Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009031

Physical Location & Seq

Genomic Coordinates Forward (+)

33424620 .. 33427058

Gene Structure 2439 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGCAAACGTTATAAAAAAAAAAATACATTACTCTAATCAATTTCATTTGACCCAAATCCGTCAACCTTCAAAACTCCTTGCTTTACAAGTCCACACGACTCATTCAAATCCTTCATTTCATTCCCACTTTCCCTTTCCTCTTCACAAACCTCATGGAGTAGCGCCAAGCCTTTTTTTTCTCACCTTCCTATTTTTTCTTCTCTTTCGAGCAGCAAATCCTAATAATTCACGAGTCATGAAATACACCATTCATGCAGTCTTGCTATGGACGCTCAGCTTCCTCCTGTTGTCGCAGCCGATCACTGCGCAAACCGCATCGCCTCCTCAGCCGCAAACCAACGGCTCAAGCTCGCCGAAATTCAACCTCAAGATGGCGGTGGTAATGGTGGTTCTCGTAGTTGCGTTCTTCATCTTGGGCTTCCTCTCCGTCTACACCCGTCAGTGCGCCCAGACCCGCCTCCAGGGGCGCGTGGACCTCGCCCTTCGAAACGGCTCCCTCATGGCGCGTGGCCTTGACCCCGCTGTCATCGAAACCTTCCCTGCCTTCATATACTCCGACGTCAAGGCGCTCAAGCTCGGCCAGGGCGCTCTGGAATGTGCCGTATGTTTACAGGAGTTTCAAGACCATGAAACGCTGCGTTTGATCCCCAACTGCGATCACGTATTCCACCCCGATTGTATTGACACGTTGCTGCTCTCTCCCTCGACTTGCCCGGTTTGCCGGGCTTACCTGGTTCCTAAACCCGGAGAAGAGCCGTACACTTGGGTTGATCCGAATGAAGAGGATATCGAGTCGGGTCAATCTGACACTGCGCCGTGTAGAGCAGAAGCATCACCACCTTCGCTACCGTCGCATATGCCACCCCAGGAGGAATCTCCATCTCCAGCACCTCCAGTGTTTATCAATCTGGTGAATGGAAGTGAAGCCTACAATCAAAGAGGCCCACCTCGGTCTAGGTCAACGGGTTTTGGACCGCCTCGGTCGAGATCAACCGGGATGCGATTTACTAGAGTATTATTTCCACGATCACATTCGACCGGACACTCGCTGGTTAAACCAGGTGAGAACGTCGAAAAGTTTACACTAAGGTTACCGGACGAGGTACGTGCTCAACTAGTGAATTCAGCCTTGATTCGTAGCAGGAGTAACAACGTGGCATTTCCAAGGGCCGGCAGTGTGAGAAAAGATTTAAGTAGTGAGAGTGGGCGTGGAAAAAGCCCCGGTTTGTTTGAGCGGTTTGACCCAAGTTCGCGGTCCAACCGGTCGGGGCGATCAGGCCGTTGGGCTTTCTCAATGTTGCCGCCTTTTGTGTCTAGAAACGGGTCTGTTAGGAACCAAAGTGGTGATAACGACGTTGCAACTCAGTCGGCAGCTGGGCCATCGGAATTGATTAGAGCACCGTTGGACCATATTGGCGGCGATGAACGGTCAGCTGATACCTTACGGCCAAGGGATCAAGAAATTTTGTGTACATATCCTTTTAAAATTGAGTTCATTGTCTTTGTTTTTATTCATTTCAAAAGTTTGAAAGAGAATACGTGTAAGAAAATGATTGATTACATTTCCCTTGCTAACTTATGTTTTATTGAAAACAATGTCACTTTTACTCTATCATTGTATCATGTAAGAAGATATTATTGTGAATCTATTAAAGAAGGAAAAAAAAACAAAAATTTAATAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043207 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

563

Amino Acids

62.74

Weight (kDa)

9.41

Isoelectric Point (pI)

60.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	199 - 242	4.4e-11	Ring finger domain
