Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002612

Physical Location & Seq

Genomic Coordinates Reverse (-)

31925827 .. 31928737

Gene Structure 2911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGTTGCAATTCTTTCAACTCCCCGGCCTGGATCAGTCAGATCCAAAAGGAACAATTCTTCAGCTGAGGGTGACGAGGAGCCTGAAATCACTGGGCGTGTGGCTGGTACTGTCCGGCGACATGTGCCCATCGATACTCGTGATCCCCCAGGAGCGATCCTTCATTTTTATGTTGGGGATGATTCTAATAGCTTGGTTGATGATCGATCATGTTCTAAGAAAGCTACAGCCTAAAGGAATTTGGTATTTAACTGTTCTTGGTTCTCTAGCAACCACCCAGCGAGAGTATGTTGCACTGCATGCATTTCGTCGTCTAAATATGCAGATGCAAGCAGCAATTCTTCGGCCCAGTCCTGAACACTTTCCAAAATACGAGCAGCAGTCCCCTGCTATGCCGGAATGCTTCACACCGAATTTCGTTGATCATTTGCATAGGACCTTTAATGGACCCCAGCTATCAGCAATCCAATGGGCTGCAATGCACACAGCTGCTGGTACAAGTGGTGGAAAGAGGCAAGATCCATGGCCTTTTACACTTGTTCAAGGACCTCCTGGAACTGGTAAGACACACACAGTCTGGGGAATGCTAAACGTCATCCATCTGGTTCAGTATCAGCAGTACTACACTTCTTTGCTTAAGAAACTAGCACCTGAAAGCTATAAGCAAAATAGTGAGAGCAATGTTGATAATGTTGCTATGGGATCAATAGATGAGGTTCTTCAGAACATGGACCAGAATCTCCTTAGAACACTACCCAAGCTCTGTCCAAAGCCTAGAATGTTAGTTTGCGCCCCTTCTAATGCTGCAACTGATGAGCTTCTTGCCCGTGTTCTTGACCGGGGATTCATTGATGGTGAGATGAAAGTTTATCGGCCTGATGTAGCCCGAGTAGGTGTTGACTCACAGACACGTGCTGCCCAGGCAGTATCTGTTGAGCGGAGAACTGAACAGCTTCTGGTCAAGAATCGTGAGGAAGTTTTAGGGTGGATGCATCAGTTGAGACTTCGTGAAGCGCAGTTGTCTGTGCAGATATCGCATCTTCAAAGAGAACTCACTGTTGCAGCTGCTGCTGTCCGTTCACAAGGATCGGTTGGTGTTGATCCTGATGTTTTGGTGGCTCGGGACCAGAATCGAGATGAATTGCTGCAGAATCTTGCTGCTGTGGTTGAAAGCAGGGATAAAACTCTAGTCGAGCTGTCTCGCCTGTTTATTTTAGATAGCAAGTTTCGTGCTGGTGGCAATTTCAACTTGGAAGAAGCTCGAGCTAATCTTGAGGCTAGTTTTGCCAATGAGGCTGAGATTGTTTTCACTACTGTCTCAAGCAGTGGTCGCAAGCTGTTTTCGCGTCTTTCTCATGGGTTTGATATGGTTGTGATTGATGAGGCAGCCCAAGCCAGTGAAGTGGGAGTTCTTCCGCCCCTTTCTCTTGGTGCTGCACGATGTGTTCTTGTTGGGGATCCTCAGCAGCTTCCTGCCACAGTTATTAGCAAGGCTGCTGGAACCTTGTTATACAGTAGAAGTCTGTTCGAAAGATTCCAACAAGCAAAATGTCCAACAATGTTGTTGTCTGTGCAGTATAGGATGCACCCTCAAATACGTGATTTTCCTTCAAAGTACTTCTACCAAGGACGCCTTACTGACAGTGAAAGTGTTGCTAATTTACCCGATGAAACCTACCACAAGGACCCTTTACTTAGACCTTACGTATTTTTTGACATTTCCCATGGGCGGGAATCCCACAGAGGGGGATCTGTCTCTTATCAGAACATACACGAAGCTCAGTTTTGTGTTCGTTTGTATGAGCATCTTCAGAAGTCCTTGAAAGCGTTGGGGTTGGGGAAAGTTTCTGTTGGCATAATCACACCATATAAACTGCAACTCAAATGCCTCCAACGTGAGTTTGAGGATATTTTAAATTCAGAAGAAGGGAAGGATATATATATTAACACCGTAGATGCTTTCCAAGGCCAAGAGCGTGATGTGATTATCATGTCCTGTGTGCGTGCTTCAACTCATGGTGTTGGTTTTGTTGCAGACATCCGCCGTATGAATGTAGCTCTTACTCGTGCAAGAAGGGCTCTTTGGGTCATGGGGAATGCAAGTGCCTTAATGCAGTGTGACGACTGGGCTGCATTGATTACTGATGCCAAAGCCAGGAACTGTTTTATGGACATAGAGACTCTTCCCAAAGAATTTCGGGTACCAAGGGTACCTTCTTACGCTCAATTACCAGGAAAGCCTTCTAATATGAGGGGTTTCAGGTCTGCGGGACCAAGGCATAGATCAATGGACATGCACATGGAATCCAGGTCAGGAACACCAGCAGAAGATGATGAGAAGTTGGGTCCATCAGTACTTTCTAGGAACGGAAGTTACCGGCCTATGAAACCTCCATTTGAGAATTCCTTGGACGACTTTGATCAATCAGGTGATAAATCTAGAGATGCCTGGCAATATGGCATACAGAAGAAGCATGGTCCTGCTGGGGTTATTGGAAGGAGAGACATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12 Cytochrom_B561

Protein Analysis

837

Amino Acids

93.85

Weight (kDa)

8.83

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_11	PF13086	152 - 497	2.3e-60	AAA domain
AAA_12	PF13087	504 - 700	5.4e-63	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19120 AT4G30100 AT4G30100
fragaria_vesca	FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860
malus_domestica	MD08G1179700.v1.1 MD15G1364900.v1.1
prunus_persica	Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1
pyrus_communis	pycom08g15390 pycom13g22410 pycom15g32730
rosa_chinensis	RchiOBHm_Chr7g0239841
rosa_laevigata	RLG00000000726
rosa_multiflora	Rmu_sc0000540.1_g000065 Rmu_sc0018325.1_g000001
rosa_roxburghii	Rroxscaffold_3G00220770
rosa_rugosa	Rorug07G0329900 Rorug07G0330000
rosa_samantha	Rh7AG483900 Rh7BG456900 Rh7CG501400 Rh7DG469600
rosa_wichuraiana	Rw7G040590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	2200, 2209
AccB1I	GGYRCC	2 cut(s)	2200, 2209
AccBSI	CCGCTC	1 cut(s)	937
AccII	CGCG	1 cut(s)	1345
AciI	CCGC	5 cut(s)	937, 1415, 1729, 2041, 2267
AcsI	RAATTY	5 cut(s)	237, 412, 1915, 2192, 2401
AcuI	CTGAAG	3 cut(s)	44, 704, 1793
AcvI	CACGTG	1 cut(s)	911
AcyI	GRCGYC	1 cut(s)	1630
AdeI	CACNNNGTG	1 cut(s)	1442
AfaI	GTAC	7 cut(s)	108, 496, 620, 1616, 2202, 2211, 2355
AfiI	CCNNNNNNNGG	7 cut(s)	28, 557, 1728, 1729, 1743, 1744, 2154
AflII	CTTAAG	1 cut(s)	635
AflIII	ACRYGT	2 cut(s)	120, 908
AgsI	TTSAA	8 cut(s)	17, 542, 1043, 1169, 1246, 1611, 1822, 2010
AjnI	CCWGG	8 cut(s)	27, 147, 550, 918, 2153, 2230, 2306, 2447
AjuI	GAANNNNNNNTTGG	4 cut(s)	2065, 2097, 2197, 2229
Alw26I	GTCTC	6 cut(s)	994, 1203, 1321, 1759, 2171, 2496
