pycom16g02940

Sec-independent protein translocase protein TATC

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
1851703 .. 1853784
2082 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1065 bp
ATGGGAAGCATCAGTTATGCTTCCATTTCCAACTTGAACTTCATCCGGAATCACACCCACAATTGCTTCGACTTGCGGGGACCAATCAGAAATCAGCTGGGTTCCGTTCGAGTCCACCACTCGAGGAGGCTGAGACCGGAGCTCAGTGCTCTGCGGATCCGGAGGAGCCTCCGCGGTGACGTCGTTTGCTACGCTGTTGATGATGATTTGAGAGAGAAGCAGCAGGAGTTTGGCGCTGGACCTGGGGTTGGGTCCGCTGTCAAGGAGAGGCCTTCTACTGATTTGGTTGATGGAGTGAAAGAAGACAATGGAGGAAGTTCGATTTCCAATTTTCTGTATCCTAGTCAAGAGCTCCTCCCGGATGATAAAGAGATGACCATATTCGATCATCTGGAAGAGCTGCGTCAGAGACTTTTTATATCAGTTATAGCGGTTGGTGTTTCTATTGGGGGGTGCTTTGCATATTCTAAAGACCTTATAGTATTTCTTGAAGCTCCGGTTAAAGAACAAGGTGTAAAGTTCCTGCAGCTAGCTCCTGGCGAGTTTTTCTTTACTACTATAAAGGTATCAGGATATTGCGGCATTCTATTGGGGAGCCCCATCATTCTGTATGAGCTTATAGCCTTTGTTCTCCCAGGATTAACGAGAGACGAGAGAAAATTTCTGGGGCCAATTGTTTTAGGCTCATCGGTTCTTTTCTATGCCGGTATCACCTTCTCCTATATGGTGTTGACACCAGCAGCCTTGAACTTTTTTGTTACGTATGCAGAAGGTGTTGTGGAATCTTTATGGTCCATCGATCAATACTTTGAGTTCGTACTTGTTCTCATGTTCAGCACAGGCTTGTCTTTCCAGGTTCCGGTTATACAATTTCTCCTTGGACAAGTCGGTCTGGTATCAGGAGACCAAATGCTATCAATTTGGAGGTATGTTGTGGTTGGCGCTGTTGTGGCAGCTGCTGTGGTTACCCCGTCAACGGATCCACTCACTCAGCTTCTTCTGGCAGCACCCCTCCTCGGTCTTTACTTAGGGGGTGCCTGGGTGGTTAAGCTTACTGGCCGGTGA

Protein Analysis

355

Amino Acids

38.87

Weight (kDa)

