Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0010352

Physical Location & Seq

Genomic Coordinates Forward (+)

8002398 .. 8008236

Gene Structure 5839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG099600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGCCGAGGAGTTCTCCAAAGCCGTCGACGACGGTCTCCGGCTCTCGAAAAGACTATACTTCGGGAAGGATCGAGCCGTAGCGCCGCCGAGGCCGCCGCCGGTCATGGACAAGTCGGCGTCGTCGTCGGGGTGCGCCTACCTCCCGACGTCTCCGATGGTGTACGCCGTGATATCGGACCCGAGGATCGTCGACAACCCGGACATCCCGAGCTACCAGCCGCACGTGCACGGCAGGTGCGACCCGCCGGCGCTCATTCCGCTTCCGATGAACAGGGTTGAGCTGGAGGTCGATTGCTTCATGGACACCGCCTTTATTCGGGTCACCGGGTCGTGGAGGGTCCATTGCGTCAAGAGCTCCAGGAGCTGTGCCTGCCGGATTGCCATCCCTATGGGCGAACAGGGTTCAATTCTAGGTGTTGAGGTCGACATTTCTGGTAAATCATTCTATACTCAGTTAAGTCAATTGAAAGATGACACGGATATGAGCAAGGTTCCCCAAGGAGAAGGAGGCTTTCTCAATGTTAAACCTCATATATTCACATTGACAACTCCGCCGGTTGATGGGGGAGTCAATCTCACAATTAAAATGAGTTGGTCTCAGAAGTTATTGTATCGAAATGGAGAGTTCTCTTTAGATATACCGTTCACATTTCCGGAGTTTGTCATTCCTCCAGGAAAGAAGTACCTGAAAAAGGAAAAGATTGAATTGAATGTGAACTCTGGTCTGGGAACTGAAATTTTATTCAAGGGAACTAGTCATCTTTTGAAGGAAGTACAGAGCCAAGAAGGAAAATTGGGGTTTAAATACGAGGGAAATGTTGTCAACTGGTCTAGTACCGACTTCCACTTCTCATATGCGGTCTCTTCAAGCCAAATACATGGCACTGTTATCACGCAGTCACCTTCCAAGGATGATGTTGATCAAAGAGAGATTTTCTCTGCCTATCTTCTTCCTGGAAACCAGCGAAGTGGAAAGGGTTTCAGAAGGAATGTAGTCGTTGTTGTTGATATAAGTGGAAGTATGCAGGGAAAGCCACTTGAAGATACTCAGAATGCACTATCTGAAGCCCTCTCTAAACTTGATTCAGAAGATTCATTCTGCATTATAGCTTTTAATGGACAGACTTATGTTTCATCTACATCATTGAAATCGGCTACCAAGGAGGCAGTTGAATCAGCCATTGAGTGGATTGGCATCAACTTTATTGCTGGTGGTGATACAAATATTATGCGTCCCCTTAACATGGCAATAGAGATGCTATCCAACTCTAGGGGTTCACTTCCTATCATATTTCTGGTTACTGATGGGGCAGTTGAAGATGAGAGACAAATATGTGATGAAATAAAAAAGCGTCTTGCAAGTGAGGATGCGATATCCCCTCGTATATACACTTTTGGAATAGGTTCGTTCTGCAACCATTATTTCCTGCGGATGCTATCAACAATTGGAAGGGGCCAATATGATGCTGCCTATGATATAGATTTGGTTCAGCCTCGAATACAGAACTTATTTGTGAGAGCTTCATCTGTGATTCTTACAAATATAACACTTGAGACATTGGACAATCTTGATGATGTTGAGGTGCTTCCTTGCCATATTCCAGACCTCTCATTTGAGAGTCCATTAAGTGTATCTGGCAGATTCCGAGGCAAGTTACCTGAGACCTTCAAAGTTAAAGGATTCTCAGCTGATATGTCGAATATTGTGATCGATTTGAAAGTACAAGATGCAAAGGACATACCTCTTCACAGGGTATGTGCAAAAGGAGAGATTGAGTTACTGACTGCTCAGGCATGGCTGTCAGAGAACAAGCAGCTTGAGGATAAGGTTAGTCATCAGGTGCTCTTACATCCACCCTCCATGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

623

Amino Acids

68.86

Weight (kDa)

5.59

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VWA	PF00092	331 - 485	5.7e-13	von Willebrand factor type A domain
