Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000183.1

Orthogroup ID

OG0010352

Physical Location & Seq

Genomic Coordinates Forward (+)

215293 .. 224863

Gene Structure 9571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000183.1_g000044.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3099 bp

atggccgaggagttctccaaagccgtcgacgacggtctccggctctcgaaaagactatacttcgggaaggatcgagccgtggcgccgccgaggccgccgcctgccatggacaagtcggcgtcgtcggcgggttgcgcctacctcccgacgtctccgatggtgtacgccgtgatatcggacccgaggatcgtcgacaacccggacatcccgagctaccagccgcacgtgcacggcaggtgcgacccgccggcgctcattccgcttccgatgaacagggttgagctggaggtcgattgcttcatggacaccgcctttattcgggtcaccgggtcgtggagggtccattgcgtcaagagctccaggagctgtggctgccggattgccatccctatgggcgaacagggttcaattctaggtgttgaggtcgacatttctggtaaatcattctatactcagttaagtcaattgaaagatgacacggatatgagcaaggttccccaaggagaaggaggcttcctcaatgttaaacctcatatattcacattgacaactccgccggttgatgggggagtcaatctcacaattaaaatgagttggtctcagaagttattgtatcgaaatggagagttctctttagacataccgttcacatttccggagtttgtcattcctcccggaaagaagtacctgaaaaaggaaaagattgaattgaatgtgaactctggtctgggaactgaaattttattcaagggaactagtcatcttttgaaggaagtaaagagccaagaaggaaaattggggtttaaatacgagggaaatgttgtcaactggtctagtaccgacttccacttctcatatgcagtctcttcaagccaaatacatggcactgttatcacacagtcaccttccaaggatgatgttgatcaaagagagattttctctgcctatcttcttcctggaaaccagcgaagtggaaagggtttcagaaggaatgtagtcgttgttgttgatataagtggaagtatgcagggaaagccacttgaagatactcagaatgcactatctgaagccctctctaaacttgattcagaagattcattctgcattatagcttttaatggacagacttatgtttcatctacatcattgaaatcggctaccaaggaggcagttgaatcggccattgagtggattggcatcaactttattgctggtggtgatacaaatattatgcggccccttaacatggcaatagagatgctatccaactctaggggttcacttcctatcatatttctggttactgatggggcagttgaagatgagagacaaatatgcgatggaataaaaaagcgtcttgcaagtgaggatgcgatatcccctcgtatatacacttttggaataggttcattctgcaaccattatttcctgcggatgctatcaacaattggaaggggccaatatgatgctgcctatgatatagatttggttcagcctcgaatacagaacttatttgcgagagcttcatctgtgattcttacaaatataacccttgagacattggacgatcttgatgatgttgaggtgctcccttgccatattccagacctctcatttgagagtccattaagtgtatctggcagattccaaggcaagttacctgagaccttcaaggttaaaggattctcagctgatatgtcgaatattgtgatcgatttgaaagtacaagttgcaaaggacatacctcttcacagggtatatgcaaaaggagagattgagttactgactgctcaggcatggctgtcagagaacaagcagcttgaggataaggtagctaagttgagtgtacataccggtgctttgagcgagtatacacgcatggtcatatttgaaaaagaagtagctttgcaacagatggcctcaaagaaaagccagaacaaggaggatactgaaaccttgaaaatgatattgccacatagtttgtgcgtcggctttggaaacgtggccgcaacttcggacaacattcctccaggagccgaagaaccaaagcttccggaagcagttgaaattttcgccaaagccgcttcaggctgttgtggtctcattagtcaggtcgtcggattcgggattccgatgaacggtcgccagatttcggtcaccggtcaccggaatctgcagccggccactggtcacccgagtccgatattagagcttgcattattcatgaatggctattacgcaggaggtgagagaagagtagtagaattacttgaaaatcaatctggaaagatcctaaacaaagcattggtagaaggggaagatgagaattgcaggaaaccacactggtctcttcgcaacttcttcaggcgaccaactattattgggaaaaatttgctcactatagtgaaattcggtcttgtacaatatatgattctgaagacagtttgtgcattcctagcactcgtgttggaaatctttggcgtctatggtgatggggaattcaagtttcactacgggtatccatacatcacgatagtactgaatttcagccagatgtgggcattgtattgccttgtgcaattctataatgtgactcatgaaagacttcaaccaataaggccgcttgcaaagttcatcagctttaaggctattgtgtttgcgacttggtggcaaggtatggcaattgcagctgttgcacatgtgtttgtcttttcggcagaaccttaccattacattccatcttcttctgggtatgagaaaatcaccaccactgaaacaaccagtgaggaagcagtgaagttggaggaaggtgacagtagtacacaagctgtggttgaaacaaaagaaactcaggtcgaggctcccggaacaagtgtgactgagagtgttcaggacatagtgtttgaaggtggtcatcatgttgtcaaggatgttgtgttgaccataaatcaagcaatagggcctgtggagaagggtgtgacaaagacacaagaagccttccaccaaagatcggatgagcatgacgataagtcgaaggtttcagttgaggagagtattgaagtgactctttccgatgaagaaacacatttggaccgttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA_3

Protein Analysis

1032

Amino Acids

114.05

Weight (kDa)

5.57

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19110
fragaria_vesca	FvH4_1g08960 FvH4_1g08960 FvH4_1g08960 FvH4_1g08960
malus_domestica	MD02G1095100.v1.1 MD15G1219900.v1.1
prunus_persica	Prupe.7G196100_v2.0.a1 Prupe.7G196100_v2.0.a1
pyrus_communis	pycom02g07510 pycom15g19500
rosa_chinensis	RchiOBHm_Chr2g0095411
rosa_laevigata	RLG00000016563
rosa_multiflora	Rmu_ssc0000183.1_g000044
rosa_roxburghii	Rroxscaffold_2G00146390
rosa_rugosa	Rorug02G0050700
rosa_samantha	Rh2AG098800 Rh2BG100000 Rh2CG102000 Rh2DG099600
rosa_wichuraiana	Rw2G007460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	225
AatII	GACGTC	1 cut(s)	152
Acc36I	ACCTGC	1 cut(s)	225
AccB1I	GGYRCC	1 cut(s)	82
AccB7I	CCANNNNNTGG	1 cut(s)	1188
AccI	GTMKAC	4 cut(s)	27, 192, 426, 1871
AccIII	TCCGGA	2 cut(s)	655, 2053
AclWI	GGATC	3 cut(s)	78, 194, 2284
AcoI	YGGCCR	4 cut(s)	3, 1179, 2004, 2181
AcsI	RAATTY	6 cut(s)	738, 2067, 2389, 2408, 2498, 2542
AcuI	CTGAAG	4 cut(s)	1086, 2070, 2347, 2456
AcvI	CACGTG	1 cut(s)	226
AcyI	GRCGYC	4 cut(s)	83, 119, 149, 2481
AfaI	GTAC	8 cut(s)	164, 686, 838, 1725, 1848, 2421, 2538, 2821
AflIII	ACRYGT	1 cut(s)	2698
AgeI	ACCGGT	2 cut(s)	1853, 2159
AhdI	GACNNNNNGTC	1 cut(s)	3028
AhlI	ACTAGT	1 cut(s)	755
AjnI	CCWGG	3 cut(s)	359, 955, 2029
AleI	CACNNNNGTG	1 cut(s)	2402
Alw21I	GWGCWC	3 cut(s)	231, 359, 1590
Alw26I	GTCTC	9 cut(s)	41, 156, 603, 868, 1321, 1550, 1658, 2105, 2352
Alw44I	GTGCAC	1 cut(s)	227
AlwI	GGATC	3 cut(s)	78, 194, 2284
AlwNI	CAGNNNCTG	1 cut(s)	366
Ama87I	CYCGRG	3 cut(s)	181, 208, 2194
Aor13HI	TCCGGA	2 cut(s)	655, 2053
ApaLI	GTGCAC	1 cut(s)	227
ApeKI	GCWGC	5 cut(s)	372, 1469, 1816, 2176, 2687
ApoI	RAATTY	6 cut(s)	738, 2067, 2389, 2408, 2498, 2542
ArsI	GACNNNNNNTTYG	4 cut(s)	1598, 1630, 2885, 2917
AsiGI	ACCGGT	2 cut(s)	1853, 2159
Asp700I	GAANNNNTTC	2 cut(s)	1405, 2604
AspLEI	GCGC	3 cut(s)	85, 137, 253
AspS9I	GGNCC	6 cut(s)	178, 340, 1236, 1456, 2960, 3091
AsuC2I	CCSGG	4 cut(s)	200, 328, 675, 2865
AvaI	CYCGRG	3 cut(s)	181, 208, 2194
AvaII	GGWCC	3 cut(s)	178, 340, 3091
BaeGI	GKGCMC	1 cut(s)	231
BanI	GGYRCC	1 cut(s)	82
BanII	GRGCYC	1 cut(s)	359
BauI	CACGAG	1 cut(s)	2462
BbrPI	CACGTG	1 cut(s)	226
BbsI	GAAGAC	1 cut(s)	2444
Bbv12I	GWGCWC	3 cut(s)	231, 359, 1590
BbvI	GCAGC	5 cut(s)	359, 1456, 1828, 2188, 2699
BccI	CCATC	8 cut(s)	151, 392, 557, 1301, 1334, 1909, 2486, 2746
BceAI	ACGGC	4 cut(s)	8, 62, 152, 247
BcgI	CGANNNNNNTGC	2 cut(s)	1158, 1192
BciT130I	CCWGG	3 cut(s)	361, 957, 2031
BciVI	GTATCC	2 cut(s)	1939, 2529
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	4 cut(s)	200, 328, 675, 2865
BcoDI	GTCTC	9 cut(s)	41, 156, 603, 868, 1321, 1550, 1658, 2105, 2352
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	5 cut(s)	413, 756, 834, 1272, 2456
BfmI	CTRYAG	2 cut(s)	2174, 2400
BfoI	RGCGCY	2 cut(s)	86, 254
BfuAI	ACCTGC	1 cut(s)	225
BfuI	GTATCC	2 cut(s)	1939, 2529
BglI	GCCNNNNNGGC	1 cut(s)	91
BmcAI	AGTACT	1 cut(s)	2538
Bme1390I	CCNGG	7 cut(s)	200, 328, 361, 675, 957, 2031, 2865
Bme18I	GGWCC	3 cut(s)	178, 340, 3091
BmeRI	GACNNNNNGTC	1 cut(s)	3028
BmeT110I	CYCGRG	3 cut(s)	181, 208, 2194
BmgT120I	GGNCC	6 cut(s)	178, 340, 1236, 1456, 2960, 3091
BmiI	GGNNCC	8 cut(s)	84, 180, 341, 495, 1238, 1457, 2035, 2862
BmrFI	CCNGG	7 cut(s)	200, 328, 361, 675, 957, 2031, 2865
BmsI	GCATC	5 cut(s)	1206, 1248, 1360, 1425, 1456
BoxI	GACNNNNGTC	1 cut(s)	33
BpiI	GAAGAC	1 cut(s)	2444
BplI	GAGNNNNNCTC	9 cut(s)	31, 501, 533, 561, 593, 583, 615, 923, 955
BpmI	CTGGAG	3 cut(s)	305, 343, 2013
