Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0009296

Physical Location & Seq

Genomic Coordinates Forward (+)

9492448 .. 9496272

Gene Structure 3825 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGAAGATCAGCATCAATTCGATGGCTCGGCGAGTCGAGGTCGATAATCGCTATCCTCTCCGATTTTACTTCCGAATCGCCGATAATCTTCTCAGACAGGCTAGTATTTACCGAGAGGAGAAAAACATCCTAGATTTGTACGTTATACTTCTACGATTCTCAAGGTACGTAAAGAGCTTCGTTGTGATCCCCTTTTGTGGGATTGATAGTGTTAAACTGCTAAAAGTACTAGATGAGCTTGAATCTTTAAAGCCAGAAGCCCTGCGCCTAGTGAGCAAACTTAACGAGGCCCAAGCAGTTGCTCAACTACCTCAACTTGAAAGCCTAGAAGGCACTTCAAATGGTTTGGCAACGTCTTCTTTAGAGTGGCCTTCTGTGAACAATAAATCGTTGAGCCTAAGCGTTAGGCAGCCTGGTAGCTTGACATCTCCGTCATCATGGAAGTATAGAAATGATTATTCACAGATATCAACAAATACTACACAAATTGACAAGCAGTTCCAGAAGCTATCTTTTAATCTACCTCTTCCCAATAAAGAGACTTTGTCTAGACACTCCTTTTTGGGTCCAAATGGTCTTCAGGGCCAGTGGCTAGGACCTAGCGGAAAAGTTAAGGTTCAGTATCCAACCAGTACTGATTTAATCCCTACTGATAATTCAGACCTGAATCAGGCTGTACAAAATGATATTGTGGCTTTACAAGATGGTGACCCAGGAGGAATTAAATCTACAATGGAGTCGGTGCTCTCCTTGGATGATGGTGCATGGCCACGCTCTTCTCAGGAATCAAGTCCTTCATTGATTAATGGAGCAAGGGAAGATCCTTTCAAGTTGCTCATCCGTCAGCCTTCTCCTCCTCCTGTACTTGCTCAAGTGCAGCAGGAATATACTCCAATTCCTCTATCAAAAGTGGCAGATCCAAGGCCAGGACTTGCAAAACCTTCTCTGGATGGGATGCCAAGCTCTAATTCATATCAACATTTACATGTTCCAGTAAAATTGATGGATGATTTCTTGAGATTGGCTAGGGCTAATACAGAAAAAAACTTAGAGACATGTGGTATCCTTGCTGGTGCATTGAAAAACAAGGTTTTCCATATCACCACGCTAATAGTCCCAAAGCAAGAGTCGACCTCTGATTCGTGCCAAACGTTGAATGAGGAAGAAATATTTGAGGTTCAAGACAGATTATCTCTTTTTCCACTTGGCTGGATTCATACCTGTTTCATGTCGTCCGTTGATCTGCACACTCACTACTCATACCAGATTATGTTACCAGAAGCAATTGCAATCGTTATGGCTCCAACAGATACATCCAGTCCACACGGCATATTTCATCTATCCGACCCAGGTGGTGTGTCTGTAATTCGTAACTGTGATCAGCGTGGGTTTCATCCGCATGAAGAGCCCTCAGATGGAACCCCAATTTATGAGCATTGTTCTCATGTGTTTATAAACTCCAATCTGAGAATTAATGTTGTCGATCTGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006464 GO:0006508 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0016579 GO:0019538 GO:0031224 GO:0031410 GO:0031982 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033043 GO:0033157 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044088 GO:0044090 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046907 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070201 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:0071840 GO:0090087 GO:0090316 GO:0097708 GO:0098657 GO:1901564 GO:1903827 GO:1903829 GO:1904951

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

498

Amino Acids

55.46

Weight (kDa)

6.03

Isoelectric Point (pI)

