pycom16g01700

Protein VAC14 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0012295
Physical Location & Seq
Forward (+)
1046509 .. 1052634
6126 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2121 bp
ATGGCCGACGCTCTCTTGGTGATTCCCGCGGGGGTGCTCCGCAACCTCGCGGACAAGCTCTACGAGAAGCGCAAGAATGCCGCACTTGAGGTTGAGGGAATAGTGAAACAGCTCACGACGGCTGGGGATCACGATAAGATTACGGCTGTGATCAATTTGCTCACTACGGAATTCACTTACTCGCCGCAAGCGAATCACCGGAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGACCAGTGAAGCGGCTCAGCATCTTGAGCAAATTGTGCCACCTGTGCTTAATTCCTTTTCGGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCGCTATATAACATTGCAAAGGTTGTAAGGGGAGATTTTATCATATTCTTTAATCAGATATTTGATGCCTTGTGTAAGCTTTCAGCAGACTCGGATGCTAATGTACAAAGTGCTGCTCATCTTTTAGATCGGCTTGTAAAGCAGGATATTGTTACTGAAAGTGATCAATTCAGCATTGAAGAATTTATTCCACTGTTGAGGGAGCGTATGAATGTCCTGAATCCCTATGTTCGTCAGTTTTTGGTTGGATGGATCACTGTCTTAGACAGTGTTCCAGATATTGACATGCTGGGATTTCTTCCTGATTTTCTTGATGGCTTGTTCAATATGTTAAGTGATTCAAGCCATGAGATTAGACAACAAGCTGATTCAGCACTTTCAGAGTTTCTCCAAGAGATCAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTACAGAGGGCTGCTTCACCGGATGAATTTACTCGGTTAACAGCTATCACATGGATAAATGAATTTGTAAAACTTGGTGGGGACCAGCTTGTTCCCTATTATGCTGATATTCTGGGAGCGATTTTACCCTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAATGAGGAGATTCGTGCCATTAAGGCTGATCCAGCTGAAGGATTTGACGTTGGAGCAATCCTCTCTATTGCAAGGAGGCAATTATCTAGTGAATGGGAGGCTACTAGAATCGAAGCACTGCACTGGATTTCAAACCTTTTAAACAGACATCGCGCTGAGGTTCTAACTTTTCTGAACGACATATTTGACACCCTTTTGGAAGCACTCTCAGACGCTTCTGATCAGGTGGTTCTCTTGGTCCTAGAAGTTCATGCATGCATAGCAAAAGATCCACAACACTTCCACCAGCTTGTTGTGTTCCTTGTGCATAATTTTCATGCTGAAAGGGTCTACCGAGAACTGTCTACTATACTAGAAGCAGAGTCAGACCTGGATTTTGCATCTGTTATGGTTCAGGCTTTGAACTTGATTTTACTTACATCATCCGAGTTGGCTGAGCTTCGAGATCTATCGAAAAGATCACTTGTGAATCCTTCTGGGAAGGACTTATTTGTTTCCTTATATGCTTCATGGTGCCACTCACCCATGGCAATTATAAGCCTCTGCTTATTAGCTCAGACGTATCAGCATGCGAGTACTGTGATTCAGTCTCTGGTGGAGGAAGATATTAATGTCAAGTTTTTGGTCCAGCTGGATAAATTGATTCGGTTACTAGAAACTCCAATCTTTGCGTATCTTAGATTACAGCTTCTTGAACCTGGAAGACATGTGTGGTTGTTAAAAACCTTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAAATTCTACGGACGCGTTTAAAAACTGTCCCTTCATACGCATTCAACGGTGAGCAACTCAGACGAACTTCTTCAGGGAATCCCCATCAGATTCTACACCACATGCCAAGTGGTTCGCAGATCCTTGAAGATGGGGACATAAACCAGGACAGTAAGAGTTCTCATAATGGAATAAACTTTGCTTTAAGACTACGGCAGTTTGAGCAAATGCAGCAGCAACATCGTCAGCATGCAAAAGTGCAGGCACAATCACACACAACTTCCACAGCTTCTTCAGCACCAAAGGATGTGCAAAGACCTGAAGAACAAAGCCATATCGGATCGCCTTCATCAGATGTGAATAGGCTTCCTTCCAGATCTCGGAGGGCCCCAGGGCAGTTACAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05166 ko05203 map05166 map05203
