Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007937

Physical Location & Seq

Genomic Coordinates Forward (+)

11079184 .. 11089688

Gene Structure 10505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4818 bp

ATGGGTCTGAGTCTGGCTTGGATCTGGGCCATTAAGACCCAAATCATCCCTTCGCGTTTCAAAGAGCAAACCATCAGCAAGAAGGCACACTCTGAACACACAATGTACCCGGGATTTAGCAAGGCGTCAGGACCAACAGGACCGCCGGGATCGCGGCCACTATTCGGAAACTTCGGCAGCGGTCGGCCGCCTTCGCCTTCTCCGCCGACCAACCCTCCTTTTTCCGACGCTGCTCCGCTGCGTTCTCCGTCCAGGGGGCCTGAAGCTCCAGGGCAGCTGTATTCTCCTCCTTTAGGCTTTGGAAGAGTTCTTCCTGCTGCGAGTCAACCTTACCCTTCTGCAGGAGTCCATGGGGGGCCTGAAGCTCCAGGGCAGCTGCATTCACCTCATTTGGCCTTTGAAAGAGCTCGTCCTGCTGCAAGTCATTCTTACCCATCTGCAGGAGTCCATAGGTCCACAGATTCTCATCCTACTTGGGATGGTGGGCAGGGATCCTCCTTTAAGAATTATGATACCCAGGCTCATCAAAGGACATCTGCCGTCACATCATTTGTTGTTTCTCGTAATTCTGGAACTAGTGTTACTGCCAAGGTGTCCAGATTCCAAGACACTAAAGAGATCAGATCGCCTCCCTTTCTGTCTAAAGATGTCAATTTCAGAAATTCCACTCAAGTTGTCCCTAGAAGTCACTTAGTTACTCCGAGAATACGATCGCCTCCCTTGGTCTCTTATGAGGATTTGCATCCTTCTGTTGGAGTTGAAGAGCCTTCTGTATCTCCTATTGGGTTCAATAGTAGATCAAATACCAGTTTTAGTACTCCTGATTCTCGGGTACACAAAAAGTCTTTGCAACCTGCAAGCAATACTATTTCTGAAGCTGCTGCAAGAAATTTGACCAGCGTCCCGGTGGCCAAAAGAACAAGGTCACCTCCTTTACTTCCCGAGGATCAAGTGTTTCACGGAAACTCTTATGCCACTCAAGATGGTACTGAACGAGAAATGCAAGCCAAAGCTAAGCGGTTAGCCCGGTTCAAGGTTGAATTAAGTAAAACTCCACAAAACAATCCTGATATTGTAGAGCCAGGGGTTTCTGCAAATAGACATGAGCTATCTAATGTTGAGAGGAACAAATTAGCTGCATATAAATCTACCGAACTGGCTATGGATGGTACTGATGGCAATGCGTTACCTGAGGATGAAGGCGTGGAGTCGTCTGGTATCATTATTGGGTTGTGCCCGGATATGTGTCCTGAGTCAGAAAGGGCAGAACGAGAAAGGAAAGGGGATCTCGATCAATATGAGCGCTTGGATGGGGATAGAAATCAAACCAGCATGTCCCTTGCTGTTAAAAAGTATAACAGAACAGCTGAGCGAGATGCAAACCTGATACGACCAATGCGGATCCTGCAGAGGACAATTGATTATTTGCTCAATTTGCTTGATAAGCCTTACAATGATAAGTTTCTTAGCATATACAACTTCCTATGGGATCGAATGCGAGCAATTCGAATGGACTTGAGAATGCAGCACATTTTTAACCAAGAGGCTATTACTATGCTGGAGCAAATGATAAGACTTCACATAATTGTCATGCATGAATTATGTGAATACTCAAGAGGAGAGGGCTTTTCTGAGGGATTTGATGCACACCTCAATATCGAACAGATGAATAAAACATCTGTTGAATTGTTCCAATTGTATGATGATCACAGAAAGAAAGGAATAAACATTCCTACAGAAAAAGAGTTTCGAGGTTACTATGCCCTTCTCAAGCTGGACAAGCATCCTGGGTACATGGTTGAACCCGCAGAGCTCTCACTTGATCTTGCAAAGATGACTCCAGAAATAAGACAAACTTCAGAGGTGCTATTTGCGCGTGATGTAGCTAGAGCTTGCAGAACTGGTAATTTTATAGCTTTCTTTCGACTTGCGAGGAAAGCAAGTTACCTCCAAGCTTGCCTAATGCATGCTCACTTCTCAAAGTTACGAACCCAGGCACTTGCTTCTATACATGCAGGTCTCCAGAATAACCAAGGTCTCCCTATTGCGGATGCTGCCAAGTGGCTGGCAATGGAGGAAGATGAAATTGAAAGCCTTTCAGAGTATCACGGGTTTGCAATAAAGTCATTCCAAGAGCCATATATCGTGAAGGAAGGCCCATTTCTCAATGTTGATGAGGATTATCCTACCAAGTGTTCTAAACTGGTCAATATGAAAAAGTCAAGAAGGATAGTCAAGGATGTTTTGGGTTCTAGTCAAGTCATATCCTTGTCTTCTGAAGCAACAAAAGAAATTCTGATGACTAAGACAAAGAAGCCTGAACCAAAAAATATTTCATATGTTGAAAAGGAAAGTCCTGCTCGTCATGTCCCAGCCATTGAAGTAACAAAATCTGTTAGTGAAGTTGATGAAAAAAGGCCTAATTTTGAAGATGTTTCATCCCCAAAAGATATCAGACAAAAGAAGCAAATGATTCAAGCACCAATTTTTTCATCTCCAGAAGATGTCAGACAAAAGCAGCAAACGATTCAAACACCAATTTTTCGTCAATACAGTGAAGGTCCCCGTAGGGCATCTGCTGTGTCTCCTTCCTCGTGGGCTTTCTCATCATTTACACCCCAGCCTGATAAAGTTGATACCATGGAGAAGCCAAACTATGGTGCTCTTTTTAGTAACTCTCCAGAGGGACGCATGCATTCTGGAATGGAACAAATGCCATTGCAAATTGAGTCAAAAAAAGCTGTACAAGAGAGATCATCTGTTGGTACATATAGTTCCAGTATGGAATATCCAGTTTTCCAAAATATGGTCACCGATAAGTTGGAAGACGAGGAAATTCCAGACCTCCATCAGGTAGATGAAAACAATGATGTTATGGCGAATTCTCAACAGGAAGAAATTGAGGAGGCAAAACTCAAATTGATGCTAAGATTATGGAAGCGACGTTCTCTGAAGCTAAGAGCACTGCGAGAGAAAAAGCAGTTAGCAGCAAATGCTGCATTGAATTCTTTATCATTGGGGCCACCAATTCAACTCAAGAGAGATCAACCAAGCACTTCTGGCGAGTTTGACATTGATCTCGTTTTGAGGGAGAGATATAAAAAGCATGGTCAGTCATGGTCAAGACTTAATGTTTCAGATGTAATAGCAGATATACTAGGCAGAAGAAACCCGGATGCTAGATGCCTATGCTGGAAAACTGTTGTATGTTCTCAGATGAACAATCTAGAAGGTGATGAACTGGGGCAGAGGAGCCATGTCTCAGGAGCAGCCCCCTGGTTGCTTTCAAAGCTCATGCCTTCGGCAAATGATGTGGACGATGATGATGAGGATCTTGTAATTTCATCCCCTGGTGTCTCAATATGGAAGAAATGGGTTCGTGACCAATCTGGTTCAGATCTGAACTGCTGTTTGTCTGTGGTCAAGGATGCAAGTTCTGATAATCCAAGTGAAAGTGTATCCGGTGCAAGTGCTATTTTGTTTCTTACATCTGAAAGCATCCCTTGGAAATTGCAAAAAGACCGTCTTCGTAATCTTCTGATGTCGATACCTTACGGTTCCTGTTTGCCCCTTCTGATCTTAAGTGGCTCATACAAGAACAATGTTGATGACTCCACTATTGTCGATAATTTGGGTCTCCATGACTTGGATAAGTCACGAATAAGCAGCTTTCATGTTGTCCCGCTTGTTGAAAACCAATGGGATGGGTTTTTCAGTGACAACCGACTTAGGGAAGGGCTACGATGGCTTGCAAGTGAATCGCCCCTTCAACCCATTCTTCGTCATGTGAAAACACGCGAACTCATTCTTACCTACTTGAATTCTTCATTGGAGCCACTAGACAAAATGAAAGATTATGAAGTAGGTCCAGACAACTGTATCCTTGCCTTCAACAAAGCCTTGGATTGGTCACAGAAGAAAATTGCTGCTGCTGTGGAATCAAATCCATCCAGTTGGCCTTGCCCCGAGATTGCTTTGCTAGAGGAGTTCAGTGATGATTACAGGTTTGTCAATTGGTGCCTGCCAATTGTAGGATGGAGCTCGTCGGAAAAAGTTGAATCACTAATGTCGGCTCTAGGGGATTGTAGACTTCCAACGTTTCCCGACAGTATTTCGTGGCTACCCAGATGTAATGCAGGAAATGAGATTGAAAACCTGAGAGATGAACTTGAAAATGGCTTGATTGAATACCTGACGCATTCAAGTAAGATGATGGGACCTGCACTTGCTATAAAAGAGGCACATGTTATGCTACAAAGAAGCTGCCGACTTGAGCGCCATGACTCGTGCTGCTATATAGTTCCGAATTGGGTTATCATCTTCCGACGAATTTTCAACTGGCGGTTAATGGGTTTAGCCAATGGGGCATTCTCTTCGGCTTATGTCTTGGAAAGTCCTCGTCTTAACACAGTTTCTGGGAACCTGGGTAAGTTGGGGCTTGAAGATACCGGACCTTCGCCCTCTTACCTTAATCAGCCGACTCTGGATGAAGTCATCGAAGTTGGGTGCGGCCCTCCTTCATCCCATAGAGGGCGGCCCTTGCTAGAATCGGGTCTAGCTCTTCGTGAAACATCTGATGGTGAAATCCACGAGACCCTGAATGCAAATGACTGGATGGAGGATGAACGAAGTTTAGCGCACGATGGTGAAGCGGAAATAGAAAACGTATCCCACGAAAATGGGAGGTTGGAGAATGCTGGCATAGAAATGGTGGTGACTGGAGAAGCGACCAAGGGAGCTGAAAAATTAAGCATATTGCTAGAACAGTGTAACATGTTACAGAATGTGATAGACGAGAAGCTGTCCGTTTATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0010468 