44.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JAB	PF01398	324 - 427	1.6e-12	JAB1/Mov34/MPN/PAD-1 ubiquitin protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16144
fragaria_vesca	FvH4_4g19320 FvH4_4g19320 FvH4_4g19320
malus_domestica	MD13G1157700.v1.1 MD16G1158700.v1.1
prunus_persica	Prupe.1G125200_v2.0.a1
pyrus_communis	pycom13g13500 pycom16g13350
rosa_chinensis	RchiOBHm_Chr4g0424341
rosa_laevigata	RLG00000007483
rosa_multiflora	Rmu_sc0005995.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366290
rosa_rugosa	Rorug04G0196100 Rorug04G0196200 Rorug04G0196300 Rorug04G0196400
rosa_samantha	Rh4AG252900 Rh4BG258300 Rh4CG269300 Rh4DG252700
rosa_wichuraiana	Rw4G021810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AasI	GACNNNNNNGTC	1 cut(s)	430
AccI	GTMKAC	1 cut(s)	1130
AciI	CCGC	3 cut(s)	603, 1397, 1489
AclI	AACGTT	1 cut(s)	1151
AclWI	GGATC	3 cut(s)	181, 815, 911
AcoI	YGGCCR	1 cut(s)	767
AcuI	CTGAAG	1 cut(s)	563
AfaI	GTAC	6 cut(s)	140, 167, 228, 634, 678, 864
AfiI	CCNNNNNNNGG	5 cut(s)	197, 198, 670, 926, 1415
AflIII	ACRYGT	2 cut(s)	985, 1055
AgsI	TTSAA	7 cut(s)	242, 320, 339, 829, 1081, 1156, 1181
AjnI	CCWGG	4 cut(s)	412, 712, 925, 1348
AjuI	GAANNNNNNNTTGG	2 cut(s)	952, 984
AluBI	AGCT	5 cut(s)	177, 238, 420, 508, 963
AluI	AGCT	5 cut(s)	177, 238, 420, 508, 963
Alw21I	GWGCWC	1 cut(s)	747
Alw26I	GTCTC	2 cut(s)	533, 1046
AlwI	GGATC	3 cut(s)	181, 815, 911
AoxI	GGCC	5 cut(s)	288, 368, 583, 767, 923
ApeKI	GCWGC	2 cut(s)	409, 877
ArsI	GACNNNNNNTTYG	4 cut(s)	1112, 1123, 1144, 1155
AseI	ATTAAT	2 cut(s)	804, 1473
AspLEI	GCGC	1 cut(s)	267
AspS9I	GGNCC	4 cut(s)	289, 566, 583, 596
AsuHPI	GGTGA	2 cut(s)	719, 1093
AvaII	GGWCC	2 cut(s)	566, 596
BalI	TGGCCA	1 cut(s)	769
BanII	GRGCYC	1 cut(s)	1410
BbsI	GAAGAC	2 cut(s)	348, 569
Bbv12I	GWGCWC	1 cut(s)	747
BbvI	GCAGC	2 cut(s)	421, 889
BccI	CCATC	6 cut(s)	16, 698, 752, 944, 997, 1409
BceAI	ACGGC	1 cut(s)	1342
BciT130I	CCWGG	4 cut(s)	414, 714, 927, 1350
BciVI	GTATCC	2 cut(s)	633, 1073
BclI	TGATCA	1 cut(s)	1378
BcoDI	GTCTC	2 cut(s)	533, 1046
BfaI	CTAG	9 cut(s)	102, 131, 230, 269, 326, 549, 593, 600, 1026
BfuI	GTATCC	2 cut(s)	633, 1073
BglI	GCCNNNNNGGC	1 cut(s)	330
BisI	GCNGC	2 cut(s)	410, 878
BlsI	GCNGC	2 cut(s)	411, 879
BmcAI	AGTACT	2 cut(s)	228, 634
Bme1390I	CCNGG	4 cut(s)	414, 714, 927, 1350
