Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009296

Physical Location & Seq

Genomic Coordinates Reverse (-)

34156627 .. 34158220

Gene Structure 1594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0196400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGTCGCAACACCGCTTCATTATGGTAACATTTCCCACTCAAGGCCACATCAATCCTTCCCTCCAACTCGCCAAGCGTCTTATTCACATCACCGGTGCACATGTAACGATTGTCACGTCCCTCTCCGCCCACCTCCGCATTGGCAATAGCATAAGTACTCCTAGTGGCTTGACCTTCGCCCCCTTTTCCGATGGATACGACCAAGGGCTTAGGTTTTCGGACATAACTCAGGACTTCATGTCCGAGTTAAAGCGTCGCGGCAAGCAAGCGATCAAGGATCTTGTAGAGTCTAGTGCAAGCAAGGGCCACCCTTACACTTGCATATTGTGCACCTTACTTCTTCCTTGGGTGGCGGAACTGGCACGTGAACTCCACCTCCCAACCGCGCTCCTTTGGATTCAGCCAGCCACAGTGTTCGACATATACTACTACTACTTCAACGGCTACAAAGATCTCATCAACGTCAATACTGCTGCTAATAGTGACCCTTCCTATGCAGTAGAAATACCAGGATTGCCGCTAGCGCTGAAGAGCCGCGACCTTCCTTCCTTCATTGTCGCTACGAATCCGTACAGAGGAGCTCTCCCATTGTTCGAAGAACAGTTTGAGAAGCTCGGACAAGAAAGCAGGCCAATCATACTTGTGAACACGTTCGATGCACTGGAACCAGAGGCGTTGAAAGCAATAGACAAGTACAACTTGATCGGAATCGGGCCTTTAATGCCATCGGCTTTCTTGGACGGCAAGGATCCGTCCGATAAATCATTCGGAGGCGATCTTTTCCAGAAGTCGAAGGACTCAGCTTACCTGGAATGGCTGAACTCAAAGCCAGACGATTCTGTCGTCTACGTCGCGTTTGGGAGCGTTGCCGTGCTGTCCAAGATTCAAATGGAGGAAATTGCAAAAGGGTTGTTGAATTTCGGACGTCCGTTTCTGTGGGTGATTAGAGAAAACGAAAAGAGTGGAGAAGGTAAGGAAGAGAAAGAAGACGAGGAGCTGAGTTGCAGAGAGGAACTAGAAGAGCTTGGGATGATAGTCCCGTGGTGTAGTCAAGTGGAGGTTCTTTCAAATCCTTCATTGGGTTGTTTTGTGACACATTGTGGCTGGAATTCAAGCTTGGAGAGTTTGGTTTCTGGGGTACCAGTGGTAGCCTTTCCTCTGTGGACAGACCAAGGCACAAATGCCAAATTGATAGAGGACATGTGGAAAACAGGGGTGAGGGTAGCACTGAATGCGGAGGGTGTTGTTGTGGGTGAGGAGCTCAAGAGGTGTCTGGATTTGGTCATGAGAAGTGAAGAGTTGAGAAGCAATGCTAAGAAGTGGAAGGAGTTGGCGAGAGAGGCTGTGAGTGAAGGTGGATCTTCTGACAACAATCTCAAGGCATTTTTGGATGATATTGGAGGTGGCTGTTATCTAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006464 GO:0006508 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0016579 GO:0019538 GO:0031224 GO:0031410 GO:0031982 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033043 GO:0033157 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044088 GO:0044090 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046907 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070201 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:0071840 GO:0090087 GO:0090316 GO:0097708 GO:0098657 GO:1901564 GO:1903827 GO:1903829 GO:1904951

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

473

Amino Acids

52.36

Weight (kDa)

