Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009296

Physical Location & Seq

Genomic Coordinates Reverse (-)

34145861 .. 34148087

Gene Structure 2227 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0196200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGACGCAACACCGCTTCATTATGGTAACATTTCCCACTCAAGGCCACATCAATCCTTCCCTGCAACTTGCCAAGCGTCTCATTCACATCACCGGTGCACATGTAACGTTTGTCACGTCCCTCTCCGCCCACCTCCGAATTGGTGATAGCATCAGTACTCCTAGTGGCTTGACTTTCGCCCCCTTTTCCGATGGATACGATCAAGGATTTAGGTCCGCGGATAGTACTCAGCATTTCATGTCTGAGCTAAAGCGTCGCGGAGAGCAAGCAATCACAGATCTTGTAGTGTCTAGTGCAAACGAGGGCCACCCTTACACTTGCATATTGTGCACCTTACTTCTTCCTTGGGTGGCGGAACTGGCACGTGAACTCAACCTCCCAACAGCGGTTGTTTGGATTCAGCCAGCCACAGTGTTCGACATATACTACTACTACTTCAACGGCTACAAAGATCTCATCAACATCAATACTGCTGCTAATAGTGACCCTTCCTATGCAGTAGAAATGCCAGGATTGCCGCTAGCGCTGAAGAGCCGCGACCTTCCTTCCTTCATTGTTGCTACGAATCCGTACAGCGGAGCTCTCTCATTGTTCGAAGAACAGTTTGAGAAGCTCGGACAAGAAAGCAGGCCAATTATACTTGTGAACACGTTCGATGCACTAGAACCAGAGGCGTTGAAAGCAATAGACAAGTACAACTTGATCGGAATCGGGCCTTTAATGCCATCGGCTTTCTTGGACGGCAAGGATCCGTCCGATAAATCATTCGGAGGCGATCTTTTCCCGAAGTCGAAGGACTCAACGTACCTGGAATGGCTGAACTCAAAGCCAGACGAGTCTGTCGTCTACGTCTCGTTTGGGAGCATTTCCGTGCTGTCCAAGATTCAAATGGAGGAAATTGCAAAAGGGTTGTTGGATTCCGGACGTCCGTTTCTGTGGGTGATTAGAGAAAACGAAAAGAGTGGAGAAGGTAAGGAAGAGAAAGAAGACGAGGAGCTGAGTTGCAGAGAGGAACTAGAAGAGCTTGGGATGATAGTCCCATGGTGTAATCAAGTGGAGGTTCTTTCGAATCCTTCATTGGGTTGTTTTGTGACACATTGTGGCTGGAATTCAAGCTTGGAGAGTTTGGTTTGTGGGGTACCTGTGGTGGCATTTCCCCAGTGGACAGACCAAGGCACAAATGCCAAGTTGATAGAGGACATGTGGAAAACAGGGATGAGGGTAGCACCGAATGAGGAGGGTGTTGTTGTGGGTGAGGAGCTCAAGAGGTGTCTGGATTTGGTCATGGGAAGTGAAGAGTTGAGAAGCAATGCTTTGAAATGGAAGGACTTGGCAAGAGAGGCTGTTAGTGAAGGTGGATCTTCTGATAACAATCTCAAGGCATTTTTGGATGACATTGGAGGTGGCTGTTTGCCAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006464 GO:0006508 GO:0006807 GO:0006810 GO:0006897 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0016579 GO:0019538 GO:0031224 GO:0031410 GO:0031982 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033043 GO:0033157 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044088 GO:0044090 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046907 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070201 GO:0070536 GO:0070646 GO:0070647 GO:0071108 GO:0071704 GO:0071840 GO:0090087 GO:0090316 GO:0097708 GO:0098657 GO:1901564 GO:1903827 GO:1903829 GO:1904951

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

JAB USP8_dimer

Protein Analysis

473

Amino Acids

52.18

Weight (kDa)