Bme18I	GGWCC	2 cut(s)	566, 596
BmgT120I	GGNCC	4 cut(s)	289, 566, 583, 596
BmiI	GGNNCC	3 cut(s)	567, 1302, 1420
BmrFI	CCNGG	4 cut(s)	414, 714, 927, 1350
BmsI	GCATC	2 cut(s)	21, 945
BpiI	GAAGAC	2 cut(s)	348, 569
BplI	GAGNNNNNCTC	2 cut(s)	1118, 1150
Bpu10I	CCTNAGC	1 cut(s)	398
BpuEI	CTTGAG	3 cut(s)	145, 855, 1036
BsaAI	YACGTR	1 cut(s)	169
BsaBI	GATNNNNATC	1 cut(s)	11
BsaJI	CCNNGG	4 cut(s)	712, 750, 920, 1348
Bsc4I	CCNNNNNNNGG	5 cut(s)	197, 198, 670, 926, 1415
Bse1I	ACTGG	4 cut(s)	586, 630, 992, 1317
Bse8I	GATNNNNATC	1 cut(s)	11
BseBI	CCWGG	4 cut(s)	414, 714, 927, 1350
BseDI	CCNNGG	4 cut(s)	712, 750, 920, 1348
BseGI	GGATG	8 cut(s)	126, 760, 837, 955, 960, 1012, 1313, 1393
BseJI	GATNNNNATC	1 cut(s)	11
BseLI	CCNNNNNNNGG	5 cut(s)	197, 198, 670, 926, 1415
BseMII	CTCAG	4 cut(s)	106, 794, 1425, 1457
BseNI	ACTGG	4 cut(s)	586, 630, 992, 1317
BseRI	GAGGAG	3 cut(s)	131, 843, 846
BseXI	GCAGC	2 cut(s)	421, 889
BsgI	GTGCAG	2 cut(s)	896, 1229
BshFI	GGCC	5 cut(s)	290, 370, 585, 769, 925
BsiHKAI	GWGCWC	1 cut(s)	747
BslFI	GGGAC	1 cut(s)	1100
BslI	CCNNNNNNNGG	5 cut(s)	197, 198, 670, 926, 1415
BsmAI	GTCTC	2 cut(s)	533, 1046
BsmFI	GGGAC	1 cut(s)	1100
BsnI	GGCC	5 cut(s)	290, 370, 585, 769, 925
Bsp1286I	GDGCHC	2 cut(s)	747, 1410
Bsp1407I	TGTACA	1 cut(s)	676
Bsp143I	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
BspACI	CCGC	3 cut(s)	603, 1397, 1489
BspANI	GGCC	5 cut(s)	290, 370, 585, 769, 925
BspCNI	CTCAG	4 cut(s)	105, 793, 1424, 1458
BspLI	GGNNCC	3 cut(s)	567, 1302, 1420
BspPI	GGATC	3 cut(s)	181, 815, 911
BspQI	GCTCTTC	2 cut(s)	781, 1398
BsrGI	TGTACA	1 cut(s)	676
BsrI	ACTGG	4 cut(s)	586, 630, 992, 1317
BssECI	CCNNGG	4 cut(s)	712, 750, 920, 1348
BssMI	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
BssT1I	CCWWGG	2 cut(s)	750, 920
Bst2UI	CCWGG	4 cut(s)	414, 714, 927, 1350
Bst4CI	ACNGT	1 cut(s)	1376
Bst6I	CTCTTC	3 cut(s)	531, 781, 1398
BstAUI	TGTACA	1 cut(s)	676
BstBAI	YACGTR	1 cut(s)	169
BstDEI	CTNAG	6 cut(s)	92, 398, 780, 1048, 1411, 1466
BstEII	GGTNACC	1 cut(s)	707
BstENI	CCTNNNNNAGG	1 cut(s)	668
BstF5I	GGATG	8 cut(s)	126, 760, 837, 955, 960, 1012, 1313, 1393
BstHHI	GCGC	1 cut(s)	267
BstKTI	GATC	7 cut(s)	9, 189, 823, 919, 1243, 1381, 1486
BstMAI	GTCTC	2 cut(s)	533, 1046
BstMBI	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