5.04

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	268 - 440	2.6e-23	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16144
fragaria_vesca	FvH4_4g19320 FvH4_4g19320 FvH4_4g19320
malus_domestica	MD13G1157700.v1.1 MD16G1158700.v1.1
prunus_persica	Prupe.1G125200_v2.0.a1
pyrus_communis	pycom13g13500 pycom16g13350
rosa_chinensis	RchiOBHm_Chr4g0424341
rosa_laevigata	RLG00000007483
rosa_multiflora	Rmu_sc0005995.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366290
rosa_rugosa	Rorug04G0196100 Rorug04G0196200 Rorug04G0196300 Rorug04G0196400
rosa_samantha	Rh4AG252900 Rh4BG258300 Rh4CG269300 Rh4DG252700
rosa_wichuraiana	Rw4G021810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	839
AatII	GACGTC	1 cut(s)	928
Acc65I	GGTACC	1 cut(s)	1138
AccB1I	GGYRCC	1 cut(s)	1138
AccI	GTMKAC	1 cut(s)	846
AccII	CGCG	4 cut(s)	258, 386, 537, 854
AciI	CCGC	9 cut(s)	13, 126, 136, 258, 353, 384, 518, 535, 1235
AclWI	GGATC	4 cut(s)	285, 743, 756, 1366
AcsI	RAATTY	2 cut(s)	916, 1108
AcuI	CTGAAG	1 cut(s)	548
AcvI	CACGTG	1 cut(s)	365
AcyI	GRCGYC	1 cut(s)	925
AdeI	CACNNNGTG	1 cut(s)	1100
AfaI	GTAC	4 cut(s)	157, 572, 695, 1140
AfeI	AGCGCT	1 cut(s)	525
AfiI	CCNNNNNNNGG	3 cut(s)	41, 575, 1079
AflIII	ACRYGT	3 cut(s)	100, 648, 1200
AgeI	ACCGGT	1 cut(s)	92
AgsI	TTSAA	6 cut(s)	439, 679, 887, 916, 1068, 1113
AhdI	GACNNNNNGTC	1 cut(s)	238
AjiI	CACGTC	1 cut(s)	117
AjnI	CCWGG	2 cut(s)	508, 807
AjuI	GAANNNNNNNTTGG	2 cut(s)	1100, 1132
AloI	GAACNNNNNNTCC	2 cut(s)	360, 392
AluBI	AGCT	7 cut(s)	581, 613, 803, 997, 1024, 1116, 1261
AluI	AGCT	7 cut(s)	581, 613, 803, 997, 1024, 1116, 1261
Alw21I	GWGCWC	4 cut(s)	100, 332, 583, 1263
Alw44I	GTGCAC	2 cut(s)	96, 328
AlwI	GGATC	4 cut(s)	285, 743, 756, 1366
Aor51HI	AGCGCT	1 cut(s)	525
AoxI	GGCC	4 cut(s)	43, 304, 629, 713
ApaLI	GTGCAC	2 cut(s)	96, 328
ApeKI	GCWGC	1 cut(s)	473
ApoI	RAATTY	2 cut(s)	916, 1108
AsiGI	ACCGGT	1 cut(s)	92
Asp700I	GAANNNNTTC	1 cut(s)	650
Asp718I	GGTACC	1 cut(s)	1138
AspLEI	GCGC	2 cut(s)	388, 526
AspS9I	GGNCC	2 cut(s)	304, 713
AsuHPI	GGTGA	4 cut(s)	82, 952, 1228, 1265
AsuII	TTCGAA	1 cut(s)	594
AsuNHI	GCTAGC	1 cut(s)	520
BaeGI	GKGCMC	2 cut(s)	100, 332
BamHI	GGATCC	1 cut(s)	748
BanI	GGYRCC	1 cut(s)	1138
BanII	GRGCYC	2 cut(s)	583, 1263
BbrPI	CACGTG	1 cut(s)	365
BbsI	GAAGAC	1 cut(s)	993
Bbv12I	GWGCWC	4 cut(s)	100, 332, 583, 1263
BbvI	GCAGC	1 cut(s)	460
BccI	CCATC	2 cut(s)	185, 733
BceAI	ACGGC	3 cut(s)	457, 757, 854
BciT130I	CCWGG	2 cut(s)	510, 809
BciVI	GTATCC	1 cut(s)	188
BfaI	CTAG	5 cut(s)	162, 291, 521, 1016, 1415
BfoI	RGCGCY	1 cut(s)	527
BfuI	GTATCC	1 cut(s)	188