5.79

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TatC PF00902 129 - 337 6.6e-67 Sec-independent protein translocase protein (TatC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013511)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 888
AatII GACGTC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 1034
AccII CGCG 1 cut(s) 174
AccIII TCCGGA 2 cut(s) 45, 159
AciI CCGC 7 cut(s) 76, 154, 172, 174, 255, 431, 579
AclWI GGATC 4 cut(s) 151, 164, 974, 987
AcoI YGGCCR 1 cut(s) 1057
AcsI RAATTY 1 cut(s) 659
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 1 cut(s) 819
AfiI CCNNNNNNNGG 4 cut(s) 248, 859, 976, 1016
AgsI TTSAA 3 cut(s) 37, 491, 748
AjnI CCWGG 5 cut(s) 241, 535, 634, 852, 1037
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
Alw21I GWGCWC 3 cut(s) 144, 151, 354
Alw26I GTCTC 4 cut(s) 127, 403, 642, 897
AlwI GGATC 4 cut(s) 151, 164, 974, 987
AlwNI CAGNNNCTG 1 cut(s) 959
Ama87I CYCGRG 1 cut(s) 121
Aor13HI TCCGGA 2 cut(s) 45, 159
AoxI GGCC 3 cut(s) 269, 668, 1057
ApeKI GCWGC 7 cut(s) 220, 400, 526, 740, 953, 956, 1004
ApoI RAATTY 1 cut(s) 659
AspLEI GCGC 2 cut(s) 236, 944
AspS9I GGNCC 5 cut(s) 80, 239, 252, 668, 792
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 2 cut(s) 188, 703
AsuNHI GCTAGC 1 cut(s) 529
AvaI CYCGRG 1 cut(s) 121
AvaII GGWCC 4 cut(s) 80, 239, 252, 792
BamHI GGATCC 2 cut(s) 156, 979
BanI GGYRCC 1 cut(s) 1034
BanII GRGCYC 3 cut(s) 144, 354, 599
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 3 cut(s) 144, 151, 354
BbvI GCAGC 7 cut(s) 232, 387, 538, 752, 943, 965, 1016
BccI CCATC 3 cut(s) 284, 608, 803
BciT130I CCWGG 5 cut(s) 243, 537, 636, 854, 1039
BciVI GTATCC 1 cut(s) 348
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 4 cut(s) 127, 403, 642, 897
BfaI CTAG 2 cut(s) 342, 530
BfmI CTRYAG 1 cut(s) 524
BfoI RGCGCY 2 cut(s) 237, 945
BfuI GTATCC 1 cut(s) 348
BisI GCNGC 8 cut(s) 221, 401, 527, 580, 741, 954, 957, 1005
BlsI GCNGC 8 cut(s) 222, 402, 528, 581, 742, 955, 958, 1006
Bme1390I CCNGG 6 cut(s) 243, 359, 537, 636, 854, 1039
Bme18I GGWCC 4 cut(s) 80, 239, 252, 792
BmeT110I CYCGRG 1 cut(s) 121
BmgT120I GGNCC 5 cut(s) 80, 239, 252, 668, 792
BmrFI CCNGG 6 cut(s) 243, 359, 537, 636, 854, 1039
BmsI GCATC 1 cut(s) 18
BmtI GCTAGC 1 cut(s) 533
BpiI GAAGAC 1 cut(s) 309
BpuMI CCSGG 1 cut(s) 359
Bsa29I ATCGAT 1 cut(s) 798
BsaAI YACGTR 1 cut(s) 762
BsaHI GRCGYC 1 cut(s) 180
BsaI GGTCTC 2 cut(s) 127, 897
BsaJI CCNNGG 6 cut(s) 172, 242, 634, 877, 1015, 1038
BsaWI WCCGGW 5 cut(s) 45, 136, 159, 496, 859
BsaXI ACNNNNNCTCC 2 cut(s) 858, 888
Bsc4I CCNNNNNNNGG 4 cut(s) 248, 859, 976, 1016
Bse118I RCCGGY 2 cut(s) 704, 1059
Bse1I ACTGG 1 cut(s) 1060
BseAI TCCGGA 2 cut(s) 45, 159
BseBI CCWGG 5 cut(s) 243, 537, 636, 854, 1039
BseCI ATCGAT 1 cut(s) 798
BseDI CCNNGG 6 cut(s) 172, 242, 634, 877, 1015, 1038
BseGI GGATG 2 cut(s) 42, 367
BseLI CCNNNNNNNGG 4 cut(s) 248, 859, 976, 1016