4.71

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	269 - 441	8.9e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16144
fragaria_vesca	FvH4_4g19320 FvH4_4g19320 FvH4_4g19320
malus_domestica	MD13G1157700.v1.1 MD16G1158700.v1.1
prunus_persica	Prupe.1G125200_v2.0.a1
pyrus_communis	pycom13g13500 pycom16g13350
rosa_chinensis	RchiOBHm_Chr4g0424341
rosa_laevigata	RLG00000007483
rosa_multiflora	Rmu_sc0005995.1_g000011
rosa_roxburghii	Rroxscaffold_5G00366290
rosa_rugosa	Rorug04G0196100 Rorug04G0196200 Rorug04G0196300 Rorug04G0196400
rosa_samantha	Rh4AG252900 Rh4BG258300 Rh4CG269300 Rh4DG252700
rosa_wichuraiana	Rw4G021810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	839
AatII	GACGTC	1 cut(s)	928
Acc65I	GGTACC	1 cut(s)	1138
AccB1I	GGYRCC	1 cut(s)	1138
AccI	GTMKAC	1 cut(s)	846
AccII	CGCG	3 cut(s)	218, 258, 537
AccIII	TCCGGA	1 cut(s)	920
AclI	AACGTT	1 cut(s)	107
AclWI	GGATC	3 cut(s)	743, 756, 1366
AcsI	RAATTY	1 cut(s)	1108
AcuI	CTGAAG	1 cut(s)	548
AcvI	CACGTG	1 cut(s)	365
AcyI	GRCGYC	1 cut(s)	925
AdeI	CACNNNGTG	1 cut(s)	1100
AfaI	GTAC	6 cut(s)	157, 226, 572, 695, 806, 1140
AfeI	AGCGCT	1 cut(s)	525
AfiI	CCNNNNNNNGG	4 cut(s)	41, 385, 575, 1079
AflIII	ACRYGT	3 cut(s)	100, 648, 1200
AgeI	ACCGGT	1 cut(s)	92
AgsI	TTSAA	5 cut(s)	439, 679, 887, 1113, 1318
AjiI	CACGTC	1 cut(s)	117
AjnI	CCWGG	2 cut(s)	508, 807
AjuI	GAANNNNNNNTTGG	4 cut(s)	1061, 1093, 1100, 1132
AloI	GAACNNNNNNTCC	2 cut(s)	360, 392
AluBI	AGCT	7 cut(s)	247, 581, 613, 997, 1024, 1116, 1261
AluI	AGCT	7 cut(s)	247, 581, 613, 997, 1024, 1116, 1261
Alw21I	GWGCWC	4 cut(s)	100, 332, 583, 1263
Alw26I	GTCTC	2 cut(s)	83, 856
Alw44I	GTGCAC	2 cut(s)	96, 328
AlwI	GGATC	3 cut(s)	743, 756, 1366
Aor13HI	TCCGGA	1 cut(s)	920
Aor51HI	AGCGCT	1 cut(s)	525
AoxI	GGCC	4 cut(s)	43, 304, 629, 713
ApaLI	GTGCAC	2 cut(s)	96, 328
ApeKI	GCWGC	1 cut(s)	473
ApoI	RAATTY	1 cut(s)	1108
AsiGI	ACCGGT	1 cut(s)	92
Asp700I	GAANNNNTTC	1 cut(s)	650
Asp718I	GGTACC	1 cut(s)	1138
AspLEI	GCGC	1 cut(s)	526
AspS9I	GGNCC	3 cut(s)	213, 304, 713
AsuHPI	GGTGA	4 cut(s)	82, 155, 952, 1265
AsuII	TTCGAA	2 cut(s)	594, 1067
AsuNHI	GCTAGC	1 cut(s)	520
AvaII	GGWCC	1 cut(s)	213
BaeGI	GKGCMC	2 cut(s)	100, 332