AlwNI	CAGNNNCTG	5 cut(s)	491, 929, 955, 1067, 2160
Ama87I	CYCGRG	3 cut(s)	885, 1119, 1260
AoxI	GGCC	6 cut(s)	25, 344, 524, 872, 1966, 2378
ApoI	RAATTY	5 cut(s)	237, 412, 1915, 2192, 2401
Asp700I	GAANNNNTTC	3 cut(s)	360, 951, 2239
Asp718I	GGTACC	2 cut(s)	2200, 2209
AspLEI	GCGC	2 cut(s)	791, 1015
AsuC2I	CCSGG	2 cut(s)	24, 839
AsuHPI	GGTGA	3 cut(s)	82, 866, 2441
AsuII	TTCGAA	1 cut(s)	1527
AvaI	CYCGRG	3 cut(s)	885, 1119, 1260
AvaII	GGWCC	9 cut(s)	435, 446, 545, 730, 1123, 1684, 2270, 2345, 2477
BaeGI	GKGCMC	1 cut(s)	128
BamHI	GGATCC	1 cut(s)	1456
BanI	GGYRCC	2 cut(s)	2200, 2209
BanII	GRGCYC	1 cut(s)	2080
BauI	CACGAG	2 cut(s)	137, 2064
BbrPI	CACGTG	1 cut(s)	911
BbvCI	CCTCAGC	2 cut(s)	65, 1461
BccI	CCATC	4 cut(s)	136, 606, 845, 2356
BceAI	ACGGC	1 cut(s)	2028
BcgI	CGANNNNNNTGC	4 cut(s)	287, 321, 2111, 2145
BciT130I	CCWGG	8 cut(s)	29, 149, 552, 920, 2155, 2232, 2308, 2449
BclI	TGATCA	2 cut(s)	421, 2419
BcnI	CCSGG	2 cut(s)	24, 839
BcoDI	GTCTC	6 cut(s)	994, 1203, 1321, 1759, 2171, 2496
BfaI	CTAG	8 cut(s)	266, 644, 774, 1187, 1278, 2361, 2439, 2509
BfmI	CTRYAG	2 cut(s)	224, 1145
BfrI	CTTAAG	1 cut(s)	635
BglI	GCCNNNNNGGC	1 cut(s)	1292
BmcAI	AGTACT	3 cut(s)	620, 1616, 2355
Bme18I	GGWCC	9 cut(s)	435, 446, 545, 730, 1123, 1684, 2270, 2345, 2477
BmeT110I	CYCGRG	3 cut(s)	885, 1119, 1260
BmrI	ACTGGG	3 cut(s)	101, 342, 2134
BmsI	GCATC	9 cut(s)	315, 978, 1000, 1045, 1572, 1813, 1945, 2134, 2434
BmuI	ACTGGG	3 cut(s)	101, 342, 2134
Bpu10I	CCTNAGC	2 cut(s)	65, 1461
Bpu14I	TTCGAA	1 cut(s)	1527
BpuEI	CTTGAG	2 cut(s)	1292, 1303
BpuMI	CCSGG	2 cut(s)	24, 839
Bsa29I	ATCGAT	2 cut(s)	131, 204
BsaAI	YACGTR	3 cut(s)	911, 1598, 1705
BsaHI	GRCGYC	1 cut(s)	1630
Bsc4I	CCNNNNNNNGG	7 cut(s)	28, 557, 1728, 1729, 1743, 1744, 2154
Bse118I	RCCGGY	1 cut(s)	2376
Bse1I	ACTGG	5 cut(s)	96, 348, 562, 1395, 2129
Bse3DI	GCAATG	2 cut(s)	483, 685
BseBI	CCWGG	8 cut(s)	29, 149, 552, 920, 2155, 2232, 2308, 2449
BseCI	ATCGAT	2 cut(s)	131, 204
BseGI	GGATG	5 cut(s)	183, 594, 993, 1587, 2037
BseLI	CCNNNNNNNGG	7 cut(s)	28, 557, 1728, 1729, 1743, 1744, 2154
BseMI	GCAATG	2 cut(s)	483, 685
BseMII	CTCAG	4 cut(s)	56, 1287, 1475, 1793
BseNI	ACTGG	5 cut(s)	96, 348, 562, 1395, 2129
BseRI	GAGGAG	1 cut(s)	91
BseSI	GKGCMC	1 cut(s)	128
