Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0009296

Physical Location & Seq

Genomic Coordinates Reverse (-)

48133399 .. 48137889

Gene Structure 4491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00366290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGAAGATCAACGTCAATCAAATGACTCGCCGAGTCGAGGTCGACAATCGCTACCCTCTCCGATTCTACTACCGCATCGCCGATAATCTCCTCAAACAGGCTAGTATATACCGTGAGGAGAAGAACATTATAGAGTTGTATGTCATACTGGTCCGATTTTCGAGTTTGGTGTCTGAAACTATACCGTGTCATCGAGACTATCAGGCGATTCTTCCGAAAGAGAGGAGTCTATATAAGAAGAAACTGTTGAGTGTACTGGATGAGCTCGAGTCTTTGAAGCCAGAATTCCAACGCCGTGTCAGTGAACATAATGAGGCTGCTGCAGCTTCTCAGCTTCCTGAACTTGAAAGCACTTCCTATGGCTTGCAGACGTCTTCTTTAGAATGGCCTCCTGTGAACAATAAATCATTGAGCATGAATGTTAGGCAGCCTGCTAGCCTGACATCTCAGTCATCATGGAAGTATAAAAATGATTTTTCACGGGGTACAACAAGTACTGTACAAATCGACAAGCAGTTCCAGAATCTCCTCAATCAGGCTGTACAATATGATCTTGTGGGAGTAAAAGAAGGTGATCCAGGTGGGGTGAATTCTACCATGGAATCAGTGCTCTCGTTGGACAATGGTGATTGGCTACGCCCTGCTCGGGAATCATGTCCTTCATGGATTAGTGAAGCAAAGGAAGATCCTTTTCCATTGGTCAAACAACCTTCTCCTCCTCCTGTTCTTGCTCGAGTGCAGCAGGAAATGGCTCCAATTCATCCTTCAAAAGTGGCAGATCCAAGACCAGGACCTGCAAGTCCATCTCAGGATGGGATGCCAAGTTCTAATTCATATCAGCATTTACACGTTAAAAACAAGGTTTTTCATATCACTACGCTAATAATCCCAAAGCAAGAGTCAACTTCTGATTCGTGTCAAACATTGAATGAGGAAGAAATATTTGAGGTTCAAGACAGACTATCTCTTTTTCCTCTTGGGTGGATTCATACACACCCATCACAGACCTGTTTCATGTCATCAGTTGATCTGCACACTCATTACTCATACCAGATTATGTTACCAGAAGCAATTGCAATTGTTATGGCTCCAACAGACACATCCAGTCCACATGGCATATTTCACTTATCTGACCCAGGTGGTGTGTCCGTTATTCGTAACTGTCAACAGCGTGGATTTCATCCTCATGAGGAGCCTTCGGATGGAACCTCAATATATGAGCATTGTTCTCACGTGTATATTAATTCTAATTTGAAGATCGATGTTGTTGATCTGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006464 GO:0006508 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0016579 GO:0019538 GO:0031224 GO:0031410 GO:0031982 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033043 GO:0033157 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044088 GO:0044090 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046907 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070201 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:0071840 GO:0090087 GO:0090316 GO:0097708 GO:0098657 GO:1901564 GO:1903827 GO:1903829 GO:1904951

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

426

Amino Acids

48.25

Weight (kDa)

5.98

Isoelectric Point (pI)