Bpu10I	CCTNAGC	1 cut(s)	1791
BpuEI	CTTGAG	2 cut(s)	1574, 1841
BpuMI	CCSGG	4 cut(s)	200, 328, 675, 2865
Bsa29I	ATCGAT	1 cut(s)	1713
BsaAI	YACGTR	1 cut(s)	226
BsaBI	GATNNNNATC	3 cut(s)	383, 921, 1196
BsaHI	GRCGYC	4 cut(s)	83, 119, 149, 2481
BsaI	GGTCTC	5 cut(s)	41, 603, 1658, 2105, 2352
BsaJI	CCNNGG	9 cut(s)	6, 78, 89, 105, 182, 499, 909, 1161, 1648
BsaWI	WCCGGW	5 cut(s)	655, 1853, 2053, 2159, 2166
Bse118I	RCCGGY	5 cut(s)	247, 556, 1853, 2159, 2179
Bse1I	ACTGG	4 cut(s)	833, 2191, 2348, 2781
Bse3DI	GCAATG	1 cut(s)	343
Bse8I	GATNNNNATC	3 cut(s)	383, 921, 1196
BseAI	TCCGGA	2 cut(s)	655, 2053
BseBI	CCWGG	3 cut(s)	361, 957, 2031
BseCI	ATCGAT	1 cut(s)	1713
BseDI	CCNNGG	9 cut(s)	6, 78, 89, 105, 182, 499, 909, 1161, 1648
BseGI	GGATG	7 cut(s)	204, 384, 919, 1375, 1440, 2935, 3019
BseJI	GATNNNNATC	3 cut(s)	383, 921, 1196
BseMI	GCAATG	1 cut(s)	343
BseMII	CTCAG	8 cut(s)	467, 614, 1064, 1653, 1701, 1805, 2864, 2871
BseNI	ACTGG	4 cut(s)	833, 2191, 2348, 2781
BseRI	GAGGAG	2 cut(s)	23, 3062
BseSI	GKGCMC	1 cut(s)	231
BseXI	GCAGC	5 cut(s)	359, 1456, 1828, 2188, 2699
Bsh1285I	CGRYCG	1 cut(s)	2143
BshNI	GGYRCC	1 cut(s)	82
BshTI	ACCGGT	2 cut(s)	1853, 2159
BshVI	ATCGAT	1 cut(s)	1713
BsiEI	CGRYCG	1 cut(s)	2143
BsiHKAI	GWGCWC	3 cut(s)	231, 359, 1590
BsiHKCI	CYCGRG	3 cut(s)	181, 208, 2194
BsmAI	GTCTC	9 cut(s)	41, 156, 603, 868, 1321, 1550, 1658, 2105, 2352
BsmBI	CGTCTC	1 cut(s)	156
BsmI	GAATGC	2 cut(s)	1060, 2450
Bso31I	GGTCTC	5 cut(s)	41, 603, 1658, 2105, 2352
BsoBI	CYCGRG	3 cut(s)	181, 208, 2194
Bsp1286I	GDGCHC	3 cut(s)	231, 359, 1590
Bsp13I	TCCGGA	2 cut(s)	655, 2053
Bsp1407I	TGTACA	2 cut(s)	1846, 2419
Bsp143I	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
Bsp19I	CCATGG	1 cut(s)	105
BspCNI	CTCAG	8 cut(s)	466, 613, 1063, 1654, 1700, 1804, 2863, 2872
BspDI	ATCGAT	1 cut(s)	1713
BspEI	TCCGGA	2 cut(s)	655, 2053
BspHI	TCATGA	2 cut(s)	2223, 2596
BspLI	GGNNCC	8 cut(s)	84, 180, 341, 495, 1238, 1457, 2035, 2862
BspMAI	CTGCAG	1 cut(s)	2178
BspMI	ACCTGC	1 cut(s)	225
BspPI	GGATC	3 cut(s)	78, 194, 2284
BspT107I	GGYRCC	1 cut(s)	82
BspTNI	GGTCTC	5 cut(s)	41, 603, 1658, 2105, 2352
BsrDI	GCAATG	1 cut(s)	343
BsrFI	RCCGGY	5 cut(s)	247, 556, 1853, 2159, 2179
BsrGI	TGTACA	2 cut(s)	1846, 2419
BsrI	ACTGG	4 cut(s)	833, 2191, 2348, 2781
BssAI	RCCGGY	5 cut(s)	247, 556, 1853, 2159, 2179
BssECI	CCNNGG	9 cut(s)	6, 78, 89, 105, 182, 499, 909, 1161, 1648