BseYI	CCCAGC	3 cut(s)	276, 450, 2483
BsgI	GTGCAG	3 cut(s)	1046, 1419, 1592
Bsh1236I	CGCG	1 cut(s)	1345
BshFI	GGCC	6 cut(s)	27, 346, 526, 874, 1968, 2380
BshNI	GGYRCC	2 cut(s)	2200, 2209
BshVI	ATCGAT	2 cut(s)	131, 204
BsiHKCI	CYCGRG	3 cut(s)	885, 1119, 1260
BsiSI	CCGG	5 cut(s)	24, 114, 395, 838, 2377
BslFI	GGGAC	3 cut(s)	367, 1136, 2283
BslI	CCNNNNNNNGG	7 cut(s)	28, 557, 1728, 1729, 1743, 1744, 2154
BsmAI	GTCTC	6 cut(s)	994, 1203, 1321, 1759, 2171, 2496
BsmFI	GGGAC	3 cut(s)	367, 1136, 2283
BsmI	GAATGC	3 cut(s)	404, 588, 2101
BsnI	GGCC	6 cut(s)	27, 346, 526, 874, 1968, 2380
BsoBI	CYCGRG	3 cut(s)	885, 1119, 1260
Bsp119I	TTCGAA	1 cut(s)	1527
Bsp1286I	GDGCHC	2 cut(s)	128, 2080
Bsp19I	CCATGG	2 cut(s)	521, 1723
BspACI	CCGC	5 cut(s)	937, 1415, 1729, 2041, 2267
BspANI	GGCC	6 cut(s)	27, 346, 526, 874, 1968, 2380
BspCNI	CTCAG	4 cut(s)	57, 1288, 1474, 1792
BspDI	ATCGAT	2 cut(s)	131, 204
BspFNI	CGCG	1 cut(s)	1345
BspMAI	CTGCAG	1 cut(s)	1149
BspT104I	TTCGAA	1 cut(s)	1527
BspT107I	GGYRCC	2 cut(s)	2200, 2209
BspTI	CTTAAG	1 cut(s)	635
BsrBI	CCGCTC	1 cut(s)	937
BsrDI	GCAATG	2 cut(s)	483, 685
BsrFI	RCCGGY	1 cut(s)	2376
BsrI	ACTGG	5 cut(s)	96, 348, 562, 1395, 2129
BssAI	RCCGGY	1 cut(s)	2376
BssNI	GRCGYC	1 cut(s)	1630
BssSI	CACGAG	2 cut(s)	137, 2064
BssT1I	CCWWGG	7 cut(s)	521, 1624, 1723, 1963, 2204, 2273, 2406
Bst2BI	CACGAG	2 cut(s)	137, 2064
Bst2UI	CCWGG	8 cut(s)	29, 149, 552, 920, 2155, 2232, 2308, 2449
Bst6I	CTCTTC	1 cut(s)	2187
BstACI	GRCGYC	1 cut(s)	1630
BstAFI	CTTAAG	1 cut(s)	635
BstAPI	GCANNNNNTGC	2 cut(s)	299, 1067
BstBAI	YACGTR	3 cut(s)	911, 1598, 1705
BstBI	TTCGAA	1 cut(s)	1527
BstC8I	GCNNGC	4 cut(s)	300, 330, 1334, 2004
BstDEI	CTNAG	7 cut(s)	65, 215, 743, 1296, 1461, 1694, 1779
BstDSI	CCRYGG	2 cut(s)	521, 1723
BstF5I	GGATG	5 cut(s)	183, 594, 993, 1587, 2037
BstFNI	CGCG	1 cut(s)	1345
BstHHI	GCGC	2 cut(s)	791, 1015
BstMAI	GTCTC	6 cut(s)	994, 1203, 1321, 1759, 2171, 2496
BstNI	CCWGG	8 cut(s)	29, 149, 552, 920, 2155, 2232, 2308, 2449
BstNSI	RCATGY	3 cut(s)	124, 302, 2296
BstSFI	CTRYAG	2 cut(s)	224, 1145
BstSLI	GKGCMC	1 cut(s)	128
BstSNI	TACGTA	1 cut(s)	1705
BstUI	CGCG	1 cut(s)	1345
BstX2I	RGATCY	4 cut(s)	40, 517, 1456, 1748
BstXI	CCANNNNNNTGG	1 cut(s)	1402
BstYI	RGATCY	4 cut(s)	40, 517, 1456, 1748