zf-RING_11	PF17123	199 - 228	6.4e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	199 - 241	4.4e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_5	PF14634	199 - 242	5.6e-06	zinc-RING finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35330 AT2G34990 AT2G34990 AT2G35000
fragaria_vesca	FvH4_5g36230
malus_domestica	MD08G1190600.v1.1 MD15G1377900.v1.1
prunus_persica	Prupe.1G524600_v2.0.a1
pyrus_communis	pycom08g16380 pycom15g33890
rosa_chinensis	RchiOBHm_Chr7g0238061
rosa_laevigata	RLG00000000944
rosa_multiflora	Rmu_co8161516.1_g000001 Rmu_sc0002586.1_g000017 Rmu_sc0024940.1_g000001
rosa_roxburghii	Rroxscaffold_3G00223410
rosa_rugosa	Rorug07G0310300.1
rosa_samantha	Rh7AG465500 Rh7BG436500 Rh7CG483800 Rh7DG452200
rosa_wichuraiana	Rw7G038560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	14
AasI	GACNNNNNNGTC	1 cut(s)	524
AatII	GACGTC	1 cut(s)	564
Acc16I	TGCGCA	1 cut(s)	309
AccBSI	CCGCTC	1 cut(s)	1237
AccI	GTMKAC	1 cut(s)	432
AccII	CGCG	3 cut(s)	471, 508, 1255
AclI	AACGTT	1 cut(s)	9
AclWI	GGATC	3 cut(s)	640, 767, 1464
AcoI	YGGCCR	2 cut(s)	580, 1448
AcsI	RAATTY	4 cut(s)	359, 1123, 1464, 1675
AcyI	GRCGYC	1 cut(s)	561
AfaI	GTAC	3 cut(s)	761, 1107, 1474
AfiI	CCNNNNNNNGG	4 cut(s)	373, 463, 746, 1172
AflIII	ACRYGT	2 cut(s)	687, 1541
AgeI	ACCGGT	1 cut(s)	1263
AgsI	TTSAA	7 cut(s)	72, 108, 364, 623, 1522, 1531, 1592
AhlI	ACTAGT	1 cut(s)	1117
AjnI	CCWGG	5 cut(s)	462, 582, 732, 867, 1060
AluBI	AGCT	5 cut(s)	279, 351, 577, 1376, 1436
AluI	AGCT	5 cut(s)	279, 351, 577, 1376, 1436
Alw21I	GWGCWC	2 cut(s)	1114, 1402
AlwI	GGATC	3 cut(s)	640, 767, 1464
AoxI	GGCC	7 cut(s)	511, 580, 943, 1170, 1279, 1379, 1448
ApeKI	GCWGC	5 cut(s)	212, 295, 637, 694, 1373
ApoI	RAATTY	4 cut(s)	359, 1123, 1464, 1675
AsiGI	ACCGGT	1 cut(s)	1263
AspLEI	GCGC	8 cut(s)	166, 310, 449, 471, 508, 571, 590, 817
AspS9I	GGNCC	7 cut(s)	475, 944, 974, 1170, 1257, 1379, 1408
AsuC2I	CCSGG	5 cut(s)	716, 725, 747, 997, 1224
AsuHPI	GGTGA	5 cut(s)	175, 828, 925, 1076, 1358
AsuII	TTCGAA	1 cut(s)	487
AvaII	GGWCC	4 cut(s)	475, 974, 1257, 1408
BauI	CACGAG	1 cut(s)	231
Bbv12I	GWGCWC	2 cut(s)	1114, 1402
BbvCI	CCTCAGC	1 cut(s)	327
BbvI	GCAGC	5 cut(s)	224, 307, 624, 681, 1385