BglII	AGATCT	1 cut(s)	451
BisI	GCNGC	4 cut(s)	259, 474, 518, 535
BlsI	GCNGC	4 cut(s)	260, 475, 519, 536
BmcAI	AGTACT	1 cut(s)	157
Bme1390I	CCNGG	2 cut(s)	510, 809
BmeRI	GACNNNNNGTC	1 cut(s)	238
BmgBI	CACGTC	1 cut(s)	117
BmgT120I	GGNCC	2 cut(s)	304, 713
BmiI	GGNNCC	3 cut(s)	666, 750, 1140
BmrFI	CCNGG	2 cut(s)	510, 809
BmsI	GCATC	1 cut(s)	646
BmtI	GCTAGC	1 cut(s)	524
BpiI	GAAGAC	1 cut(s)	993
BplI	GAGNNNNNCTC	2 cut(s)	567, 599
Bpu10I	CCTNAGC	1 cut(s)	209
Bpu14I	TTCGAA	1 cut(s)	594
BpuEI	CTTGAG	3 cut(s)	24, 1247, 1361
BsaAI	YACGTR	1 cut(s)	365
BsaBI	GATNNNNATC	1 cut(s)	707
BsaHI	GRCGYC	1 cut(s)	925
BsaJI	CCNNGG	4 cut(s)	202, 344, 1040, 1171
BsaWI	WCCGGW	1 cut(s)	92
BsaXI	ACNNNNNCTCC	4 cut(s)	354, 360, 384, 390
Bsc4I	CCNNNNNNNGG	3 cut(s)	41, 575, 1079
Bse118I	RCCGGY	1 cut(s)	92
Bse1I	ACTGG	3 cut(s)	363, 666, 1142
Bse3DI	GCAATG	1 cut(s)	1315
Bse8I	GATNNNNATC	1 cut(s)	707
BseBI	CCWGG	2 cut(s)	510, 809
BseDI	CCNNGG	4 cut(s)	202, 344, 1040, 1171
BseGI	GGATG	2 cut(s)	1035, 1396
BseJI	GATNNNNATC	1 cut(s)	707
BseLI	CCNNNNNNNGG	3 cut(s)	41, 575, 1079
BseMI	GCAATG	1 cut(s)	1315
BseMII	CTCAG	3 cut(s)	242, 813, 989
BseNI	ACTGG	3 cut(s)	363, 666, 1142
BseRI	GAGGAG	3 cut(s)	591, 1007, 1271
BseSI	GKGCMC	2 cut(s)	100, 332
BseXI	GCAGC	1 cut(s)	460
Bsh1236I	CGCG	4 cut(s)	258, 386, 537, 854
BshFI	GGCC	4 cut(s)	45, 306, 631, 715
BshNI	GGYRCC	1 cut(s)	1138
BshTI	ACCGGT	1 cut(s)	92
BsiHKAI	GWGCWC	4 cut(s)	100, 332, 583, 1263
BsiSI	CCGG	1 cut(s)	93
BslFI	GGGAC	2 cut(s)	103, 1022
BslI	CCNNNNNNNGG	3 cut(s)	41, 575, 1079
BsmFI	GGGAC	2 cut(s)	103, 1022
BsmI	GAATGC	1 cut(s)	1237
BsnI	GGCC	4 cut(s)	45, 306, 631, 715
Bsp119I	TTCGAA	1 cut(s)	594
Bsp1286I	GDGCHC	4 cut(s)	100, 332, 583, 1263
Bsp143I	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
BspACI	CCGC	9 cut(s)	13, 126, 136, 258, 353, 384, 518, 535, 1235
BspANI	GGCC	4 cut(s)	45, 306, 631, 715
BspCNI	CTCAG	3 cut(s)	241, 812, 990
BspFNI	CGCG	4 cut(s)	258, 386, 537, 854
BspHI	TCATGA	1 cut(s)	1284
BspLI	GGNNCC	3 cut(s)	666, 750, 1140
BspOI	GCTAGC	1 cut(s)	524
BspPI	GGATC	4 cut(s)	285, 743, 756, 1366
BspQI	GCTCTTC	2 cut(s)	524, 1014
BspT104I	TTCGAA	1 cut(s)	594
BspT107I	GGYRCC	1 cut(s)	1138
BsrDI	GCAATG	1 cut(s)	1315
BsrFI	RCCGGY	1 cut(s)	92
BsrI	ACTGG	3 cut(s)	363, 666, 1142
BssAI	RCCGGY	1 cut(s)	92
BssECI	CCNNGG	4 cut(s)	202, 344, 1040, 1171
BssMI	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
BssNI	GRCGYC	1 cut(s)	925
BssT1I	CCWWGG	3 cut(s)	202, 344, 1171
Bst2UI	CCWGG	2 cut(s)	510, 809
Bst4CI	ACNGT	2 cut(s)	412, 603
