pycom15g34980

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0016862
Physical Location & Seq
Forward (+)
34880789 .. 34883513
2725 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2433 bp
ATGGAGGGCATTACTTCCCTCCACAAAACTTTACCCGAAACAGATAGAGGAGTGGATAATAAACACTCTCTCCCTCTCTCCCTCCCTCTGCACCTCCAGCAGCATGCAATTTCTTTGAAGAAAACCTCCCCAAGCCTTTCTATGGCTTCCTTGCCCTCAGTTGCTCTCAGTGGCACTCTCAAACTCGACCAAGAATTCCGAAAACACCCCACAAATTTTCTTCCTTCCGAAAAGAGCGCAAATGTTTCATATCCGAAAAGTCAGACAATCACCAATTCAGATCGAAGTTCGGAACTCCCCAAGTCTCTGGATTTCCGAGAAGCGCTTTTGATGATTAGAGAGGGGGATAAGGTTGAATCAACTCACTATGTCCCTGTCTTGCAAGAATGTATACACAGGAATTCGGCTTCAGAAGCGAAAGTTGTGCATGCCCACATCATAAAGACCGGAACCCACCAAGATTTGTTTGTCACAACATTCCTTGTCAATGTTTATGCAAAATGTAGAATCATGGAAAGTGCACGTAAAGTTTTTGACAATCTGCCTGGGAGGAACGTTGTTTCGTGGACAAGTTTGATAACGGGTTATGTTCACAATTCGCAGCCAGAAGTTGCCATTCGGGTTTTCAAGGAAATGCTGGAAGCCGGGGCTTATCCTACGAATTACACTCTAGGAATTGTTTTGAATGCTTCTTCTTCTTTGCAGTCCTTAAAATTAGGGAAGCAGTTGCATGGCTATATAATCAAATACCAGATCGATTTTGACACTAGTACCGGCAACTGTCTTTGCAGTTTATACTCGAAATGTGGAAGCTTGGAATCCAGTATTAAAGCGTTCAAGAAAATCGAGGAGAAAAATGTTATCTCGTGGACTGCAACCATATCAGCCTGTAGTGATAACGGTGATGCTGCAAGAGGTTTGAGATTTTTCACTGAGATGCTTTCCGAGGGCGTTGGACCTAATGAGTATACCCTAACCAATGTCTTGAGCTTGTGTTGTGTAATGCTGTCACTGAGTGTGGGGCAACAGGTTCACTCGTTAAGCATAAAACTTGGCTACGAATTGAACCTGCCAATCAAGAACGCTATCATGTATTTATACCTCAAATGTGGACAGATTAATGAGGCTCGAAAGTTGTTTAATGGGATGGAAGCTATCAGCTTGGTTACATGGAATGCAATGATTGCAGGCCATGCACAAATTATGGATCTTGCACAGGACGATGTTTCAGCATACCAAAGCGGAACTGAAGCACTCAACATTTTCTTGAAACTGAACCGTTCAGGCTTGCAACCGGATTTGTTCACCTTCTCGAGTATCTTAGCTATATGTAGTGGTTTAGTGGCCTTAGAACAGGGAGAACAGATTCATGCTCAGACCATTAAGACGGGGTTTCTCGAAGATATGGTAGTAGGCACTGCCCTAGTCAATATGTACAACAAATGTGGCAGTATTGAGAAAGCAAGTAAAGCTTTTGTGGAGATGTCTACGAGAACCTTGATATCGTGGACAACTATGATTGCAGGTTTTGCACAGCATGGCCGGACTCAGCAAGCACTGCAGCTCTTCGAGGATATGAGAATTGCAGGAGTAAGGCCGAATCAGATTACTTTCGTGAGTGTTCTCTCGGCCTGTAGCCATGCTGGGATGGTCAACGAAGCTCTCGGTTACTTTGAGATGATGAAAAAAGACTATAAGATTAAGCCTGTGCTGGATCATTTTGCCTGCTTGATTGATATGTACGTGAGGAAGGGTCGGTTAGAGGAAGCGATTGATCTGGCAAAGAAAATGGATCCTCAAGCGAACGAGTTTATATGGTCGATCTTGGTTGCAGGGTGTAGAAGACATGGGAATTTAGAATTGGGATTTTATGCTGCTGAAAGGTTGCTCAAGCCAAAACCAAAAGATACAGAAACTTACACATTGTTGTTGAATTTGTACCACTCTGCAGGAAGATTGAAGGACGTTGCTAAGGTGAGAAAGATGATGAAAGAGGAGAAGCTTGAAAAATTAAGGGACTGGAGCTGGATTAGCATTAGAGACAAGATCTATTCATTTCAACCGAATGATAATTTACATCCTTACAGTGCAGACACACAAAAATTCGTACAAAGTTTGATTGATCGAGTCAAGAGTCTTGGATATCAGTCACTAGAAATTTTGGAAGTAACCAATGAGGAGGATGAAGAGCAGACTTCGATTCCAACCGCTTATCATAGTGAAAAGTTAGCGATTGCTTTTGGATTGTTGAACATGCCAAATGCTGCACCAATTCGGGTCATCAAGAGCATTGTTATGTGCAGAGATTGCCATAATTTTGTTAAGTTTGTGTCATTACTGACTGGTAGGGAGATGATCATTCGAGACAGCAAGCGCCTCCACAGATTTGTGAATGGAACATGTTCATGTGGGGACTTCGGAGGTGCTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

811

Amino Acids

90.48

Weight (kDa)

8.36

Isoelectric Point (pI)

33.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 184 - 230 5.7e-11 PPR repeat family
PPR PF01535 187 - 216 1.1e-06 PPR repeat
PPR_2 PF13041 285 - 333 6.9e-08 PPR repeat family
PPR_2 PF13041 500 - 546 1.6e-11 PPR repeat family
PPR PF01535 501 - 530 1.2e-06 PPR repeat
PPR_long PF17177 516 - 599 1.3e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 522 - 582 8.8e-08 Pentatricopeptide repeat domain
E_motif PF20431 616 - 677 1e-12 E motif
DYW_deaminase PF14432 723 - 806 3e-27 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016862)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g33990
malus_domestica MD15G1390700.v1.1
prunus_persica Prupe.1G539500_v2.0.a1
pyrus_communis pycom15g34980
rosa_chinensis RchiOBHm_Chr7g0233371
rosa_laevigata RLG00000001274
rosa_multiflora Rmu_sc0008806.1_g000005
rosa_roxburghii Rroxscaffold_3G00227330
rosa_rugosa Rorug07G0280500
rosa_samantha Rh7BG409100 Rh7CG455500
rosa_wichuraiana Rw0G022470 Rw7G035890 Rw7G035930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1077, 1514
AccI GTMKAC 3 cut(s) 391, 968, 1487
AciI CCGC 2 cut(s) 1242, 2208
AclI AACGTT 1 cut(s) 555
AclWI GGATC 4 cut(s) 1215, 1722, 1787, 1800
AcoI YGGCCR 1 cut(s) 1540
AcsI RAATTY 7 cut(s) 194, 214, 400, 1852, 1933, 2102, 2157
AcuI CTGAAG 2 cut(s) 393, 1269
AdeI CACNNNGTG 1 cut(s) 1016
AfaI GTAC 5 cut(s) 772, 1436, 1742, 1940, 2109
AfeI AGCGCT 1 cut(s) 324
AfiI CCNNNNNNNGG 1 cut(s) 142
AflIII ACRYGT 1 cut(s) 2399