BamHI	GGATCC	1 cut(s)	748
BanI	GGYRCC	1 cut(s)	1138
BanII	GRGCYC	2 cut(s)	583, 1263
BbrPI	CACGTG	1 cut(s)	365
BbsI	GAAGAC	1 cut(s)	993
Bbv12I	GWGCWC	4 cut(s)	100, 332, 583, 1263
BbvI	GCAGC	1 cut(s)	460
BccI	CCATC	2 cut(s)	185, 733
BceAI	ACGGC	2 cut(s)	457, 757
BciT130I	CCWGG	2 cut(s)	510, 809
BciVI	GTATCC	1 cut(s)	188
BcoDI	GTCTC	2 cut(s)	83, 856
BfaI	CTAG	5 cut(s)	162, 291, 521, 662, 1016
BfoI	RGCGCY	1 cut(s)	527
BfuI	GTATCC	1 cut(s)	188
BglII	AGATCT	2 cut(s)	277, 451
BisI	GCNGC	3 cut(s)	474, 518, 535
BlsI	GCNGC	3 cut(s)	475, 519, 536
BmcAI	AGTACT	2 cut(s)	157, 226
Bme1390I	CCNGG	2 cut(s)	510, 809
Bme18I	GGWCC	1 cut(s)	213
BmgBI	CACGTC	1 cut(s)	117
BmgT120I	GGNCC	3 cut(s)	213, 304, 713
BmiI	GGNNCC	2 cut(s)	750, 1140
BmrFI	CCNGG	2 cut(s)	510, 809
BmrI	ACTGGG	1 cut(s)	1153
BmsI	GCATC	2 cut(s)	159, 646
BmtI	GCTAGC	1 cut(s)	524
BmuI	ACTGGG	1 cut(s)	1153
BpiI	GAAGAC	1 cut(s)	993
Bpu14I	TTCGAA	2 cut(s)	594, 1067
BpuEI	CTTGAG	3 cut(s)	24, 1247, 1361
BsaAI	YACGTR	1 cut(s)	365
BsaBI	GATNNNNATC	2 cut(s)	707, 1371
BsaHI	GRCGYC	1 cut(s)	925
BsaJI	CCNNGG	4 cut(s)	216, 344, 1040, 1171
BsaWI	WCCGGW	2 cut(s)	92, 920
BsaXI	ACNNNNNCTCC	2 cut(s)	360, 390
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 385, 575, 1079
Bse118I	RCCGGY	1 cut(s)	92
Bse1I	ACTGG	2 cut(s)	363, 1159
Bse3DI	GCAATG	1 cut(s)	1315
Bse8I	GATNNNNATC	2 cut(s)	707, 1371
BseAI	TCCGGA	1 cut(s)	920
BseBI	CCWGG	2 cut(s)	510, 809
BseDI	CCNNGG	4 cut(s)	216, 344, 1040, 1171
BseGI	GGATG	3 cut(s)	1035, 1221, 1396
BseJI	GATNNNNATC	2 cut(s)	707, 1371
BseLI	CCNNNNNNNGG	4 cut(s)	41, 385, 575, 1079
BseMI	GCAATG	1 cut(s)	1315
BseMII	CTCAG	3 cut(s)	234, 242, 989
BseNI	ACTGG	2 cut(s)	363, 1159
BseRI	GAGGAG	3 cut(s)	1007, 1250, 1271
BseSI	GKGCMC	2 cut(s)	100, 332
BseXI	GCAGC	1 cut(s)	460
Bsh1236I	CGCG	3 cut(s)	218, 258, 537
BshFI	GGCC	4 cut(s)	45, 306, 631, 715
BshNI	GGYRCC	1 cut(s)	1138
BshTI	ACCGGT	1 cut(s)	92
BsiHKAI	GWGCWC	4 cut(s)	100, 332, 583, 1263
BsiSI	CCGG	2 cut(s)	93, 921
BslFI	GGGAC	2 cut(s)	103, 1022
BslI	CCNNNNNNNGG	4 cut(s)	41, 385, 575, 1079
BsmAI	GTCTC	2 cut(s)	83, 856
BsmBI	CGTCTC	2 cut(s)	83, 856
BsmFI	GGGAC	2 cut(s)	103, 1022
BsnI	GGCC	4 cut(s)	45, 306, 631, 715