57.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP8_dimer	PF08969	6 - 99	1.6e-13	USP8 dimerisation domain
JAB	PF01398	285 - 356	4.9e-11	JAB1/Mov34/MPN/PAD-1 ubiquitin protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16144
fragaria_vesca	FvH4_4g19320 FvH4_4g19320 FvH4_4g19320
malus_domestica	MD13G1157700.v1.1 MD16G1158700.v1.1
prunus_persica	Prupe.1G125200_v2.0.a1
pyrus_communis	pycom13g13500 pycom16g13350
rosa_chinensis	RchiOBHm_Chr4g0424341
rosa_laevigata	RLG00000007483
rosa_multiflora	Rmu_sc0005995.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366290
rosa_rugosa	Rorug04G0196100 Rorug04G0196200 Rorug04G0196300 Rorug04G0196400
rosa_samantha	Rh4AG252900 Rh4BG258300 Rh4CG269300 Rh4DG252700
rosa_wichuraiana	Rw4G021810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	448, 798
AatII	GACGTC	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	802
AccI	GTMKAC	1 cut(s)	42
AciI	CCGC	2 cut(s)	73, 1276
AclWI	GGATC	3 cut(s)	569, 680, 773
AcsI	RAATTY	2 cut(s)	284, 589
AcvI	CACGTG	1 cut(s)	1234
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	5 cut(s)	255, 487, 496, 501, 543
AfiI	CCNNNNNNNGG	6 cut(s)	37, 97, 535, 646, 788, 1202
AflIII	ACRYGT	2 cut(s)	847, 1233
AgsI	TTSAA	6 cut(s)	277, 347, 768, 928, 953, 1255
AjnI	CCWGG	3 cut(s)	577, 787, 1135
AjuI	GAANNNNNNNTTGG	4 cut(s)	748, 780, 814, 846
AloI	GAACNNNNNNTCC	2 cut(s)	808, 840
AluBI	AGCT	3 cut(s)	265, 326, 334
AluI	AGCT	3 cut(s)	265, 326, 334
Alw21I	GWGCWC	2 cut(s)	267, 612
Alw26I	GTCTC	1 cut(s)	189
AlwI	GGATC	3 cut(s)	569, 680, 773
AlwNI	CAGNNNCTG	1 cut(s)	794
Ama87I	CYCGRG	3 cut(s)	266, 645, 732
AoxI	GGCC	1 cut(s)	386
ApeKI	GCWGC	5 cut(s)	317, 320, 323, 427, 739
ApoI	RAATTY	2 cut(s)	284, 589
ArsI	GACNNNNNNTTYG	2 cut(s)	884, 916
AseI	ATTAAT	1 cut(s)	1242
AspS9I	GGNCC	2 cut(s)	151, 791
AsuHPI	GGTGA	3 cut(s)	584, 598, 638
AsuNHI	GCTAGC	1 cut(s)	434
AvaI	CYCGRG	3 cut(s)	266, 645, 732
AvaII	GGWCC	2 cut(s)	151, 791
BanII	GRGCYC	1 cut(s)	267
BbrPI	CACGTG	1 cut(s)	1234
BbsI	GAAGAC	1 cut(s)	366
Bbv12I	GWGCWC	2 cut(s)	267, 612
BbvI	GCAGC	5 cut(s)	304, 307, 335, 439, 751
BccI	CCATC	4 cut(s)	806, 811, 1006, 1196
BceAI	ACGGC	1 cut(s)	279
BciT130I	CCWGG	3 cut(s)	579, 789, 1137
BcoDI	GTCTC	1 cut(s)	189
BfaI	CTAG	2 cut(s)	102, 435