BstMWI	GCNNNNNNNGC	3 cut(s)	273, 330, 1405
BstNI	CCWGG	4 cut(s)	414, 714, 927, 1350
BstNSI	RCATGY	2 cut(s)	989, 1059
BstPI	GGTNACC	1 cut(s)	707
BstSCI	CCNGG	4 cut(s)	412, 712, 925, 1348
BstSNI	TACGTA	1 cut(s)	169
BstV1I	GCAGC	2 cut(s)	421, 889
BstV2I	GAAGAC	2 cut(s)	348, 569
BstX2I	RGATCY	2 cut(s)	820, 916
BstXI	CCANNNNNNTGG	1 cut(s)	1209
BstYI	RGATCY	2 cut(s)	820, 916
BsuI	GTATCC	2 cut(s)	633, 1073
BsuRI	GGCC	5 cut(s)	290, 370, 585, 769, 925
BtsCI	GGATG	8 cut(s)	126, 760, 837, 955, 960, 1012, 1313, 1393
BtsIMutI	CAGTG	1 cut(s)	593
CfoI	GCGC	1 cut(s)	267
Cfr13I	GGNCC	4 cut(s)	289, 566, 583, 596
Csp6I	GTAC	6 cut(s)	139, 166, 227, 633, 677, 863
CviAII	CATG	7 cut(s)	438, 765, 986, 1056, 1228, 1400, 1445
CviQI	GTAC	6 cut(s)	139, 166, 227, 633, 677, 863
DdeI	CTNAG	6 cut(s)	92, 398, 780, 1048, 1411, 1466
DpnI	GATC	7 cut(s)	8, 188, 822, 918, 1242, 1380, 1485
DpnII	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
DraI	TTTAAA	1 cut(s)	249
DrdI	GACNNNNNNGTC	1 cut(s)	430
DseDI	GACNNNNNNGTC	1 cut(s)	430
EaeI	YGGCCR	1 cut(s)	767
Eam1104I	CTCTTC	3 cut(s)	531, 781, 1398
EarI	CTCTTC	3 cut(s)	531, 781, 1398
Eco105I	TACGTA	1 cut(s)	169
Eco130I	CCWWGG	2 cut(s)	750, 920
Eco24I	GRGCYC	1 cut(s)	1410
Eco32I	GATATC	1 cut(s)	468
Eco47I	GGWCC	2 cut(s)	566, 596
Eco57I	CTGAAG	1 cut(s)	563
Eco91I	GGTNACC	1 cut(s)	707
EcoNI	CCTNNNNNAGG	1 cut(s)	668
EcoO109I	RGGNCCY	1 cut(s)	596
EcoO65I	GGTNACC	1 cut(s)	707
EcoRII	CCWGG	4 cut(s)	412, 712, 925, 1348
EcoRV	GATATC	1 cut(s)	468
EcoT14I	CCWWGG	2 cut(s)	750, 920
EcoT38I	GRGCYC	1 cut(s)	1410
ErhI	CCWWGG	2 cut(s)	750, 920
FaeI	CATG	7 cut(s)	441, 768, 989, 1059, 1231, 1403, 1448
FaqI	GGGAC	1 cut(s)	1100
FatI	CATG	7 cut(s)	437, 764, 985, 1055, 1227, 1399, 1444
FbaI	TGATCA	1 cut(s)	1378
FblI	GTMKAC	1 cut(s)	1130
Fnu4HI	GCNGC	2 cut(s)	410, 878
FokI	GGATG	8 cut(s)	113, 767, 824, 962, 967, 1019, 1300, 1380
FriOI	GRGCYC	1 cut(s)	1410
Fsp4HI	GCNGC	2 cut(s)	410, 878
FspBI	CTAG	9 cut(s)	102, 131, 230, 269, 326, 549, 593, 600, 1026
GlaI	GCGC	1 cut(s)	266
GluI	GCNGC	2 cut(s)	410, 878
HaeIII	GGCC	5 cut(s)	290, 370, 585, 769, 925
HhaI	GCGC	1 cut(s)	267
Hin1II	CATG	7 cut(s)	441, 768, 989, 1059, 1231, 1403, 1448
Hin6I	GCGC	1 cut(s)	265
HinP1I	GCGC	1 cut(s)	265
HincII	GTYRAC	1 cut(s)	1131
HindII	GTYRAC	1 cut(s)	1131