Pfam Domains
Protein Families
Vac14_Fab1_bd Vac14_Fig4_bd

Protein Analysis

707

Amino Acids

79.23

Weight (kDa)

5.56

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOR1L1_N PF24714 15 - 241 3.6e-06 TORTIFOLIA1 N-terminal
Vac14_Fab1_bd PF12755 65 - 161 1.9e-40 Vacuolar 14 Fab1-binding region
HEAT_EF3_N PF24987 233 - 396 3.6e-09 EF3 N-terminal HEAT repeat
Vac14_Fig4_bd PF11916 420 - 587 5.4e-64 Vacuolar protein 14 C-terminal Fig4p binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012295)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01690 AT2G01690
fragaria_vesca FvH4_4g33570 FvH4_4g33570
malus_domestica MD13G1020500.v1.1 MD16G1018900.v1.1
prunus_persica Prupe.1G333200_v2.0.a1
pyrus_communis pycom13g01730 pycom16g01700
rosa_chinensis RchiOBHm_Chr4g0443071
rosa_laevigata RLG00000005956
rosa_multiflora Rmu_sc0008069.1_g000004
rosa_roxburghii Rroxscaffold_5G00383700
rosa_rugosa Rorug04G0344200 Rorug04G0344200
rosa_samantha Rh4BG410000 Rh4CG425500 Rh4DG404900
rosa_wichuraiana Rw4G034340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1496, 2119
AccB1I GGYRCC 1 cut(s) 1473
AccI GTMKAC 2 cut(s) 1290, 1304
AccII CGCG 4 cut(s) 29, 50, 1113, 1747
AciI CCGC 8 cut(s) 27, 29, 40, 50, 81, 185, 254, 1725
AclWI GGATC 6 cut(s) 135, 599, 983, 1223, 1846, 2059
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 5 cut(s) 170, 521, 809, 845, 1734
AcuI CTGAAG 4 cut(s) 1017, 1788, 1989, 2052
AfaI GTAC 3 cut(s) 444, 786, 1537
AfeI AGCGCT 1 cut(s) 342
AfiI CCNNNNNNNGG 2 cut(s) 998, 2091
AflIII ACRYGT 2 cut(s) 1666, 1745
AgsI TTSAA 9 cut(s) 518, 664, 681, 1092, 1363, 1655, 1732, 1777, 1859
AjnI CCWGG 4 cut(s) 1329, 1657, 1875, 2101
Alw21I GWGCWC 1 cut(s) 39
Alw26I GTCTC 1 cut(s) 1554
AlwI GGATC 6 cut(s) 135, 599, 983, 1223, 1846, 2059
AlwNI CAGNNNCTG 1 cut(s) 1552
Aor51HI AGCGCT 1 cut(s) 342
AoxI GGCC 2 cut(s) 3, 2097
ApaI GGGCCC 1 cut(s) 2101
ApeKI GCWGC 6 cut(s) 224, 227, 452, 794, 1942, 1945
ApoI RAATTY 5 cut(s) 170, 521, 809, 845, 1734
ArsI GACNNNNNNTTYG 2 cut(s) 1319, 1351
AseI ATTAAT 1 cut(s) 1569
Asp700I GAANNNNTTC 2 cut(s) 525, 1801
AspLEI GCGC 3 cut(s) 72, 343, 1115
AspS9I GGNCC 6 cut(s) 304, 865, 1198, 1585, 2097, 2098
AsuHPI GGTGA 5 cut(s) 31, 188, 792, 1473, 1793