AhlI ACTAGT 1 cut(s) 767
AjnI CCWGG 1 cut(s) 544
AjuI GAANNNNNNNTTGG 2 cut(s) 1844, 1876
Alw21I GWGCWC 1 cut(s) 523
Alw26I GTCTC 3 cut(s) 309, 2034, 2358
Alw44I GTGCAC 1 cut(s) 519
AlwI GGATC 4 cut(s) 1215, 1722, 1787, 1800
Ama87I CYCGRG 1 cut(s) 1312
Aor51HI AGCGCT 1 cut(s) 324
AoxI GGCC 5 cut(s) 1189, 1344, 1540, 1595, 1629
ApaLI GTGCAC 1 cut(s) 519
ApeKI GCWGC 6 cut(s) 100, 601, 908, 1561, 1874, 2264
ApoI RAATTY 7 cut(s) 194, 214, 400, 1852, 1933, 2102, 2157
AseI ATTAAT 1 cut(s) 1119
Asp700I GAANNNNTTC 2 cut(s) 1365, 2401
AspLEI GCGC 3 cut(s) 239, 325, 2376
AspS9I GGNCC 1 cut(s) 956
AsuC2I CCSGG 1 cut(s) 646
AsuHPI GGTGA 4 cut(s) 262, 914, 1297, 1987
AvaI CYCGRG 1 cut(s) 1312
AvaII GGWCC 1 cut(s) 956
BaeGI GKGCMC 1 cut(s) 523
BaeI ACNNNNGTAYC 2 cut(s) 754, 787
BamHI GGATCC 1 cut(s) 1792
BauI CACGAG 1 cut(s) 865
BbsI GAAGAC 1 cut(s) 1849
Bbv12I GWGCWC 1 cut(s) 523
BbvI GCAGC 6 cut(s) 112, 613, 895, 1573, 1861, 2251
BccI CCATC 2 cut(s) 1141, 1642
BcgI CGANNNNNNTGC 2 cut(s) 406, 440
BciT130I CCWGG 1 cut(s) 546
BclI TGATCA 1 cut(s) 2355
BcnI CCSGG 1 cut(s) 646
BcoDI GTCTC 3 cut(s) 309, 2034, 2358
BcuI ACTAGT 1 cut(s) 767
BfaI CTAG 4 cut(s) 671, 768, 1424, 2153
BfmI CTRYAG 4 cut(s) 889, 1559, 1633, 1947
BfoI RGCGCY 2 cut(s) 326, 2377
BfuAI ACCTGC 2 cut(s) 1077, 1514
BglII AGATCT 1 cut(s) 2046
BisI GCNGC 6 cut(s) 101, 602, 909, 1562, 1875, 2265
BlsI GCNGC 6 cut(s) 102, 603, 910, 1563, 1876, 2266
Bme1390I CCNGG 2 cut(s) 546, 646
Bme18I GGWCC 1 cut(s) 956
BmeT110I CYCGRG 1 cut(s) 1312
BmgT120I GGNCC 1 cut(s) 956
BmiI GGNNCC 2 cut(s) 451, 1794
BmrFI CCNGG 2 cut(s) 546, 646
BmsI GCATC 2 cut(s) 895, 927
BpiI GAAGAC 1 cut(s) 1849
BpmI CTGGAG 2 cut(s) 80, 2041
Bpu10I CCTNAGC 1 cut(s) 1971
BpuEI CTTGAG 3 cut(s) 1006, 1782, 1874
BpuMI CCSGG 1 cut(s) 646
Bsa29I ATCGAT 1 cut(s) 756
BsaAI YACGTR 2 cut(s) 524, 1744
BsaJI CCNNGG 3 cut(s) 545, 645, 945
BsaWI WCCGGW 2 cut(s) 446, 1294
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 1 cut(s) 142
Bse118I RCCGGY 1 cut(s) 773
Bse1I ACTGG 3 cut(s) 822, 2024, 2347
Bse3DI GCAATG 1 cut(s) 1185
BseBI CCWGG 1 cut(s) 546
BseCI ATCGAT 1 cut(s) 756
BseDI CCNNGG 3 cut(s) 545, 645, 945
BseGI GGATG 4 cut(s) 1152, 1653, 2077, 2188
BseLI CCNNNNNNNGG 1 cut(s) 142
BseMI GCAATG 1 cut(s) 1185
BseMII CTCAG 6 cut(s) 171, 181, 924, 1004, 1388, 1562
BseNI ACTGG 3 cut(s) 822, 2024, 2347
BseRI GAGGAG 4 cut(s) 63, 863, 2009, 2192
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 6 cut(s) 112, 613, 895, 1573, 1861, 2251
BseYI CCCAGC 1 cut(s) 1643
BsgI GTGCAG 4 cut(s) 74, 2109, 2250, 2320
BshFI GGCC 5 cut(s) 1191, 1346, 1542, 1597, 1631
BshVI ATCGAT 1 cut(s) 756
BsiHKAI GWGCWC 1 cut(s) 523
BsiHKCI CYCGRG 1 cut(s) 1312
BsiSI CCGG 5 cut(s) 447, 645, 774, 1295, 1543
BslFI GGGAC 3 cut(s) 356, 2030, 2426
BslI CCNNNNNNNGG 1 cut(s) 142
BsmAI GTCTC 3 cut(s) 309, 2034, 2358
BsmFI GGGAC 3 cut(s) 356, 2030, 2426
BsmI GAATGC 2 cut(s) 691, 1180
BsnI GGCC 5 cut(s) 1191, 1346, 1542, 1597, 1631
BsoBI CYCGRG 1 cut(s) 1312
Bsp1286I GDGCHC 1 cut(s) 523
Bsp1407I TGTACA 1 cut(s) 1434
BspACI CCGC 2 cut(s) 1242, 2208
BspANI GGCC 5 cut(s) 1191, 1346, 1542, 1597, 1631
BspCNI CTCAG 6 cut(s) 170, 180, 925, 1005, 1387, 1561
BspDI ATCGAT 1 cut(s) 756
BspLI GGNNCC 2 cut(s) 451, 1794
BspMAI CTGCAG 2 cut(s) 1563, 1951
BspMI ACCTGC 2 cut(s) 1077, 1514
BspPI GGATC 4 cut(s) 1215, 1722, 1787, 1800
BspQI GCTCTTC 2 cut(s) 1571, 2181
BsrDI GCAATG 1 cut(s) 1185
BsrFI RCCGGY 1 cut(s) 773
BsrGI TGTACA 1 cut(s) 1434
BsrI ACTGG 3 cut(s) 822, 2024, 2347
BssAI RCCGGY 1 cut(s) 773
BssECI CCNNGG 3 cut(s) 545, 645, 945
BssNAI GTATAC 2 cut(s) 392, 969
BssSI CACGAG 1 cut(s) 865
Bst1107I GTATAC 2 cut(s) 392, 969
Bst2BI CACGAG 1 cut(s) 865
Bst2UI CCWGG 1 cut(s) 546
Bst4CI ACNGT 4 cut(s) 782, 902, 1280, 2087
Bst6I CTCTTC 2 cut(s) 1571, 2181
BstAPI GCANNNNNTGC 5 cut(s) 1184, 1193, 1529, 1558, 2307
BstAUI TGTACA 1 cut(s) 1434
BstBAI YACGTR 2 cut(s) 524, 1744
BstC8I GCNNGC 7 cut(s) 105, 429, 1189, 1289, 1554, 1726, 2372
BstDEI CTNAG 9 cut(s) 157, 167, 933, 1013, 1321, 1348, 1374, 1548, 1971
BstF5I GGATG 4 cut(s) 1152, 1653, 2077, 2188
BstH2I RGCGCY 2 cut(s) 326, 2377
BstHHI GCGC 3 cut(s) 239, 325, 2376
BstMAI GTCTC 3 cut(s) 309, 2034, 2358