BseMII CTCAG 3 cut(s) 122, 157, 1004
BseNI ACTGG 1 cut(s) 1060
BseRI GAGGAG 4 cut(s) 139, 178, 344, 1004
BseXI GCAGC 7 cut(s) 232, 387, 538, 752, 943, 965, 1016
BseYI CCCAGC 1 cut(s) 97
Bsh1236I CGCG 1 cut(s) 174
BshFI GGCC 3 cut(s) 271, 670, 1059
BshNI GGYRCC 1 cut(s) 1034
BshVI ATCGAT 1 cut(s) 798
BsiHKAI GWGCWC 3 cut(s) 144, 151, 354
BsiHKCI CYCGRG 1 cut(s) 121
BsiSI CCGG 8 cut(s) 46, 137, 160, 359, 497, 705, 860, 1060
BslFI GGGAC 1 cut(s) 93
BslI CCNNNNNNNGG 4 cut(s) 248, 859, 976, 1016
BsmAI GTCTC 4 cut(s) 127, 403, 642, 897
BsmBI CGTCTC 1 cut(s) 642
BsmFI GGGAC 1 cut(s) 93
BsmI GAATGC 1 cut(s) 582
BsnI GGCC 3 cut(s) 271, 670, 1059
Bso31I GGTCTC 2 cut(s) 127, 897
BsoBI CYCGRG 1 cut(s) 121
Bsp1286I GDGCHC 4 cut(s) 144, 151, 354, 599
Bsp13I TCCGGA 2 cut(s) 45, 159
Bsp143I GATC 4 cut(s) 156, 385, 799, 979
BspACI CCGC 7 cut(s) 76, 154, 172, 174, 255, 431, 579
BspANI GGCC 3 cut(s) 271, 670, 1059
BspCNI CTCAG 3 cut(s) 123, 156, 1003
BspDI ATCGAT 1 cut(s) 798
BspEI TCCGGA 2 cut(s) 45, 159
BspFNI CGCG 1 cut(s) 174
BspMAI CTGCAG 1 cut(s) 528
BspOI GCTAGC 1 cut(s) 533
BspPI GGATC 4 cut(s) 151, 164, 974, 987
BspQI GCTCTTC 1 cut(s) 390
BspT107I GGYRCC 1 cut(s) 1034
BspTNI GGTCTC 2 cut(s) 127, 897
BsrFI RCCGGY 2 cut(s) 704, 1059
BsrI ACTGG 1 cut(s) 1060
BssAI RCCGGY 2 cut(s) 704, 1059
BssECI CCNNGG 6 cut(s) 172, 242, 634, 877, 1015, 1038
BssMI GATC 4 cut(s) 156, 385, 799, 979
BssNI GRCGYC 1 cut(s) 180
BssT1I CCWWGG 1 cut(s) 877
Bst2UI CCWGG 5 cut(s) 243, 537, 636, 854, 1039
Bst6I CTCTTC 1 cut(s) 390
BstACI GRCGYC 1 cut(s) 180
BstBAI YACGTR 1 cut(s) 762
BstC8I GCNNGC 1 cut(s) 531
BstDEI CTNAG 4 cut(s) 131, 143, 990, 1027
BstDSI CCRYGG 1 cut(s) 172
BstEII GGTNACC 1 cut(s) 964
BstF5I GGATG 2 cut(s) 42, 367
BstFNI CGCG 1 cut(s) 174
BstH2I RGCGCY 2 cut(s) 237, 945
BstHHI GCGC 2 cut(s) 236, 944
BstKTI GATC 4 cut(s) 159, 388, 802, 982
BstMAI GTCTC 4 cut(s) 127, 403, 642, 897
BstMBI GATC 4 cut(s) 156, 385, 799, 979
BstMWI GCNNNNNNNGC 1 cut(s) 950
BstNI CCWGG 5 cut(s) 243, 537, 636, 854, 1039
BstPI GGTNACC 1 cut(s) 964
BstSCI CCNGG 6 cut(s) 241, 357, 535, 634, 852, 1037
BstSFI CTRYAG 1 cut(s) 524
BstSNI TACGTA 1 cut(s) 762
BstUI CGCG 1 cut(s) 174
BstV1I GCAGC 7 cut(s) 232, 387, 538, 752, 943, 965, 1016
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 2 cut(s) 156, 979
BstYI RGATCY 2 cut(s) 156, 979
Bsu15I ATCGAT 1 cut(s) 798
BsuI GTATCC 1 cut(s) 348
BsuRI GGCC 3 cut(s) 271, 670, 1059
BsuTUI ATCGAT 1 cut(s) 798
BtgI CCRYGG 1 cut(s) 172
BtsCI GGATG 2 cut(s) 42, 367
BtsIMutI CAGTG 1 cut(s) 151
Cac8I GCNNGC 1 cut(s) 531
CaiI CAGNNNCTG 1 cut(s) 959
CfoI GCGC 2 cut(s) 236, 944
Cfr10I RCCGGY 2 cut(s) 704, 1059
Cfr13I GGNCC 5 cut(s) 80, 239, 252, 668, 792
Cfr42I CCGCGG 1 cut(s) 175
ClaI ATCGAT 1 cut(s) 798
CseI GACGC 1 cut(s) 392
Csp6I GTAC 1 cut(s) 818
CviAII CATG 1 cut(s) 829
CviQI GTAC 1 cut(s) 818
DdeI CTNAG 4 cut(s) 131, 143, 990, 1027