Bst6I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
BstACI	GRCGYC	1 cut(s)	925
BstAPI	GCANNNNNTGC	2 cut(s)	327, 1232
BstBAI	YACGTR	1 cut(s)	365
BstBI	TTCGAA	1 cut(s)	594
BstC8I	GCNNGC	6 cut(s)	263, 267, 298, 405, 522, 629
BstDEI	CTNAG	5 cut(s)	209, 228, 799, 998, 1314
BstDSI	CCRYGG	1 cut(s)	1040
BstF5I	GGATG	2 cut(s)	1035, 1396
BstFNI	CGCG	4 cut(s)	258, 386, 537, 854
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	2 cut(s)	388, 526
BstKTI	GATC	7 cut(s)	273, 280, 454, 705, 751, 778, 1361
BstMBI	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
BstMWI	GCNNNNNNNGC	7 cut(s)	327, 359, 523, 680, 721, 1232, 1340
BstNI	CCWGG	2 cut(s)	510, 809
BstNSI	RCATGY	2 cut(s)	104, 1204
BstSCI	CCNGG	2 cut(s)	508, 807
BstSLI	GKGCMC	2 cut(s)	100, 332
BstUI	CGCG	4 cut(s)	258, 386, 537, 854
BstV1I	GCAGC	1 cut(s)	460
BstV2I	GAAGAC	1 cut(s)	993
BstX2I	RGATCY	4 cut(s)	277, 451, 748, 1358
BstYI	RGATCY	4 cut(s)	277, 451, 748, 1358
BsuI	GTATCC	1 cut(s)	188
BsuRI	GGCC	4 cut(s)	45, 306, 631, 715
BtgI	CCRYGG	1 cut(s)	1040
BtrI	CACGTC	1 cut(s)	117
BtsCI	GGATG	2 cut(s)	1035, 1396
BtsIMutI	CAGTG	4 cut(s)	417, 659, 1149, 1226
Cac8I	GCNNGC	6 cut(s)	263, 267, 298, 405, 522, 629
CciI	TCATGA	1 cut(s)	1284
CfoI	GCGC	2 cut(s)	388, 526
Cfr10I	RCCGGY	1 cut(s)	92
Cfr13I	GGNCC	2 cut(s)	304, 713
CseI	GACGC	2 cut(s)	65, 242
Csp6I	GTAC	4 cut(s)	156, 571, 694, 1139
CspAI	ACCGGT	1 cut(s)	92
CviAII	CATG	4 cut(s)	101, 238, 1201, 1285
CviQI	GTAC	4 cut(s)	156, 571, 694, 1139
DdeI	CTNAG	5 cut(s)	209, 228, 799, 998, 1314
DpnI	GATC	7 cut(s)	272, 279, 453, 704, 750, 777, 1360
DpnII	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
DraIII	CACNNNGTG	1 cut(s)	1100
DrdI	GACNNNNNNGTC	1 cut(s)	839
DriI	GACNNNNNGTC	1 cut(s)	238
DseDI	GACNNNNNNGTC	1 cut(s)	839
Eam1104I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
Eam1105I	GACNNNNNGTC	1 cut(s)	238
EarI	CTCTTC	4 cut(s)	524, 972, 1014, 1290
EciI	GGCGGA	2 cut(s)	115, 368
Ecl136II	GAGCTC	2 cut(s)	581, 1261
Eco130I	CCWWGG	3 cut(s)	202, 344, 1171
Eco24I	GRGCYC	2 cut(s)	583, 1263
Eco47III	AGCGCT	1 cut(s)	525
Eco53kI	GAGCTC	2 cut(s)	581, 1261
Eco57I	CTGAAG	1 cut(s)	548
Eco72I	CACGTG	1 cut(s)	365
EcoICRI	GAGCTC	2 cut(s)	581, 1261
EcoRI	GAATTC	1 cut(s)	1108
EcoRII	CCWGG	2 cut(s)	508, 807
EcoT14I	CCWWGG	3 cut(s)	202, 344, 1171
EcoT38I	GRGCYC	2 cut(s)	583, 1263
ErhI	CCWWGG	3 cut(s)	202, 344, 1171
FaeI	CATG	4 cut(s)	104, 241, 1204, 1288
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	2 cut(s)	103, 1022
FatI	CATG	4 cut(s)	100, 237, 1200, 1284
FblI	GTMKAC	1 cut(s)	846
Fnu4HI	GCNGC	4 cut(s)	259, 474, 518, 535
