Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0008349

Physical Location & Seq

Genomic Coordinates Reverse (-)

20254854 .. 20260857

Gene Structure 6004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG095500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGCGTGGTCTTGGAAAGAAATCATCTGTTCAGGAGTCTGGGAAATCTCATTACTCAACCCCTTTGTCAAAGCTATTATCATCAGCAAAATTTAAGAAAGGCGGAAAAGTTTCCCATGTTAAAAAGGTAAAACCAAAATCCAAGACGACTATTGCTTCATCCTTGTTGAAGAGAAGAAGTGCTGACTCGTCAAGGAAGGGAACAAAAAATAATGATACAAGTAAGAAATTGACAACTAGAAAAGGATTACATGAAGCATGTGATGCAGATTATTCAAACAAGTCATCTTCAGTGAAACTTCAGAATGAAAAGTTCTCAAAGGATGGCTCCGATGAGAAAGGGGAAAATGCCGATGGGGAAACCAGAATTAGAAAAAGGAGAAGAAAGAAGAAAAGCAAAAAGAATAAAGTGGATGTAGATGAAACTGCTCGCTTGCAGAGGAGGACAAGGTACCTGTTAATTAAAATAAAATTGGAGCAGAACCTGATTGATGCTTATTCTGGTGAAGGTTGGAAGGGTCAGAGTCGAGAAAAGATTAAGCCAGAAAAAGAACTACAGAGAGCCGAGAATCAGATTTTGAAGTGCAAGCTTGGAATCCGTGATGCTATTCATCAGCTACATTCACTAGGTTCAGTGGGAAGCATTGCAGACTCTGTCATTGATCCAGATGGATCTGTTTATCATGAACATATATTCTGCGCGAAGTGCAAGTTGAATGAAGCTTTCCCGGATAATGATATTGTACTGTGTGATGGGACATGCAATGCTGCATTCCACCAAAAATGTCTTGATCCTCCCTTGGATACTGAAAATATTCCTCGAGGAGATCAAGGCTGGTTTTGCAAATTTTGTGAGTGTAAAATGGAAATACTAGAAGTAGTCAATGCTCATCTTGGGACCTGCTTTTCCATGGATAGTACTTGGCAGGATGTTTTCAAGGAAGAAGCTGCTTTTCCTGATGGTGGGAATTTATTATTAAATCCAGATGAAGAATGGCCTTCAGATGAGTCTGATGACGATGATTATAATCCAGATAGGAATGTAAACAGTTGTAGCATCAGCAGGGAAGGTAGTGATGAAAATGCATCAGATGACGAATTGTCAACTGACGGCAGCGTAGGTTCTGATGAATCTACCGACGGAGATATTGTTTCTGGCCGCAGACAGAGAAGTAGTGTTGATTATAAGAAGTTATATGATGAAATGTTTGGAAAGGAAGGTCCTGTGCTGGAGCAAGTTAGTGATGATGAAGACTGGGGTCCTGGTAAAAGAAAGCGAAGAGAAAAAGAATCTGATGCTGCCAGCACTCTTATGACTCTCTATGAGAGTGAGAGAAATCCAGATGCTATCCCTACAGAAGTGAAAAGTAAACCTACTACTGATACGCAAGTCAGAAGGTCATGTTTCCGGATTCCTCGCAATGCGGTTGAGGTATTAGCTCATAACACTTTCAGGCAGAGTTGTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox PHD

Protein Analysis

489

Amino Acids

54.82

Weight (kDa)