Bsu15I	ATCGAT	2 cut(s)	131, 204
BsuRI	GGCC	6 cut(s)	27, 346, 526, 874, 1968, 2380
BsuTUI	ATCGAT	2 cut(s)	131, 204
BtgI	CCRYGG	2 cut(s)	521, 1723
BtsCI	GGATG	5 cut(s)	183, 594, 993, 1587, 2037
BtsI	GCAGTG	3 cut(s)	293, 1330, 2120
BtsIMutI	CAGTG	7 cut(s)	89, 293, 1053, 1330, 1402, 1648, 2120
Cac8I	GCNNGC	4 cut(s)	300, 330, 1334, 2004
CaiI	CAGNNNCTG	5 cut(s)	491, 929, 955, 1067, 2160
CfoI	GCGC	2 cut(s)	791, 1015
Cfr10I	RCCGGY	1 cut(s)	2376
ClaI	ATCGAT	2 cut(s)	131, 204
CseI	GACGC	2 cut(s)	1334, 1638
Csp6I	GTAC	7 cut(s)	107, 495, 619, 1615, 2201, 2210, 2354
CviQI	GTAC	7 cut(s)	107, 495, 619, 1615, 2201, 2210, 2354
DdeI	CTNAG	7 cut(s)	65, 215, 743, 1296, 1461, 1694, 1779
DraI	TTTAAA	1 cut(s)	1914
DraIII	CACNNNGTG	1 cut(s)	1442
Eam1104I	CTCTTC	1 cut(s)	2187
EarI	CTCTTC	1 cut(s)	2187
EciI	GGCGGA	2 cut(s)	1404, 2030
Eco105I	TACGTA	1 cut(s)	1705
Eco130I	CCWWGG	7 cut(s)	521, 1624, 1723, 1963, 2204, 2273, 2406
Eco24I	GRGCYC	1 cut(s)	2080
Eco32I	GATATC	1 cut(s)	1032
Eco47I	GGWCC	9 cut(s)	435, 446, 545, 730, 1123, 1684, 2270, 2345, 2477
Eco57I	CTGAAG	3 cut(s)	44, 704, 1793
Eco72I	CACGTG	1 cut(s)	911
Eco88I	CYCGRG	3 cut(s)	885, 1119, 1260
EcoO109I	RGGNCCY	3 cut(s)	435, 545, 1684
EcoRI	GAATTC	1 cut(s)	2401
EcoRII	CCWGG	8 cut(s)	27, 147, 550, 918, 2153, 2230, 2306, 2447
EcoRV	GATATC	1 cut(s)	1032
EcoT14I	CCWWGG	7 cut(s)	521, 1624, 1723, 1963, 2204, 2273, 2406
EcoT22I	ATGCAT	2 cut(s)	304, 993
EcoT38I	GRGCYC	1 cut(s)	2080
ErhI	CCWWGG	7 cut(s)	521, 1624, 1723, 1963, 2204, 2273, 2406
FalI	AAGNNNNNCTT	4 cut(s)	1617, 1649, 2197, 2229
FaqI	GGGAC	3 cut(s)	367, 1136, 2283
FauI	CCCGC	2 cut(s)	1722, 2260
FbaI	TGATCA	2 cut(s)	421, 2419
FokI	GGATG	5 cut(s)	190, 581, 1000, 1594, 2024
FriOI	GRGCYC	1 cut(s)	2080
FspBI	CTAG	8 cut(s)	266, 644, 774, 1187, 1278, 2361, 2439, 2509
GlaI	GCGC	2 cut(s)	790, 1014
GsaI	CCCAGC	3 cut(s)	280, 454, 2487
HaeIII	GGCC	6 cut(s)	27, 346, 526, 874, 1968, 2380
HapII	CCGG	5 cut(s)	24, 114, 395, 838, 2377
HgaI	GACGC	2 cut(s)	1334, 1638
HhaI	GCGC	2 cut(s)	791, 1015
Hin1I	GRCGYC	1 cut(s)	1630
Hin6I	GCGC	2 cut(s)	789, 1013
HinP1I	GCGC	2 cut(s)	789, 1013
HincII	GTYRAC	1 cut(s)	898
HindII	GTYRAC	1 cut(s)	898
HpaII	CCGG	5 cut(s)	24, 114, 395, 838, 2377
