Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008349

Physical Location & Seq

Genomic Coordinates Reverse (-)

18889915 .. 18894748

Gene Structure 4834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGCGTGGTTCTGGAAAGAAATCAAACCTCAAAGAGTCCGGGAAATCTGGTTATTCCAGTTCCGTGGCGAAGCTGATTTCATCACCAAGTTTTAAAAAAGGCGGAAAAGTTCCCCGTGTTAAGAAACTAAAACCAAAGTCGTCCAAGACTATTATCGCGTCAGCCTTGTCAAAGAAGAGAGGTGCCGACTCTTCAAGCAAAGCATCAACGTCAAGGAATAATGATACTAACAAAAAATTGATGAGTAGAAAAGAATTTCATAAAGTGCATGATACAGATTCTTCCAAAAAGCCGTCTTCAGTGAAACTTCAGGACCACAAGTTATCAGACAATGGCTCTGATGAGAAGGGGGAGAAAAGGAGGAGAAAGAAGAAACCGAAAAAGGATAAGGTGGAGTTGGATGAAACTTCTCGCCTGCAGAGGAGGACAAGGTACCTGTTGATTAAAATAAAGCTGGAGCAGAACCTTATTGATGCTTATGCCGGTGAAGGTTGGAAGGGTCAGAGTCGAGAAAAGATTAGGCCAGAATTGGAACTGCAGAGAGCCAATAAGCAGATTTTAAATTGCAAGCTTGGAATCCGCGATGCCATTCAACAACTGGATTCTCTGAGCTCAGTAGGAAGCATCGCAGATTCTTTTATTGCTCCAGATGGATCTGTTTCTCATGAACATATATTCTGTGCGAAGTGCAAGTTGAACGAAGCTTTCCCTGATAATGATATTATACTGTGTGATGGGACATGCAATTGTGCATTCCACCAAAAATGTCTTATCGATCCTCCCTTGGATACTGAAAATAGTAAGTTTCTCACCTCTTTGGAATTTTCTTTGGACCCTTTGGATGTCTTCAAGGAAGAAGCCACTTTCCCCGTTGGTGAGAATTCCTTATTAAATCCAGATGAAGAATGGCCTTCGGATGATTCTGAAGATGATGATTATAAACCAGAGAGGAATGTGAACAGCTGCAGCATCAGCAGGGGAGGCAGCGATGACAATGTATCAGAAGAGGAATTGTCAACTGATGTCAGTGTAGGTTCTGATGAATCTACTGATGGGGAAATTGTTTCTGGCCGCAGACAGAGAAGAAGTGTTGATTATAAGAAGTTATATGATGAAATGTTTGGAAAAGATGGTCCTTTGCTCGAACAAATCAGTGATGATGAAGACTGGGGTCCTGTTAAACGAAAGCGAAGAGAAAAAGAATCTGATGCGGCCAGCACCCTTATGACTCTCTATGAAAGCGAAAGAAATCCAGATATTGACCATACAGAAGTGAAAAATATACGTTCTTCTGATACGCAAGTTAGAAGATCCTGCTTCCGAATTCCTCGAAAGGCAGTAGAGAAGCTCCGCCAAGTGTTTTCTGAGAATGAACTTCCTTCTAGAGCTGTCAAGGACAATCTTTCAAAAGAGTTGGGCCTTAATCCCGAGAAGGTTAGTAAATGGTTCAAGAACGCACGTTACTTAGCTCTGAAAACCAGAAAGGAAGTGAGTGGTAAAGACCATCAGACTTTTACTCCTGGAATCTCCAAGGAACCAGGATATGAAAATGTGACTGGAAAAGCTGCGGATCTCATGGCTTCAGATTCAGATGACGATACCTTAGCTGAAACTGTGGTCCATTCCCCAAAGAATGTTAATGCAGCTTTCCGGAGAAAGCATCCAAAATCACTAAGTAGCCCTTTGAGGAAAAGTCAACAGAAAGCCCCTTCGTGTGGGTCACCTTCAAAGAGCAACAAGGATGGAAAAGAGTCGAGTGATGATGTGAGCTTGAAGAAGCTTATGAACACAAGAACAAAGGAGAAGCGGGCGAACCTTATCGCTGGAGGCGGTGGAGATGGATGTCGAGCTGCAGAGCTGGAAATGGAGAGACTATGCAAAGCCAAAGGTAGGCTAGAACATATGAGACAGAAATTACTGAAATTGCAAAATGTGAAAGCAAAGCAGAAATCGAATAAATCTCTCTTGCATGAACACACTGTGATTTATGTTCCAGTAGCACAACTGCAGGAAAAGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox PHD