BssMI	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
BssNAI	GTATAC	1 cut(s)	1872
BssNI	GRCGYC	4 cut(s)	83, 119, 149, 2481
BssSI	CACGAG	1 cut(s)	2462
BssT1I	CCWWGG	5 cut(s)	105, 499, 909, 1161, 1648
Bst1107I	GTATAC	1 cut(s)	1872
Bst2BI	CACGAG	1 cut(s)	2462
Bst2UI	CCWGG	3 cut(s)	361, 957, 2031
Bst4CI	ACNGT	8 cut(s)	35, 645, 889, 900, 2141, 2443, 2816, 3095
Bst6I	CTCTTC	4 cut(s)	871, 1752, 2248, 2355
BstACI	GRCGYC	4 cut(s)	83, 119, 149, 2481
BstAPI	GCANNNNNTGC	1 cut(s)	2693
BstAUI	TGTACA	2 cut(s)	1846, 2419
BstBAI	YACGTR	1 cut(s)	226
BstC8I	GCNNGC	5 cut(s)	102, 249, 2181, 2214, 2625
BstDEI	CTNAG	9 cut(s)	453, 600, 1050, 1662, 1687, 1791, 1836, 2850, 2880
BstDSI	CCRYGG	2 cut(s)	78, 105
BstEII	GGTNACC	4 cut(s)	322, 2155, 2162, 2189
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	7 cut(s)	204, 384, 919, 1375, 1440, 2935, 3019
BstH2I	RGCGCY	2 cut(s)	86, 254
BstHHI	GCGC	3 cut(s)	85, 137, 253
BstKTI	GATC	7 cut(s)	73, 189, 925, 1570, 1713, 2292, 3011
BstMAI	GTCTC	9 cut(s)	41, 156, 603, 868, 1321, 1550, 1658, 2105, 2352
BstMBI	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
BstMCI	CGRYCG	1 cut(s)	2143
BstNI	CCWGG	3 cut(s)	361, 957, 2031
BstNSI	RCATGY	1 cut(s)	2702
BstPAI	GACNNNNGTC	1 cut(s)	33
BstPI	GGTNACC	4 cut(s)	322, 2155, 2162, 2189
BstSCI	CCNGG	7 cut(s)	198, 326, 359, 673, 955, 2029, 2863
BstSFI	CTRYAG	2 cut(s)	2174, 2400
BstSLI	GKGCMC	1 cut(s)	231
BstV1I	GCAGC	5 cut(s)	359, 1456, 1828, 2188, 2699
BstV2I	GAAGAC	1 cut(s)	2444
BstX2I	RGATCY	1 cut(s)	2289
BstXI	CCANNNNNNTGG	3 cut(s)	391, 881, 971
BstYI	RGATCY	1 cut(s)	2289
BstZ17I	GTATAC	1 cut(s)	1872
Bsu15I	ATCGAT	1 cut(s)	1713
BsuI	GTATCC	2 cut(s)	1939, 2529
BsuTUI	ATCGAT	1 cut(s)	1713
BtgI	CCRYGG	2 cut(s)	78, 105
BtgZI	GCGATG	1 cut(s)	1353
BtsCI	GGATG	7 cut(s)	204, 384, 919, 1375, 1440, 2935, 3019
BtsI	GCAGTG	1 cut(s)	2799
BtsIMutI	CAGTG	6 cut(s)	885, 2184, 2341, 2769, 2788, 2799
BveI	ACCTGC	1 cut(s)	225
Cac8I	GCNNGC	5 cut(s)	102, 249, 2181, 2214, 2625
CaiI	CAGNNNCTG	1 cut(s)	366
CciI	TCATGA	2 cut(s)	2223, 2596
CfoI	GCGC	3 cut(s)	85, 137, 253
Cfr10I	RCCGGY	5 cut(s)	247, 556, 1853, 2159, 2179
Cfr13I	GGNCC	6 cut(s)	178, 340, 1236, 1456, 2960, 3091
ClaI	ATCGAT	1 cut(s)	1713
CseI	GACGC	5 cut(s)	108, 337, 1343, 1975, 2470
Csp6I	GTAC	8 cut(s)	163, 685, 837, 1724, 1847, 2420, 2537, 2820