BccI	CCATC	3 cut(s)	367, 889, 1390
BceAI	ACGGC	7 cut(s)	358, 508, 587, 742, 802, 1266, 1463
BcgI	CGANNNNNNTGC	4 cut(s)	1091, 1125, 1350, 1384
BciT130I	CCWGG	5 cut(s)	464, 584, 734, 869, 1062
BcnI	CCSGG	5 cut(s)	716, 725, 747, 997, 1224
BcuI	ACTAGT	1 cut(s)	1117
BfaI	CTAG	4 cut(s)	957, 1011, 1118, 1317
BfoI	RGCGCY	3 cut(s)	167, 572, 591
BisI	GCNGC	8 cut(s)	213, 296, 332, 638, 695, 1304, 1374, 1420
BlpI	GCTNAGC	1 cut(s)	275
BlsI	GCNGC	8 cut(s)	214, 297, 333, 639, 696, 1305, 1375, 1421
Bme18I	GGWCC	4 cut(s)	475, 974, 1257, 1408
BmgT120I	GGNCC	7 cut(s)	475, 944, 974, 1170, 1257, 1379, 1408
BmiI	GGNNCC	3 cut(s)	496, 738, 1337
BmsI	GCATC	3 cut(s)	326, 842, 990
BpmI	CTGGAG	3 cut(s)	446, 870, 879
Bpu10I	CCTNAGC	1 cut(s)	327
Bpu1102I	GCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	1 cut(s)	487
BpuEI	CTTGAG	3 cut(s)	331, 353, 557
BpuMI	CCSGG	5 cut(s)	716, 725, 747, 997, 1224
BsaAI	YACGTR	3 cut(s)	664, 1109, 1542
BsaHI	GRCGYC	1 cut(s)	561
BsaJI	CCNNGG	8 cut(s)	463, 583, 867, 950, 980, 1166, 1222, 1451
BsaWI	WCCGGW	3 cut(s)	1040, 1096, 1263
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 463, 746, 1172
Bse118I	RCCGGY	2 cut(s)	1172, 1263
Bse1I	ACTGG	1 cut(s)	896
BseBI	CCWGG	5 cut(s)	464, 584, 734, 869, 1062
BseDI	CCNNGG	8 cut(s)	463, 583, 867, 950, 980, 1166, 1222, 1451
BseGI	GGATG	1 cut(s)	1005
BseLI	CCNNNNNNNGG	4 cut(s)	373, 463, 746, 1172
BseMII	CTCAG	3 cut(s)	289, 341, 1379
BseNI	ACTGG	1 cut(s)	896
BseRI	GAGGAG	1 cut(s)	315
BseXI	GCAGC	5 cut(s)	224, 307, 624, 681, 1385
BseYI	CCCAGC	1 cut(s)	1376
Bsh1236I	CGCG	3 cut(s)	471, 508, 1255
Bsh1285I	CGRYCG	3 cut(s)	986, 1041, 1268
BshFI	GGCC	7 cut(s)	513, 582, 945, 1172, 1281, 1381, 1450
BshTI	ACCGGT	1 cut(s)	1263
BsiEI	CGRYCG	3 cut(s)	986, 1041, 1268
BsiHKAI	GWGCWC	2 cut(s)	1114, 1402
BsiSI	CCGG	9 cut(s)	716, 724, 747, 996, 1041, 1097, 1173, 1224, 1264
BslI	CCNNNNNNNGG	4 cut(s)	373, 463, 746, 1172
BsnI	GGCC	7 cut(s)	513, 582, 945, 1172, 1281, 1381, 1450
Bsp119I	TTCGAA	1 cut(s)	487
Bsp1286I	GDGCHC	2 cut(s)	1114, 1402
Bsp1407I	TGTACA	1 cut(s)	1472
Bsp143I	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
Bsp1720I	GCTNAGC	1 cut(s)	275
BspANI	GGCC	7 cut(s)	513, 582, 945, 1172, 1281, 1381, 1450