BstMWI GCNNNNNNNGC 9 cut(s) 97, 413, 1184, 1193, 1469, 1529, 1558, 2031, 2307
BstNI CCWGG 1 cut(s) 546
BstNSI RCATGY 4 cut(s) 107, 431, 2257, 2403
BstSCI CCNGG 2 cut(s) 544, 644
BstSFI CTRYAG 4 cut(s) 889, 1559, 1633, 1947
BstSLI GKGCMC 1 cut(s) 523
BstV1I GCAGC 6 cut(s) 112, 613, 895, 1573, 1861, 2251
BstV2I GAAGAC 1 cut(s) 1849
BstX2I RGATCY 3 cut(s) 1207, 1792, 2046
BstXI CCANNNNNNTGG 1 cut(s) 307
BstYI RGATCY 3 cut(s) 1207, 1792, 2046
BstZ17I GTATAC 2 cut(s) 392, 969
Bsu15I ATCGAT 1 cut(s) 756
BsuRI GGCC 5 cut(s) 1191, 1346, 1542, 1597, 1631
BsuTUI ATCGAT 1 cut(s) 756
BtsCI GGATG 4 cut(s) 1152, 1653, 2077, 2188
BtsI GCAGTG 2 cut(s) 1416, 1556
BtsIMutI CAGTG 6 cut(s) 175, 930, 1010, 1416, 1556, 2092
BveI ACCTGC 2 cut(s) 1077, 1514
Cac8I GCNNGC 7 cut(s) 105, 429, 1189, 1289, 1554, 1726, 2372
CfoI GCGC 3 cut(s) 239, 325, 2376
Cfr10I RCCGGY 1 cut(s) 773
Cfr13I GGNCC 1 cut(s) 956
ClaI ATCGAT 1 cut(s) 756
Csp6I GTAC 5 cut(s) 771, 1435, 1741, 1939, 2108
CspCI CAANNNNNGTGG 2 cut(s) 1426, 1461
CviQI GTAC 5 cut(s) 771, 1435, 1741, 1939, 2108
DdeI CTNAG 9 cut(s) 157, 167, 933, 1013, 1321, 1348, 1374, 1548, 1971
DraIII CACNNNGTG 1 cut(s) 1016
EaeI YGGCCR 1 cut(s) 1540
Eam1104I CTCTTC 2 cut(s) 1571, 2181
EarI CTCTTC 2 cut(s) 1571, 2181
Eco32I GATATC 2 cut(s) 1503, 2144
Eco47I GGWCC 1 cut(s) 956
Eco47III AGCGCT 1 cut(s) 324
Eco57I CTGAAG 2 cut(s) 393, 1269
Eco88I CYCGRG 1 cut(s) 1312
EcoRI GAATTC 2 cut(s) 194, 400
EcoRII CCWGG 1 cut(s) 544
EcoRV GATATC 2 cut(s) 1503, 2144
FalI AAGNNNNNCTT 2 cut(s) 1456, 1488
FaqI GGGAC 3 cut(s) 356, 2030, 2426
FbaI TGATCA 1 cut(s) 2355
FblI GTMKAC 3 cut(s) 391, 968, 1487
Fnu4HI GCNGC 6 cut(s) 101, 602, 909, 1562, 1875, 2265
FokI GGATG 4 cut(s) 1159, 1660, 2064, 2195
Fsp4HI GCNGC 6 cut(s) 101, 602, 909, 1562, 1875, 2265
FspBI CTAG 4 cut(s) 671, 768, 1424, 2153
GlaI GCGC 3 cut(s) 238, 324, 2375
GluI GCNGC 6 cut(s) 101, 602, 909, 1562, 1875, 2265
GsaI CCCAGC 1 cut(s) 1647
GsuI CTGGAG 2 cut(s) 80, 2041
HaeII RGCGCY 2 cut(s) 326, 2377
HaeIII GGCC 5 cut(s) 1191, 1346, 1542, 1597, 1631
HapII CCGG 5 cut(s) 447, 645, 774, 1295, 1543
HhaI GCGC 3 cut(s) 239, 325, 2376
Hin6I GCGC 3 cut(s) 237, 323, 2374