BfmI	CTRYAG	1 cut(s)	321
BfuAI	ACCTGC	1 cut(s)	802
BisI	GCNGC	5 cut(s)	318, 321, 324, 428, 740
BlsI	GCNGC	5 cut(s)	319, 322, 325, 429, 741
BmcAI	AGTACT	1 cut(s)	496
Bme1390I	CCNGG	3 cut(s)	579, 789, 1137
Bme18I	GGWCC	2 cut(s)	151, 791
BmeT110I	CYCGRG	3 cut(s)	266, 645, 732
BmgT120I	GGNCC	2 cut(s)	151, 791
BmiI	GGNNCC	4 cut(s)	753, 1089, 1194, 1207
BmrFI	CCNGG	3 cut(s)	579, 789, 1137
BmsI	GCATC	2 cut(s)	84, 807
BmtI	GCTAGC	1 cut(s)	438
BpiI	GAAGAC	1 cut(s)	366
Bsa29I	ATCGAT	1 cut(s)	1260
BsaAI	YACGTR	1 cut(s)	1234
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	2 cut(s)	597, 1135
Bsc4I	CCNNNNNNNGG	6 cut(s)	37, 97, 535, 646, 788, 1202
Bse1I	ACTGG	3 cut(s)	153, 261, 1104
BseBI	CCWGG	3 cut(s)	579, 789, 1137
BseCI	ATCGAT	1 cut(s)	1260
BseDI	CCNNGG	2 cut(s)	597, 1135
BseGI	GGATG	7 cut(s)	265, 760, 817, 822, 1100, 1180, 1207
BseLI	CCNNNNNNNGG	6 cut(s)	37, 97, 535, 646, 788, 1202
BseMII	CTCAG	3 cut(s)	344, 461, 821
BseNI	ACTGG	3 cut(s)	153, 261, 1104
BseRI	GAGGAG	7 cut(s)	80, 131, 238, 518, 705, 708, 1205
BseXI	GCAGC	5 cut(s)	304, 307, 335, 439, 751
BsgI	GTGCAG	2 cut(s)	758, 1016
BshFI	GGCC	1 cut(s)	388
BshVI	ATCGAT	1 cut(s)	1260
BsiHKAI	GWGCWC	2 cut(s)	267, 612
BsiHKCI	CYCGRG	3 cut(s)	266, 645, 732
BslI	CCNNNNNNNGG	6 cut(s)	37, 97, 535, 646, 788, 1202
BsmAI	GTCTC	1 cut(s)	189
BsnI	GGCC	1 cut(s)	388
BsoBI	CYCGRG	3 cut(s)	266, 645, 732
Bsp1286I	GDGCHC	2 cut(s)	267, 612
Bsp1407I	TGTACA	2 cut(s)	499, 541
Bsp143I	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
Bsp19I	CCATGG	1 cut(s)	597
BspACI	CCGC	2 cut(s)	73, 1276
BspANI	GGCC	1 cut(s)	388
BspCNI	CTCAG	3 cut(s)	343, 460, 820
BspDI	ATCGAT	1 cut(s)	1260
BspHI	TCATGA	1 cut(s)	1186
BspLI	GGNNCC	4 cut(s)	753, 1089, 1194, 1207
BspMAI	CTGCAG	1 cut(s)	325
BspMI	ACCTGC	1 cut(s)	802
BspOI	GCTAGC	1 cut(s)	438
BspPI	GGATC	3 cut(s)	569, 680, 773
BsrGI	TGTACA	2 cut(s)	499, 541
BsrI	ACTGG	3 cut(s)	153, 261, 1104
BssECI	CCNNGG	2 cut(s)	597, 1135
BssMI	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
BssNI	GRCGYC	1 cut(s)	371
BssT1I	CCWWGG	1 cut(s)	597
Bst2UI	CCWGG	3 cut(s)	579, 789, 1137
Bst4CI	ACNGT	5 cut(s)	113, 186, 246, 499, 1163
BstACI	GRCGYC	1 cut(s)	371
BstAUI	TGTACA	2 cut(s)	499, 541
BstBAI	YACGTR	1 cut(s)	1234
BstC8I	GCNNGC	3 cut(s)	365, 432, 436