BspCNI	CTCAG	3 cut(s)	288, 340, 1378
BspFNI	CGCG	3 cut(s)	471, 508, 1255
BspHI	TCATGA	1 cut(s)	237
BspLI	GGNNCC	3 cut(s)	496, 738, 1337
BspPI	GGATC	3 cut(s)	640, 767, 1464
BspQI	GCTCTTC	1 cut(s)	747
BspT104I	TTCGAA	1 cut(s)	487
BsrBI	CCGCTC	1 cut(s)	1237
BsrFI	RCCGGY	2 cut(s)	1172, 1263
BsrGI	TGTACA	1 cut(s)	1472
BsrI	ACTGG	1 cut(s)	896
BssAI	RCCGGY	2 cut(s)	1172, 1263
BssECI	CCNNGG	8 cut(s)	463, 583, 867, 950, 980, 1166, 1222, 1451
BssMI	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
BssNI	GRCGYC	1 cut(s)	561
BssSI	CACGAG	1 cut(s)	231
BssT1I	CCWWGG	2 cut(s)	1166, 1451
Bst2BI	CACGAG	1 cut(s)	231
Bst2UI	CCWGG	5 cut(s)	464, 584, 734, 869, 1062
Bst4CI	ACNGT	3 cut(s)	852, 1404, 1431
Bst6I	CTCTTC	3 cut(s)	147, 747, 777
BstACI	GRCGYC	1 cut(s)	561
BstAUI	TGTACA	1 cut(s)	1472
BstBAI	YACGTR	3 cut(s)	664, 1109, 1542
BstBI	TTCGAA	1 cut(s)	487
BstC8I	GCNNGC	2 cut(s)	353, 1174
BstDEI	CTNAG	4 cut(s)	275, 327, 1088, 1365
BstEII	GGTNACC	1 cut(s)	1092
BstF5I	GGATG	1 cut(s)	1005
BstFNI	CGCG	3 cut(s)	471, 508, 1255
BstH2I	RGCGCY	3 cut(s)	167, 572, 591
BstHHI	GCGC	8 cut(s)	166, 310, 449, 471, 508, 571, 590, 817
BstKTI	GATC	8 cut(s)	303, 648, 661, 775, 992, 1031, 1277, 1459
BstMBI	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
BstMCI	CGRYCG	3 cut(s)	986, 1041, 1268
BstMWI	GCNNNNNNNGC	5 cut(s)	271, 314, 328, 720, 853
BstNI	CCWGG	5 cut(s)	464, 584, 734, 869, 1062
BstPI	GGTNACC	1 cut(s)	1092
BstUI	CGCG	3 cut(s)	471, 508, 1255
BstV1I	GCAGC	5 cut(s)	224, 307, 624, 681, 1385
BsuRI	GGCC	7 cut(s)	513, 582, 945, 1172, 1281, 1381, 1450
BtgZI	GCGATG	2 cut(s)	303, 1437
BtsCI	GGATG	1 cut(s)	1005
BtsI	GCAGTG	3 cut(s)	303, 810, 1183
BtsIMutI	CAGTG	5 cut(s)	303, 449, 810, 903, 1183
Cac8I	GCNNGC	2 cut(s)	353, 1174
CciI	TCATGA	1 cut(s)	237
CfoI	GCGC	8 cut(s)	166, 310, 449, 471, 508, 571, 590, 817
Cfr10I	RCCGGY	2 cut(s)	1172, 1263
Cfr13I	GGNCC	7 cut(s)	475, 944, 974, 1170, 1257, 1379, 1408
CseI	GACGC	1 cut(s)	280
CsiI	ACCWGGT	2 cut(s)	732, 1060
Csp6I	GTAC	3 cut(s)	760, 1106, 1473
CspAI	ACCGGT	1 cut(s)	1263
CspCI	CAANNNNNGTGG	2 cut(s)	659, 694
CviAII	CATG	6 cut(s)	155, 238, 254, 502, 629, 1625
CviQI	GTAC	3 cut(s)	760, 1106, 1473
DdeI	CTNAG	4 cut(s)	275, 327, 1088, 1365