7.83

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	233 - 284	4.2e-10	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29940 AT4G29940
fragaria_vesca	FvH4_4g07290 FvH4_4g07290
malus_domestica	MD13G1241800.v1.1 MD16G1248700.v1.1
prunus_persica	Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1
pyrus_communis	pycom13g21370 pycom16g20840
rosa_chinensis	RchiOBHm_Chr4g0399601
rosa_laevigata	RLG00000009259
rosa_multiflora	Rmu_sc0002285.1_g000037
rosa_roxburghii	Rroxscaffold_5G00344520
rosa_rugosa	Rorug04G0017600
rosa_samantha	Rh4AG095500 Rh4BG093000 Rh4CG104000 Rh4DG087900
rosa_wichuraiana	Rw4G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1026, 1185
AbsI	CCTCGAGG	1 cut(s)	819
Acc36I	ACCTGC	1 cut(s)	908
Acc65I	GGTACC	1 cut(s)	450
AccB1I	GGYRCC	1 cut(s)	450
AccII	CGCG	1 cut(s)	701
AccIII	TCCGGA	1 cut(s)	1407
AciI	CCGC	3 cut(s)	102, 1159, 1424
AclWI	GGATC	3 cut(s)	656, 679, 785
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	3 cut(s)	89, 845, 967
AcuI	CTGAAG	3 cut(s)	273, 284, 984
AfaI	GTAC	3 cut(s)	452, 744, 919
AfiI	CCNNNNNNNGG	1 cut(s)	962
AgsI	TTSAA	5 cut(s)	169, 276, 580, 715, 937
AhdI	GACNNNNNGTC	1 cut(s)	1099
AjnI	CCWGG	1 cut(s)	1261
AluBI	AGCT	6 cut(s)	73, 589, 616, 722, 947, 1439
AluI	AGCT	6 cut(s)	73, 589, 616, 722, 947, 1439
AlwI	GGATC	3 cut(s)	656, 679, 785
AlwNI	CAGNNNCTG	2 cut(s)	484, 653
Ama87I	CYCGRG	1 cut(s)	819
Aor13HI	TCCGGA	1 cut(s)	1407
AoxI	GGCC	2 cut(s)	995, 1156
ApeKI	GCWGC	4 cut(s)	767, 947, 1113, 1298
ApoI	RAATTY	3 cut(s)	89, 845, 967
Asp700I	GAANNNNTTC	2 cut(s)	109, 813
Asp718I	GGTACC	1 cut(s)	450
AspLEI	GCGC	1 cut(s)	701
AspS9I	GGNCC	3 cut(s)	897, 1220, 1259
AsuC2I	CCSGG	1 cut(s)	728
AsuHPI	GGTGA	1 cut(s)	515
AvaI	CYCGRG	1 cut(s)	819
AvaII	GGWCC	3 cut(s)	897, 1220, 1259
BaeI	ACNNNNGTAYC	2 cut(s)	1374, 1407
BanI	GGYRCC	1 cut(s)	450
BbsI	GAAGAC	1 cut(s)	1257
BbvI	GCAGC	4 cut(s)	754, 934, 1125, 1285
BccI	CCATC	5 cut(s)	317, 347, 662, 746, 953
BceAI	ACGGC	1 cut(s)	1126
BciT130I	CCWGG	1 cut(s)	1263
BciVI	GTATCC	1 cut(s)	796
BcnI	CCSGG	1 cut(s)	728
BfaI	CTAG	3 cut(s)	237, 626, 872
BfmI	CTRYAG	2 cut(s)	554, 1353
BfuAI	ACCTGC	1 cut(s)	908
BfuI	GTATCC	1 cut(s)	796
BisI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
BlsI	GCNGC	5 cut(s)	769, 949, 1115, 1160, 1300
BmcAI	AGTACT	1 cut(s)	919
Bme1390I	CCNGG	2 cut(s)	728, 1263
Bme18I	GGWCC	3 cut(s)	897, 1220, 1259
BmeRI	GACNNNNNGTC	1 cut(s)	1099
BmeT110I	CYCGRG	1 cut(s)	819
BmgT120I	GGNCC	3 cut(s)	897, 1220, 1259
BmiI	GGNNCC	4 cut(s)	328, 452, 898, 1260
BmrFI	CCNGG	2 cut(s)	728, 1263
BmrI	ACTGGG	1 cut(s)	1264
BmsI	GCATC	7 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333
BmuI	ACTGGG	1 cut(s)	1264
BoxI	GACNNNNGTC	1 cut(s)	1257
BpiI	GAAGAC	1 cut(s)	1257
BpmI	CTGGAG	1 cut(s)	1250
BpuMI	CCSGG	1 cut(s)	728
BsaBI	GATNNNNATC	1 cut(s)	1026
BsaJI	CCNNGG	2 cut(s)	798, 909
BsaWI	WCCGGW	1 cut(s)	1407
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	1 cut(s)	962
Bse1I	ACTGG	1 cut(s)	1259
Bse3DI	GCAATG	3 cut(s)	642, 769, 1426