FokI	GGATG	2 cut(s)	1042, 1403
FriOI	GRGCYC	2 cut(s)	583, 1263
Fsp4HI	GCNGC	4 cut(s)	259, 474, 518, 535
FspBI	CTAG	5 cut(s)	162, 291, 521, 1016, 1415
GlaI	GCGC	2 cut(s)	387, 525
GluI	GCNGC	4 cut(s)	259, 474, 518, 535
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	4 cut(s)	45, 306, 631, 715
HapII	CCGG	1 cut(s)	93
HgaI	GACGC	2 cut(s)	65, 242
HhaI	GCGC	2 cut(s)	388, 526
Hin1I	GRCGYC	1 cut(s)	925
Hin1II	CATG	4 cut(s)	104, 241, 1204, 1288
Hin6I	GCGC	2 cut(s)	386, 524
HinP1I	GCGC	2 cut(s)	386, 524
HindIII	AAGCTT	1 cut(s)	1114
HinfI	GANTC	7 cut(s)	287, 397, 565, 708, 797, 836, 883
HpaII	CCGG	1 cut(s)	93
HphI	GGTGA	4 cut(s)	82, 952, 1228, 1265
Hpy166II	GTNNAC	6 cut(s)	98, 330, 368, 646, 847, 1164
Hpy188I	TCNGA	9 cut(s)	190, 220, 244, 617, 707, 757, 770, 923, 1366
Hpy188III	TCNNGA	5 cut(s)	230, 784, 1264, 1274, 1285
Hpy8I	GTNNAC	6 cut(s)	98, 330, 368, 646, 847, 1164
Hpy99I	CGWCG	2 cut(s)	258, 854
HpyCH4III	ACNGT	2 cut(s)	412, 603
HpyCH4IV	ACGT	6 cut(s)	116, 364, 462, 650, 849, 925
HpyCH4V	TGCA	8 cut(s)	98, 296, 321, 330, 497, 659, 902, 1005
HpyF10VI	GCNNNNNNNGC	7 cut(s)	327, 359, 523, 680, 721, 1232, 1340
HpyF3I	CTNAG	5 cut(s)	209, 228, 799, 998, 1314
HpySE526I	ACGT	6 cut(s)	116, 364, 462, 650, 849, 925
Hsp92I	GRCGYC	1 cut(s)	925
Hsp92II	CATG	4 cut(s)	104, 241, 1204, 1288
HspAI	GCGC	2 cut(s)	386, 524
KpnI	GGTACC	1 cut(s)	1142
Kzo9I	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
LguI	GCTCTTC	2 cut(s)	524, 1014
LmnI	GCTCC	5 cut(s)	393, 578, 861, 994, 1258
Lsp1109I	GCAGC	1 cut(s)	460
LweI	GCATC	1 cut(s)	646
MaeI	CTAG	5 cut(s)	162, 291, 521, 1016, 1415
MaeII	ACGT	6 cut(s)	116, 364, 462, 650, 849, 925
MaeIII	GTNAC	5 cut(s)	25, 103, 112, 482, 1090
MalI	GATC	7 cut(s)	272, 279, 453, 704, 750, 777, 1360
MboI	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
MboII	GAAGA	8 cut(s)	332, 541, 608, 989, 998, 1031, 1307, 1353
MflI	RGATCY	4 cut(s)	277, 451, 748, 1358
MhlI	GDGCHC	4 cut(s)	100, 332, 583, 1263
MluCI	AATT	4 cut(s)	897, 916, 1108, 1187
MlyI	GAGTC	2 cut(s)	296, 791
MmeI	TCCRAC	1 cut(s)	88
MroXI	GAANNNNTTC	1 cut(s)	650
MseI	TTAA	2 cut(s)	248, 719
MslI	CAYNNNNRTG	1 cut(s)	641
MspI	CCGG	1 cut(s)	93
MspR9I	CCNGG	2 cut(s)	510, 809
Mva1269I	GAATGC	1 cut(s)	1237
MvaI	CCWGG	2 cut(s)	510, 809
MvnI	CGCG	4 cut(s)	258, 386, 537, 854
MwoI	GCNNNNNNNGC	7 cut(s)	327, 359, 523, 680, 721, 1232, 1340
NdeII	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
NheI	GCTAGC	1 cut(s)	520
NlaIII	CATG	4 cut(s)	104, 241, 1204, 1288
NlaIV	GGNNCC	3 cut(s)	666, 750, 1140
NmuCI	GTSAC	3 cut(s)	112, 482, 1090