AvaII GGWCC 4 cut(s) 304, 865, 1198, 1585
BaeGI GKGCMC 1 cut(s) 2101
BanI GGYRCC 1 cut(s) 1473
BanII GRGCYC 1 cut(s) 2101
BauI CACGAG 1 cut(s) 951
BbsI GAAGAC 2 cut(s) 1669, 1688
Bbv12I GWGCWC 1 cut(s) 39
BbvCI CCTCAGC 2 cut(s) 1116, 1713
BbvI GCAGC 6 cut(s) 211, 214, 439, 781, 1954, 1957
BccI CCATC 5 cut(s) 582, 647, 757, 1824, 1856
BceAI ACGGC 3 cut(s) 135, 159, 1940
BcgI CGANNNNNNTGC 2 cut(s) 1934, 1968
BciT130I CCWGG 4 cut(s) 1331, 1659, 1877, 2103
BclI TGATCA 3 cut(s) 150, 502, 1180
BcoDI GTCTC 1 cut(s) 1554
BfaI CTAG 5 cut(s) 1047, 1065, 1202, 1313, 1613
BfmI CTRYAG 1 cut(s) 753
BfoI RGCGCY 1 cut(s) 344
BglI GCCNNNNNGGC 1 cut(s) 983
BglII AGATCT 2 cut(s) 1405, 2087
BlpI GCTNAGC 2 cut(s) 258, 1395
BmcAI AGTACT 1 cut(s) 1537
Bme1390I CCNGG 4 cut(s) 1331, 1659, 1877, 2103
Bme18I GGWCC 4 cut(s) 304, 865, 1198, 1585
BmgT120I GGNCC 6 cut(s) 304, 865, 1198, 1585, 2097, 2098
BmiI GGNNCC 4 cut(s) 866, 1475, 2099, 2100
BmrFI CCNGG 4 cut(s) 1331, 1659, 1877, 2103
BmsI GCATC 4 cut(s) 271, 394, 424, 1349
BpiI GAAGAC 2 cut(s) 1669, 1688
BplI GAGNNNNNCTC 2 cut(s) 1005, 1037
Bpu10I CCTNAGC 2 cut(s) 1116, 1713
Bpu1102I GCTNAGC 2 cut(s) 258, 1395
BpuEI CTTGAG 2 cut(s) 107, 287
BsaJI CCNNGG 4 cut(s) 27, 1485, 2101, 2102
BsaWI WCCGGW 2 cut(s) 198, 802
Bsc4I CCNNNNNNNGG 2 cut(s) 998, 2091
Bse1I ACTGG 3 cut(s) 246, 786, 1088
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 4 cut(s) 1331, 1659, 1877, 2103
BseDI CCNNGG 4 cut(s) 27, 1485, 2101, 2102
BseGI GGATG 5 cut(s) 439, 593, 811, 1382, 2023
BseLI CCNNNNNNNGG 2 cut(s) 998, 2091
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 7 cut(s) 272, 1107, 1182, 1386, 1529, 1727, 1804
BseNI ACTGG 3 cut(s) 246, 786, 1088
BseRI GAGGAG 1 cut(s) 980
BseSI GKGCMC 1 cut(s) 2101
BseXI GCAGC 6 cut(s) 211, 214, 439, 781, 1954, 1957
BseYI CCCAGC 2 cut(s) 122, 628
BsgI GTGCAG 2 cut(s) 1064, 1991
Bsh1236I CGCG 4 cut(s) 29, 50, 1113, 1747
BshFI GGCC 2 cut(s) 5, 2099
BshNI GGYRCC 1 cut(s) 1473
BsiHKAI GWGCWC 1 cut(s) 39
BsiSI CCGG 2 cut(s) 199, 803
BslFI GGGAC 3 cut(s) 878, 1745, 1880
BslI CCNNNNNNNGG 2 cut(s) 998, 2091
BsmAI GTCTC 1 cut(s) 1554
BsmFI GGGAC 3 cut(s) 878, 1745, 1880
BsmI GAATGC 2 cut(s) 82, 1772
BsnI GGCC 2 cut(s) 5, 2099
Bsp120I GGGCCC 1 cut(s) 2097
Bsp1286I GDGCHC 2 cut(s) 39, 2101
Bsp1407I TGTACA 1 cut(s) 442
Bsp1720I GCTNAGC 2 cut(s) 258, 1395