Bse8I	GATNNNNATC	1 cut(s)	1026
BseAI	TCCGGA	1 cut(s)	1407
BseBI	CCWGG	1 cut(s)	1263
BseDI	CCNNGG	2 cut(s)	798, 909
BseGI	GGATG	4 cut(s)	158, 328, 418, 934
BseJI	GATNNNNATC	1 cut(s)	1026
BseLI	CCNNNNNNNGG	1 cut(s)	962
BseMI	GCAATG	3 cut(s)	642, 769, 1426
BseNI	ACTGG	1 cut(s)	1259
BseRI	GAGGAG	2 cut(s)	454, 837
BseXI	GCAGC	4 cut(s)	754, 934, 1125, 1285
Bsh1236I	CGCG	1 cut(s)	701
BshFI	GGCC	2 cut(s)	997, 1158
BshNI	GGYRCC	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	819
BsiSI	CCGG	2 cut(s)	728, 1408
BslFI	GGGAC	2 cut(s)	769, 910
BslI	CCNNNNNNNGG	1 cut(s)	962
BsmFI	GGGAC	2 cut(s)	769, 910
BsmI	GAATGC	1 cut(s)	770
BsnI	GGCC	2 cut(s)	997, 1158
BsoBI	CYCGRG	1 cut(s)	819
Bsp13I	TCCGGA	1 cut(s)	1407
Bsp143I	GATC	4 cut(s)	661, 671, 790, 826
Bsp19I	CCATGG	1 cut(s)	909
BspACI	CCGC	3 cut(s)	102, 1159, 1424
BspANI	GGCC	2 cut(s)	997, 1158
BspEI	TCCGGA	1 cut(s)	1407
BspFNI	CGCG	1 cut(s)	701
BspHI	TCATGA	1 cut(s)	682
BspLI	GGNNCC	4 cut(s)	328, 452, 898, 1260
BspMI	ACCTGC	1 cut(s)	908
BspPI	GGATC	3 cut(s)	656, 679, 785
BspT107I	GGYRCC	1 cut(s)	450
BsrDI	GCAATG	3 cut(s)	642, 769, 1426
BsrI	ACTGG	1 cut(s)	1259
BssECI	CCNNGG	2 cut(s)	798, 909
BssMI	GATC	4 cut(s)	661, 671, 790, 826
BssT1I	CCWWGG	2 cut(s)	798, 909
Bst2UI	CCWGG	1 cut(s)	1263
Bst4CI	ACNGT	2 cut(s)	747, 1049
Bst6I	CTCTTC	2 cut(s)	164, 1273
BstAPI	GCANNNNNTGC	1 cut(s)	263
BstC8I	GCNNGC	4 cut(s)	430, 434, 587, 1303
BstDSI	CCRYGG	1 cut(s)	909
BstF5I	GGATG	4 cut(s)	158, 328, 418, 934
BstFNI	CGCG	1 cut(s)	701
BstHHI	GCGC	1 cut(s)	701
BstKTI	GATC	4 cut(s)	664, 674, 793, 829
BstMBI	GATC	4 cut(s)	661, 671, 790, 826
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
BstNI	CCWGG	1 cut(s)	1263
BstNSI	RCATGY	2 cut(s)	261, 762
BstPAI	GACNNNNGTC	1 cut(s)	1257
BstSCI	CCNGG	2 cut(s)	726, 1261
BstSFI	CTRYAG	2 cut(s)	554, 1353
BstUI	CGCG	1 cut(s)	701
BstV1I	GCAGC	4 cut(s)	754, 934, 1125, 1285
BstV2I	GAAGAC	1 cut(s)	1257
BstX2I	RGATCY	1 cut(s)	671
BstYI	RGATCY	1 cut(s)	671
BsuI	GTATCC	1 cut(s)	796
BsuRI	GGCC	2 cut(s)	997, 1158
BtgI	CCRYGG	1 cut(s)	909
BtsCI	GGATG	4 cut(s)	158, 328, 418, 934
BtsIMutI	CAGTG	2 cut(s)	297, 639
BveI	ACCTGC	1 cut(s)	908
Cac8I	GCNNGC	4 cut(s)	430, 434, 587, 1303
CaiI	CAGNNNCTG	2 cut(s)	484, 653
CciI	TCATGA	1 cut(s)	682
CfoI	GCGC	1 cut(s)	701
Cfr13I	GGNCC	3 cut(s)	897, 1220, 1259
Csp6I	GTAC	3 cut(s)	451, 743, 918
CviAII	CATG	7 cut(s)	116, 251, 258, 683, 759, 910, 1401
CviQI	GTAC	3 cut(s)	451, 743, 918
DpnI	GATC	4 cut(s)	663, 673, 792, 828
DpnII	GATC	4 cut(s)	661, 671, 790, 826
DriI	GACNNNNNGTC	1 cut(s)	1099
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	2 cut(s)	164, 1273
Eam1105I	GACNNNNNGTC	1 cut(s)	1099
EarI	CTCTTC	2 cut(s)	164, 1273
EciI	GGCGGA	1 cut(s)	117
Eco130I	CCWWGG	2 cut(s)	798, 909
Eco47I	GGWCC	3 cut(s)	897, 1220, 1259
Eco57I	CTGAAG	3 cut(s)	273, 284, 984
Eco88I	CYCGRG	1 cut(s)	819
EcoO109I	RGGNCCY	3 cut(s)	897, 1220, 1259
EcoRII	CCWGG	1 cut(s)	1261
EcoT14I	CCWWGG	2 cut(s)	798, 909
EcoT22I	ATGCAT	1 cut(s)	1087