HphI	GGTGA	2 cut(s)	719, 1093
Hpy166II	GTNNAC	3 cut(s)	379, 1131, 1322
Hpy188I	TCNGA	8 cut(s)	62, 74, 95, 661, 1138, 1345, 1414, 1467
Hpy188III	TCNNGA	6 cut(s)	502, 549, 782, 947, 1015, 1181
Hpy8I	GTNNAC	3 cut(s)	379, 1131, 1322
HpyAV	CCTTC	5 cut(s)	323, 381, 804, 858, 951
HpyCH4III	ACNGT	1 cut(s)	1376
HpyCH4IV	ACGT	4 cut(s)	141, 168, 353, 1151
HpyCH4V	TGCA	6 cut(s)	764, 877, 935, 1076, 1246, 1289
HpyF10VI	GCNNNNNNNGC	3 cut(s)	273, 330, 1405
HpyF3I	CTNAG	6 cut(s)	92, 398, 780, 1048, 1411, 1466
HpySE526I	ACGT	4 cut(s)	141, 168, 353, 1151
Hsp92II	CATG	7 cut(s)	441, 768, 989, 1059, 1231, 1403, 1448
HspAI	GCGC	1 cut(s)	265
Ksp22I	TGATCA	1 cut(s)	1378
Kzo9I	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
LguI	GCTCTTC	2 cut(s)	781, 1398
LmnI	GCTCC	2 cut(s)	809, 1306
Lsp1109I	GCAGC	2 cut(s)	421, 889
LweI	GCATC	2 cut(s)	21, 945
MaeI	CTAG	9 cut(s)	102, 131, 230, 269, 326, 549, 593, 600, 1026
MaeII	ACGT	4 cut(s)	141, 168, 353, 1151
MaeIII	GTNAC	3 cut(s)	707, 1272, 1370
MalI	GATC	7 cut(s)	8, 188, 822, 918, 1242, 1380, 1485
MboI	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
MboII	GAAGA	9 cut(s)	16, 80, 348, 518, 569, 768, 830, 1175, 1415
MfeI	CAATTG	1 cut(s)	1284
MflI	RGATCY	2 cut(s)	820, 916
MhlI	GDGCHC	2 cut(s)	747, 1410
MlsI	TGGCCA	1 cut(s)	769
MluNI	TGGCCA	1 cut(s)	769
MlyI	GAGTC	3 cut(s)	42, 746, 1136
MmeI	TCCRAC	3 cut(s)	650, 1328, 1368
Mox20I	TGGCCA	1 cut(s)	769
MscI	TGGCCA	1 cut(s)	769
MseI	TTAA	9 cut(s)	213, 248, 282, 516, 612, 641, 723, 804, 1473
MslI	CAYNNNNRTG	2 cut(s)	984, 1398
Msp20I	TGGCCA	1 cut(s)	769
MspR9I	CCNGG	4 cut(s)	414, 714, 927, 1350
MunI	CAATTG	1 cut(s)	1284
MvaI	CCWGG	4 cut(s)	414, 714, 927, 1350
MwoI	GCNNNNNNNGC	3 cut(s)	273, 330, 1405
NdeII	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
NlaIII	CATG	7 cut(s)	441, 768, 989, 1059, 1231, 1403, 1448
NlaIV	GGNNCC	3 cut(s)	567, 1302, 1420
NmeAIII	GCCGAG	1 cut(s)	7
NmuCI	GTSAC	1 cut(s)	707
NspI	RCATGY	2 cut(s)	989, 1059
PciI	ACATGT	2 cut(s)	985, 1055
PciSI	GCTCTTC	2 cut(s)	781, 1398
PcsI	WCGNNNNNNNCGW	1 cut(s)	1148
PfeI	GAWTC	7 cut(s)	75, 156, 242, 667, 785, 1139, 1213
PflFI	GACNNNGTC	1 cut(s)	544
PkrI	GCNGC	2 cut(s)	411, 879
PleI	GAGTC	3 cut(s)	41, 745, 1135
PpsI	GAGTC	3 cut(s)	41, 745, 1135
Ppu21I	YACGTR	1 cut(s)	169