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0031981 GO:0034399 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044030 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051252 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0070920 GO:0080090 GO:0090065 GO:1900368

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM3AP_GANP SAC3_GANP

Protein Analysis

1606

Amino Acids

179.63

Weight (kDa)

6.07

Isoelectric Point (pI)

54.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAC3_GANP	PF03399	415 - 708	6.4e-82	SAC3/GANP family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06290 AT3G06290 AT3G06290 AT3G06290
fragaria_vesca	FvH4_4g13920 FvH4_4g13920 FvH4_4g13920 FvH4_4g13920 FvH4_4g13920
malus_domestica	MD13G1178600.v1.1 MD16G1179800.v1.1
prunus_persica	Prupe.1G147400_v2.0.a1
pyrus_communis	pycom13g15420 pycom16g15090
rosa_chinensis	RchiOBHm_Chr4g0419781
rosa_laevigata	RLG00000007798
rosa_multiflora	Rmu_sc0016868.1_g000004
rosa_roxburghii	Rroxscaffold_5G00362580
rosa_rugosa	Rorug04G0160400
rosa_samantha	Rh4AG221500 Rh4BG223500 Rh4CG234700 Rh4DG220600
rosa_wichuraiana	Rw4G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	862, 2006, 4228
AccB1I	GGYRCC	1 cut(s)	4017
AccB7I	CCANNNNNTGG	3 cut(s)	2657, 2806, 3646
AccI	GTMKAC	1 cut(s)	4087
AccII	CGCG	4 cut(s)	55, 154, 1876, 3798
AclI	AACGTT	1 cut(s)	4097
AcoI	YGGCCR	3 cut(s)	155, 185, 909
AcsI	RAATTY	8 cut(s)	661, 889, 2292, 2835, 2881, 3004, 3820, 4329
AcuI	CTGAAG	6 cut(s)	282, 381, 894, 1842, 2298, 2972
AcyI	GRCGYC	1 cut(s)	125
AfaI	GTAC	8 cut(s)	107, 817, 834, 988, 1171, 1793, 2745, 2767
AfeI	AGCGCT	1 cut(s)	1304
AflII	CTTAAG	1 cut(s)	3580
AflIII	ACRYGT	2 cut(s)	4243, 4773
AhlI	ACTAGT	1 cut(s)	575
AjuI	GAANNNNNNNTTGG	6 cut(s)	2317, 2349, 3812, 3844, 4352, 4384
AleI	CACNNNNGTG	1 cut(s)	4644
AloI	GAACNNNNNNTCC	2 cut(s)	2929, 2961
Alw21I	GWGCWC	5 cut(s)	409, 1815, 2665, 2965, 4043
Alw26I	GTCTC	8 cut(s)	730, 2024, 2042, 2589, 3265, 3361, 3641, 4586
AlwNI	CAGNNNCTG	1 cut(s)	4415
Ama87I	CYCGRG	4 cut(s)	109, 828, 941, 3965
Aor51HI	AGCGCT	1 cut(s)	1304
ApoI	RAATTY	8 cut(s)	661, 889, 2292, 2835, 2881, 3004, 3820, 4329
ArsI	GACNNNNNNTTYG	2 cut(s)	3508, 3540