Bsp19I CCATGG 1 cut(s) 1485
BspACI CCGC 8 cut(s) 27, 29, 40, 50, 81, 185, 254, 1725
BspANI GGCC 2 cut(s) 5, 2099
BspCNI CTCAG 7 cut(s) 271, 1108, 1181, 1387, 1528, 1726, 1803
BspFNI CGCG 4 cut(s) 29, 50, 1113, 1747
BspLI GGNNCC 4 cut(s) 866, 1475, 2099, 2100
BspPI GGATC 6 cut(s) 135, 599, 983, 1223, 1846, 2059
BspT107I GGYRCC 1 cut(s) 1473
BsrDI GCAATG 1 cut(s) 351
BsrGI TGTACA 1 cut(s) 442
BsrI ACTGG 3 cut(s) 246, 786, 1088
BssECI CCNNGG 4 cut(s) 27, 1485, 2101, 2102
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 4 cut(s) 1331, 1659, 1877, 2103
Bst4CI ACNGT 9 cut(s) 235, 534, 598, 608, 1302, 1540, 1759, 1781, 1883
Bst6I CTCTTC 1 cut(s) 924
BstAPI GCANNNNNTGC 1 cut(s) 277
BstAUI TGTACA 1 cut(s) 442
BstC8I GCNNGC 5 cut(s) 189, 1216, 1530, 1962, 1974
BstDEI CTNAG 9 cut(s) 258, 601, 1116, 1168, 1395, 1515, 1637, 1713, 1790
BstDSI CCRYGG 2 cut(s) 27, 1485
BstF5I GGATG 5 cut(s) 439, 593, 811, 1382, 2023
BstFNI CGCG 4 cut(s) 29, 50, 1113, 1747
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 3 cut(s) 72, 343, 1115
BstMAI GTCTC 1 cut(s) 1554
BstNI CCWGG 4 cut(s) 1331, 1659, 1877, 2103
BstNSI RCATGY 6 cut(s) 628, 1218, 1532, 1670, 1837, 1964
BstSCI CCNGG 4 cut(s) 1329, 1657, 1875, 2101
BstSFI CTRYAG 1 cut(s) 753
BstSLI GKGCMC 1 cut(s) 2101
BstUI CGCG 4 cut(s) 29, 50, 1113, 1747
BstV1I GCAGC 6 cut(s) 211, 214, 439, 781, 1954, 1957
BstV2I GAAGAC 2 cut(s) 1669, 1688
BstX2I RGATCY 4 cut(s) 1228, 1405, 1851, 2087
BstYI RGATCY 4 cut(s) 1228, 1405, 1851, 2087
BsuRI GGCC 2 cut(s) 5, 2099
BtgI CCRYGG 2 cut(s) 27, 1485
BtgZI GCGATG 1 cut(s) 1094
BtsCI GGATG 5 cut(s) 439, 593, 811, 1382, 2023
BtsI GCAGTG 1 cut(s) 1076
BtsIMutI CAGTG 6 cut(s) 253, 530, 594, 613, 1076, 1081
Cac8I GCNNGC 5 cut(s) 189, 1216, 1530, 1962, 1974
CaiI CAGNNNCTG 1 cut(s) 1552
CfoI GCGC 3 cut(s) 72, 343, 1115
Cfr13I GGNCC 6 cut(s) 304, 865, 1198, 1585, 2097, 2098
Cfr42I CCGCGG 1 cut(s) 30
CseI GACGC 3 cut(s) 17, 1181, 1753
Csp6I GTAC 3 cut(s) 443, 785, 1536
CviQI GTAC 3 cut(s) 443, 785, 1536
DdeI CTNAG 9 cut(s) 258, 601, 1116, 1168, 1395, 1515, 1637, 1713, 1790
DraI TTTAAA 2 cut(s) 1101, 1752
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 924
EarI CTCTTC 1 cut(s) 924
Eco130I CCWWGG 1 cut(s) 1485
Eco24I GRGCYC 1 cut(s) 2101
Eco47I GGWCC 4 cut(s) 304, 865, 1198, 1585
Eco47III AGCGCT 1 cut(s) 342
Eco57I CTGAAG 4 cut(s) 1017, 1788, 1989, 2052