HphI	GGTGA	3 cut(s)	82, 866, 2441
Hpy166II	GTNNAC	2 cut(s)	898, 1079
Hpy188I	TCNGA	5 cut(s)	40, 723, 1764, 1812, 1921
Hpy8I	GTNNAC	2 cut(s)	898, 1079
Hpy99I	CGWCG	1 cut(s)	312
HpyAV	CCTTC	9 cut(s)	169, 804, 1617, 1919, 1924, 2067, 2223, 2250, 2490
HpyCH4IV	ACGT	5 cut(s)	591, 910, 1597, 1704, 1894
HpyF3I	CTNAG	7 cut(s)	65, 215, 743, 1296, 1461, 1694, 1779
HpySE526I	ACGT	5 cut(s)	591, 910, 1597, 1704, 1894
Hsp92I	GRCGYC	1 cut(s)	1630
HspAI	GCGC	2 cut(s)	789, 1013
KpnI	GGTACC	2 cut(s)	2204, 2213
Ksp22I	TGATCA	2 cut(s)	421, 2419
LmnI	GCTCC	2 cut(s)	78, 151
LweI	GCATC	9 cut(s)	315, 978, 1000, 1045, 1572, 1813, 1945, 2134, 2434
MaeI	CTAG	8 cut(s)	266, 644, 774, 1187, 1278, 2361, 2439, 2509
MaeII	ACGT	5 cut(s)	591, 910, 1597, 1704, 1894
MaeIII	GTNAC	3 cut(s)	70, 2117, 2372
MbiI	CCGCTC	1 cut(s)	937
MflI	RGATCY	4 cut(s)	40, 517, 1456, 1748
MhlI	GDGCHC	2 cut(s)	128, 2080
MlyI	GAGTC	2 cut(s)	893, 2173
MmeI	TCCRAC	3 cut(s)	1561, 1577, 1915
Mph1103I	ATGCAT	2 cut(s)	304, 993
MroXI	GAANNNNTTC	3 cut(s)	360, 951, 2239
MseI	TTAA	6 cut(s)	248, 441, 636, 1913, 1944, 2108
MslI	CAYNNNNRTG	2 cut(s)	167, 2297
MspA1I	CMGCKG	3 cut(s)	64, 488, 1064
MspCI	CTTAAG	1 cut(s)	635
MspI	CCGG	5 cut(s)	24, 114, 395, 838, 2377
Mva1269I	GAATGC	3 cut(s)	404, 588, 2101
MvaI	CCWGG	8 cut(s)	29, 149, 552, 920, 2155, 2232, 2308, 2449
MvnI	CGCG	1 cut(s)	1345
NciI	CCSGG	2 cut(s)	24, 839
NcoI	CCATGG	2 cut(s)	521, 1723
NmuCI	GTSAC	2 cut(s)	70, 2117
NsiI	ATGCAT	2 cut(s)	304, 993
NspI	RCATGY	3 cut(s)	124, 302, 2296
NspV	TTCGAA	1 cut(s)	1527
PaeI	GCATGC	1 cut(s)	302
PaeR7I	CTCGAG	1 cut(s)	1260
PciI	ACATGT	1 cut(s)	120
PctI	GAATGC	3 cut(s)	404, 588, 2101
PdmI	GAANNNNTTC	3 cut(s)	360, 951, 2239
PfeI	GAWTC	9 cut(s)	181, 736, 843, 964, 1129, 1150, 1533, 1733, 2303
PfoI	TCCNGGA	1 cut(s)	550
PleI	GAGTC	2 cut(s)	893, 2173
PmaCI	CACGTG	1 cut(s)	911
PmlI	CACGTG	1 cut(s)	911
PpsI	GAGTC	2 cut(s)	893, 2173
Ppu21I	YACGTR	3 cut(s)	911, 1598, 1705
PpuMI	RGGWCCY	3 cut(s)	435, 545, 1684
PscI	ACATGT	1 cut(s)	120
Psp5II	RGGWCCY	3 cut(s)	435, 545, 1684
Psp6I	CCWGG	8 cut(s)	27, 147, 550, 918, 2153, 2230, 2306, 2447
PspCI	CACGTG	1 cut(s)	911
PspFI	CCCAGC	3 cut(s)	276, 450, 2483
PspGI	CCWGG	8 cut(s)	27, 147, 550, 918, 2153, 2230, 2306, 2447