CspAI	ACCGGT	2 cut(s)	1853, 2159
CspCI	CAANNNNNGTGG	2 cut(s)	1962, 1997
CviQI	GTAC	8 cut(s)	163, 685, 837, 1724, 1847, 2420, 2537, 2820
DdeI	CTNAG	9 cut(s)	453, 600, 1050, 1662, 1687, 1791, 1836, 2850, 2880
DinI	GGCGCC	1 cut(s)	84
DpnI	GATC	7 cut(s)	72, 188, 924, 1569, 1712, 2291, 3010
DpnII	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
DraI	TTTAAA	1 cut(s)	805
DriI	GACNNNNNGTC	1 cut(s)	3028
EaeI	YGGCCR	4 cut(s)	3, 1179, 2004, 2181
Eam1104I	CTCTTC	4 cut(s)	871, 1752, 2248, 2355
Eam1105I	GACNNNNNGTC	1 cut(s)	3028
EarI	CTCTTC	4 cut(s)	871, 1752, 2248, 2355
EciI	GGCGGA	1 cut(s)	543
Ecl136II	GAGCTC	1 cut(s)	357
Eco130I	CCWWGG	5 cut(s)	105, 499, 909, 1161, 1648
Eco24I	GRGCYC	1 cut(s)	359
Eco31I	GGTCTC	5 cut(s)	41, 603, 1658, 2105, 2352
Eco32I	GATATC	2 cut(s)	174, 1377
Eco47I	GGWCC	3 cut(s)	178, 340, 3091
Eco53kI	GAGCTC	1 cut(s)	357
Eco57I	CTGAAG	4 cut(s)	1086, 2070, 2347, 2456
Eco72I	CACGTG	1 cut(s)	226
Eco88I	CYCGRG	3 cut(s)	181, 208, 2194
Eco91I	GGTNACC	4 cut(s)	322, 2155, 2162, 2189
EcoICRI	GAGCTC	1 cut(s)	357
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoO109I	RGGNCCY	1 cut(s)	2960
EcoO65I	GGTNACC	4 cut(s)	322, 2155, 2162, 2189
EcoRI	GAATTC	1 cut(s)	2498
EcoRII	CCWGG	3 cut(s)	359, 955, 2029
EcoRV	GATATC	2 cut(s)	174, 1377
EcoT14I	CCWWGG	5 cut(s)	105, 499, 909, 1161, 1648
EcoT38I	GRGCYC	1 cut(s)	359
EgeI	GGCGCC	1 cut(s)	84
EheI	GGCGCC	1 cut(s)	84
ErhI	CCWWGG	5 cut(s)	105, 499, 909, 1161, 1648
Esp3I	CGTCTC	1 cut(s)	156
FalI	AAGNNNNNCTT	2 cut(s)	3051, 3083
FauI	CCCGC	2 cut(s)	121, 252
FauNDI	CATATG	1 cut(s)	856
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	4 cut(s)	27, 192, 426, 1871
FokI	GGATG	7 cut(s)	191, 371, 926, 1382, 1447, 2942, 3026
FriOI	GRGCYC	1 cut(s)	359
FspBI	CTAG	5 cut(s)	413, 756, 834, 1272, 2456
GlaI	GCGC	3 cut(s)	84, 136, 252
GsuI	CTGGAG	3 cut(s)	305, 343, 2013
HaeII	RGCGCY	2 cut(s)	86, 254
HgaI	GACGC	5 cut(s)	108, 337, 1343, 1975, 2470
HhaI	GCGC	3 cut(s)	85, 137, 253
Hin1I	GRCGYC	4 cut(s)	83, 119, 149, 2481
Hin6I	GCGC	3 cut(s)	83, 135, 251
HinP1I	GCGC	3 cut(s)	83, 135, 251
HincII	GTYRAC	5 cut(s)	28, 193, 427, 826, 2940
HindII	GTYRAC	5 cut(s)	28, 193, 427, 826, 2940
HindIII	AAGCTT	1 cut(s)	2048
Hpy99I	CGWCG	9 cut(s)	29, 32, 35, 124, 127, 151, 194, 1991, 2120
HpyCH4III	ACNGT	8 cut(s)	35, 645, 889, 900, 2141, 2443, 2816, 3095
HpyCH4IV	ACGT	3 cut(s)	149, 225, 2001