DpnI	GATC	8 cut(s)	302, 647, 660, 774, 991, 1030, 1276, 1458
DpnII	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
DraI	TTTAAA	1 cut(s)	1486
DrdI	GACNNNNNNGTC	1 cut(s)	524
DseDI	GACNNNNNNGTC	1 cut(s)	524
EaeI	YGGCCR	2 cut(s)	580, 1448
Eam1104I	CTCTTC	3 cut(s)	147, 747, 777
EarI	CTCTTC	3 cut(s)	147, 747, 777
Eco130I	CCWWGG	2 cut(s)	1166, 1451
Eco32I	GATATC	1 cut(s)	790
Eco47I	GGWCC	4 cut(s)	475, 974, 1257, 1408
Eco91I	GGTNACC	1 cut(s)	1092
EcoO65I	GGTNACC	1 cut(s)	1092
EcoRI	GAATTC	1 cut(s)	1123
EcoRII	CCWGG	5 cut(s)	462, 582, 732, 867, 1060
EcoRV	GATATC	1 cut(s)	790
EcoT14I	CCWWGG	2 cut(s)	1166, 1451
ErhI	CCWWGG	2 cut(s)	1166, 1451
FaeI	CATG	6 cut(s)	158, 241, 257, 505, 632, 1628
FatI	CATG	6 cut(s)	154, 237, 253, 501, 628, 1624
FauI	CCCGC	2 cut(s)	464, 529
FauNDI	CATATG	1 cut(s)	858
FblI	GTMKAC	1 cut(s)	432
Fnu4HI	GCNGC	8 cut(s)	213, 296, 332, 638, 695, 1304, 1374, 1420
FokI	GGATG	1 cut(s)	1012
Fsp4HI	GCNGC	8 cut(s)	213, 296, 332, 638, 695, 1304, 1374, 1420
FspBI	CTAG	4 cut(s)	957, 1011, 1118, 1317
FspI	TGCGCA	1 cut(s)	309
GlaI	GCGC	8 cut(s)	165, 309, 448, 470, 507, 570, 589, 816
GluI	GCNGC	8 cut(s)	213, 296, 332, 638, 695, 1304, 1374, 1420
GsaI	CCCAGC	1 cut(s)	1380
GsuI	CTGGAG	3 cut(s)	446, 870, 879
HaeII	RGCGCY	3 cut(s)	167, 572, 591
HaeIII	GGCC	7 cut(s)	513, 582, 945, 1172, 1281, 1381, 1450
HapII	CCGG	9 cut(s)	716, 724, 747, 996, 1041, 1097, 1173, 1224, 1264
HgaI	GACGC	1 cut(s)	280
HhaI	GCGC	8 cut(s)	166, 310, 449, 471, 508, 571, 590, 817
Hin1I	GRCGYC	1 cut(s)	561
Hin1II	CATG	6 cut(s)	158, 241, 257, 505, 632, 1628
Hin6I	GCGC	8 cut(s)	164, 308, 447, 469, 506, 569, 588, 815
HinP1I	GCGC	8 cut(s)	164, 308, 447, 469, 506, 569, 588, 815
HincII	GTYRAC	2 cut(s)	65, 963
HindII	GTYRAC	2 cut(s)	65, 963
HinfI	GANTC	6 cut(s)	100, 234, 794, 875, 1135, 1646
HpaII	CCGG	9 cut(s)	716, 724, 747, 996, 1041, 1097, 1173, 1224, 1264
HphI	GGTGA	5 cut(s)	175, 828, 925, 1076, 1358
Hpy166II	GTNNAC	9 cut(s)	65, 94, 433, 475, 611, 762, 963, 1083, 1473
Hpy188I	TCNGA	4 cut(s)	559, 777, 808, 1387
Hpy188III	TCNNGA	8 cut(s)	231, 238, 370, 593, 623, 987, 1317, 1460
Hpy8I	GTNNAC	9 cut(s)	65, 94, 433, 475, 611, 762, 963, 1083, 1473
Hpy99I	CGWCG	4 cut(s)	563, 856, 1076, 1358