Asp700I	GAANNNNTTC	1 cut(s)	3804
AspLEI	GCGC	4 cut(s)	1305, 1876, 4278, 4639
AsuC2I	CCSGG	7 cut(s)	110, 111, 147, 905, 1027, 1238, 3173
AsuHPI	GGTGA	7 cut(s)	375, 918, 2803, 3245, 4592, 4658, 4726
AsuII	TTCGAA	1 cut(s)	1507
AvaI	CYCGRG	4 cut(s)	109, 828, 941, 3965
AvaII	GGWCC	7 cut(s)	131, 140, 453, 2561, 3866, 4217, 4451
AxyI	CCTNAGG	1 cut(s)	1191
BaeGI	GKGCMC	1 cut(s)	1238
BaeI	ACNNNNGTAYC	2 cut(s)	3862, 3895
BalI	TGGCCA	1 cut(s)	911
BamHI	GGATCC	2 cut(s)	491, 1401
BanI	GGYRCC	1 cut(s)	4017
BanII	GRGCYC	3 cut(s)	409, 1815, 4043
BauI	CACGAG	3 cut(s)	2593, 4285, 4589
BbsI	GAAGAC	3 cut(s)	2265, 2832, 3518
Bbv12I	GWGCWC	5 cut(s)	409, 1815, 2665, 2965, 4043
BceAI	ACGGC	1 cut(s)	524
BcgI	CGANNNNNNTGC	4 cut(s)	3741, 3775, 4356, 4390
BciVI	GTATCC	3 cut(s)	3469, 3890, 4678
BclI	TGATCA	1 cut(s)	1705
BcnI	CCSGG	7 cut(s)	110, 111, 147, 905, 1027, 1238, 3173
BcoDI	GTCTC	8 cut(s)	730, 2024, 2042, 2589, 3265, 3361, 3641, 4586
BcuI	ACTAGT	1 cut(s)	575
BfmI	CTRYAG	4 cut(s)	339, 438, 1406, 1734
BfoI	RGCGCY	2 cut(s)	1306, 4279
BfrI	CTTAAG	1 cut(s)	3580
BfuAI	ACCTGC	3 cut(s)	862, 2006, 4228
BfuI	GTATCC	3 cut(s)	3469, 3890, 4678
BglI	GCCNNNNNGGC	1 cut(s)	4364
BglII	AGATCT	1 cut(s)	3397
BlpI	GCTNAGC	2 cut(s)	1014, 1368
BmcAI	AGTACT	1 cut(s)	817
Bme18I	GGWCC	7 cut(s)	131, 140, 453, 2561, 3866, 4217, 4451
BmeT110I	CYCGRG	4 cut(s)	109, 828, 941, 3965
BmrI	ACTGGG	1 cut(s)	3251
BmuI	ACTGGG	1 cut(s)	3251
BoxI	GACNNNNGTC	1 cut(s)	899
BpiI	GAAGAC	3 cut(s)	2265, 2832, 3518
BpmI	CTGGAG	8 cut(s)	252, 351, 1580, 1824, 2006, 2481, 2664, 4740
Bpu1102I	GCTNAGC	2 cut(s)	1014, 1368
Bpu14I	TTCGAA	1 cut(s)	1507
BpuEI	CTTGAG	7 cut(s)	654, 963, 1537, 1597, 1754, 3020, 4292
BpuMI	CCSGG	7 cut(s)	110, 111, 147, 905, 1027, 1238, 3173
BsaBI	GATNNNNATC	5 cut(s)	465, 741, 1290, 1320, 3330
BsaHI	GRCGYC	1 cut(s)	125
BsaI	GGTCTC	5 cut(s)	730, 2024, 2042, 3641, 4586
BsaWI	WCCGGW	2 cut(s)	3461, 4448
BsaXI	ACNNNNNCTCC	2 cut(s)	199, 229
Bse21I	CCTNAGG	1 cut(s)	1191
Bse3DI	GCAATG	3 cut(s)	1186, 2076, 2717
Bse8I	GATNNNNATC	5 cut(s)	465, 741, 1290, 1320, 3330
BseJI	GATNNNNATC	5 cut(s)	465, 741, 1290, 1320, 3330
BseMI	GCAATG	3 cut(s)	1186, 2076, 2717
BseMII	CTCAG	7 cut(s)	1182, 1242, 1359, 1623, 3227, 3276, 4148
BseRI	GAGGAG	5 cut(s)	276, 1632, 2918, 3265, 3998
BseSI	GKGCMC	1 cut(s)	1238
BseX3I	CGGCCG	1 cut(s)	185
BseYI	CCCAGC	2 cut(s)	2371, 2619
BsgI	GTGCAG	1 cut(s)	4206
Bsh1236I	CGCG	4 cut(s)	55, 154, 1876, 3798
Bsh1285I	CGRYCG	3 cut(s)	184, 188, 713