HpyF3I	CTNAG	9 cut(s)	453, 600, 1050, 1662, 1687, 1791, 1836, 2850, 2880
HpySE526I	ACGT	3 cut(s)	149, 225, 2001
Hsp92I	GRCGYC	4 cut(s)	83, 119, 149, 2481
HspAI	GCGC	3 cut(s)	83, 135, 251
KasI	GGCGCC	1 cut(s)	82
Kpn2I	TCCGGA	2 cut(s)	655, 2053
KroI	GCCGGC	2 cut(s)	247, 2179
KroNI	GCCGGC	2 cut(s)	249, 2181
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
LmnI	GCTCC	5 cut(s)	362, 363, 1593, 2033, 2866
Lsp1109I	GCAGC	5 cut(s)	359, 1456, 1828, 2188, 2699
LweI	GCATC	5 cut(s)	1206, 1248, 1360, 1425, 1456
MaeI	CTAG	5 cut(s)	413, 756, 834, 1272, 2456
MaeII	ACGT	3 cut(s)	149, 225, 2001
MalI	GATC	7 cut(s)	72, 188, 924, 1569, 1712, 2291, 3010
MboI	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
MfeI	CAATTG	3 cut(s)	464, 1446, 2682
MflI	RGATCY	1 cut(s)	2289
MhlI	GDGCHC	3 cut(s)	231, 359, 1590
Mly113I	GGCGCC	1 cut(s)	83
MlyI	GAGTC	5 cut(s)	579, 1630, 2206, 2587, 3058
MmeI	TCCRAC	4 cut(s)	1290, 2098, 2448, 2781
MreI	CGCCGGCG	1 cut(s)	247
MroI	TCCGGA	2 cut(s)	655, 2053
MroNI	GCCGGC	2 cut(s)	247, 2179
MroXI	GAANNNNTTC	2 cut(s)	1405, 2604
MslI	CAYNNNNRTG	4 cut(s)	389, 482, 1854, 2402
MspA1I	CMGCKG	2 cut(s)	1691, 2690
MspR9I	CCNGG	7 cut(s)	200, 328, 361, 675, 957, 2031, 2865
MunI	CAATTG	3 cut(s)	464, 1446, 2682
Mva1269I	GAATGC	2 cut(s)	1060, 2450
MvaI	CCWGG	3 cut(s)	361, 957, 2031
NaeI	GCCGGC	2 cut(s)	249, 2181
NarI	GGCGCC	1 cut(s)	83
NciI	CCSGG	4 cut(s)	200, 328, 675, 2865
NcoI	CCATGG	1 cut(s)	105
NdeI	CATATG	1 cut(s)	856
NdeII	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
NgoMIV	GCCGGC	2 cut(s)	247, 2179
NlaIV	GGNNCC	8 cut(s)	84, 180, 341, 495, 1238, 1457, 2035, 2862
NmeAIII	GCCGAG	2 cut(s)	31, 114
NspI	RCATGY	1 cut(s)	2702
OliI	CACNNNNGTG	1 cut(s)	2402
PagI	TCATGA	2 cut(s)	2223, 2596
PaqCI	CACCTGC	1 cut(s)	225
PciI	ACATGT	1 cut(s)	2698
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PctI	GAATGC	2 cut(s)	1060, 2450
PdiI	GCCGGC	2 cut(s)	249, 2181
PdmI	GAANNNNTTC	2 cut(s)	1405, 2604
PflMI	CCANNNNNTGG	1 cut(s)	1188
PfoI	TCCNGGA	5 cut(s)	359, 673, 955, 2029, 2863
PinAI	ACCGGT	2 cut(s)	1853, 2159
PleI	GAGTC	5 cut(s)	578, 1629, 2205, 2587, 3058
PluTI	GGCGCC	1 cut(s)	86
PmaCI	CACGTG	1 cut(s)	226
PmlI	CACGTG	1 cut(s)	226
PpsI	GAGTC	5 cut(s)	578, 1629, 2205, 2587, 3058
Ppu21I	YACGTR	1 cut(s)	226
PscI	ACATGT	1 cut(s)	2698
PshAI	GACNNNNGTC	1 cut(s)	33
Psp124BI	GAGCTC	1 cut(s)	359
