	7 cut(s)	24, 237, 663, 664, 1158, 1645, 2145
BssMI	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
BssNAI	GTATAC	1 cut(s)	1869
BssNI	GRCGYC	2 cut(s)	119, 143
BssSI	CACGAG	1 cut(s)	890
BssT1I	CCWWGG	2 cut(s)	1158, 2145
Bst1107I	GTATAC	1 cut(s)	1869
Bst2BI	CACGAG	1 cut(s)	890
Bst2UI	CCWGG	2 cut(s)	278, 2028
Bst4CI	ACNGT	5 cut(s)	35, 745, 859, 1059, 1630
BstACI	GRCGYC	2 cut(s)	119, 143
BstAPI	GCANNNNNTGC	2 cut(s)	357, 2127
BstBAI	YACGTR	2 cut(s)	217, 1382
BstC8I	GCNNGC	5 cut(s)	1210, 1437, 1844, 2128, 2206
BstDEI	CTNAG	8 cut(s)	6, 138, 449, 546, 591, 1614, 1838, 1999
BstDSI	CCRYGG	1 cut(s)	24
BstEII	GGTNACC	1 cut(s)	1153
BstENI	CCTNNNNNAGG	1 cut(s)	137
BstF5I	GGATG	9 cut(s)	34, 195, 657, 994, 1081, 1437, 1567, 2130, 2246
BstFNI	CGCG	4 cut(s)	128, 158, 369, 1873
BstH2I	RGCGCY	1 cut(s)	146
BstHHI	GCGC	3 cut(s)	128, 145, 1875
BstKTI	GATC	7 cut(s)	69, 73, 696, 922, 1567, 2033, 2264
BstMAI	GTCTC	6 cut(s)	41, 110, 594, 1497, 1907, 1934
BstMBI	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
BstMCI	CGRYCG	1 cut(s)	73
BstNI	CCWGG	2 cut(s)	278, 2028
BstNSI	RCATGY	2 cut(s)	1846, 2202
BstPAI	GACNNNNGTC	1 cut(s)	1853
BstPI	GGTNACC	1 cut(s)	1153
BstSCI	CCNGG	9 cut(s)	171, 189, 237, 264, 276, 317, 663, 664, 2026
BstSFI	CTRYAG	2 cut(s)	1062, 1371
BstSLI	GKGCMC	1 cut(s)	222
BstUI	CGCG	4 cut(s)	128, 158, 369, 1873
BstV1I	GCAGC	6 cut(s)	344, 1076, 1453, 2044, 2090, 2195
BstX2I	RGATCY	2 cut(s)	693, 2030
BstXI	CCANNNNNNTGG	2 cut(s)	25, 382
BstYI	RGATCY	2 cut(s)	693, 2030
BstZ17I	GTATAC	1 cut(s)	1869
Bsu15I	ATCGAT	1 cut(s)	69
Bsu36I	CCTNAGG	2 cut(s)	138, 546
BsuRI	GGCC	6 cut(s)	176, 242, 1178, 1455, 1680, 2126
BsuTUI	ATCGAT	1 cut(s)	69
BtgI	CCRYGG	1 cut(s)	24
BtsCI	GGATG	9 cut(s)	34, 195, 657, 994, 1081, 1437, 1567, 2130, 2246
BtsIMutI	CAGTG	2 cut(s)	1556, 2187
BveI	ACCTGC	1 cut(s)	1355
Cac8I	GCNNGC	5 cut(s)	1210, 1437, 1844, 2128, 2206
CaiI	CAGNNNCTG	1 cut(s)	2057
CfoI	GCGC	3 cut(s)	128, 145, 1875
Cfr10I	RCCGGY	1 cut(s)	2204
Cfr13I	GGNCC	6 cut(s)	241, 331, 1176, 1367, 1453, 1904
Cfr9I	CCCGGG	1 cut(s)	664
ClaI	ATCGAT	1 cut(s)	69
Csp6I	GTAC	8 cut(s)	436, 632, 676, 805, 1055, 1404, 1471, 2107
CspCI	CAANNNNNGTGG	2 cut(s)	2203, 2238
CviAII	CATG	8 cut(s)	292, 907, 911, 1794, 1843, 1876, 2122, 2199
CviQI	GTAC	8 cut(s)	436, 632, 676, 805, 1055, 1404, 1471, 2107
DdeI	CTNAG	8 cut(s)	6, 138, 449, 546, 591, 1614, 1838, 1999
DinI	GGCGCC	1 cut(s)	144
DpnI	GATC	7 cut(s)	68, 72, 695, 921, 1566, 2032, 2263
DpnII	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
DraIII	CACNNNGTG	1 cut(s)	881
DriI	GACNNNNNGTC	1 cut(s)	747