EcoO109I RGGNCCY 2 cut(s) 2097, 2098
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 4 cut(s) 1329, 1657, 1875, 2101
EcoT14I CCWWGG 1 cut(s) 1485
EcoT22I ATGCAT 2 cut(s) 1216, 1220
EcoT38I GRGCYC 1 cut(s) 2101
ErhI CCWWGG 1 cut(s) 1485
FaqI GGGAC 3 cut(s) 878, 1745, 1880
FauI CCCGC 2 cut(s) 22, 34
FbaI TGATCA 3 cut(s) 150, 502, 1180
FblI GTMKAC 2 cut(s) 1290, 1304
FokI GGATG 5 cut(s) 446, 600, 818, 1369, 2030
FriOI GRGCYC 1 cut(s) 2101
FspBI CTAG 5 cut(s) 1047, 1065, 1202, 1313, 1613
GlaI GCGC 3 cut(s) 71, 342, 1114
GsaI CCCAGC 2 cut(s) 126, 632
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 2 cut(s) 5, 2099
HapII CCGG 2 cut(s) 199, 803
HgaI GACGC 3 cut(s) 17, 1181, 1753
HhaI GCGC 3 cut(s) 72, 343, 1115
Hin6I GCGC 3 cut(s) 70, 341, 1113
HinP1I GCGC 3 cut(s) 70, 341, 1113
HincII GTYRAC 2 cut(s) 243, 822
HindII GTYRAC 2 cut(s) 243, 822
HindIII AAGCTT 1 cut(s) 416
HpaI GTTAAC 1 cut(s) 822
HpaII CCGG 2 cut(s) 199, 803
HphI GGTGA 5 cut(s) 31, 188, 792, 1473, 1793
Hpy166II GTNNAC 4 cut(s) 243, 822, 1291, 1305
Hpy8I GTNNAC 4 cut(s) 243, 822, 1291, 1305
Hpy99I CGWCG 2 cut(s) 11, 121
HpyAV CCTTC 8 cut(s) 196, 992, 1435, 1443, 1738, 1773, 2067, 2091
HpyCH4III ACNGT 9 cut(s) 235, 534, 598, 608, 1302, 1540, 1759, 1781, 1883
HpyCH4IV ACGT 2 cut(s) 1008, 1520
HpyF3I CTNAG 9 cut(s) 258, 601, 1116, 1168, 1395, 1515, 1637, 1713, 1790
HpySE526I ACGT 2 cut(s) 1008, 1520
HspAI GCGC 3 cut(s) 70, 341, 1113
Ksp22I TGATCA 3 cut(s) 150, 502, 1180
KspAI GTTAAC 1 cut(s) 822
KspI CCGCGG 1 cut(s) 30
LmnI GCTCC 4 cut(s) 42, 541, 899, 1013
Lsp1109I GCAGC 6 cut(s) 211, 214, 439, 781, 1954, 1957
LweI GCATC 4 cut(s) 271, 394, 424, 1349
MaeI CTAG 5 cut(s) 1047, 1065, 1202, 1313, 1613
MaeII ACGT 2 cut(s) 1008, 1520
MaeIII GTNAC 3 cut(s) 490, 1608, 2109
MflI RGATCY 4 cut(s) 1228, 1405, 1851, 2087
MhlI GDGCHC 2 cut(s) 39, 2101
MluI ACGCGT 1 cut(s) 1745
MlyI GAGTC 2 cut(s) 422, 1331
MmeI TCCRAC 2 cut(s) 565, 991
Mph1103I ATGCAT 2 cut(s) 1216, 1220
MroXI GAANNNNTTC 2 cut(s) 525, 1801
MspA1I CMGCKG 3 cut(s) 29, 995, 1591
MspI CCGG 2 cut(s) 199, 803
MspR9I CCNGG 4 cut(s) 1331, 1659, 1877, 2103
Mva1269I GAATGC 2 cut(s) 82, 1772
MvaI CCWGG 4 cut(s) 1331, 1659, 1877, 2103
MvnI CGCG 4 cut(s) 29, 50, 1113, 1747
NcoI CCATGG 1 cut(s) 1485
NlaIV GGNNCC 4 cut(s) 866, 1475, 2099, 2100
NsiI ATGCAT 2 cut(s) 1216, 1220