Psp6I	CCWGG	3 cut(s)	359, 955, 2029
PspCI	CACGTG	1 cut(s)	226
PspEI	GGTNACC	4 cut(s)	322, 2155, 2162, 2189
PspGI	CCWGG	3 cut(s)	359, 955, 2029
PspN4I	GGNNCC	8 cut(s)	84, 180, 341, 495, 1238, 1457, 2035, 2862
PspPI	GGNCC	6 cut(s)	178, 340, 1236, 1456, 2960, 3091
PstI	CTGCAG	1 cut(s)	2178
PstNI	CAGNNNCTG	1 cut(s)	366
PsuI	RGATCY	1 cut(s)	2289
PvuII	CAGCTG	2 cut(s)	1691, 2690
RsaI	GTAC	8 cut(s)	164, 686, 838, 1725, 1848, 2421, 2538, 2821
RsaNI	GTAC	8 cut(s)	163, 685, 837, 1724, 1847, 2420, 2537, 2820
RseI	CAYNNNNRTG	4 cut(s)	389, 482, 1854, 2402
SacI	GAGCTC	1 cut(s)	359
SalI	GTCGAC	3 cut(s)	26, 191, 425
Sau3AI	GATC	7 cut(s)	70, 186, 922, 1567, 1710, 2289, 3008
Sau96I	GGNCC	6 cut(s)	178, 340, 1236, 1456, 2960, 3091
ScaI	AGTACT	1 cut(s)	2538
SchI	GAGTC	5 cut(s)	579, 1630, 2206, 2587, 3058
ScrFI	CCNGG	7 cut(s)	200, 328, 361, 675, 957, 2031, 2865
SduI	GDGCHC	3 cut(s)	231, 359, 1590
SfaNI	GCATC	5 cut(s)	1206, 1248, 1360, 1425, 1456
SfcI	CTRYAG	2 cut(s)	2174, 2400
SfoI	GGCGCC	1 cut(s)	84
SgrAI	CRCCGGYG	1 cut(s)	247
SgrDI	CGTCGACG	1 cut(s)	26
SinI	GGWCC	3 cut(s)	178, 340, 3091
SmiMI	CAYNNNNRTG	4 cut(s)	389, 482, 1854, 2402
SmlI	CTYRAG	2 cut(s)	1553, 1820
SmoI	CTYRAG	2 cut(s)	1553, 1820
SpeI	ACTAGT	1 cut(s)	755
SspDI	GGCGCC	1 cut(s)	82
SspI	AATATT	2 cut(s)	1228, 1705
SspMI	CTAG	5 cut(s)	413, 756, 834, 1272, 2456
SstI	GAGCTC	1 cut(s)	359
StyD4I	CCNGG	7 cut(s)	198, 326, 359, 673, 955, 2029, 2863
StyI	CCWWGG	5 cut(s)	105, 499, 909, 1161, 1648
TaaI	ACNGT	8 cut(s)	35, 645, 889, 900, 2141, 2443, 2816, 3095
TaiI	ACGT	3 cut(s)	152, 228, 2004
TaqII	GACCGA	2 cut(s)	2143, 2402
TatI	WGTACW	5 cut(s)	1723, 1846, 2419, 2536, 2819
TauI	GCSGC	8 cut(s)	88, 97, 100, 223, 1237, 2009, 2084, 2623
TscAI	CASTG	6 cut(s)	892, 2191, 2348, 2776, 2788, 2799
TseI	GCWGC	5 cut(s)	372, 1469, 1816, 2176, 2687
TspGWI	ACGGA	1 cut(s)	494
TspRI	CASTG	6 cut(s)	892, 2191, 2348, 2776, 2788, 2799
Van91I	CCANNNNNTGG	1 cut(s)	1188
VneI	GTGCAC	1 cut(s)	227
VpaK11BI	GGWCC	3 cut(s)	178, 340, 3091
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	6 cut(s)	738, 2067, 2389, 2408, 2498, 2542
XceI	RCATGY	1 cut(s)	2702
XmiI	GTMKAC	4 cut(s)	27, 192, 426, 1871
XmnI	GAANNNNTTC	2 cut(s)	1405, 2604
XspI	CTAG	5 cut(s)	413, 756, 834, 1272, 2456
ZraI	GACGTC	1 cut(s)	150
ZrmI	AGTACT	1 cut(s)	2538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.