DpnI GATC 4 cut(s) 158, 387, 801, 981
DpnII GATC 4 cut(s) 156, 385, 799, 979
DrdI GACNNNNNNGTC 1 cut(s) 888
DseDI GACNNNNNNGTC 1 cut(s) 888
EaeI YGGCCR 1 cut(s) 1057
Eam1104I CTCTTC 1 cut(s) 390
EarI CTCTTC 1 cut(s) 390
Ecl136II GAGCTC 2 cut(s) 142, 352
Eco105I TACGTA 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 877
Eco147I AGGCCT 1 cut(s) 271
Eco24I GRGCYC 3 cut(s) 144, 354, 599
Eco31I GGTCTC 2 cut(s) 127, 897
Eco47I GGWCC 4 cut(s) 80, 239, 252, 792
Eco53kI GAGCTC 2 cut(s) 142, 352
Eco88I CYCGRG 1 cut(s) 121
Eco91I GGTNACC 1 cut(s) 964
EcoICRI GAGCTC 2 cut(s) 142, 352
EcoO65I GGTNACC 1 cut(s) 964
EcoRII CCWGG 5 cut(s) 241, 535, 634, 852, 1037
EcoT14I CCWWGG 1 cut(s) 877
EcoT38I GRGCYC 3 cut(s) 144, 354, 599
ErhI CCWWGG 1 cut(s) 877
Esp3I CGTCTC 1 cut(s) 642
FaeI CATG 1 cut(s) 832
FaqI GGGAC 1 cut(s) 93
FatI CATG 1 cut(s) 828
FauI CCCGC 1 cut(s) 69
Fnu4HI GCNGC 8 cut(s) 221, 401, 527, 580, 741, 954, 957, 1005
FokI GGATG 2 cut(s) 29, 374
FriOI GRGCYC 3 cut(s) 144, 354, 599
Fsp4HI GCNGC 8 cut(s) 221, 401, 527, 580, 741, 954, 957, 1005
FspBI CTAG 2 cut(s) 342, 530
GlaI GCGC 2 cut(s) 235, 943
GluI GCNGC 8 cut(s) 221, 401, 527, 580, 741, 954, 957, 1005
GsaI CCCAGC 1 cut(s) 101
HaeII RGCGCY 2 cut(s) 237, 945
HaeIII GGCC 3 cut(s) 271, 670, 1059
HapII CCGG 8 cut(s) 46, 137, 160, 359, 497, 705, 860, 1060
HgaI GACGC 1 cut(s) 392
HhaI GCGC 2 cut(s) 236, 944
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 1 cut(s) 832
Hin6I GCGC 2 cut(s) 234, 942
HinP1I GCGC 2 cut(s) 234, 942
HincII GTYRAC 2 cut(s) 732, 975
HindII GTYRAC 2 cut(s) 732, 975
HindIII AAGCTT 1 cut(s) 1049
HinfI GANTC 3 cut(s) 49, 111, 782
HpaII CCGG 8 cut(s) 46, 137, 160, 359, 497, 705, 860, 1060
HphI GGTGA 2 cut(s) 188, 703
Hpy166II GTNNAC 3 cut(s) 115, 732, 975
Hpy188I TCNGA 2 cut(s) 89, 408
Hpy188III TCNNGA 7 cut(s) 46, 160, 347, 392, 488, 570, 900
Hpy8I GTNNAC 3 cut(s) 115, 732, 975
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 3 cut(s) 282, 724, 764
HpyCH4IV ACGT 2 cut(s) 180, 761
HpyCH4V TGCA 3 cut(s) 461, 526, 767
HpyF10VI GCNNNNNNNGC 1 cut(s) 950
HpyF3I CTNAG 4 cut(s) 131, 143, 990, 1027
HpySE526I ACGT 2 cut(s) 180, 761
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 1 cut(s) 832
HspAI GCGC 2 cut(s) 234, 942
Kpn2I TCCGGA 2 cut(s) 45, 159
KspI CCGCGG 1 cut(s) 175
Kzo9I GATC 4 cut(s) 156, 385, 799, 979
LguI GCTCTTC 1 cut(s) 390
LmnI GCTCC 6 cut(s) 139, 165, 357, 499, 538, 594
Lsp1109I GCAGC 7 cut(s) 232, 387, 538, 752, 943, 965, 1016
LweI GCATC 1 cut(s) 18
MaeI CTAG 2 cut(s) 342, 530
MaeII ACGT 2 cut(s) 180, 761
MaeIII GTNAC 3 cut(s) 176, 757, 964
MalI GATC 4 cut(s) 158, 387, 801, 981
MboI GATC 4 cut(s) 156, 385, 799, 979
MboII GAAGA 3 cut(s) 314, 407, 989
MfeI CAATTG 2 cut(s) 61, 672
MflI RGATCY 2 cut(s) 156, 979
MhlI GDGCHC 4 cut(s) 144, 151, 354, 599
MluCI AATT 6 cut(s) 61, 328, 659, 672, 869, 918
MlyI GAGTC 1 cut(s) 120