Protein Analysis

674

Amino Acids

75.31

Weight (kDa)

9.25

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	444 - 488	3e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29940 AT4G29940
fragaria_vesca	FvH4_4g07290 FvH4_4g07290
malus_domestica	MD13G1241800.v1.1 MD16G1248700.v1.1
prunus_persica	Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1
pyrus_communis	pycom13g21370 pycom16g20840
rosa_chinensis	RchiOBHm_Chr4g0399601
rosa_laevigata	RLG00000009259
rosa_multiflora	Rmu_sc0002285.1_g000037
rosa_roxburghii	Rroxscaffold_5G00344520
rosa_rugosa	Rorug04G0017600
rosa_samantha	Rh4AG095500 Rh4BG093000 Rh4CG104000 Rh4DG087900
rosa_wichuraiana	Rw4G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	939, 1098
Acc65I	GGTACC	1 cut(s)	432
AccB1I	GGYRCC	2 cut(s)	182, 432
AccII	CGCG	2 cut(s)	158, 582
AccIII	TCCGGA	1 cut(s)	1650
AciI	CCGC	8 cut(s)	102, 580, 1072, 1211, 1351, 1568, 1807, 1830
AclWI	GGATC	4 cut(s)	661, 770, 1305, 1578
AcoI	YGGCCR	2 cut(s)	1069, 1212
AcsI	RAATTY	4 cut(s)	254, 821, 880, 1323
AcuI	CTGAAG	4 cut(s)	282, 293, 945, 1566
AdeI	CACNNNGTG	1 cut(s)	1981
AfaI	GTAC	1 cut(s)	434
AfiI	CCNNNNNNNGG	2 cut(s)	1715, 1890
AgsI	TTSAA	8 cut(s)	195, 593, 697, 850, 1407, 1450, 1728, 1774
AjnI	CCWGG	2 cut(s)	1519, 1537
Alw21I	GWGCWC	1 cut(s)	614
Alw26I	GTCTC	2 cut(s)	1864, 1900
AlwI	GGATC	4 cut(s)	661, 770, 1305, 1578
Ama87I	CYCGRG	1 cut(s)	1427
Aor13HI	TCCGGA	1 cut(s)	1650
AoxI	GGCC	5 cut(s)	521, 908, 1069, 1212, 1417
ApeKI	GCWGC	6 cut(s)	963, 966, 984, 1565, 1643, 1850
ApoI	RAATTY	4 cut(s)	254, 821, 880, 1323
Asp718I	GGTACC	1 cut(s)	432
AspS9I	GGNCC	6 cut(s)	313, 832, 1133, 1172, 1417, 1618
AsuC2I	CCSGG	1 cut(s)	40
AsuHPI	GGTGA	5 cut(s)	75, 497, 802, 887, 1713
AvaI	CYCGRG	1 cut(s)	1427
AvaII	GGWCC	5 cut(s)	313, 832, 1133, 1172, 1618
BaeI	ACNNNNGTAYC	2 cut(s)	1287, 1320