Bsp119I	TTCGAA	2 cut(s)	594, 1067
Bsp1286I	GDGCHC	4 cut(s)	100, 332, 583, 1263
Bsp13I	TCCGGA	1 cut(s)	920
Bsp143I	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
Bsp19I	CCATGG	1 cut(s)	1040
BspANI	GGCC	4 cut(s)	45, 306, 631, 715
BspCNI	CTCAG	3 cut(s)	235, 241, 990
BspEI	TCCGGA	1 cut(s)	920
BspFNI	CGCG	3 cut(s)	218, 258, 537
BspLI	GGNNCC	2 cut(s)	750, 1140
BspOI	GCTAGC	1 cut(s)	524
BspPI	GGATC	3 cut(s)	743, 756, 1366
BspQI	GCTCTTC	2 cut(s)	524, 1014
BspT104I	TTCGAA	2 cut(s)	594, 1067
BspT107I	GGYRCC	1 cut(s)	1138
BsrDI	GCAATG	1 cut(s)	1315
BsrFI	RCCGGY	1 cut(s)	92
BsrI	ACTGG	2 cut(s)	363, 1159
BssAI	RCCGGY	1 cut(s)	92
BssECI	CCNNGG	4 cut(s)	216, 344, 1040, 1171
BssMI	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
BssNI	GRCGYC	1 cut(s)	925
BssT1I	CCWWGG	3 cut(s)	344, 1040, 1171
Bst2UI	CCWGG	2 cut(s)	510, 809
Bst4CI	ACNGT	2 cut(s)	412, 603
Bst6I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
BstACI	GRCGYC	1 cut(s)	925
BstAPI	GCANNNNNTGC	1 cut(s)	327
BstBAI	YACGTR	1 cut(s)	365
BstBI	TTCGAA	2 cut(s)	594, 1067
BstC8I	GCNNGC	5 cut(s)	267, 405, 522, 629, 1416
BstDEI	CTNAG	3 cut(s)	228, 243, 998
BstDSI	CCRYGG	2 cut(s)	216, 1040
BstF5I	GGATG	3 cut(s)	1035, 1221, 1396
BstFNI	CGCG	3 cut(s)	218, 258, 537
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	1 cut(s)	526
BstKTI	GATC	7 cut(s)	202, 280, 454, 705, 751, 778, 1361
BstMAI	GTCTC	2 cut(s)	83, 856
BstMBI	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
BstMWI	GCNNNNNNNGC	7 cut(s)	327, 359, 514, 523, 680, 721, 1340
BstNI	CCWGG	2 cut(s)	510, 809
BstNSI	RCATGY	2 cut(s)	104, 1204
BstSCI	CCNGG	2 cut(s)	508, 807
BstSLI	GKGCMC	2 cut(s)	100, 332
BstUI	CGCG	3 cut(s)	218, 258, 537
BstV1I	GCAGC	1 cut(s)	460
BstV2I	GAAGAC	1 cut(s)	993
BstX2I	RGATCY	4 cut(s)	277, 451, 748, 1358
BstYI	RGATCY	4 cut(s)	277, 451, 748, 1358
BsuI	GTATCC	1 cut(s)	188
BsuRI	GGCC	4 cut(s)	45, 306, 631, 715
BtgI	CCRYGG	2 cut(s)	216, 1040
BtrI	CACGTC	1 cut(s)	117
BtsCI	GGATG	3 cut(s)	1035, 1221, 1396
BtsIMutI	CAGTG	2 cut(s)	417, 1166
Cac8I	GCNNGC	5 cut(s)	267, 405, 522, 629, 1416
CfoI	GCGC	1 cut(s)	526
Cfr10I	RCCGGY	1 cut(s)	92
Cfr13I	GGNCC	3 cut(s)	213, 304, 713
Cfr42I	CCGCGG	1 cut(s)	219
CseI	GACGC	3 cut(s)	13, 65, 242