EaeI	YGGCCR	1 cut(s)	174
Eam1105I	GACNNNNNGTC	1 cut(s)	747
EciI	GGCGGA	1 cut(s)	2265
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	2 cut(s)	1158, 2145
Eco147I	AGGCCT	1 cut(s)	1680
Eco24I	GRGCYC	1 cut(s)	276
Eco31I	GGTCTC	2 cut(s)	41, 594
Eco47I	GGWCC	3 cut(s)	331, 1367, 1904
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	1 cut(s)	747
Eco72I	CACGTG	1 cut(s)	217
Eco81I	CCTNAGG	2 cut(s)	138, 546
Eco88I	CYCGRG	3 cut(s)	664, 1269, 1788
Eco91I	GGTNACC	1 cut(s)	1153
EcoICRI	GAGCTC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	1 cut(s)	137
EcoO109I	RGGNCCY	1 cut(s)	1367
EcoO65I	GGTNACC	1 cut(s)	1153
EcoRII	CCWGG	2 cut(s)	276, 2026
EcoT14I	CCWWGG	2 cut(s)	1158, 2145
EcoT22I	ATGCAT	1 cut(s)	912
EcoT38I	GRGCYC	1 cut(s)	276
EgeI	GGCGCC	1 cut(s)	144
EheI	GGCGCC	1 cut(s)	144
ErhI	CCWWGG	2 cut(s)	1158, 2145
Esp3I	CGTCTC	2 cut(s)	110, 1934
FaeI	CATG	8 cut(s)	295, 910, 914, 1797, 1846, 1879, 2125, 2202
FatI	CATG	8 cut(s)	291, 906, 910, 1793, 1842, 1875, 2121, 2198
FbaI	TGATCA	1 cut(s)	919
FblI	GTMKAC	4 cut(s)	153, 183, 417, 1868
FokI	GGATG	9 cut(s)	41, 182, 644, 1001, 1068, 1444, 1574, 2117, 2253
FriOI	GRGCYC	1 cut(s)	276
FspBI	CTAG	2 cut(s)	348, 404
GlaI	GCGC	3 cut(s)	127, 144, 1874
GsaI	CCCAGC	2 cut(s)	204, 1662
GsuI	CTGGAG	1 cut(s)	260
HaeII	RGCGCY	1 cut(s)	146
HaeIII	GGCC	6 cut(s)	176, 242, 1178, 1455, 1680, 2126
HapII	CCGG	8 cut(s)	173, 191, 239, 265, 318, 647, 665, 2205
HhaI	GCGC	3 cut(s)	128, 145, 1875
Hin1I	GRCGYC	2 cut(s)	119, 143
Hin1II	CATG	8 cut(s)	295, 910, 914, 1797, 1846, 1879, 2125, 2202
Hin6I	GCGC	3 cut(s)	126, 143, 1873
HinP1I	GCGC	3 cut(s)	126, 143, 1873
HincII	GTYRAC	3 cut(s)	184, 418, 553
HindII	GTYRAC	3 cut(s)	184, 418, 553
HindIII	AAGCTT	1 cut(s)	1076
HinfI	GANTC	7 cut(s)	868, 1091, 1490, 1531, 1618, 1949, 2172
HpaII	CCGG	8 cut(s)	173, 191, 239, 265, 318, 647, 665, 2205
HphI	GGTGA	4 cut(s)	398, 891, 1891, 2167
Hpy166II	GTNNAC	8 cut(s)	154, 184, 220, 389, 418, 553, 709, 1869
Hpy188I	TCNGA	9 cut(s)	169, 512, 594, 822, 983, 1615, 1646, 1954, 2035
Hpy8I	GTNNAC	8 cut(s)	154, 184, 220, 389, 418, 553, 709, 1869
Hpy99I	CGWCG	5 cut(s)	106, 124, 185, 422, 1966
HpyAV	CCTTC	7 cut(s)	219, 463, 754, 967, 978, 1599, 1691
HpyCH4III	ACNGT	5 cut(s)	35, 745, 859, 1059, 1630
HpyCH4IV	ACGT	6 cut(s)	119, 216, 420, 705, 1381, 1964
HpyF3I	CTNAG	8 cut(s)	6, 138, 449, 546, 591, 1614, 1838, 1999
HpySE526I	ACGT	6 cut(s)	119, 216, 420, 705, 1381, 1964
Hsp92I	GRCGYC	2 cut(s)	119, 143
Hsp92II	CATG	8 cut(s)	295, 910, 914, 1797, 1846, 1879, 2125, 2202
HspAI	GCGC	3 cut(s)	126, 143, 1873
KasI	GGCGCC	1 cut(s)	142