BanI	GGYRCC	2 cut(s)	182, 432
BanII	GRGCYC	1 cut(s)	614
BbsI	GAAGAC	3 cut(s)	288, 838, 1170
Bbv12I	GWGCWC	1 cut(s)	614
BbvI	GCAGC	6 cut(s)	950, 978, 996, 1552, 1655, 1837
BccI	CCATC	7 cut(s)	644, 728, 1046, 1124, 1512, 1736, 1832
BceAI	ACGGC	1 cut(s)	277
BciT130I	CCWGG	2 cut(s)	1521, 1539
BciVI	GTATCC	1 cut(s)	781
BcnI	CCSGG	1 cut(s)	40
BcoDI	GTCTC	2 cut(s)	1864, 1900
BfaI	CTAG	2 cut(s)	1383, 1895
BfmI	CTRYAG	5 cut(s)	416, 536, 964, 1851, 2006
BfuI	GTATCC	1 cut(s)	781
BisI	GCNGC	8 cut(s)	964, 967, 985, 1072, 1212, 1566, 1644, 1851
BlsI	GCNGC	8 cut(s)	965, 968, 986, 1073, 1213, 1567, 1645, 1852
Bme1390I	CCNGG	3 cut(s)	40, 1521, 1539
Bme18I	GGWCC	5 cut(s)	313, 832, 1133, 1172, 1618
BmeT110I	CYCGRG	1 cut(s)	1427
BmgT120I	GGNCC	6 cut(s)	313, 832, 1133, 1172, 1417, 1618
BmiI	GGNNCC	5 cut(s)	184, 434, 834, 1173, 1536
BmrFI	CCNGG	3 cut(s)	40, 1521, 1539
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	7 cut(s)	212, 463, 574, 633, 978, 1198, 1669
BmuI	ACTGGG	1 cut(s)	1177
BoxI	GACNNNNGTC	1 cut(s)	1170
BpiI	GAAGAC	3 cut(s)	288, 838, 1170
BpmI	CTGGAG	3 cut(s)	476, 630, 1845
Bpu10I	CCTNAGC	1 cut(s)	1603
BpuMI	CCSGG	1 cut(s)	40
Bsa29I	ATCGAT	1 cut(s)	774
BsaJI	CCNNGG	3 cut(s)	63, 783, 1530
BsaWI	WCCGGW	1 cut(s)	1650
BsaXI	ACNNNNNCTCC	2 cut(s)	1501, 1531
Bsc4I	CCNNNNNNNGG	2 cut(s)	1715, 1890
Bse118I	RCCGGY	1 cut(s)	482
Bse1I	ACTGG	5 cut(s)	57, 603, 1172, 1561, 1994
BseAI	TCCGGA	1 cut(s)	1650
BseBI	CCWGG	2 cut(s)	1521, 1539
BseCI	ATCGAT	1 cut(s)	774
BseDI	CCNNGG	3 cut(s)	63, 783, 1530
BseGI	GGATG	6 cut(s)	406, 847, 922, 1660, 1747, 1847
BseLI	CCNNNNNNNGG	2 cut(s)	1715, 1890
BseMII	CTCAG	3 cut(s)	599, 627, 1356
BseNI	ACTGG	5 cut(s)	57, 603, 1172, 1561, 1994
BseRI	GAGGAG	2 cut(s)	376, 436
BseXI	GCAGC	6 cut(s)	950, 978, 996, 1552, 1655, 1837
Bsh1236I	CGCG	2 cut(s)	158, 582
BshFI	GGCC	5 cut(s)	523, 910, 1071, 1214, 1419
BshNI	GGYRCC	2 cut(s)	182, 432
BshVI	ATCGAT	1 cut(s)	774
BsiHKAI	GWGCWC	1 cut(s)	614
BsiHKCI	CYCGRG	1 cut(s)	1427
BsiSI	CCGG	3 cut(s)	39, 483, 1651
BslFI	GGGAC	1 cut(s)	751
BslI	CCNNNNNNNGG	2 cut(s)	1715, 1890
BsmAI	GTCTC	2 cut(s)	1864, 1900