Csp6I	GTAC	6 cut(s)	156, 225, 571, 694, 805, 1139
CspAI	ACCGGT	1 cut(s)	92
CviAII	CATG	5 cut(s)	101, 238, 1041, 1201, 1285
CviQI	GTAC	6 cut(s)	156, 225, 571, 694, 805, 1139
DdeI	CTNAG	3 cut(s)	228, 243, 998
DpnI	GATC	7 cut(s)	201, 279, 453, 704, 750, 777, 1360
DpnII	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
DraIII	CACNNNGTG	1 cut(s)	1100
DrdI	GACNNNNNNGTC	1 cut(s)	839
DseDI	GACNNNNNNGTC	1 cut(s)	839
Eam1104I	CTCTTC	4 cut(s)	524, 972, 1014, 1290
EarI	CTCTTC	4 cut(s)	524, 972, 1014, 1290
EciI	GGCGGA	2 cut(s)	115, 368
Ecl136II	GAGCTC	2 cut(s)	581, 1261
Eco130I	CCWWGG	3 cut(s)	344, 1040, 1171
Eco24I	GRGCYC	2 cut(s)	583, 1263
Eco47I	GGWCC	1 cut(s)	213
Eco47III	AGCGCT	1 cut(s)	525
Eco53kI	GAGCTC	2 cut(s)	581, 1261
Eco57I	CTGAAG	1 cut(s)	548
Eco72I	CACGTG	1 cut(s)	365
EcoICRI	GAGCTC	2 cut(s)	581, 1261
EcoRI	GAATTC	1 cut(s)	1108
EcoRII	CCWGG	2 cut(s)	508, 807
EcoT14I	CCWWGG	3 cut(s)	344, 1040, 1171
EcoT38I	GRGCYC	2 cut(s)	583, 1263
ErhI	CCWWGG	3 cut(s)	344, 1040, 1171
Esp3I	CGTCTC	2 cut(s)	83, 856
FaeI	CATG	5 cut(s)	104, 241, 1044, 1204, 1288
FalI	AAGNNNNNCTT	4 cut(s)	683, 715, 1297, 1329
FaqI	GGGAC	2 cut(s)	103, 1022
FatI	CATG	5 cut(s)	100, 237, 1040, 1200, 1284
FblI	GTMKAC	1 cut(s)	846
Fnu4HI	GCNGC	3 cut(s)	474, 518, 535
FokI	GGATG	3 cut(s)	1042, 1228, 1403
FriOI	GRGCYC	2 cut(s)	583, 1263
Fsp4HI	GCNGC	3 cut(s)	474, 518, 535
FspBI	CTAG	5 cut(s)	162, 291, 521, 662, 1016
GlaI	GCGC	1 cut(s)	525
GluI	GCNGC	3 cut(s)	474, 518, 535
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	4 cut(s)	45, 306, 631, 715
HapII	CCGG	2 cut(s)	93, 921
HgaI	GACGC	3 cut(s)	13, 65, 242
HhaI	GCGC	1 cut(s)	526
Hin1I	GRCGYC	1 cut(s)	925
Hin1II	CATG	5 cut(s)	104, 241, 1044, 1204, 1288
Hin6I	GCGC	1 cut(s)	524
HinP1I	GCGC	1 cut(s)	524
HindIII	AAGCTT	1 cut(s)	1114
HinfI	GANTC	8 cut(s)	397, 565, 708, 797, 836, 883, 917, 1069
HpaII	CCGG	2 cut(s)	93, 921
HphI	GGTGA	4 cut(s)	82, 155, 952, 1265
Hpy166II	GTNNAC	6 cut(s)	98, 330, 368, 646, 847, 1164
Hpy188I	TCNGA	8 cut(s)	137, 190, 244, 617, 707, 757, 770, 1366
Hpy188III	TCNNGA	4 cut(s)	784, 921, 1264, 1274
Hpy8I	GTNNAC	6 cut(s)	98, 330, 368, 646, 847, 1164
Hpy99I	CGWCG	1 cut(s)	258