VWA_3	PF13768	331 - 489	1.6e-11	von Willebrand factor type A domain
VWA_2	PF13519	332 - 437	1.4e-11	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19110
fragaria_vesca	FvH4_1g08960 FvH4_1g08960 FvH4_1g08960 FvH4_1g08960
malus_domestica	MD02G1095100.v1.1 MD15G1219900.v1.1
prunus_persica	Prupe.7G196100_v2.0.a1 Prupe.7G196100_v2.0.a1
pyrus_communis	pycom02g07510 pycom15g19500
rosa_chinensis	RchiOBHm_Chr2g0095411
rosa_laevigata	RLG00000016563
rosa_multiflora	Rmu_ssc0000183.1_g000044
rosa_roxburghii	Rroxscaffold_2G00146390
rosa_rugosa	Rorug02G0050700
rosa_samantha	Rh2AG098800 Rh2BG100000 Rh2CG102000 Rh2DG099600
rosa_wichuraiana	Rw2G007460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	225
AatII	GACGTC	1 cut(s)	152
Acc36I	ACCTGC	1 cut(s)	225
AccB7I	CCANNNNNTGG	1 cut(s)	1188
AccI	GTMKAC	3 cut(s)	27, 192, 426
AccIII	TCCGGA	1 cut(s)	655
AclWI	GGATC	2 cut(s)	78, 194
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	738
AcuI	CTGAAG	1 cut(s)	1086
AcvI	CACGTG	1 cut(s)	226
AcyI	GRCGYC	2 cut(s)	119, 149
AfaI	GTAC	5 cut(s)	164, 686, 777, 838, 1725
AfiI	CCNNNNNNNGG	7 cut(s)	318, 333, 563, 694, 1188, 1246, 1272
AhlI	ACTAGT	1 cut(s)	755
AjnI	CCWGG	3 cut(s)	359, 673, 955
AluBI	AGCT	8 cut(s)	213, 283, 357, 366, 1112, 1523, 1691, 1819
AluI	AGCT	8 cut(s)	213, 283, 357, 366, 1112, 1523, 1691, 1819
Alw21I	GWGCWC	3 cut(s)	231, 359, 1848
Alw26I	GTCTC	7 cut(s)	41, 156, 603, 868, 1321, 1550, 1658
Alw44I	GTGCAC	1 cut(s)	227
AlwI	GGATC	2 cut(s)	78, 194
AlwNI	CAGNNNCTG	1 cut(s)	366
Ama87I	CYCGRG	2 cut(s)	181, 208
Aor13HI	TCCGGA	1 cut(s)	655
AoxI	GGCC	3 cut(s)	3, 92, 1456
ApaLI	GTGCAC	1 cut(s)	227
ApeKI	GCWGC	2 cut(s)	1469, 1816
ApoI	RAATTY	1 cut(s)	738
ArsI	GACNNNNNNTTYG	2 cut(s)	1598, 1630
Asp700I	GAANNNNTTC	1 cut(s)	1405
AspLEI	GCGC	3 cut(s)	85, 137, 253
AspS9I	GGNCC	3 cut(s)	178, 340, 1456
AsuC2I	CCSGG	2 cut(s)	200, 328
AsuHPI	GGTGA	3 cut(s)	316, 894, 1229
AvaI	CYCGRG	2 cut(s)	181, 208
AvaII	GGWCC	2 cut(s)	178, 340
BaeGI	GKGCMC	1 cut(s)	231
BanII	GRGCYC	1 cut(s)	359
BbrPI	CACGTG	1 cut(s)	226
Bbv12I	GWGCWC	3 cut(s)	231, 359, 1848
BbvI	GCAGC	2 cut(s)	1456, 1828
BccI	CCATC	4 cut(s)	151, 392, 557, 1301
BceAI	ACGGC	4 cut(s)	8, 62, 152, 247
BciT130I	CCWGG	3 cut(s)	361, 675, 957
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	2 cut(s)	200, 328