BsmFI	GGGAC	1 cut(s)	751
BsmI	GAATGC	1 cut(s)	752
BsnI	GGCC	5 cut(s)	523, 910, 1071, 1214, 1419
BsoBI	CYCGRG	1 cut(s)	1427
Bsp1286I	GDGCHC	1 cut(s)	614
Bsp13I	TCCGGA	1 cut(s)	1650
Bsp143I	GATC	4 cut(s)	653, 775, 1310, 1570
BspACI	CCGC	8 cut(s)	102, 580, 1072, 1211, 1351, 1568, 1807, 1830
BspANI	GGCC	5 cut(s)	523, 910, 1071, 1214, 1419
BspCNI	CTCAG	3 cut(s)	600, 626, 1357
BspDI	ATCGAT	1 cut(s)	774
BspEI	TCCGGA	1 cut(s)	1650
BspFNI	CGCG	2 cut(s)	158, 582
BspHI	TCATGA	1 cut(s)	664
BspLI	GGNNCC	5 cut(s)	184, 434, 834, 1173, 1536
BspMAI	CTGCAG	5 cut(s)	420, 540, 968, 1855, 2010
BspPI	GGATC	4 cut(s)	661, 770, 1305, 1578
BspT107I	GGYRCC	2 cut(s)	182, 432
BsrFI	RCCGGY	1 cut(s)	482
BsrI	ACTGG	5 cut(s)	57, 603, 1172, 1561, 1994
BssAI	RCCGGY	1 cut(s)	482
BssECI	CCNNGG	3 cut(s)	63, 783, 1530
BssMI	GATC	4 cut(s)	653, 775, 1310, 1570
BssT1I	CCWWGG	2 cut(s)	783, 1530
Bst2UI	CCWGG	2 cut(s)	1521, 1539
Bst4CI	ACNGT	3 cut(s)	729, 1615, 1981
Bst6I	CTCTTC	4 cut(s)	170, 196, 999, 1186
BstC8I	GCNNGC	4 cut(s)	416, 569, 1216, 1809
BstDEI	CTNAG	6 cut(s)	608, 613, 1365, 1465, 1603, 1673
BstDSI	CCRYGG	1 cut(s)	63
BstEII	GGTNACC	1 cut(s)	1719
BstF5I	GGATG	6 cut(s)	406, 847, 922, 1660, 1747, 1847
BstFNI	CGCG	2 cut(s)	158, 582
BstKTI	GATC	4 cut(s)	656, 778, 1313, 1573
BstMAI	GTCTC	2 cut(s)	1864, 1900
BstMBI	GATC	4 cut(s)	653, 775, 1310, 1570
BstMWI	GCNNNNNNNGC	2 cut(s)	972, 981
BstNI	CCWGG	2 cut(s)	1521, 1539
BstNSI	RCATGY	1 cut(s)	744
BstPAI	GACNNNNGTC	1 cut(s)	1170
BstPI	GGTNACC	1 cut(s)	1719
BstSCI	CCNGG	3 cut(s)	38, 1519, 1537
BstSFI	CTRYAG	5 cut(s)	416, 536, 964, 1851, 2006
BstUI	CGCG	2 cut(s)	158, 582
BstV1I	GCAGC	6 cut(s)	950, 978, 996, 1552, 1655, 1837
BstV2I	GAAGAC	3 cut(s)	288, 838, 1170
BstX2I	RGATCY	3 cut(s)	653, 1310, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	64
BstYI	RGATCY	3 cut(s)	653, 1310, 1570
Bsu15I	ATCGAT	1 cut(s)	774
BsuI	GTATCC	1 cut(s)	781
BsuRI	GGCC	5 cut(s)	523, 910, 1071, 1214, 1419
BsuTUI	ATCGAT	1 cut(s)	774
BtgI	CCRYGG	1 cut(s)	63
BtgZI	GCGATG	3 cut(s)	597, 610, 1002
BtsCI	GGATG	6 cut(s)	406, 847, 922, 1660, 1747, 1847