HinP1I GCGC 3 cut(s) 237, 323, 2374
HincII GTYRAC 1 cut(s) 1654
HindII GTYRAC 1 cut(s) 1654
HindIII AAGCTT 3 cut(s) 811, 1470, 2000
HinfI GANTC 9 cut(s) 356, 507, 818, 1366, 1546, 1600, 2127, 2134, 2200
HpaII CCGG 5 cut(s) 447, 645, 774, 1295, 1543
HphI GGTGA 4 cut(s) 262, 914, 1297, 1987
HpyAV CCTTC 4 cut(s) 234, 1318, 1744, 1954
HpyCH4III ACNGT 4 cut(s) 782, 902, 1280, 2087
HpyCH4IV ACGT 4 cut(s) 523, 555, 1743, 1965
HpyF10VI GCNNNNNNNGC 9 cut(s) 97, 413, 1184, 1193, 1469, 1529, 1558, 2031, 2307
HpyF3I CTNAG 9 cut(s) 157, 167, 933, 1013, 1321, 1348, 1374, 1548, 1971
HpySE526I ACGT 4 cut(s) 523, 555, 1743, 1965
HspAI GCGC 3 cut(s) 237, 323, 2374
Ksp22I TGATCA 1 cut(s) 2355
LguI GCTCTTC 2 cut(s) 1571, 2181
LmnI GCTCC 1 cut(s) 2022
Lsp1109I GCAGC 6 cut(s) 112, 613, 895, 1573, 1861, 2251
LweI GCATC 2 cut(s) 895, 927
MaeI CTAG 4 cut(s) 671, 768, 1424, 2153
MaeII ACGT 4 cut(s) 523, 555, 1743, 1965
MaeIII GTNAC 6 cut(s) 469, 1008, 1165, 1667, 2148, 2167
MboII GAAGA 9 cut(s) 130, 212, 684, 687, 1412, 1558, 1854, 1965, 2198
MflI RGATCY 3 cut(s) 1207, 1792, 2046
MhlI GDGCHC 1 cut(s) 523
MlyI GAGTC 3 cut(s) 1540, 2136, 2143
MmeI TCCRAC 2 cut(s) 934, 2228
MroXI GAANNNNTTC 2 cut(s) 1365, 2401
MseI TTAA 9 cut(s) 710, 828, 1040, 1119, 1140, 1383, 1701, 2012, 2322
MslI CAYNNNNRTG 3 cut(s) 935, 2294, 2404
MspI CCGG 5 cut(s) 447, 645, 774, 1295, 1543
MspR9I CCNGG 2 cut(s) 546, 646
Mva1269I GAATGC 2 cut(s) 691, 1180
MvaI CCWGG 1 cut(s) 546
MwoI GCNNNNNNNGC 9 cut(s) 97, 413, 1184, 1193, 1469, 1529, 1558, 2031, 2307
NciI CCSGG 1 cut(s) 646
NlaIV GGNNCC 2 cut(s) 451, 1794
NmeAIII GCCGAG 1 cut(s) 1607
NmuCI GTSAC 3 cut(s) 469, 1008, 2148
NspI RCATGY 4 cut(s) 107, 431, 2257, 2403
PaeI GCATGC 2 cut(s) 107, 431
PaeR7I CTCGAG 1 cut(s) 1312
PciI ACATGT 1 cut(s) 2399
PciSI GCTCTTC 2 cut(s) 1571, 2181
PctI GAATGC 2 cut(s) 691, 1180
PdmI GAANNNNTTC 2 cut(s) 1365, 2401
PfeI GAWTC 6 cut(s) 356, 507, 818, 1366, 1600, 2200
PkrI GCNGC 6 cut(s) 102, 603, 910, 1563, 1876, 2266
PleI GAGTC 3 cut(s) 1540, 2135, 2142
PpsI GAGTC 3 cut(s) 1540, 2135, 2142
Ppu21I YACGTR 2 cut(s) 524, 1744