HpyCH4III	ACNGT	2 cut(s)	412, 603
HpyCH4IV	ACGT	7 cut(s)	107, 116, 364, 650, 803, 849, 925
HpyCH4V	TGCA	9 cut(s)	64, 98, 296, 321, 330, 497, 659, 902, 1005
HpyF10VI	GCNNNNNNNGC	7 cut(s)	327, 359, 514, 523, 680, 721, 1340
HpyF3I	CTNAG	3 cut(s)	228, 243, 998
HpySE526I	ACGT	7 cut(s)	107, 116, 364, 650, 803, 849, 925
Hsp92I	GRCGYC	1 cut(s)	925
Hsp92II	CATG	5 cut(s)	104, 241, 1044, 1204, 1288
HspAI	GCGC	1 cut(s)	524
Kpn2I	TCCGGA	1 cut(s)	920
KpnI	GGTACC	1 cut(s)	1142
KspI	CCGCGG	1 cut(s)	219
Kzo9I	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
LguI	GCTCTTC	2 cut(s)	524, 1014
LmnI	GCTCC	4 cut(s)	578, 861, 994, 1258
Lsp1109I	GCAGC	1 cut(s)	460
LweI	GCATC	2 cut(s)	159, 646
MaeI	CTAG	5 cut(s)	162, 291, 521, 662, 1016
MaeII	ACGT	7 cut(s)	107, 116, 364, 650, 803, 849, 925
MaeIII	GTNAC	5 cut(s)	25, 103, 112, 482, 1090
MalI	GATC	7 cut(s)	201, 279, 453, 704, 750, 777, 1360
MboI	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
MboII	GAAGA	8 cut(s)	332, 541, 608, 989, 998, 1031, 1307, 1353
MflI	RGATCY	4 cut(s)	277, 451, 748, 1358
MhlI	GDGCHC	4 cut(s)	100, 332, 583, 1263
MluCI	AATT	4 cut(s)	138, 633, 897, 1108
MlyI	GAGTC	2 cut(s)	791, 845
MmeI	TCCRAC	1 cut(s)	894
MroI	TCCGGA	1 cut(s)	920
MroXI	GAANNNNTTC	1 cut(s)	650
MseI	TTAA	1 cut(s)	719
MslI	CAYNNNNRTG	1 cut(s)	869
MspA1I	CMGCKG	3 cut(s)	218, 386, 576
MspI	CCGG	2 cut(s)	93, 921
MspR9I	CCNGG	2 cut(s)	510, 809
MvaI	CCWGG	2 cut(s)	510, 809
MvnI	CGCG	3 cut(s)	218, 258, 537
MwoI	GCNNNNNNNGC	7 cut(s)	327, 359, 514, 523, 680, 721, 1340
NcoI	CCATGG	1 cut(s)	1040
NdeII	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
NheI	GCTAGC	1 cut(s)	520
NlaIII	CATG	5 cut(s)	104, 241, 1044, 1204, 1288
NlaIV	GGNNCC	2 cut(s)	750, 1140
NmuCI	GTSAC	3 cut(s)	112, 482, 1090
NspI	RCATGY	2 cut(s)	104, 1204
NspV	TTCGAA	2 cut(s)	594, 1067
PciI	ACATGT	2 cut(s)	100, 1200
PciSI	GCTCTTC	2 cut(s)	524, 1014
PcsI	WCGNNNNNNNCGW	2 cut(s)	113, 840
PdmI	GAANNNNTTC	1 cut(s)	650
PfeI	GAWTC	6 cut(s)	397, 565, 708, 883, 917, 1069
PinAI	ACCGGT	1 cut(s)	92
PkrI	GCNGC	3 cut(s)	475, 519, 536
PleI	GAGTC	2 cut(s)	791, 844
PmaCI	CACGTG	1 cut(s)	365
PmlI	CACGTG	1 cut(s)	365
PpsI	GAGTC	2 cut(s)	791, 844
Ppu21I	YACGTR	1 cut(s)	365