BtsIMutI	CAGTG	4 cut(s)	306, 1033, 1159, 1977
Cac8I	GCNNGC	4 cut(s)	416, 569, 1216, 1809
CciI	TCATGA	1 cut(s)	664
Cfr10I	RCCGGY	1 cut(s)	482
Cfr13I	GGNCC	6 cut(s)	313, 832, 1133, 1172, 1417, 1618
ClaI	ATCGAT	1 cut(s)	774
CseI	GACGC	1 cut(s)	147
Csp6I	GTAC	1 cut(s)	433
CviAII	CATG	5 cut(s)	269, 665, 741, 1576, 1970
CviQI	GTAC	1 cut(s)	433
DdeI	CTNAG	6 cut(s)	608, 613, 1365, 1465, 1603, 1673
DpnI	GATC	4 cut(s)	655, 777, 1312, 1572
DpnII	GATC	4 cut(s)	653, 775, 1310, 1570
DraI	TTTAAA	2 cut(s)	94, 561
DraIII	CACNNNGTG	1 cut(s)	1981
EaeI	YGGCCR	2 cut(s)	1069, 1212
Eam1104I	CTCTTC	4 cut(s)	170, 196, 999, 1186
EarI	CTCTTC	4 cut(s)	170, 196, 999, 1186
EciI	GGCGGA	2 cut(s)	117, 1340
Ecl136II	GAGCTC	1 cut(s)	612
Eco130I	CCWWGG	2 cut(s)	783, 1530
Eco24I	GRGCYC	1 cut(s)	614
Eco47I	GGWCC	5 cut(s)	313, 832, 1133, 1172, 1618
Eco53kI	GAGCTC	1 cut(s)	612
Eco57I	CTGAAG	4 cut(s)	282, 293, 945, 1566
Eco88I	CYCGRG	1 cut(s)	1427
Eco91I	GGTNACC	1 cut(s)	1719
EcoICRI	GAGCTC	1 cut(s)	612
EcoO109I	RGGNCCY	1 cut(s)	1172
EcoO65I	GGTNACC	1 cut(s)	1719
EcoRI	GAATTC	2 cut(s)	880, 1323
EcoRII	CCWGG	2 cut(s)	1519, 1537
EcoT14I	CCWWGG	2 cut(s)	783, 1530
EcoT38I	GRGCYC	1 cut(s)	614
ErhI	CCWWGG	2 cut(s)	783, 1530
FaeI	CATG	5 cut(s)	272, 668, 744, 1579, 1973
FalI	AAGNNNNNCTT	2 cut(s)	1666, 1698
FaqI	GGGAC	1 cut(s)	751
FatI	CATG	5 cut(s)	268, 664, 740, 1575, 1969
FauI	CCCGC	1 cut(s)	1800
FauNDI	CATATG	1 cut(s)	1902
Fnu4HI	GCNGC	8 cut(s)	964, 967, 985, 1072, 1212, 1566, 1644, 1851
FokI	GGATG	6 cut(s)	413, 854, 929, 1647, 1754, 1854
FriOI	GRGCYC	1 cut(s)	614
Fsp4HI	GCNGC	8 cut(s)	964, 967, 985, 1072, 1212, 1566, 1644, 1851
FspBI	CTAG	2 cut(s)	1383, 1895
GluI	GCNGC	8 cut(s)	964, 967, 985, 1072, 1212, 1566, 1644, 1851
GsuI	CTGGAG	3 cut(s)	476, 630, 1845
HaeIII	GGCC	5 cut(s)	523, 910, 1071, 1214, 1419
HapII	CCGG	3 cut(s)	39, 483, 1651
HgaI	GACGC	1 cut(s)	147
Hin1II	CATG	5 cut(s)	272, 668, 744, 1579, 1973
HincII	GTYRAC	2 cut(s)	1017, 1697
HindII	GTYRAC	2 cut(s)	1017, 1697
HindIII	AAGCTT	3 cut(s)	569, 702, 1778
HpaII	CCGG	3 cut(s)	39, 483, 1651