BshNI	GGYRCC	1 cut(s)	4017
BsiEI	CGRYCG	3 cut(s)	184, 188, 713
BsiHKAI	GWGCWC	5 cut(s)	409, 1815, 2665, 2965, 4043
BsiHKCI	CYCGRG	4 cut(s)	109, 828, 941, 3965
BsiSI	CCGG	8 cut(s)	110, 146, 905, 1027, 1238, 3173, 3462, 4449
BslFI	GGGAC	8 cut(s)	662, 887, 1321, 2354, 2547, 2700, 3665, 4230
BsmAI	GTCTC	8 cut(s)	730, 2024, 2042, 2589, 3265, 3361, 3641, 4586
BsmFI	GGGAC	8 cut(s)	662, 887, 1321, 2354, 2547, 2700, 3665, 4230
BsmI	GAATGC	8 cut(s)	379, 1500, 1527, 2695, 4198, 4367, 4606, 4699
Bso31I	GGTCTC	5 cut(s)	730, 2024, 2042, 3641, 4586
BsoBI	CYCGRG	4 cut(s)	109, 828, 941, 3965
Bsp119I	TTCGAA	1 cut(s)	1507
Bsp1286I	GDGCHC	6 cut(s)	409, 1238, 1815, 2665, 2965, 4043
Bsp1407I	TGTACA	1 cut(s)	2743
Bsp1720I	GCTNAGC	2 cut(s)	1014, 1368
Bsp19I	CCATGG	2 cut(s)	349, 2640
BspCNI	CTCAG	7 cut(s)	1183, 1243, 1360, 1624, 3226, 3275, 4149
BspFNI	CGCG	4 cut(s)	55, 154, 1876, 3798
BspMAI	CTGCAG	3 cut(s)	343, 442, 1410
BspMI	ACCTGC	3 cut(s)	862, 2006, 4228
BspQI	GCTCTTC	2 cut(s)	756, 4566
BspT104I	TTCGAA	1 cut(s)	1507
BspT107I	GGYRCC	1 cut(s)	4017
BspTI	CTTAAG	1 cut(s)	3580
BspTNI	GGTCTC	5 cut(s)	730, 2024, 2042, 3641, 4586
BsrDI	GCAATG	3 cut(s)	1186, 2076, 2717
BsrGI	TGTACA	1 cut(s)	2743
BssNI	GRCGYC	1 cut(s)	125
BssSI	CACGAG	3 cut(s)	2593, 4285, 4589
BssT1I	CCWWGG	8 cut(s)	349, 588, 720, 2032, 2640, 3503, 3900, 4731
Bst2BI	CACGAG	3 cut(s)	2593, 4285, 4589
Bst4CI	ACNGT	8 cut(s)	2555, 3202, 3524, 3557, 3878, 4109, 4411, 4767
Bst6I	CTCTTC	4 cut(s)	298, 756, 4378, 4566
BstACI	GRCGYC	1 cut(s)	125
BstAFI	CTTAAG	1 cut(s)	3580
BstAPI	GCANNNNNTGC	2 cut(s)	2993, 2996
BstAUI	TGTACA	1 cut(s)	2743
BstBI	TTCGAA	1 cut(s)	1507
BstDSI	CCRYGG	2 cut(s)	349, 2640
BstEII	GGTNACC	2 cut(s)	924, 2809
BstENI	CCTNNNNNAGG	3 cut(s)	291, 339, 2849
BstFNI	CGCG	4 cut(s)	55, 154, 1876, 3798
BstH2I	RGCGCY	2 cut(s)	1306, 4279
BstHHI	GCGC	4 cut(s)	1305, 1876, 4278, 4639
BstMAI	GTCTC	8 cut(s)	730, 2024, 2042, 2589, 3265, 3361, 3641, 4586
BstMCI	CGRYCG	3 cut(s)	184, 188, 713
BstNSI	RCATGY	6 cut(s)	1336, 1970, 2015, 2695, 4247, 4777
BstPAI	GACNNNNGTC	1 cut(s)	899
BstPI	GGTNACC	2 cut(s)	924, 2809
BstSFI	CTRYAG	4 cut(s)	339, 438, 1406, 1734
BstSLI	GKGCMC	1 cut(s)	1238
BstUI	CGCG	4 cut(s)	55, 154, 1876, 3798
BstV2I	GAAGAC	3 cut(s)	2265, 2832, 3518
BstX2I	RGATCY	6 cut(s)	21, 491, 1285, 1401, 3331, 3397
BstXI	CCANNNNNNTGG	4 cut(s)	2065, 3704, 3954, 4679
BstYI	RGATCY	6 cut(s)	21, 491, 1285, 1401, 3331, 3397
BstZI	CGGCCG	1 cut(s)	185