BcoDI	GTCTC	7 cut(s)	41, 156, 603, 868, 1321, 1550, 1658
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	4 cut(s)	413, 756, 834, 1272
BfoI	RGCGCY	2 cut(s)	86, 254
BfuAI	ACCTGC	1 cut(s)	225
BglI	GCCNNNNNGGC	1 cut(s)	91
BisI	GCNGC	6 cut(s)	86, 95, 98, 221, 1470, 1817
BlsI	GCNGC	6 cut(s)	87, 96, 99, 222, 1471, 1818
Bme1390I	CCNGG	5 cut(s)	200, 328, 361, 675, 957
Bme18I	GGWCC	2 cut(s)	178, 340
BmeT110I	CYCGRG	2 cut(s)	181, 208
BmgT120I	GGNCC	3 cut(s)	178, 340, 1456
BmiI	GGNNCC	4 cut(s)	180, 341, 495, 1457
BmrFI	CCNGG	5 cut(s)	200, 328, 361, 675, 957
BmsI	GCATC	6 cut(s)	1206, 1248, 1360, 1425, 1456, 1720
BoxI	GACNNNNGTC	1 cut(s)	33
BplI	GAGNNNNNCTC	9 cut(s)	31, 501, 533, 561, 593, 583, 615, 923, 955
BpmI	CTGGAG	3 cut(s)	305, 343, 657
Bpu10I	CCTNAGC	1 cut(s)	1791
BpuEI	CTTGAG	2 cut(s)	1574, 1841
BpuMI	CCSGG	2 cut(s)	200, 328
Bsa29I	ATCGAT	1 cut(s)	1713
BsaAI	YACGTR	1 cut(s)	226
BsaBI	GATNNNNATC	3 cut(s)	383, 921, 1196
BsaHI	GRCGYC	2 cut(s)	119, 149
BsaI	GGTCTC	4 cut(s)	41, 603, 868, 1658
BsaJI	CCNNGG	7 cut(s)	6, 89, 182, 499, 909, 1161, 1648
BsaWI	WCCGGW	1 cut(s)	655
Bsc4I	CCNNNNNNNGG	7 cut(s)	318, 333, 563, 694, 1188, 1246, 1272
Bse118I	RCCGGY	3 cut(s)	100, 247, 556
Bse1I	ACTGG	1 cut(s)	833
Bse3DI	GCAATG	1 cut(s)	343
Bse8I	GATNNNNATC	3 cut(s)	383, 921, 1196
BseAI	TCCGGA	1 cut(s)	655
BseBI	CCWGG	3 cut(s)	361, 675, 957
BseCI	ATCGAT	1 cut(s)	1713
BseDI	CCNNGG	7 cut(s)	6, 89, 182, 499, 909, 1161, 1648
BseGI	GGATG	6 cut(s)	204, 384, 919, 1375, 1440, 1852
BseJI	GATNNNNATC	3 cut(s)	383, 921, 1196
BseLI	CCNNNNNNNGG	7 cut(s)	318, 333, 563, 694, 1188, 1246, 1272
BseMI	GCAATG	1 cut(s)	343
BseMII	CTCAG	6 cut(s)	467, 614, 1064, 1653, 1701, 1805
BseNI	ACTGG	1 cut(s)	833
BseRI	GAGGAG	1 cut(s)	23
BseSI	GKGCMC	1 cut(s)	231
BseXI	GCAGC	2 cut(s)	1456, 1828
BshFI	GGCC	3 cut(s)	5, 94, 1458
BshVI	ATCGAT	1 cut(s)	1713
BsiHKAI	GWGCWC	3 cut(s)	231, 359, 1848
BsiHKCI	CYCGRG	2 cut(s)	181, 208
BsiSI	CCGG	8 cut(s)	40, 101, 200, 248, 327, 376, 557, 656
BslFI	GGGAC	1 cut(s)	1221
BslI	CCNNNNNNNGG	7 cut(s)	318, 333, 563, 694, 1188, 1246, 1272
BsmAI	GTCTC	7 cut(s)	41, 156, 603, 868, 1321, 1550, 1658
BsmBI	CGTCTC	1 cut(s)	156
BsmFI	GGGAC	1 cut(s)	1221
BsmI	GAATGC	1 cut(s)	1060
BsnI	GGCC	3 cut(s)	5, 94, 1458
Bso31I	GGTCTC	4 cut(s)	41, 603, 868, 1658
BsoBI	CYCGRG	2 cut(s)	181, 208