BstDEI	CTNAG	3 cut(s)	330, 447, 807
BstDSI	CCRYGG	1 cut(s)	597
BstENI	CCTNNNNNAGG	2 cut(s)	95, 533
BstF5I	GGATG	7 cut(s)	265, 760, 817, 822, 1100, 1180, 1207
BstKTI	GATC	8 cut(s)	9, 553, 577, 688, 781, 1030, 1260, 1273
BstMAI	GTCTC	1 cut(s)	189
BstMBI	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
BstMWI	GCNNNNNNNGC	1 cut(s)	323
BstNI	CCWGG	3 cut(s)	579, 789, 1137
BstSCI	CCNGG	3 cut(s)	577, 787, 1135
BstSFI	CTRYAG	1 cut(s)	321
BstV1I	GCAGC	5 cut(s)	304, 307, 335, 439, 751
BstV2I	GAAGAC	1 cut(s)	366
BstX2I	RGATCY	2 cut(s)	685, 778
BstYI	RGATCY	2 cut(s)	685, 778
Bsu15I	ATCGAT	1 cut(s)	1260
BsuRI	GGCC	1 cut(s)	388
BsuTUI	ATCGAT	1 cut(s)	1260
BtgI	CCRYGG	1 cut(s)	597
BtgZI	GCGATG	1 cut(s)	61
BtsCI	GGATG	7 cut(s)	265, 760, 817, 822, 1100, 1180, 1207
BtsIMutI	CAGTG	2 cut(s)	307, 612
BveI	ACCTGC	1 cut(s)	802
Cac8I	GCNNGC	3 cut(s)	365, 432, 436
CaiI	CAGNNNCTG	1 cut(s)	794
CciI	TCATGA	1 cut(s)	1186
Cfr13I	GGNCC	2 cut(s)	151, 791
ClaI	ATCGAT	1 cut(s)	1260
Csp6I	GTAC	5 cut(s)	254, 486, 495, 500, 542
CviAII	CATG	8 cut(s)	415, 456, 598, 654, 663, 1015, 1112, 1187
CviQI	GTAC	5 cut(s)	254, 486, 495, 500, 542
DdeI	CTNAG	3 cut(s)	330, 447, 807
DpnI	GATC	8 cut(s)	8, 552, 576, 687, 780, 1029, 1259, 1272
DpnII	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
DrdI	GACNNNNNNGTC	2 cut(s)	448, 798
DseDI	GACNNNNNNGTC	2 cut(s)	448, 798
Ecl136II	GAGCTC	1 cut(s)	265
Eco130I	CCWWGG	1 cut(s)	597
Eco24I	GRGCYC	1 cut(s)	267
Eco47I	GGWCC	2 cut(s)	151, 791
Eco53kI	GAGCTC	1 cut(s)	265
Eco72I	CACGTG	1 cut(s)	1234
Eco88I	CYCGRG	3 cut(s)	266, 645, 732
EcoICRI	GAGCTC	1 cut(s)	265
EcoNI	CCTNNNNNAGG	2 cut(s)	95, 533
EcoO109I	RGGNCCY	1 cut(s)	791
EcoRI	GAATTC	2 cut(s)	284, 589
EcoRII	CCWGG	3 cut(s)	577, 787, 1135
EcoT14I	CCWWGG	1 cut(s)	597
EcoT38I	GRGCYC	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	597
FaeI	CATG	8 cut(s)	418, 459, 601, 657, 666, 1018, 1115, 1190
FatI	CATG	8 cut(s)	414, 455, 597, 653, 662, 1014, 1111, 1186
FblI	GTMKAC	1 cut(s)	42
Fnu4HI	GCNGC	5 cut(s)	318, 321, 324, 428, 740
FokI	GGATG	7 cut(s)	272, 747, 824, 829, 1087, 1167, 1214
FriOI	GRGCYC	1 cut(s)	267
Fsp4HI	GCNGC	5 cut(s)	318, 321, 324, 428, 740
FspBI	CTAG	2 cut(s)	102, 435
GluI	GCNGC	5 cut(s)	318, 321, 324, 428, 740
HaeIII	GGCC	1 cut(s)	388