PscI	ACATGT	2 cut(s)	100, 1200
Psp124BI	GAGCTC	2 cut(s)	583, 1263
Psp1406I	AACGTT	1 cut(s)	107
Psp6I	CCWGG	2 cut(s)	508, 807
PspCI	CACGTG	1 cut(s)	365
PspGI	CCWGG	2 cut(s)	508, 807
PspN4I	GGNNCC	2 cut(s)	750, 1140
PspPI	GGNCC	3 cut(s)	213, 304, 713
PsuI	RGATCY	4 cut(s)	277, 451, 748, 1358
RsaI	GTAC	6 cut(s)	157, 226, 572, 695, 806, 1140
RsaNI	GTAC	6 cut(s)	156, 225, 571, 694, 805, 1139
RseI	CAYNNNNRTG	1 cut(s)	869
SacI	GAGCTC	2 cut(s)	583, 1263
SacII	CCGCGG	1 cut(s)	219
SapI	GCTCTTC	2 cut(s)	524, 1014
SaqAI	TTAA	1 cut(s)	719
SatI	GCNGC	3 cut(s)	474, 518, 535
Sau3AI	GATC	7 cut(s)	199, 277, 451, 702, 748, 775, 1358
Sau96I	GGNCC	3 cut(s)	213, 304, 713
ScaI	AGTACT	2 cut(s)	157, 226
SchI	GAGTC	2 cut(s)	791, 845
ScrFI	CCNGG	2 cut(s)	510, 809
SduI	GDGCHC	4 cut(s)	100, 332, 583, 1263
SfaNI	GCATC	2 cut(s)	159, 646
Sfr303I	CCGCGG	1 cut(s)	219
SfuI	TTCGAA	2 cut(s)	594, 1067
SgrAI	CRCCGGYG	1 cut(s)	92
SgrBI	CCGCGG	1 cut(s)	219
SinI	GGWCC	1 cut(s)	213
SmiMI	CAYNNNNRTG	1 cut(s)	869
SmlI	CTYRAG	3 cut(s)	39, 1262, 1376
SmoI	CTYRAG	3 cut(s)	39, 1262, 1376
Sse9I	AATT	4 cut(s)	138, 633, 897, 1108
SspMI	CTAG	5 cut(s)	162, 291, 521, 662, 1016
SstI	GAGCTC	2 cut(s)	583, 1263
StyD4I	CCNGG	2 cut(s)	508, 807
StyI	CCWWGG	3 cut(s)	344, 1040, 1171
TaaI	ACNGT	2 cut(s)	412, 603
TaiI	ACGT	7 cut(s)	110, 119, 367, 653, 806, 852, 928
TaqI	TCGA	5 cut(s)	417, 594, 654, 791, 1067
TasI	AATT	4 cut(s)	138, 633, 897, 1108
TatI	WGTACW	3 cut(s)	155, 224, 693
TauI	GCSGC	2 cut(s)	520, 537
TfiI	GAWTC	6 cut(s)	397, 565, 708, 883, 917, 1069
Tru1I	TTAA	1 cut(s)	719
Tru9I	TTAA	1 cut(s)	719
TscAI	CASTG	2 cut(s)	417, 1166
TseFI	GTSAC	3 cut(s)	112, 482, 1090
TseI	GCWGC	1 cut(s)	473
Tsp45I	GTSAC	3 cut(s)	112, 482, 1090
TspDTI	ATGAA	4 cut(s)	7, 226, 541, 1065
TspGWI	ACGGA	4 cut(s)	558, 741, 859, 918
TspRI	CASTG	2 cut(s)	417, 1166
VneI	GTGCAC	2 cut(s)	96, 328
VpaK11BI	GGWCC	1 cut(s)	213
XapI	RAATTY	1 cut(s)	1108
XceI	RCATGY	2 cut(s)	104, 1204
XcmI	CCANNNNNNNNNTGG	2 cut(s)	137, 886
XmiI	GTMKAC	1 cut(s)	846
XmnI	GAANNNNTTC	1 cut(s)	650
XspI	CTAG	5 cut(s)	162, 291, 521, 662, 1016
ZraI	GACGTC	1 cut(s)	926
ZrmI	AGTACT	2 cut(s)	157, 226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.