PscI ACATGT 1 cut(s) 2399
PshBI ATTAAT 1 cut(s) 1119
Psp1406I AACGTT 1 cut(s) 555
Psp6I CCWGG 1 cut(s) 544
PspFI CCCAGC 1 cut(s) 1643
PspGI CCWGG 1 cut(s) 544
PspN4I GGNNCC 2 cut(s) 451, 1794
PspPI GGNCC 1 cut(s) 956
PstI CTGCAG 2 cut(s) 1563, 1951
PsuI RGATCY 3 cut(s) 1207, 1792, 2046
RsaI GTAC 5 cut(s) 772, 1436, 1742, 1940, 2109
RsaNI GTAC 5 cut(s) 771, 1435, 1741, 1939, 2108
RseI CAYNNNNRTG 3 cut(s) 935, 2294, 2404
SapI GCTCTTC 2 cut(s) 1571, 2181
SaqAI TTAA 9 cut(s) 710, 828, 1040, 1119, 1140, 1383, 1701, 2012, 2322
SatI GCNGC 6 cut(s) 101, 602, 909, 1562, 1875, 2265
Sau96I GGNCC 1 cut(s) 956
SchI GAGTC 3 cut(s) 1540, 2136, 2143
ScrFI CCNGG 2 cut(s) 546, 646
SduI GDGCHC 1 cut(s) 523
SfaNI GCATC 2 cut(s) 895, 927
SfcI CTRYAG 4 cut(s) 889, 1559, 1633, 1947
Sfr274I CTCGAG 1 cut(s) 1312
SinI GGWCC 1 cut(s) 956
SlaI CTCGAG 1 cut(s) 1312
SmiMI CAYNNNNRTG 3 cut(s) 935, 2294, 2404
SmlI CTYRAG 4 cut(s) 985, 1312, 1797, 1889
SmoI CTYRAG 4 cut(s) 985, 1312, 1797, 1889
SpeI ACTAGT 1 cut(s) 767
SphI GCATGC 2 cut(s) 107, 431
SsiI CCGC 2 cut(s) 1242, 2208
SspMI CTAG 4 cut(s) 671, 768, 1424, 2153
StyD4I CCNGG 2 cut(s) 544, 644
TaaI ACNGT 4 cut(s) 782, 902, 1280, 2087
TaiI ACGT 4 cut(s) 526, 558, 1746, 1968
TatI WGTACW 1 cut(s) 1434
TfiI GAWTC 6 cut(s) 356, 507, 818, 1366, 1600, 2200
Tru1I TTAA 9 cut(s) 710, 828, 1040, 1119, 1140, 1383, 1701, 2012, 2322
Tru9I TTAA 9 cut(s) 710, 828, 1040, 1119, 1140, 1383, 1701, 2012, 2322
TscAI CASTG 6 cut(s) 175, 937, 1017, 1423, 1563, 2092
TseFI GTSAC 3 cut(s) 469, 1008, 2148
TseI GCWGC 6 cut(s) 100, 601, 908, 1561, 1874, 2264
Tsp45I GTSAC 3 cut(s) 469, 1008, 2148
TspDTI ATGAA 7 cut(s) 237, 1358, 1697, 2003, 2043, 2199, 2394
TspRI CASTG 6 cut(s) 175, 937, 1017, 1423, 1563, 2092
VneI GTGCAC 1 cut(s) 519
VpaK11BI GGWCC 1 cut(s) 956
VspI ATTAAT 1 cut(s) 1119
XapI RAATTY 7 cut(s) 194, 214, 400, 1852, 1933, 2102, 2157
XceI RCATGY 4 cut(s) 107, 431, 2257, 2403
XhoI CTCGAG 1 cut(s) 1312
XmiI GTMKAC 3 cut(s) 391, 968, 1487
XmnI GAANNNNTTC 2 cut(s) 1365, 2401
XspI CTAG 4 cut(s) 671, 768, 1424, 2153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.