Bsu36I	CCTNAGG	1 cut(s)	1191
BsuI	GTATCC	3 cut(s)	3469, 3890, 4678
BtgI	CCRYGG	2 cut(s)	349, 2640
BtsI	GCAGTG	1 cut(s)	2963
BtsIMutI	CAGTG	5 cut(s)	2560, 2963, 3721, 3997, 4772
BveI	ACCTGC	3 cut(s)	862, 2006, 4228
CaiI	CAGNNNCTG	1 cut(s)	4415
CfoI	GCGC	4 cut(s)	1305, 1876, 4278, 4639
Cfr9I	CCCGGG	1 cut(s)	109
CseI	GACGC	5 cut(s)	114, 236, 889, 2697, 4204
Csp6I	GTAC	8 cut(s)	106, 816, 833, 987, 1170, 1792, 2744, 2766
CspCI	CAANNNNNGTGG	4 cut(s)	655, 690, 3294, 3329
CviQI	GTAC	8 cut(s)	106, 816, 833, 987, 1170, 1792, 2744, 2766
EaeI	YGGCCR	3 cut(s)	155, 185, 909
EagI	CGGCCG	1 cut(s)	185
Eam1104I	CTCTTC	4 cut(s)	298, 756, 4378, 4566
EarI	CTCTTC	4 cut(s)	298, 756, 4378, 4566
EciI	GGCGGA	1 cut(s)	192
Ecl136II	GAGCTC	3 cut(s)	407, 1813, 4041
EclXI	CGGCCG	1 cut(s)	185
Eco130I	CCWWGG	8 cut(s)	349, 588, 720, 2032, 2640, 3503, 3900, 4731
Eco147I	AGGCCT	1 cut(s)	2419
Eco24I	GRGCYC	3 cut(s)	409, 1815, 4043
Eco31I	GGTCTC	5 cut(s)	730, 2024, 2042, 3641, 4586
Eco32I	GATATC	1 cut(s)	2452
Eco47I	GGWCC	7 cut(s)	131, 140, 453, 2561, 3866, 4217, 4451
Eco47III	AGCGCT	1 cut(s)	1304
Eco52I	CGGCCG	1 cut(s)	185
Eco53kI	GAGCTC	3 cut(s)	407, 1813, 4041
Eco57I	CTGAAG	6 cut(s)	282, 381, 894, 1842, 2298, 2972
Eco81I	CCTNAGG	1 cut(s)	1191
Eco88I	CYCGRG	4 cut(s)	109, 828, 941, 3965
Eco91I	GGTNACC	2 cut(s)	924, 2809
EcoICRI	GAGCTC	3 cut(s)	407, 1813, 4041
EcoNI	CCTNNNNNAGG	3 cut(s)	291, 339, 2849
EcoO109I	RGGNCCY	4 cut(s)	257, 356, 2561, 4217
EcoO65I	GGTNACC	2 cut(s)	924, 2809
EcoRI	GAATTC	3 cut(s)	2881, 3004, 3820
EcoRV	GATATC	1 cut(s)	2452
EcoT14I	CCWWGG	8 cut(s)	349, 588, 720, 2032, 2640, 3503, 3900, 4731
EcoT22I	ATGCAT	3 cut(s)	1596, 1968, 2697
EcoT38I	GRGCYC	3 cut(s)	409, 1815, 4043
ErhI	CCWWGG	8 cut(s)	349, 588, 720, 2032, 2640, 3503, 3900, 4731
FalI	AAGNNNNNCTT	8 cut(s)	412, 444, 1840, 1872, 3487, 3519, 3510, 3542
FaqI	GGGAC	8 cut(s)	662, 887, 1321, 2354, 2547, 2700, 3665, 4230
FauI	CCCGC	2 cut(s)	1813, 3690
FauNDI	CATATG	1 cut(s)	2338
FbaI	TGATCA	1 cut(s)	1705
FblI	GTMKAC	1 cut(s)	4087
FriOI	GRGCYC	3 cut(s)	409, 1815, 4043
GlaI	GCGC	4 cut(s)	1304, 1875, 4277, 4638
GsaI	CCCAGC	2 cut(s)	2375, 2623
GsuI	CTGGAG	8 cut(s)	252, 351, 1580, 1824, 2006, 2481, 2664, 4740
HaeII	RGCGCY	2 cut(s)	1306, 4279
HapII	CCGG	8 cut(s)	110, 146, 905, 1027, 1238, 3173, 3462, 4449
HgaI	GACGC	5 cut(s)	114, 236, 889, 2697, 4204
HhaI	GCGC	4 cut(s)	1305, 1876, 4278, 4639
Hin1I	GRCGYC	1 cut(s)	125
Hin6I	GCGC	4 cut(s)	1303, 1874, 4276, 4637