Kpn2I	TCCGGA	1 cut(s)	646
KroI	GCCGGC	1 cut(s)	2204
KroNI	GCCGGC	1 cut(s)	2206
Ksp22I	TGATCA	1 cut(s)	919
Kzo9I	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
LmnI	GCTCC	4 cut(s)	279, 560, 1381, 2147
Lsp1109I	GCAGC	6 cut(s)	344, 1076, 1453, 2044, 2090, 2195
LweI	GCATC	5 cut(s)	1245, 1422, 1453, 1717, 2139
MaeI	CTAG	2 cut(s)	348, 404
MaeII	ACGT	6 cut(s)	119, 216, 420, 705, 1381, 1964
MaeIII	GTNAC	5 cut(s)	230, 897, 1153, 1297, 1719
MalI	GATC	7 cut(s)	68, 72, 695, 921, 1566, 2032, 2263
MbiI	CCGCTC	1 cut(s)	77
MboI	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
MboII	GAAGA	7 cut(s)	473, 493, 925, 938, 1100, 1125, 2048
MflI	RGATCY	2 cut(s)	693, 2030
MhlI	GDGCHC	2 cut(s)	222, 276
MluCI	AATT	9 cut(s)	399, 596, 698, 764, 791, 823, 844, 1640, 2064
Mly113I	GGCGCC	1 cut(s)	143
MlyI	GAGTC	5 cut(s)	877, 1499, 1627, 1943, 2166
MmeI	TCCRAC	3 cut(s)	192, 700, 1997
Mph1103I	ATGCAT	1 cut(s)	912
MroI	TCCGGA	1 cut(s)	646
MroNI	GCCGGC	1 cut(s)	2204
MroXI	GAANNNNTTC	1 cut(s)	977
MseI	TTAA	8 cut(s)	536, 701, 843, 1047, 1113, 1239, 1625, 1668
MslI	CAYNNNNRTG	3 cut(s)	380, 1142, 1332
MspA1I	CMGCKG	1 cut(s)	253
MspI	CCGG	8 cut(s)	173, 191, 239, 265, 318, 647, 665, 2205
MspR9I	CCNGG	9 cut(s)	173, 191, 239, 266, 278, 319, 665, 666, 2028
MvaI	CCWGG	2 cut(s)	278, 2028
MvnI	CGCG	4 cut(s)	128, 158, 369, 1873
NaeI	GCCGGC	1 cut(s)	2206
NarI	GGCGCC	1 cut(s)	143
NciI	CCSGG	7 cut(s)	173, 191, 239, 266, 319, 665, 666
NdeII	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
NgoMIV	GCCGGC	1 cut(s)	2204
NlaIII	CATG	8 cut(s)	295, 910, 914, 1797, 1846, 1879, 2125, 2202
NlaIV	GGNNCC	5 cut(s)	144, 332, 562, 1454, 2032
NmeAIII	GCCGAG	1 cut(s)	2038
NmuCI	GTSAC	2 cut(s)	230, 897
NsiI	ATGCAT	1 cut(s)	912
NspI	RCATGY	2 cut(s)	1846, 2202
OliI	CACNNNNGTG	1 cut(s)	1332
PaeI	GCATGC	1 cut(s)	1846
PceI	AGGCCT	1 cut(s)	1680
PcsI	WCGNNNNNNNCGW	1 cut(s)	125
PdiI	GCCGGC	1 cut(s)	2206
PdmI	GAANNNNTTC	1 cut(s)	977
PfeI	GAWTC	2 cut(s)	1091, 1531
Pfl23II	CGTACG	1 cut(s)	1470
PflMI	CCANNNNNTGG	1 cut(s)	1185
PfoI	TCCNGGA	1 cut(s)	2026
Ple19I	CGATCG	1 cut(s)	73
PleI	GAGTC	5 cut(s)	876, 1498, 1626, 1943, 2166
PluTI	GGCGCC	1 cut(s)	146
PmaCI	CACGTG	1 cut(s)	217
PmlI	CACGTG	1 cut(s)	217
PpsI	GAGTC	5 cut(s)	876, 1498, 1626, 1943, 2166
Ppu21I	YACGTR	2 cut(s)	217, 1382
PpuMI	RGGWCCY	1 cut(s)	1367
PshAI	GACNNNNGTC	1 cut(s)	1853
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	1367
Psp6I	CCWGG	2 cut(s)	276, 2026
PspCI	CACGTG	1 cut(s)	217
PspEI	GGTNACC	1 cut(s)	1153
PspFI	CCCAGC	2 cut(s)	200, 1658
PspGI	CCWGG	2 cut(s)	276, 2026
PspLI	CGTACG	1 cut(s)	1470