Bsp1286I	GDGCHC	3 cut(s)	231, 359, 1848
Bsp13I	TCCGGA	1 cut(s)	655
Bsp143I	GATC	4 cut(s)	70, 186, 922, 1710
BspANI	GGCC	3 cut(s)	5, 94, 1458
BspCNI	CTCAG	6 cut(s)	466, 613, 1063, 1654, 1700, 1804
BspDI	ATCGAT	1 cut(s)	1713
BspEI	TCCGGA	1 cut(s)	655
BspLI	GGNNCC	4 cut(s)	180, 341, 495, 1457
BspMI	ACCTGC	1 cut(s)	225
BspPI	GGATC	2 cut(s)	78, 194
BspTNI	GGTCTC	4 cut(s)	41, 603, 868, 1658
BsrDI	GCAATG	1 cut(s)	343
BsrFI	RCCGGY	3 cut(s)	100, 247, 556
BsrI	ACTGG	1 cut(s)	833
BssAI	RCCGGY	3 cut(s)	100, 247, 556
BssECI	CCNNGG	7 cut(s)	6, 89, 182, 499, 909, 1161, 1648
BssMI	GATC	4 cut(s)	70, 186, 922, 1710
BssNI	GRCGYC	2 cut(s)	119, 149
BssT1I	CCWWGG	3 cut(s)	499, 909, 1161
Bst2UI	CCWGG	3 cut(s)	361, 675, 957
Bst4CI	ACNGT	3 cut(s)	35, 645, 889
Bst6I	CTCTTC	2 cut(s)	871, 1752
BstACI	GRCGYC	2 cut(s)	119, 149
BstBAI	YACGTR	1 cut(s)	226
BstC8I	GCNNGC	2 cut(s)	249, 373
BstDEI	CTNAG	6 cut(s)	453, 600, 1050, 1662, 1687, 1791
BstEII	GGTNACC	1 cut(s)	322
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	6 cut(s)	204, 384, 919, 1375, 1440, 1852
BstH2I	RGCGCY	2 cut(s)	86, 254
BstHHI	GCGC	3 cut(s)	85, 137, 253
BstKTI	GATC	4 cut(s)	73, 189, 925, 1713
BstMAI	GTCTC	7 cut(s)	41, 156, 603, 868, 1321, 1550, 1658
BstMBI	GATC	4 cut(s)	70, 186, 922, 1710
BstMWI	GCNNNNNNNGC	8 cut(s)	91, 94, 226, 259, 354, 363, 372, 1033
BstNI	CCWGG	3 cut(s)	361, 675, 957
BstPAI	GACNNNNGTC	1 cut(s)	33
BstPI	GGTNACC	1 cut(s)	322
BstSCI	CCNGG	5 cut(s)	198, 326, 359, 673, 955
BstSLI	GKGCMC	1 cut(s)	231
BstV1I	GCAGC	2 cut(s)	1456, 1828
BstXI	CCANNNNNNTGG	3 cut(s)	391, 881, 971
Bsu15I	ATCGAT	1 cut(s)	1713
BsuRI	GGCC	3 cut(s)	5, 94, 1458
BsuTUI	ATCGAT	1 cut(s)	1713
BtsCI	GGATG	6 cut(s)	204, 384, 919, 1375, 1440, 1852
BtsIMutI	CAGTG	1 cut(s)	885
BveI	ACCTGC	1 cut(s)	225
Cac8I	GCNNGC	2 cut(s)	249, 373
CaiI	CAGNNNCTG	1 cut(s)	366
CfoI	GCGC	3 cut(s)	85, 137, 253
Cfr10I	RCCGGY	3 cut(s)	100, 247, 556
Cfr13I	GGNCC	3 cut(s)	178, 340, 1456
ClaI	ATCGAT	1 cut(s)	1713
CseI	GACGC	4 cut(s)	108, 337, 1223, 1343
Csp6I	GTAC	5 cut(s)	163, 685, 776, 837, 1724
CviAII	CATG	6 cut(s)	106, 301, 881, 1246, 1797, 1864
CviQI	GTAC	5 cut(s)	163, 685, 776, 837, 1724
DdeI	CTNAG	6 cut(s)	453, 600, 1050, 1662, 1687, 1791
DpnI	GATC	4 cut(s)	72, 188, 924, 1712
DpnII	GATC	4 cut(s)	70, 186, 922, 1710
DraI	TTTAAA	1 cut(s)	805