NspI RCATGY 6 cut(s) 628, 1218, 1532, 1670, 1837, 1964
PaeI GCATGC 3 cut(s) 1218, 1532, 1964
PasI CCCWGGG 1 cut(s) 2102
PciI ACATGT 1 cut(s) 1666
PcsI WCGNNNNNNNCGW 1 cut(s) 188
PctI GAATGC 2 cut(s) 82, 1772
PdmI GAANNNNTTC 2 cut(s) 525, 1801
PleI GAGTC 2 cut(s) 422, 1330
PpsI GAGTC 2 cut(s) 422, 1330
PscI ACATGT 1 cut(s) 1666
PshBI ATTAAT 1 cut(s) 1569
PsiI TTATAA 2 cut(s) 1496, 2119
Psp6I CCWGG 4 cut(s) 1329, 1657, 1875, 2101
PspFI CCCAGC 2 cut(s) 122, 628
PspGI CCWGG 4 cut(s) 1329, 1657, 1875, 2101
PspN4I GGNNCC 4 cut(s) 866, 1475, 2099, 2100
PspOMI GGGCCC 1 cut(s) 2097
PspPI GGNCC 6 cut(s) 304, 865, 1198, 1585, 2097, 2098
PstNI CAGNNNCTG 1 cut(s) 1552
PsuI RGATCY 4 cut(s) 1228, 1405, 1851, 2087
PvuII CAGCTG 2 cut(s) 995, 1591
RsaI GTAC 3 cut(s) 444, 786, 1537
RsaNI GTAC 3 cut(s) 443, 785, 1536
SacII CCGCGG 1 cut(s) 30
Sau96I GGNCC 6 cut(s) 304, 865, 1198, 1585, 2097, 2098
ScaI AGTACT 1 cut(s) 1537
SchI GAGTC 2 cut(s) 422, 1331
ScrFI CCNGG 4 cut(s) 1331, 1659, 1877, 2103
SduI GDGCHC 2 cut(s) 39, 2101
SfaNI GCATC 4 cut(s) 271, 394, 424, 1349
SfcI CTRYAG 1 cut(s) 753
Sfr303I CCGCGG 1 cut(s) 30
SgrBI CCGCGG 1 cut(s) 30
SinI GGWCC 4 cut(s) 304, 865, 1198, 1585
SmlI CTYRAG 2 cut(s) 86, 266
SmoI CTYRAG 2 cut(s) 86, 266
SphI GCATGC 3 cut(s) 1218, 1532, 1964
SsiI CCGC 8 cut(s) 27, 29, 40, 50, 81, 185, 254, 1725
SspMI CTAG 5 cut(s) 1047, 1065, 1202, 1313, 1613
StyD4I CCNGG 4 cut(s) 1329, 1657, 1875, 2101
StyI CCWWGG 1 cut(s) 1485
TaaI ACNGT 9 cut(s) 235, 534, 598, 608, 1302, 1540, 1759, 1781, 1883
TaiI ACGT 2 cut(s) 1011, 1523
TaqI TCGA 3 cut(s) 1071, 1402, 1412
TatI WGTACW 2 cut(s) 442, 1535
TauI GCSGC 4 cut(s) 83, 187, 257, 1727
TscAI CASTG 6 cut(s) 253, 537, 601, 613, 1083, 1088
TseI GCWGC 6 cut(s) 224, 227, 452, 794, 1942, 1945
TspDTI ATGAA 8 cut(s) 563, 822, 858, 1199, 1265, 1458, 1755, 2049
TspGWI ACGGA 2 cut(s) 182, 1756
TspRI CASTG 6 cut(s) 253, 537, 601, 613, 1083, 1088
VpaK11BI GGWCC 4 cut(s) 304, 865, 1198, 1585
VspI ATTAAT 1 cut(s) 1569
XapI RAATTY 5 cut(s) 170, 521, 809, 845, 1734
XceI RCATGY 6 cut(s) 628, 1218, 1532, 1670, 1837, 1964
XcmI CCANNNNNNNNNTGG 1 cut(s) 1838
XmiI GTMKAC 2 cut(s) 1290, 1304
XmnI GAANNNNTTC 2 cut(s) 525, 1801
XspI CTAG 5 cut(s) 1047, 1065, 1202, 1313, 1613
ZrmI AGTACT 1 cut(s) 1537
Zsp2I ATGCAT 2 cut(s) 1216, 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.