PspN4I	GGNNCC	5 cut(s)	144, 332, 562, 1454, 2032
PspPI	GGNCC	6 cut(s)	241, 331, 1176, 1367, 1453, 1904
PspPPI	RGGWCCY	1 cut(s)	1367
PstI	CTGCAG	1 cut(s)	1066
PstNI	CAGNNNCTG	1 cut(s)	2057
PsuI	RGATCY	2 cut(s)	693, 2030
PvuI	CGATCG	1 cut(s)	73
RsaI	GTAC	8 cut(s)	437, 633, 677, 806, 1056, 1405, 1472, 2108
RsaNI	GTAC	8 cut(s)	436, 632, 676, 805, 1055, 1404, 1471, 2107
RseI	CAYNNNNRTG	3 cut(s)	380, 1142, 1332
SacI	GAGCTC	1 cut(s)	276
SalI	GTCGAC	2 cut(s)	182, 416
SaqAI	TTAA	8 cut(s)	536, 701, 843, 1047, 1113, 1239, 1625, 1668
Sau3AI	GATC	7 cut(s)	66, 70, 693, 919, 1564, 2030, 2261
Sau96I	GGNCC	6 cut(s)	241, 331, 1176, 1367, 1453, 1904
SchI	GAGTC	5 cut(s)	877, 1499, 1627, 1943, 2166
ScrFI	CCNGG	9 cut(s)	173, 191, 239, 266, 278, 319, 665, 666, 2028
SduI	GDGCHC	2 cut(s)	222, 276
SfaNI	GCATC	5 cut(s)	1245, 1422, 1453, 1717, 2139
SfcI	CTRYAG	2 cut(s)	1062, 1371
SfoI	GGCGCC	1 cut(s)	144
SinI	GGWCC	3 cut(s)	331, 1367, 1904
SmaI	CCCGGG	1 cut(s)	666
SmiMI	CAYNNNNRTG	3 cut(s)	380, 1142, 1332
SmlI	CTYRAG	2 cut(s)	38, 1817
SmoI	CTYRAG	2 cut(s)	38, 1817
SphI	GCATGC	1 cut(s)	1846
Sse9I	AATT	9 cut(s)	399, 596, 698, 764, 791, 823, 844, 1640, 2064
SseBI	AGGCCT	1 cut(s)	1680
SspDI	GGCGCC	1 cut(s)	142
SspMI	CTAG	2 cut(s)	348, 404
SstI	GAGCTC	1 cut(s)	276
StuI	AGGCCT	1 cut(s)	1680
StyD4I	CCNGG	9 cut(s)	171, 189, 237, 264, 276, 317, 663, 664, 2026
StyI	CCWWGG	2 cut(s)	1158, 2145
TaaI	ACNGT	5 cut(s)	35, 745, 859, 1059, 1630
TaiI	ACGT	6 cut(s)	122, 219, 423, 708, 1384, 1967
TasI	AATT	9 cut(s)	399, 596, 698, 764, 791, 823, 844, 1640, 2064
TatI	WGTACW	1 cut(s)	1054
TauI	GCSGC	5 cut(s)	88, 97, 100, 369, 1215
TfiI	GAWTC	2 cut(s)	1091, 1531
Tru1I	TTAA	8 cut(s)	536, 701, 843, 1047, 1113, 1239, 1625, 1668
Tru9I	TTAA	8 cut(s)	536, 701, 843, 1047, 1113, 1239, 1625, 1668
TscAI	CASTG	2 cut(s)	1563, 2194
TseFI	GTSAC	2 cut(s)	230, 897
TseI	GCWGC	6 cut(s)	357, 1064, 1466, 2057, 2078, 2208
Tsp45I	GTSAC	2 cut(s)	230, 897
TspDTI	ATGAA	5 cut(s)	275, 1070, 1160, 1266, 1358
TspGWI	ACGGA	4 cut(s)	237, 570, 1972, 2184
TspMI	CCCGGG	1 cut(s)	664
TspRI	CASTG	2 cut(s)	1563, 2194
Van91I	CCANNNNNTGG	1 cut(s)	1185
VneI	GTGCAC	1 cut(s)	218
VpaK11BI	GGWCC	3 cut(s)	331, 1367, 1904
XagI	CCTNNNNNAGG	1 cut(s)	137
XapI	RAATTY	2 cut(s)	1640, 2064
XceI	RCATGY	2 cut(s)	1846, 2202
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2186
XmaI	CCCGGG	1 cut(s)	664
XmiI	GTMKAC	4 cut(s)	153, 183, 417, 1868
XmnI	GAANNNNTTC	1 cut(s)	977
XspI	CTAG	2 cut(s)	348, 404
ZraI	GACGTC	1 cut(s)	120
Zsp2I	ATGCAT	1 cut(s)	912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.