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	871, 1752
EarI	CTCTTC	2 cut(s)	871, 1752
EciI	GGCGGA	1 cut(s)	543
Ecl136II	GAGCTC	1 cut(s)	357
Eco130I	CCWWGG	3 cut(s)	499, 909, 1161
Eco24I	GRGCYC	1 cut(s)	359
Eco31I	GGTCTC	4 cut(s)	41, 603, 868, 1658
Eco32I	GATATC	2 cut(s)	174, 1377
Eco47I	GGWCC	2 cut(s)	178, 340
Eco53kI	GAGCTC	1 cut(s)	357
Eco57I	CTGAAG	1 cut(s)	1086
Eco72I	CACGTG	1 cut(s)	226
Eco88I	CYCGRG	2 cut(s)	181, 208
Eco91I	GGTNACC	1 cut(s)	322
EcoICRI	GAGCTC	1 cut(s)	357
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoO65I	GGTNACC	1 cut(s)	322
EcoRII	CCWGG	3 cut(s)	359, 673, 955
EcoRV	GATATC	2 cut(s)	174, 1377
EcoT14I	CCWWGG	3 cut(s)	499, 909, 1161
EcoT38I	GRGCYC	1 cut(s)	359
ErhI	CCWWGG	3 cut(s)	499, 909, 1161
Esp3I	CGTCTC	1 cut(s)	156
FaeI	CATG	6 cut(s)	109, 304, 884, 1249, 1800, 1867
FaqI	GGGAC	1 cut(s)	1221
FatI	CATG	6 cut(s)	105, 300, 880, 1245, 1796, 1863
FauI	CCCGC	1 cut(s)	252
FauNDI	CATATG	1 cut(s)	856
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	3 cut(s)	27, 192, 426
Fnu4HI	GCNGC	6 cut(s)	86, 95, 98, 221, 1470, 1817
FokI	GGATG	6 cut(s)	191, 371, 926, 1382, 1447, 1839
FriOI	GRGCYC	1 cut(s)	359
Fsp4HI	GCNGC	6 cut(s)	86, 95, 98, 221, 1470, 1817
FspBI	CTAG	4 cut(s)	413, 756, 834, 1272
GlaI	GCGC	3 cut(s)	84, 136, 252
GluI	GCNGC	6 cut(s)	86, 95, 98, 221, 1470, 1817
GsuI	CTGGAG	3 cut(s)	305, 343, 657
HaeII	RGCGCY	2 cut(s)	86, 254
HaeIII	GGCC	3 cut(s)	5, 94, 1458
HapII	CCGG	8 cut(s)	40, 101, 200, 248, 327, 376, 557, 656
HgaI	GACGC	4 cut(s)	108, 337, 1223, 1343
HhaI	GCGC	3 cut(s)	85, 137, 253
Hin1I	GRCGYC	2 cut(s)	119, 149
Hin1II	CATG	6 cut(s)	109, 304, 884, 1249, 1800, 1867
Hin6I	GCGC	3 cut(s)	83, 135, 251
HinP1I	GCGC	3 cut(s)	83, 135, 251
HincII	GTYRAC	4 cut(s)	28, 193, 427, 826
HindII	GTYRAC	4 cut(s)	28, 193, 427, 826
HinfI	GANTC	8 cut(s)	570, 1085, 1094, 1175, 1534, 1621, 1644, 1683
HpaII	CCGG	8 cut(s)	40, 101, 200, 248, 327, 376, 557, 656
HphI	GGTGA	3 cut(s)	316, 894, 1229
Hpy166II	GTNNAC	9 cut(s)	28, 163, 193, 229, 427, 648, 718, 826, 1280
Hpy188III	TCNNGA	8 cut(s)	46, 64, 145, 208, 352, 656, 1571, 1604
Hpy8I	GTNNAC	9 cut(s)	28, 163, 193, 229, 427, 648, 718, 826, 1280
Hpy99I	CGWCG	8 cut(s)	29, 32, 35, 124, 127, 130, 151, 194
HpyAV	CCTTC	8 cut(s)	61, 500, 763, 782, 915, 981, 1446, 1678
HpyCH4III	ACNGT	3 cut(s)	35, 645, 889