PspPPI	RGGWCCY	3 cut(s)	435, 545, 1684
PspXI	VCTCGAGB	1 cut(s)	1260
PsrI	GAACNNNNNNTAC	2 cut(s)	2357, 2389
PstI	CTGCAG	1 cut(s)	1149
PstNI	CAGNNNCTG	5 cut(s)	491, 929, 955, 1067, 2160
PsuI	RGATCY	4 cut(s)	40, 517, 1456, 1748
PvuII	CAGCTG	3 cut(s)	64, 488, 1064
RsaI	GTAC	7 cut(s)	108, 496, 620, 1616, 2202, 2211, 2355
RsaNI	GTAC	7 cut(s)	107, 495, 619, 1615, 2201, 2210, 2354
RseI	CAYNNNNRTG	2 cut(s)	167, 2297
SaqAI	TTAA	6 cut(s)	248, 441, 636, 1913, 1944, 2108
ScaI	AGTACT	3 cut(s)	620, 1616, 2355
SchI	GAGTC	2 cut(s)	893, 2173
SduI	GDGCHC	2 cut(s)	128, 2080
SfaNI	GCATC	9 cut(s)	315, 978, 1000, 1045, 1572, 1813, 1945, 2134, 2434
SfcI	CTRYAG	2 cut(s)	224, 1145
Sfr274I	CTCGAG	1 cut(s)	1260
SfuI	TTCGAA	1 cut(s)	1527
SinI	GGWCC	9 cut(s)	435, 446, 545, 730, 1123, 1684, 2270, 2345, 2477
SlaI	CTCGAG	1 cut(s)	1260
SmiMI	CAYNNNNRTG	2 cut(s)	167, 2297
SmlI	CTYRAG	4 cut(s)	635, 1260, 1271, 1318
SmoI	CTYRAG	4 cut(s)	635, 1260, 1271, 1318
SnaBI	TACGTA	1 cut(s)	1705
SphI	GCATGC	1 cut(s)	302
SsiI	CCGC	5 cut(s)	937, 1415, 1729, 2041, 2267
SspMI	CTAG	8 cut(s)	266, 644, 774, 1187, 1278, 2361, 2439, 2509
StyI	CCWWGG	7 cut(s)	521, 1624, 1723, 1963, 2204, 2273, 2406
TaiI	ACGT	5 cut(s)	594, 913, 1600, 1707, 1897
TaqI	TCGA	6 cut(s)	131, 204, 1132, 1191, 1261, 1527
TatI	WGTACW	3 cut(s)	618, 1614, 2353
TfiI	GAWTC	9 cut(s)	181, 736, 843, 964, 1129, 1150, 1533, 1733, 2303
Tru1I	TTAA	6 cut(s)	248, 441, 636, 1913, 1944, 2108
Tru9I	TTAA	6 cut(s)	248, 441, 636, 1913, 1944, 2108
TscAI	CASTG	7 cut(s)	96, 300, 1060, 1330, 1402, 1648, 2120
TseFI	GTSAC	2 cut(s)	70, 2117
Tsp45I	GTSAC	2 cut(s)	70, 2117
TspDTI	ATGAA	7 cut(s)	151, 835, 875, 1152, 1683, 2063, 2399
TspGWI	ACGGA	2 cut(s)	1064, 2382
TspRI	CASTG	7 cut(s)	96, 300, 1060, 1330, 1402, 1648, 2120
Vha464I	CTTAAG	1 cut(s)	635
VpaK11BI	GGWCC	9 cut(s)	435, 446, 545, 730, 1123, 1684, 2270, 2345, 2477
XapI	RAATTY	5 cut(s)	237, 412, 1915, 2192, 2401
XbaI	TCTAGA	1 cut(s)	2438
XceI	RCATGY	3 cut(s)	124, 302, 2296
XhoI	CTCGAG	1 cut(s)	1260
XmnI	GAANNNNTTC	3 cut(s)	360, 951, 2239
XspI	CTAG	8 cut(s)	266, 644, 774, 1187, 1278, 2361, 2439, 2509
ZrmI	AGTACT	3 cut(s)	620, 1616, 2355
Zsp2I	ATGCAT	2 cut(s)	304, 993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.