HphI	GGTGA	5 cut(s)	75, 497, 802, 887, 1713
Hpy166II	GTNNAC	3 cut(s)	958, 1017, 1697
Hpy8I	GTNNAC	3 cut(s)	958, 1017, 1697
HpyAV	CCTTC	8 cut(s)	340, 482, 490, 921, 1389, 1426, 1719, 1734
HpyCH4III	ACNGT	3 cut(s)	729, 1615, 1981
HpyCH4IV	ACGT	3 cut(s)	209, 1285, 1459
HpyF10VI	GCNNNNNNNGC	2 cut(s)	972, 981
HpyF3I	CTNAG	6 cut(s)	608, 613, 1365, 1465, 1603, 1673
HpySE526I	ACGT	3 cut(s)	209, 1285, 1459
Hsp92II	CATG	5 cut(s)	272, 668, 744, 1579, 1973
Kpn2I	TCCGGA	1 cut(s)	1650
KpnI	GGTACC	1 cut(s)	436
Kzo9I	GATC	4 cut(s)	653, 775, 1310, 1570
LmnI	GCTCC	3 cut(s)	457, 649, 1353
Lsp1109I	GCAGC	6 cut(s)	950, 978, 996, 1552, 1655, 1837
LweI	GCATC	7 cut(s)	212, 463, 574, 633, 978, 1198, 1669
MaeI	CTAG	2 cut(s)	1383, 1895
MaeII	ACGT	3 cut(s)	209, 1285, 1459
MaeIII	GTNAC	3 cut(s)	1460, 1552, 1719
MalI	GATC	4 cut(s)	655, 777, 1312, 1572
MboI	GATC	4 cut(s)	653, 775, 1310, 1570
MfeI	CAATTG	1 cut(s)	745
MflI	RGATCY	3 cut(s)	653, 1310, 1570
MhlI	GDGCHC	1 cut(s)	614
MlyI	GAGTC	5 cut(s)	44, 182, 514, 1222, 1760
MmeI	TCCRAC	2 cut(s)	378, 473
MroI	TCCGGA	1 cut(s)	1650
MseI	TTAA	8 cut(s)	93, 120, 444, 560, 890, 1179, 1422, 1638
MslI	CAYNNNNRTG	1 cut(s)	1223
MspA1I	CMGCKG	1 cut(s)	963
MspI	CCGG	3 cut(s)	39, 483, 1651
MspR9I	CCNGG	3 cut(s)	40, 1521, 1539
MunI	CAATTG	1 cut(s)	745
Mva1269I	GAATGC	1 cut(s)	752
MvaI	CCWGG	2 cut(s)	1521, 1539
MvnI	CGCG	2 cut(s)	158, 582
MwoI	GCNNNNNNNGC	2 cut(s)	972, 981
NciI	CCSGG	1 cut(s)	40
NdeI	CATATG	1 cut(s)	1902
NdeII	GATC	4 cut(s)	653, 775, 1310, 1570
NlaIII	CATG	5 cut(s)	272, 668, 744, 1579, 1973
NlaIV	GGNNCC	5 cut(s)	184, 434, 834, 1173, 1536
NmuCI	GTSAC	2 cut(s)	1552, 1719
NspI	RCATGY	1 cut(s)	744
PagI	TCATGA	1 cut(s)	664
PctI	GAATGC	1 cut(s)	752
PfeI	GAWTC	9 cut(s)	278, 576, 602, 632, 920, 1043, 1202, 1524, 1586
PfoI	TCCNGGA	2 cut(s)	38, 1519
PkrI	GCNGC	8 cut(s)	965, 968, 986, 1073, 1213, 1567, 1645, 1852
PleI	GAGTC	5 cut(s)	43, 182, 513, 1222, 1759
PpsI	GAGTC	5 cut(s)	43, 182, 513, 1222, 1759
PpuMI	RGGWCCY	1 cut(s)	1172
PshAI	GACNNNNGTC	1 cut(s)	1170
PsiI	TTATAA	2 cut(s)	939, 1098
Psp124BI	GAGCTC	1 cut(s)	614