Hin1I	GRCGYC	1 cut(s)	371
Hin1II	CATG	8 cut(s)	418, 459, 601, 657, 666, 1018, 1115, 1190
HincII	GTYRAC	3 cut(s)	43, 903, 1166
HindII	GTYRAC	3 cut(s)	43, 903, 1166
HphI	GGTGA	3 cut(s)	584, 598, 638
Hpy166II	GTNNAC	7 cut(s)	43, 254, 305, 397, 903, 1109, 1166
Hpy188I	TCNGA	7 cut(s)	62, 155, 175, 216, 910, 1132, 1201
Hpy188III	TCNNGA	7 cut(s)	194, 338, 520, 647, 809, 953, 1187
Hpy8I	GTNNAC	7 cut(s)	43, 254, 305, 397, 903, 1109, 1166
HpyAV	CCTTC	5 cut(s)	563, 669, 720, 774, 1206
HpyCH4III	ACNGT	5 cut(s)	113, 186, 246, 499, 1163
HpyCH4IV	ACGT	4 cut(s)	12, 371, 849, 1233
HpyCH4V	TGCA	6 cut(s)	323, 367, 739, 797, 1033, 1076
HpyF10VI	GCNNNNNNNGC	1 cut(s)	323
HpyF3I	CTNAG	3 cut(s)	330, 447, 807
HpySE526I	ACGT	4 cut(s)	12, 371, 849, 1233
Hsp92I	GRCGYC	1 cut(s)	371
Hsp92II	CATG	8 cut(s)	418, 459, 601, 657, 666, 1018, 1115, 1190
Kzo9I	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
LmnI	GCTCC	3 cut(s)	757, 1093, 1192
Lsp1109I	GCAGC	5 cut(s)	304, 307, 335, 439, 751
LweI	GCATC	2 cut(s)	84, 807
MaeI	CTAG	2 cut(s)	102, 435
MaeII	ACGT	4 cut(s)	12, 371, 849, 1233
MaeIII	GTNAC	2 cut(s)	1059, 1157
MalI	GATC	8 cut(s)	8, 552, 576, 687, 780, 1029, 1259, 1272
MboI	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
MboII	GAAGA	8 cut(s)	16, 133, 203, 250, 366, 695, 947, 1267
MfeI	CAATTG	2 cut(s)	1071, 1077
MflI	RGATCY	2 cut(s)	685, 778
MhlI	GDGCHC	2 cut(s)	267, 612
MluCI	AATT	8 cut(s)	284, 589, 756, 829, 1071, 1077, 1243, 1249
MlyI	GAGTC	5 cut(s)	19, 42, 235, 278, 908
MmeI	TCCRAC	3 cut(s)	313, 597, 1115
MseI	TTAA	2 cut(s)	852, 1242
MslI	CAYNNNNRTG	1 cut(s)	1185
MspR9I	CCNGG	3 cut(s)	579, 789, 1137
MunI	CAATTG	2 cut(s)	1071, 1077
MvaI	CCWGG	3 cut(s)	579, 789, 1137
MwoI	GCNNNNNNNGC	1 cut(s)	323
NcoI	CCATGG	1 cut(s)	597
NdeII	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
NheI	GCTAGC	1 cut(s)	434
NlaIII	CATG	8 cut(s)	418, 459, 601, 657, 666, 1018, 1115, 1190
NlaIV	GGNNCC	4 cut(s)	753, 1089, 1194, 1207
NmeAIII	GCCGAG	1 cut(s)	56
PaeR7I	CTCGAG	2 cut(s)	266, 732
PagI	TCATGA	1 cut(s)	1186
PfeI	GAWTC	7 cut(s)	63, 208, 523, 602, 650, 911, 985
PkrI	GCNGC	5 cut(s)	319, 322, 325, 429, 741
PleI	GAGTC	5 cut(s)	19, 41, 234, 277, 907
PmaCI	CACGTG	1 cut(s)	1234
PmlI	CACGTG	1 cut(s)	1234
PpsI	GAGTC	5 cut(s)	19, 41, 234, 277, 907