PpuMI	RGGWCCY	1 cut(s)	596
PscI	ACATGT	2 cut(s)	985, 1055
PshBI	ATTAAT	2 cut(s)	804, 1473
PsiI	TTATAA	1 cut(s)	1454
Psp1406I	AACGTT	1 cut(s)	1151
Psp5II	RGGWCCY	1 cut(s)	596
Psp6I	CCWGG	4 cut(s)	412, 712, 925, 1348
PspEI	GGTNACC	1 cut(s)	707
PspGI	CCWGG	4 cut(s)	412, 712, 925, 1348
PspN4I	GGNNCC	3 cut(s)	567, 1302, 1420
PspPI	GGNCC	4 cut(s)	289, 566, 583, 596
PspPPI	RGGWCCY	1 cut(s)	596
PsuI	RGATCY	2 cut(s)	820, 916
PsyI	GACNNNGTC	1 cut(s)	544
RsaI	GTAC	6 cut(s)	140, 167, 228, 634, 678, 864
RsaNI	GTAC	6 cut(s)	139, 166, 227, 633, 677, 863
RseI	CAYNNNNRTG	2 cut(s)	984, 1398
SalI	GTCGAC	1 cut(s)	1129
SapI	GCTCTTC	2 cut(s)	781, 1398
SaqAI	TTAA	9 cut(s)	213, 248, 282, 516, 612, 641, 723, 804, 1473
SatI	GCNGC	2 cut(s)	410, 878
Sau3AI	GATC	7 cut(s)	6, 186, 820, 916, 1240, 1378, 1483
Sau96I	GGNCC	4 cut(s)	289, 566, 583, 596
ScaI	AGTACT	2 cut(s)	228, 634
SchI	GAGTC	3 cut(s)	42, 746, 1136
ScrFI	CCNGG	4 cut(s)	414, 714, 927, 1350
SduI	GDGCHC	2 cut(s)	747, 1410
SfaNI	GCATC	2 cut(s)	21, 945
SinI	GGWCC	2 cut(s)	566, 596
SmiMI	CAYNNNNRTG	2 cut(s)	984, 1398
SmlI	CTYRAG	3 cut(s)	160, 870, 1015
SmoI	CTYRAG	3 cut(s)	160, 870, 1015
SnaBI	TACGTA	1 cut(s)	169
SsiI	CCGC	3 cut(s)	603, 1397, 1489
SspI	AATATT	1 cut(s)	1170
SspMI	CTAG	9 cut(s)	102, 131, 230, 269, 326, 549, 593, 600, 1026
StyD4I	CCNGG	4 cut(s)	412, 712, 925, 1348
StyI	CCWWGG	2 cut(s)	750, 920
TaaI	ACNGT	1 cut(s)	1376
TaiI	ACGT	4 cut(s)	144, 171, 356, 1154
TaqI	TCGA	5 cut(s)	20, 36, 42, 1130, 1482
TatI	WGTACW	4 cut(s)	226, 632, 676, 862
TfiI	GAWTC	7 cut(s)	75, 156, 242, 667, 785, 1139, 1213
Tru1I	TTAA	9 cut(s)	213, 248, 282, 516, 612, 641, 723, 804, 1473
Tru9I	TTAA	9 cut(s)	213, 248, 282, 516, 612, 641, 723, 804, 1473
TscAI	CASTG	1 cut(s)	593
TseFI	GTSAC	1 cut(s)	707
TseI	GCWGC	2 cut(s)	409, 877
Tsp45I	GTSAC	1 cut(s)	707
TspDTI	ATGAA	8 cut(s)	17, 786, 960, 1205, 1216, 1325, 1382, 1416
TspGWI	ACGGA	3 cut(s)	420, 830, 1225
TspRI	CASTG	1 cut(s)	593
Tth111I	GACNNNGTC	1 cut(s)	544
VpaK11BI	GGWCC	2 cut(s)	566, 596
VspI	ATTAAT	2 cut(s)	804, 1473
XagI	CCTNNNNNAGG	1 cut(s)	668
XbaI	TCTAGA	1 cut(s)	548
XceI	RCATGY	2 cut(s)	989, 1059
XmiI	GTMKAC	1 cut(s)	1130
XspI	CTAG	9 cut(s)	102, 131, 230, 269, 326, 549, 593, 600, 1026
ZrmI	AGTACT	2 cut(s)	228, 634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.