HpyAV	CCTTC	8 cut(s)	78, 123, 196, 494, 547, 556, 852, 1652
HpyCH4III	ACNGT	3 cut(s)	852, 1404, 1431
HpyCH4IV	ACGT	9 cut(s)	9, 561, 663, 689, 1071, 1108, 1155, 1356, 1541
HpyCH4V	TGCA	2 cut(s)	257, 1361
HpyF10VI	GCNNNNNNNGC	5 cut(s)	271, 314, 328, 720, 853
HpyF3I	CTNAG	4 cut(s)	275, 327, 1088, 1365
HpySE526I	ACGT	9 cut(s)	9, 561, 663, 689, 1071, 1108, 1155, 1356, 1541
Hsp92I	GRCGYC	1 cut(s)	561
Hsp92II	CATG	6 cut(s)	158, 241, 257, 505, 632, 1628
HspAI	GCGC	8 cut(s)	164, 308, 447, 469, 506, 569, 588, 815
KroI	GCCGGC	1 cut(s)	1172
KroNI	GCCGGC	1 cut(s)	1174
Kzo9I	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
LguI	GCTCTTC	1 cut(s)	747
LmnI	GCTCC	1 cut(s)	500
Lsp1109I	GCAGC	5 cut(s)	224, 307, 624, 681, 1385
LweI	GCATC	3 cut(s)	326, 842, 990
MabI	ACCWGGT	2 cut(s)	732, 1060
MaeI	CTAG	4 cut(s)	957, 1011, 1118, 1317
MaeII	ACGT	9 cut(s)	9, 561, 663, 689, 1071, 1108, 1155, 1356, 1541
MaeIII	GTNAC	3 cut(s)	1092, 1148, 1600
MalI	GATC	8 cut(s)	302, 647, 660, 774, 991, 1030, 1276, 1458
MbiI	CCGCTC	1 cut(s)	1237
MboI	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
MboII	GAAGA	6 cut(s)	134, 191, 400, 764, 794, 1644
MhlI	GDGCHC	2 cut(s)	1114, 1402
MluCI	AATT	8 cut(s)	41, 226, 359, 1123, 1388, 1464, 1488, 1675
MlyI	GAGTC	3 cut(s)	94, 243, 803
MmeI	TCCRAC	3 cut(s)	582, 1284, 1386
MroNI	GCCGGC	1 cut(s)	1172
MseI	TTAA	5 cut(s)	1056, 1193, 1485, 1653, 1679
MspA1I	CMGCKG	3 cut(s)	524, 1376, 1436
MspI	CCGG	9 cut(s)	716, 724, 747, 996, 1041, 1097, 1173, 1224, 1264
MvaI	CCWGG	5 cut(s)	464, 584, 734, 869, 1062
MvnI	CGCG	3 cut(s)	471, 508, 1255
MwoI	GCNNNNNNNGC	5 cut(s)	271, 314, 328, 720, 853
NaeI	GCCGGC	1 cut(s)	1174
NciI	CCSGG	5 cut(s)	716, 725, 747, 997, 1224
NdeI	CATATG	1 cut(s)	858
NdeII	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
NgoMIV	GCCGGC	1 cut(s)	1172
NlaIII	CATG	6 cut(s)	158, 241, 257, 505, 632, 1628
NlaIV	GGNNCC	3 cut(s)	496, 738, 1337
NmeAIII	GCCGAG	1 cut(s)	558
NmuCI	GTSAC	1 cut(s)	1600
NsbI	TGCGCA	1 cut(s)	309
NspV	TTCGAA	1 cut(s)	487
PagI	TCATGA	1 cut(s)	237
PciSI	GCTCTTC	1 cut(s)	747
PdiI	GCCGGC	1 cut(s)	1174
PfeI	GAWTC	3 cut(s)	875, 1135, 1646
PinAI	ACCGGT	1 cut(s)	1263
PkrI	GCNGC	8 cut(s)	214, 297, 333, 639, 696, 1305, 1375, 1421