HpyCH4IV	ACGT	2 cut(s)	149, 225
HpyCH4V	TGCA	8 cut(s)	229, 1027, 1058, 1104, 1361, 1416, 1733, 1763
HpyF10VI	GCNNNNNNNGC	8 cut(s)	91, 94, 226, 259, 354, 363, 372, 1033
HpyF3I	CTNAG	6 cut(s)	453, 600, 1050, 1662, 1687, 1791
HpySE526I	ACGT	2 cut(s)	149, 225
Hsp92I	GRCGYC	2 cut(s)	119, 149
Hsp92II	CATG	6 cut(s)	109, 304, 884, 1249, 1800, 1867
HspAI	GCGC	3 cut(s)	83, 135, 251
Kpn2I	TCCGGA	1 cut(s)	655
KroI	GCCGGC	1 cut(s)	247
KroNI	GCCGGC	1 cut(s)	249
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	4 cut(s)	70, 186, 922, 1710
LmnI	GCTCC	2 cut(s)	362, 363
Lsp1109I	GCAGC	2 cut(s)	1456, 1828
LweI	GCATC	6 cut(s)	1206, 1248, 1360, 1425, 1456, 1720
MaeI	CTAG	4 cut(s)	413, 756, 834, 1272
MaeII	ACGT	2 cut(s)	149, 225
MaeIII	GTNAC	5 cut(s)	322, 900, 1300, 1656, 1779
MalI	GATC	4 cut(s)	72, 188, 924, 1712
MboI	GATC	4 cut(s)	70, 186, 922, 1710
MboII	GAAGA	7 cut(s)	858, 941, 944, 1055, 1103, 1331, 1739
MfeI	CAATTG	2 cut(s)	464, 1446
MhlI	GDGCHC	3 cut(s)	231, 359, 1848
MluCI	AATT	7 cut(s)	408, 464, 582, 707, 738, 794, 1446
MlyI	GAGTC	2 cut(s)	579, 1630
MmeI	TCCRAC	1 cut(s)	1290
MreI	CGCCGGCG	1 cut(s)	247
MroI	TCCGGA	1 cut(s)	655
MroNI	GCCGGC	1 cut(s)	247
MroXI	GAANNNNTTC	1 cut(s)	1405
MseI	TTAA	9 cut(s)	458, 525, 585, 804, 1116, 1242, 1628, 1677, 1870
MslI	CAYNNNNRTG	2 cut(s)	389, 482
MspA1I	CMGCKG	1 cut(s)	1691
MspI	CCGG	8 cut(s)	40, 101, 200, 248, 327, 376, 557, 656
MspR9I	CCNGG	5 cut(s)	200, 328, 361, 675, 957
MunI	CAATTG	2 cut(s)	464, 1446
Mva1269I	GAATGC	1 cut(s)	1060
MvaI	CCWGG	3 cut(s)	361, 675, 957
MwoI	GCNNNNNNNGC	8 cut(s)	91, 94, 226, 259, 354, 363, 372, 1033
NaeI	GCCGGC	1 cut(s)	249
NciI	CCSGG	2 cut(s)	200, 328
NdeI	CATATG	1 cut(s)	856
NdeII	GATC	4 cut(s)	70, 186, 922, 1710
NgoMIV	GCCGGC	1 cut(s)	247
NlaIII	CATG	6 cut(s)	109, 304, 884, 1249, 1800, 1867
NlaIV	GGNNCC	4 cut(s)	180, 341, 495, 1457
NmeAIII	GCCGAG	2 cut(s)	31, 114
NmuCI	GTSAC	2 cut(s)	322, 900
PaqCI	CACCTGC	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	2 cut(s)	122, 237
PctI	GAATGC	1 cut(s)	1060
PdiI	GCCGGC	1 cut(s)	249
PdmI	GAANNNNTTC	1 cut(s)	1405
PfeI	GAWTC	6 cut(s)	1085, 1094, 1175, 1534, 1644, 1683
PflMI	CCANNNNNTGG	1 cut(s)	1188
PfoI	TCCNGGA	3 cut(s)	359, 673, 955
PkrI	GCNGC	6 cut(s)	87, 96, 99, 222, 1471, 1818
PleI	GAGTC	2 cut(s)	578, 1629
PmaCI	CACGTG	1 cut(s)	226
PmlI	CACGTG	1 cut(s)	226