Psp5II	RGGWCCY	1 cut(s)	1172
Psp6I	CCWGG	2 cut(s)	1519, 1537
PspEI	GGTNACC	1 cut(s)	1719
PspGI	CCWGG	2 cut(s)	1519, 1537
PspN4I	GGNNCC	5 cut(s)	184, 434, 834, 1173, 1536
PspPI	GGNCC	6 cut(s)	313, 832, 1133, 1172, 1417, 1618
PspPPI	RGGWCCY	1 cut(s)	1172
PsrI	GAACNNNNNNTAC	2 cut(s)	1445, 1477
PstI	CTGCAG	5 cut(s)	420, 540, 968, 1855, 2010
PsuI	RGATCY	3 cut(s)	653, 1310, 1570
PvuII	CAGCTG	1 cut(s)	963
RsaI	GTAC	1 cut(s)	434
RsaNI	GTAC	1 cut(s)	433
RseI	CAYNNNNRTG	1 cut(s)	1223
SacI	GAGCTC	1 cut(s)	614
SaqAI	TTAA	8 cut(s)	93, 120, 444, 560, 890, 1179, 1422, 1638
SatI	GCNGC	8 cut(s)	964, 967, 985, 1072, 1212, 1566, 1644, 1851
Sau3AI	GATC	4 cut(s)	653, 775, 1310, 1570
Sau96I	GGNCC	6 cut(s)	313, 832, 1133, 1172, 1417, 1618
SchI	GAGTC	5 cut(s)	44, 182, 514, 1222, 1760
ScrFI	CCNGG	3 cut(s)	40, 1521, 1539
SduI	GDGCHC	1 cut(s)	614
SfaNI	GCATC	7 cut(s)	212, 463, 574, 633, 978, 1198, 1669
SfcI	CTRYAG	5 cut(s)	416, 536, 964, 1851, 2006
SinI	GGWCC	5 cut(s)	313, 832, 1133, 1172, 1618
SmiMI	CAYNNNNRTG	1 cut(s)	1223
SsiI	CCGC	8 cut(s)	102, 580, 1072, 1211, 1351, 1568, 1807, 1830
SspMI	CTAG	2 cut(s)	1383, 1895
SstI	GAGCTC	1 cut(s)	614
StyD4I	CCNGG	3 cut(s)	38, 1519, 1537
StyI	CCWWGG	2 cut(s)	783, 1530
TaaI	ACNGT	3 cut(s)	729, 1615, 1981
TaiI	ACGT	3 cut(s)	212, 1288, 1462
TaqI	TCGA	7 cut(s)	508, 774, 1143, 1330, 1754, 1846, 1952
TauI	GCSGC	2 cut(s)	1074, 1214
TfiI	GAWTC	9 cut(s)	278, 576, 602, 632, 920, 1043, 1202, 1524, 1586
Tru1I	TTAA	8 cut(s)	93, 120, 444, 560, 890, 1179, 1422, 1638
Tru9I	TTAA	8 cut(s)	93, 120, 444, 560, 890, 1179, 1422, 1638
TscAI	CASTG	4 cut(s)	306, 1033, 1159, 1984
TseFI	GTSAC	2 cut(s)	1552, 1719
TseI	GCWGC	6 cut(s)	963, 966, 984, 1565, 1643, 1850
Tsp45I	GTSAC	2 cut(s)	1552, 1719
TspGWI	ACGGA	1 cut(s)	52
TspRI	CASTG	4 cut(s)	306, 1033, 1159, 1984
VpaK11BI	GGWCC	5 cut(s)	313, 832, 1133, 1172, 1618
XapI	RAATTY	4 cut(s)	254, 821, 880, 1323
XbaI	TCTAGA	1 cut(s)	1382
XceI	RCATGY	1 cut(s)	744
XcmI	CCANNNNNNNNNTGG	2 cut(s)	595, 903
XspI	CTAG	2 cut(s)	1383, 1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.