MmeI TCCRAC 1 cut(s) 54
MroI TCCGGA 2 cut(s) 45, 159
MseI TTAA 3 cut(s) 501, 641, 1047
MspA1I CMGCKG 4 cut(s) 97, 174, 257, 956
MspI CCGG 8 cut(s) 46, 137, 160, 359, 497, 705, 860, 1060
MspR9I CCNGG 6 cut(s) 243, 359, 537, 636, 854, 1039
MunI CAATTG 2 cut(s) 61, 672
Mva1269I GAATGC 1 cut(s) 582
MvaI CCWGG 5 cut(s) 243, 537, 636, 854, 1039
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 1 cut(s) 950
NciI CCSGG 1 cut(s) 359
NdeII GATC 4 cut(s) 156, 385, 799, 979
NheI GCTAGC 1 cut(s) 529
NlaIII CATG 1 cut(s) 832
NmuCI GTSAC 1 cut(s) 176
PaeR7I CTCGAG 1 cut(s) 121
PceI AGGCCT 1 cut(s) 271
PciSI GCTCTTC 1 cut(s) 390
PctI GAATGC 1 cut(s) 582
PfeI GAWTC 2 cut(s) 49, 782
PfoI TCCNGGA 1 cut(s) 357
PkrI GCNGC 8 cut(s) 222, 402, 528, 581, 742, 955, 958, 1006
PleI GAGTC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 119
Ppu21I YACGTR 1 cut(s) 762
Psp124BI GAGCTC 2 cut(s) 144, 354
Psp6I CCWGG 5 cut(s) 241, 535, 634, 852, 1037
PspEI GGTNACC 1 cut(s) 964
PspFI CCCAGC 1 cut(s) 97
PspGI CCWGG 5 cut(s) 241, 535, 634, 852, 1037
PspPI GGNCC 5 cut(s) 80, 239, 252, 668, 792
PspXI VCTCGAGB 1 cut(s) 121
PstI CTGCAG 1 cut(s) 528
PstNI CAGNNNCTG 1 cut(s) 959
PsuI RGATCY 2 cut(s) 156, 979
PvuII CAGCTG 2 cut(s) 97, 956
RsaI GTAC 1 cut(s) 819
RsaNI GTAC 1 cut(s) 818
SacI GAGCTC 2 cut(s) 144, 354
SacII CCGCGG 1 cut(s) 175
SapI GCTCTTC 1 cut(s) 390
SaqAI TTAA 3 cut(s) 501, 641, 1047
SatI GCNGC 8 cut(s) 221, 401, 527, 580, 741, 954, 957, 1005
Sau3AI GATC 4 cut(s) 156, 385, 799, 979
Sau96I GGNCC 5 cut(s) 80, 239, 252, 668, 792
SchI GAGTC 1 cut(s) 120
ScrFI CCNGG 6 cut(s) 243, 359, 537, 636, 854, 1039
SduI GDGCHC 4 cut(s) 144, 151, 354, 599
SfaNI GCATC 1 cut(s) 18
SfcI CTRYAG 1 cut(s) 524
Sfr274I CTCGAG 1 cut(s) 121
Sfr303I CCGCGG 1 cut(s) 175
SgrBI CCGCGG 1 cut(s) 175
SinI GGWCC 4 cut(s) 80, 239, 252, 792
SlaI CTCGAG 1 cut(s) 121
SmlI CTYRAG 1 cut(s) 121
SmoI CTYRAG 1 cut(s) 121
SnaBI TACGTA 1 cut(s) 762
Sse9I AATT 6 cut(s) 61, 328, 659, 672, 869, 918
SseBI AGGCCT 1 cut(s) 271
SsiI CCGC 7 cut(s) 76, 154, 172, 174, 255, 431, 579
SspMI CTAG 2 cut(s) 342, 530
SstI GAGCTC 2 cut(s) 144, 354
StuI AGGCCT 1 cut(s) 271
StyD4I CCNGG 6 cut(s) 241, 357, 535, 634, 852, 1037
StyI CCWWGG 1 cut(s) 877
TaiI ACGT 2 cut(s) 183, 764
TaqI TCGA 6 cut(s) 69, 109, 122, 320, 384, 798
TaqII GACCGA 2 cut(s) 878, 1007
TasI AATT 6 cut(s) 61, 328, 659, 672, 869, 918
TauI GCSGC 1 cut(s) 582
TfiI GAWTC 2 cut(s) 49, 782
Tru1I TTAA 3 cut(s) 501, 641, 1047
Tru9I TTAA 3 cut(s) 501, 641, 1047
TscAI CASTG 1 cut(s) 151
TseFI GTSAC 1 cut(s) 176
TseI GCWGC 7 cut(s) 220, 400, 526, 740, 953, 956, 1004
Tsp45I GTSAC 1 cut(s) 176
TspDTI ATGAA 1 cut(s) 31
TspGWI ACGGA 2 cut(s) 94, 992
TspRI CASTG 1 cut(s) 151
VpaK11BI GGWCC 4 cut(s) 80, 239, 252, 792
XapI RAATTY 1 cut(s) 659
XhoI CTCGAG 1 cut(s) 121
XspI CTAG 2 cut(s) 342, 530
ZraI GACGTC 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.