PpsI	GAGTC	2 cut(s)	578, 1629
Ppu21I	YACGTR	1 cut(s)	226
PshAI	GACNNNNGTC	1 cut(s)	33
Psp124BI	GAGCTC	1 cut(s)	359
Psp6I	CCWGG	3 cut(s)	359, 673, 955
PspCI	CACGTG	1 cut(s)	226
PspEI	GGTNACC	1 cut(s)	322
PspGI	CCWGG	3 cut(s)	359, 673, 955
PspN4I	GGNNCC	4 cut(s)	180, 341, 495, 1457
PspPI	GGNCC	3 cut(s)	178, 340, 1456
PstNI	CAGNNNCTG	1 cut(s)	366
PvuII	CAGCTG	1 cut(s)	1691
RsaI	GTAC	5 cut(s)	164, 686, 777, 838, 1725
RsaNI	GTAC	5 cut(s)	163, 685, 776, 837, 1724
RseI	CAYNNNNRTG	2 cut(s)	389, 482
SacI	GAGCTC	1 cut(s)	359
SalI	GTCGAC	3 cut(s)	26, 191, 425
SaqAI	TTAA	9 cut(s)	458, 525, 585, 804, 1116, 1242, 1628, 1677, 1870
SatI	GCNGC	6 cut(s)	86, 95, 98, 221, 1470, 1817
Sau3AI	GATC	4 cut(s)	70, 186, 922, 1710
Sau96I	GGNCC	3 cut(s)	178, 340, 1456
SchI	GAGTC	2 cut(s)	579, 1630
ScrFI	CCNGG	5 cut(s)	200, 328, 361, 675, 957
SduI	GDGCHC	3 cut(s)	231, 359, 1848
SfaNI	GCATC	6 cut(s)	1206, 1248, 1360, 1425, 1456, 1720
SgrAI	CRCCGGYG	1 cut(s)	247
SgrDI	CGTCGACG	1 cut(s)	26
SinI	GGWCC	2 cut(s)	178, 340
SmiMI	CAYNNNNRTG	2 cut(s)	389, 482
SmlI	CTYRAG	2 cut(s)	1553, 1820
SmoI	CTYRAG	2 cut(s)	1553, 1820
SpeI	ACTAGT	1 cut(s)	755
Sse9I	AATT	7 cut(s)	408, 464, 582, 707, 738, 794, 1446
SspI	AATATT	2 cut(s)	1228, 1705
SspMI	CTAG	4 cut(s)	413, 756, 834, 1272
SstI	GAGCTC	1 cut(s)	359
StyD4I	CCNGG	5 cut(s)	198, 326, 359, 673, 955
StyI	CCWWGG	3 cut(s)	499, 909, 1161
TaaI	ACNGT	3 cut(s)	35, 645, 889
TaiI	ACGT	2 cut(s)	152, 228
TasI	AATT	7 cut(s)	408, 464, 582, 707, 738, 794, 1446
TatI	WGTACW	2 cut(s)	775, 1723
TauI	GCSGC	4 cut(s)	88, 97, 100, 223
TfiI	GAWTC	6 cut(s)	1085, 1094, 1175, 1534, 1644, 1683
Tru1I	TTAA	9 cut(s)	458, 525, 585, 804, 1116, 1242, 1628, 1677, 1870
Tru9I	TTAA	9 cut(s)	458, 525, 585, 804, 1116, 1242, 1628, 1677, 1870
TscAI	CASTG	1 cut(s)	892
TseFI	GTSAC	2 cut(s)	322, 900
TseI	GCWGC	2 cut(s)	1469, 1816
Tsp45I	GTSAC	2 cut(s)	322, 900
TspDTI	ATGAA	6 cut(s)	284, 289, 1086, 1125, 1356, 1515
TspGWI	ACGGA	1 cut(s)	494
TspRI	CASTG	1 cut(s)	892
Van91I	CCANNNNNTGG	1 cut(s)	1188
VneI	GTGCAC	1 cut(s)	227
VpaK11BI	GGWCC	2 cut(s)	178, 340
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	1 cut(s)	738
XmiI	GTMKAC	3 cut(s)	27, 192, 426
XmnI	GAANNNNTTC	1 cut(s)	1405
XspI	CTAG	4 cut(s)	413, 756, 834, 1272
ZraI	GACGTC	1 cut(s)	150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.