HinP1I	GCGC	4 cut(s)	1303, 1874, 4276, 4637
HincII	GTYRAC	1 cut(s)	326
HindII	GTYRAC	1 cut(s)	326
HindIII	AAGCTT	1 cut(s)	1953
HpaII	CCGG	8 cut(s)	110, 146, 905, 1027, 1238, 3173, 3462, 4449
HphI	GGTGA	7 cut(s)	375, 918, 2803, 3245, 4592, 4658, 4726
Hpy166II	GTNNAC	5 cut(s)	326, 456, 835, 3316, 4088
Hpy8I	GTNNAC	5 cut(s)	326, 456, 835, 3316, 4088
Hpy99I	CGWCG	4 cut(s)	230, 2946, 4048, 4329
HpyCH4III	ACNGT	8 cut(s)	2555, 3202, 3524, 3557, 3878, 4109, 4411, 4767
HpyCH4IV	ACGT	3 cut(s)	2944, 4097, 4665
HpySE526I	ACGT	3 cut(s)	2944, 4097, 4665
Hsp92I	GRCGYC	1 cut(s)	125
HspAI	GCGC	4 cut(s)	1303, 1874, 4276, 4637
Ksp22I	TGATCA	1 cut(s)	1705
LguI	GCTCTTC	2 cut(s)	756, 4566
LmnI	GCTCC	9 cut(s)	238, 271, 370, 1561, 3252, 3266, 3832, 4038, 4736
MaeII	ACGT	3 cut(s)	2944, 4097, 4665
MfeI	CAATTG	4 cut(s)	1416, 1694, 4012, 4026
MflI	RGATCY	6 cut(s)	21, 491, 1285, 1401, 3331, 3397
MhlI	GDGCHC	6 cut(s)	409, 1238, 1815, 2665, 2965, 4043
MlsI	TGGCCA	1 cut(s)	911
MluNI	TGGCCA	1 cut(s)	911
MmeI	TCCRAC	7 cut(s)	249, 733, 2802, 4026, 4118, 4348, 4668
Mox20I	TGGCCA	1 cut(s)	911
Mph1103I	ATGCAT	3 cut(s)	1596, 1968, 2697
MroXI	GAANNNNTTC	1 cut(s)	3804
MscI	TGGCCA	1 cut(s)	911
MslI	CAYNNNNRTG	3 cut(s)	4644, 4677, 4706
Msp20I	TGGCCA	1 cut(s)	911
MspA1I	CMGCKG	5 cut(s)	180, 238, 277, 376, 1367
MspCI	CTTAAG	1 cut(s)	3580
MspI	CCGG	8 cut(s)	110, 146, 905, 1027, 1238, 3173, 3462, 4449
MunI	CAATTG	4 cut(s)	1416, 1694, 4012, 4026
Mva1269I	GAATGC	8 cut(s)	379, 1500, 1527, 2695, 4198, 4367, 4606, 4699
MvnI	CGCG	4 cut(s)	55, 154, 1876, 3798
NciI	CCSGG	7 cut(s)	110, 111, 147, 905, 1027, 1238, 3173
NcoI	CCATGG	2 cut(s)	349, 2640
NdeI	CATATG	1 cut(s)	2338
NmuCI	GTSAC	9 cut(s)	541, 686, 924, 2809, 3380, 3654, 3716, 3909, 4714
NsiI	ATGCAT	3 cut(s)	1596, 1968, 2697
NspI	RCATGY	6 cut(s)	1336, 1970, 2015, 2695, 4247, 4777
NspV	TTCGAA	1 cut(s)	1507
OliI	CACNNNNGTG	1 cut(s)	4644
PaeI	GCATGC	2 cut(s)	1970, 2695
PceI	AGGCCT	1 cut(s)	2419
PciI	ACATGT	2 cut(s)	4243, 4773
PciSI	GCTCTTC	2 cut(s)	756, 4566
PcsI	WCGNNNNNNNCGW	1 cut(s)	4671
PctI	GAATGC	8 cut(s)	379, 1500, 1527, 2695, 4198, 4367, 4606, 4699
PdmI	GAANNNNTTC	1 cut(s)	3804
PfeI	GAWTC	9 cut(s)	461, 600, 824, 2473, 2527, 3758, 3938, 4058, 4547
PflMI	CCANNNNNTGG	3 cut(s)	2657, 2806, 3646
Ple19I	CGATCG	1 cut(s)	713
PpuMI	RGGWCCY	2 cut(s)	2561, 4217
PscI	ACATGT	2 cut(s)	4243, 4773
PshAI	GACNNNNGTC	1 cut(s)	899
Psp124BI	GAGCTC	3 cut(s)	409, 1815, 4043
Psp1406I	AACGTT	1 cut(s)	4097