Ppu21I	YACGTR	1 cut(s)	1234
PpuMI	RGGWCCY	1 cut(s)	791
PshBI	ATTAAT	1 cut(s)	1242
Psp124BI	GAGCTC	1 cut(s)	267
Psp5II	RGGWCCY	1 cut(s)	791
Psp6I	CCWGG	3 cut(s)	577, 787, 1135
PspCI	CACGTG	1 cut(s)	1234
PspGI	CCWGG	3 cut(s)	577, 787, 1135
PspN4I	GGNNCC	4 cut(s)	753, 1089, 1194, 1207
PspPI	GGNCC	2 cut(s)	151, 791
PspPPI	RGGWCCY	1 cut(s)	791
PspXI	VCTCGAGB	2 cut(s)	266, 732
PstI	CTGCAG	1 cut(s)	325
PstNI	CAGNNNCTG	1 cut(s)	794
PsuI	RGATCY	2 cut(s)	685, 778
RsaI	GTAC	5 cut(s)	255, 487, 496, 501, 543
RsaNI	GTAC	5 cut(s)	254, 486, 495, 500, 542
RseI	CAYNNNNRTG	1 cut(s)	1185
SacI	GAGCTC	1 cut(s)	267
SalI	GTCGAC	1 cut(s)	41
SaqAI	TTAA	2 cut(s)	852, 1242
SatI	GCNGC	5 cut(s)	318, 321, 324, 428, 740
Sau3AI	GATC	8 cut(s)	6, 550, 574, 685, 778, 1027, 1257, 1270
Sau96I	GGNCC	2 cut(s)	151, 791
ScaI	AGTACT	1 cut(s)	496
SchI	GAGTC	5 cut(s)	19, 42, 235, 278, 908
ScrFI	CCNGG	3 cut(s)	579, 789, 1137
SduI	GDGCHC	2 cut(s)	267, 612
SfaNI	GCATC	2 cut(s)	84, 807
SfcI	CTRYAG	1 cut(s)	321
Sfr274I	CTCGAG	2 cut(s)	266, 732
SinI	GGWCC	2 cut(s)	151, 791
SlaI	CTCGAG	2 cut(s)	266, 732
SmiMI	CAYNNNNRTG	1 cut(s)	1185
SmlI	CTYRAG	2 cut(s)	266, 732
SmoI	CTYRAG	2 cut(s)	266, 732
Sse9I	AATT	8 cut(s)	284, 589, 756, 829, 1071, 1077, 1243, 1249
SsiI	CCGC	2 cut(s)	73, 1276
SspI	AATATT	1 cut(s)	942
SspMI	CTAG	2 cut(s)	102, 435
SstI	GAGCTC	1 cut(s)	267
StyD4I	CCNGG	3 cut(s)	577, 787, 1135
StyI	CCWWGG	1 cut(s)	597
TaaI	ACNGT	5 cut(s)	113, 186, 246, 499, 1163
TaiI	ACGT	4 cut(s)	15, 374, 852, 1236
TaqI	TCGA	8 cut(s)	36, 42, 161, 193, 267, 507, 733, 1260
TasI	AATT	8 cut(s)	284, 589, 756, 829, 1071, 1077, 1243, 1249
TatI	WGTACW	4 cut(s)	253, 494, 499, 541
TfiI	GAWTC	7 cut(s)	63, 208, 523, 602, 650, 911, 985
Tru1I	TTAA	2 cut(s)	852, 1242
Tru9I	TTAA	2 cut(s)	852, 1242
TscAI	CASTG	2 cut(s)	307, 612
TseI	GCWGC	5 cut(s)	317, 320, 323, 427, 739
TspDTI	ATGAA	9 cut(s)	17, 431, 651, 749, 822, 857, 977, 1003, 1169
TspGWI	ACGGA	1 cut(s)	1138
TspRI	CASTG	2 cut(s)	307, 612
VpaK11BI	GGWCC	2 cut(s)	151, 791
VspI	ATTAAT	1 cut(s)	1242
XagI	CCTNNNNNAGG	2 cut(s)	95, 533
XapI	RAATTY	2 cut(s)	284, 589
XhoI	CTCGAG	2 cut(s)	266, 732
XmiI	GTMKAC	1 cut(s)	42
XspI	CTAG	2 cut(s)	102, 435
ZraI	GACGTC	1 cut(s)	372
ZrmI	AGTACT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.