PleI	GAGTC	3 cut(s)	94, 242, 802
PpsI	GAGTC	3 cut(s)	94, 242, 802
Ppu21I	YACGTR	3 cut(s)	664, 1109, 1542
PsiI	TTATAA	1 cut(s)	14
Psp1406I	AACGTT	1 cut(s)	9
Psp6I	CCWGG	5 cut(s)	462, 582, 732, 867, 1060
PspEI	GGTNACC	1 cut(s)	1092
PspFI	CCCAGC	1 cut(s)	1376
PspGI	CCWGG	5 cut(s)	462, 582, 732, 867, 1060
PspN4I	GGNNCC	3 cut(s)	496, 738, 1337
PspPI	GGNCC	7 cut(s)	475, 944, 974, 1170, 1257, 1379, 1408
PsrI	GAACNNNNNNTAC	2 cut(s)	375, 407
PvuII	CAGCTG	2 cut(s)	1376, 1436
RsaI	GTAC	3 cut(s)	761, 1107, 1474
RsaNI	GTAC	3 cut(s)	760, 1106, 1473
SapI	GCTCTTC	1 cut(s)	747
SaqAI	TTAA	5 cut(s)	1056, 1193, 1485, 1653, 1679
SatI	GCNGC	8 cut(s)	213, 296, 332, 638, 695, 1304, 1374, 1420
Sau3AI	GATC	8 cut(s)	300, 645, 658, 772, 989, 1028, 1274, 1456
Sau96I	GGNCC	7 cut(s)	475, 944, 974, 1170, 1257, 1379, 1408
SchI	GAGTC	3 cut(s)	94, 243, 803
SduI	GDGCHC	2 cut(s)	1114, 1402
SexAI	ACCWGGT	2 cut(s)	732, 1060
SfaNI	GCATC	3 cut(s)	326, 842, 990
SfuI	TTCGAA	1 cut(s)	487
SinI	GGWCC	4 cut(s)	475, 974, 1257, 1408
SmlI	CTYRAG	3 cut(s)	346, 368, 572
SmoI	CTYRAG	3 cut(s)	346, 368, 572
SpeI	ACTAGT	1 cut(s)	1117
Sse9I	AATT	8 cut(s)	41, 226, 359, 1123, 1388, 1464, 1488, 1675
SspMI	CTAG	4 cut(s)	957, 1011, 1118, 1317
StyI	CCWWGG	2 cut(s)	1166, 1451
TaaI	ACNGT	3 cut(s)	852, 1404, 1431
TaiI	ACGT	9 cut(s)	12, 564, 666, 692, 1074, 1111, 1158, 1359, 1544
TaqI	TCGA	8 cut(s)	208, 487, 531, 707, 792, 986, 1037, 1074
TaqII	GACCGA	2 cut(s)	942, 972
TasI	AATT	8 cut(s)	41, 226, 359, 1123, 1388, 1464, 1488, 1675
TatI	WGTACW	1 cut(s)	1472
TauI	GCSGC	3 cut(s)	334, 1306, 1422
TfiI	GAWTC	3 cut(s)	875, 1135, 1646
Tru1I	TTAA	5 cut(s)	1056, 1193, 1485, 1653, 1679
Tru9I	TTAA	5 cut(s)	1056, 1193, 1485, 1653, 1679
TscAI	CASTG	5 cut(s)	310, 449, 817, 903, 1183
TseFI	GTSAC	1 cut(s)	1600
TseI	GCWGC	5 cut(s)	212, 295, 637, 694, 1373
Tsp45I	GTSAC	1 cut(s)	1600
TspGWI	ACGGA	2 cut(s)	50, 418
TspRI	CASTG	5 cut(s)	310, 449, 817, 903, 1183
VpaK11BI	GGWCC	4 cut(s)	475, 974, 1257, 1408
XapI	RAATTY	4 cut(s)	359, 1123, 1464, 1675
XbaI	TCTAGA	1 cut(s)	1316
XmiI	GTMKAC	1 cut(s)	432
XspI	CTAG	4 cut(s)	957, 1011, 1118, 1317
ZraI	GACGTC	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.