Psp5II	RGGWCCY	2 cut(s)	2561, 4217
PspEI	GGTNACC	2 cut(s)	924, 2809
PspFI	CCCAGC	2 cut(s)	2371, 2619
PspPPI	RGGWCCY	2 cut(s)	2561, 4217
PsrI	GAACNNNNNNTAC	4 cut(s)	565, 597, 2758, 2790
PstI	CTGCAG	3 cut(s)	343, 442, 1410
PstNI	CAGNNNCTG	1 cut(s)	4415
PsuI	RGATCY	6 cut(s)	21, 491, 1285, 1401, 3331, 3397
PvuI	CGATCG	1 cut(s)	713
PvuII	CAGCTG	3 cut(s)	277, 376, 1367
RsaI	GTAC	8 cut(s)	107, 817, 834, 988, 1171, 1793, 2745, 2767
RsaNI	GTAC	8 cut(s)	106, 816, 833, 987, 1170, 1792, 2744, 2766
RseI	CAYNNNNRTG	3 cut(s)	4644, 4677, 4706
SacI	GAGCTC	3 cut(s)	409, 1815, 4043
SapI	GCTCTTC	2 cut(s)	756, 4566
ScaI	AGTACT	1 cut(s)	817
SduI	GDGCHC	6 cut(s)	409, 1238, 1815, 2665, 2965, 4043
SfcI	CTRYAG	4 cut(s)	339, 438, 1406, 1734
SfuI	TTCGAA	1 cut(s)	1507
SinI	GGWCC	7 cut(s)	131, 140, 453, 2561, 3866, 4217, 4451
SmaI	CCCGGG	1 cut(s)	111
SmiMI	CAYNNNNRTG	3 cut(s)	4644, 4677, 4706
SmlI	CTYRAG	8 cut(s)	669, 978, 1516, 1612, 1769, 3035, 3580, 4271
SmoI	CTYRAG	8 cut(s)	669, 978, 1516, 1612, 1769, 3035, 3580, 4271
SpeI	ACTAGT	1 cut(s)	575
SphI	GCATGC	2 cut(s)	1970, 2695
SseBI	AGGCCT	1 cut(s)	2419
SspI	AATATT	1 cut(s)	2332
SstI	GAGCTC	3 cut(s)	409, 1815, 4043
StuI	AGGCCT	1 cut(s)	2419
StyI	CCWWGG	8 cut(s)	349, 588, 720, 2032, 2640, 3503, 3900, 4731
TaaI	ACNGT	8 cut(s)	2555, 3202, 3524, 3557, 3878, 4109, 4411, 4767
TaiI	ACGT	3 cut(s)	2947, 4100, 4668
TaqI	TCGA	9 cut(s)	1290, 1492, 1507, 1659, 1750, 1924, 3545, 3624, 4497
TatI	WGTACW	2 cut(s)	815, 2743
TauI	GCSGC	4 cut(s)	157, 190, 4512, 4537
TfiI	GAWTC	9 cut(s)	461, 600, 824, 2473, 2527, 3758, 3938, 4058, 4547
TscAI	CASTG	5 cut(s)	2560, 2970, 3721, 3997, 4772
TseFI	GTSAC	9 cut(s)	541, 686, 924, 2809, 3380, 3654, 3716, 3909, 4714
Tsp45I	GTSAC	9 cut(s)	541, 686, 924, 2809, 3380, 3654, 3716, 3909, 4714
TspGWI	ACGGA	3 cut(s)	237, 975, 4795
TspMI	CCCGGG	1 cut(s)	109
TspRI	CASTG	5 cut(s)	2560, 2970, 3721, 3997, 4772
Van91I	CCANNNNNTGG	3 cut(s)	2657, 2806, 3646
Vha464I	CTTAAG	1 cut(s)	3580
VpaK11BI	GGWCC	7 cut(s)	131, 140, 453, 2561, 3866, 4217, 4451
XagI	CCTNNNNNAGG	3 cut(s)	291, 339, 2849
XapI	RAATTY	8 cut(s)	661, 889, 2292, 2835, 2881, 3004, 3820, 4329
XbaI	TCTAGA	1 cut(s)	3226
XceI	RCATGY	6 cut(s)	1336, 1970, 2015, 2695, 4247, 4777
XcmI	CCANNNNNNNNNTGG	2 cut(s)	904, 4032
XmaI	CCCGGG	1 cut(s)	109
XmiI	GTMKAC	1 cut(s)	4087
XmnI	GAANNNNTTC	1 cut(s)	3804
ZrmI	AGTACT	1 cut(s)	817
Zsp2I	ATGCAT	3 cut(s)	1596, 1968, 2697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.