NspI	RCATGY	2 cut(s)	104, 1204
NspV	TTCGAA	1 cut(s)	594
PagI	TCATGA	1 cut(s)	1284
PciI	ACATGT	2 cut(s)	100, 1200
PciSI	GCTCTTC	2 cut(s)	524, 1014
PcsI	WCGNNNNNNNCGW	2 cut(s)	113, 840
PctI	GAATGC	1 cut(s)	1237
PdmI	GAANNNNTTC	1 cut(s)	650
PfeI	GAWTC	5 cut(s)	397, 565, 708, 836, 883
PinAI	ACCGGT	1 cut(s)	92
PkrI	GCNGC	4 cut(s)	260, 475, 519, 536
PleI	GAGTC	2 cut(s)	295, 791
PmaCI	CACGTG	1 cut(s)	365
PmlI	CACGTG	1 cut(s)	365
PpsI	GAGTC	2 cut(s)	295, 791
Ppu21I	YACGTR	1 cut(s)	365
PscI	ACATGT	2 cut(s)	100, 1200
Psp124BI	GAGCTC	2 cut(s)	583, 1263
Psp6I	CCWGG	2 cut(s)	508, 807
PspCI	CACGTG	1 cut(s)	365
PspGI	CCWGG	2 cut(s)	508, 807
PspN4I	GGNNCC	3 cut(s)	666, 750, 1140
PspPI	GGNCC	2 cut(s)	304, 713
PsuI	RGATCY	4 cut(s)	277, 451, 748, 1358
RsaI	GTAC	4 cut(s)	157, 572, 695, 1140
RsaNI	GTAC	4 cut(s)	156, 571, 694, 1139
RseI	CAYNNNNRTG	1 cut(s)	641
SacI	GAGCTC	2 cut(s)	583, 1263
SapI	GCTCTTC	2 cut(s)	524, 1014
SaqAI	TTAA	2 cut(s)	248, 719
SatI	GCNGC	4 cut(s)	259, 474, 518, 535
Sau3AI	GATC	7 cut(s)	270, 277, 451, 702, 748, 775, 1358
Sau96I	GGNCC	2 cut(s)	304, 713
ScaI	AGTACT	1 cut(s)	157
SchI	GAGTC	2 cut(s)	296, 791
ScrFI	CCNGG	2 cut(s)	510, 809
SduI	GDGCHC	4 cut(s)	100, 332, 583, 1263
SfaNI	GCATC	1 cut(s)	646
SfuI	TTCGAA	1 cut(s)	594
SgrAI	CRCCGGYG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	641
SmlI	CTYRAG	3 cut(s)	39, 1262, 1376
SmoI	CTYRAG	3 cut(s)	39, 1262, 1376
Sse9I	AATT	4 cut(s)	897, 916, 1108, 1187
SsiI	CCGC	9 cut(s)	13, 126, 136, 258, 353, 384, 518, 535, 1235
SspMI	CTAG	5 cut(s)	162, 291, 521, 1016, 1415
SstI	GAGCTC	2 cut(s)	583, 1263
StyD4I	CCNGG	2 cut(s)	508, 807
StyI	CCWWGG	3 cut(s)	202, 344, 1171
TaaI	ACNGT	2 cut(s)	412, 603
TaiI	ACGT	6 cut(s)	119, 367, 465, 653, 852, 928
TaqI	TCGA	4 cut(s)	417, 594, 654, 791
TasI	AATT	4 cut(s)	897, 916, 1108, 1187
TatI	WGTACW	2 cut(s)	155, 693
TauI	GCSGC	3 cut(s)	261, 520, 537
TfiI	GAWTC	5 cut(s)	397, 565, 708, 836, 883
Tru1I	TTAA	2 cut(s)	248, 719
Tru9I	TTAA	2 cut(s)	248, 719
TscAI	CASTG	4 cut(s)	417, 666, 1149, 1233
TseFI	GTSAC	3 cut(s)	112, 482, 1090
TseI	GCWGC	1 cut(s)	473
Tsp45I	GTSAC	3 cut(s)	112, 482, 1090
TspDTI	ATGAA	4 cut(s)	7, 226, 541, 1065
TspGWI	ACGGA	3 cut(s)	558, 741, 918
TspRI	CASTG	4 cut(s)	417, 666, 1149, 1233
VneI	GTGCAC	2 cut(s)	96, 328
XapI	RAATTY	2 cut(s)	916, 1108
XceI	RCATGY	2 cut(s)	104, 1204
XcmI	CCANNNNNNNNNTGG	2 cut(s)	137, 886
XmiI	GTMKAC	1 cut(s)	846
XmnI	GAANNNNTTC	1 cut(s)	650
XspI	CTAG	5 cut(s)	162, 291, 521, 1016, 1415
ZraI	GACGTC	1 cut(s)	926
ZrmI	AGTACT	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.