ErhI	CCWWGG	2 cut(s)	798, 909
FaeI	CATG	7 cut(s)	119, 254, 261, 686, 762, 913, 1404
FaqI	GGGAC	2 cut(s)	769, 910
FatI	CATG	7 cut(s)	115, 250, 257, 682, 758, 909, 1400
Fnu4HI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
FokI	GGATG	4 cut(s)	145, 335, 425, 941
Fsp4HI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
FspBI	CTAG	3 cut(s)	237, 626, 872
GlaI	GCGC	1 cut(s)	700
GluI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
GsuI	CTGGAG	1 cut(s)	1250
HaeIII	GGCC	2 cut(s)	997, 1158
HapII	CCGG	2 cut(s)	728, 1408
HhaI	GCGC	1 cut(s)	701
Hin1II	CATG	7 cut(s)	119, 254, 261, 686, 762, 913, 1404
Hin6I	GCGC	1 cut(s)	699
HinP1I	GCGC	1 cut(s)	699
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HindIII	AAGCTT	2 cut(s)	587, 720
HpaII	CCGG	2 cut(s)	728, 1408
HphI	GGTGA	1 cut(s)	515
Hpy166II	GTNNAC	3 cut(s)	1045, 1104, 1370
Hpy8I	GTNNAC	3 cut(s)	1045, 1104, 1370
Hpy99I	CGWCG	1 cut(s)	1142
HpyAV	CCTTC	7 cut(s)	190, 500, 508, 1008, 1061, 1211, 1389
HpyCH4III	ACNGT	2 cut(s)	747, 1049
HpyCH4V	TGCA	9 cut(s)	266, 436, 585, 647, 708, 762, 770, 843, 1085
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
Hsp92II	CATG	7 cut(s)	119, 254, 261, 686, 762, 913, 1404
HspAI	GCGC	1 cut(s)	699
Kpn2I	TCCGGA	1 cut(s)	1407
KpnI	GGTACC	1 cut(s)	454
Kzo9I	GATC	4 cut(s)	661, 671, 790, 826
LmnI	GCTCC	3 cut(s)	332, 475, 1231
Lsp1109I	GCAGC	4 cut(s)	754, 934, 1125, 1285
LweI	GCATC	7 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333
MaeI	CTAG	3 cut(s)	237, 626, 872
MalI	GATC	4 cut(s)	663, 673, 792, 828
MboI	GATC	4 cut(s)	661, 671, 790, 826
MboII	GAAGA	9 cut(s)	181, 186, 279, 393, 400, 953, 1001, 1262, 1290
MflI	RGATCY	1 cut(s)	671
MluCI	AATT	8 cut(s)	89, 227, 366, 459, 470, 845, 967, 1097
MlyI	GAGTC	6 cut(s)	44, 179, 532, 644, 1016, 1309
MmeI	TCCRAC	1 cut(s)	491
MnlI	CCTC	7 cut(s)	432, 435, 804, 815, 828, 1423, 1425
Mph1103I	ATGCAT	1 cut(s)	1087
MroI	TCCGGA	1 cut(s)	1407
MroXI	GAANNNNTTC	2 cut(s)	109, 813
MseI	TTAA	6 cut(s)	93, 120, 458, 462, 537, 977
MslI	CAYNNNNRTG	1 cut(s)	1310
MspI	CCGG	2 cut(s)	728, 1408
MspR9I	CCNGG	2 cut(s)	728, 1263
Mva1269I	GAATGC	1 cut(s)	770
MvaI	CCWGG	1 cut(s)	1263
MvnI	CGCG	1 cut(s)	701
MwoI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
NciI	CCSGG	1 cut(s)	728
NcoI	CCATGG	1 cut(s)	909
NdeII	GATC	4 cut(s)	661, 671, 790, 826
NlaIII	CATG	7 cut(s)	119, 254, 261, 686, 762, 913, 1404
NlaIV	GGNNCC	4 cut(s)	328, 452, 898, 1260
NmeAIII	GCCGAG	1 cut(s)	589
NsiI	ATGCAT	1 cut(s)	1087
NspI	RCATGY	2 cut(s)	261, 762
PacI	TTAATTAA	1 cut(s)	462
PaeR7I	CTCGAG	1 cut(s)	819
PagI	TCATGA	1 cut(s)	682
PctI	GAATGC	1 cut(s)	770
PdmI	GAANNNNTTC	2 cut(s)	109, 813
PfeI	GAWTC	5 cut(s)	568, 594, 1130, 1289, 1411
PflFI	GACNNNGTC	1 cut(s)	653
PfoI	TCCNGGA	1 cut(s)	726
PkrI	GCNGC	5 cut(s)	769, 949, 1115, 1160, 1300
PleI	GAGTC	6 cut(s)	43, 179, 531, 644, 1015, 1309
PpsI	GAGTC	6 cut(s)	43, 179, 531, 644, 1015, 1309
PpuMI	RGGWCCY	3 cut(s)	897, 1220, 1259
PshAI	GACNNNNGTC	1 cut(s)	1257
PsiI	TTATAA	2 cut(s)	1026, 1185
Psp5II	RGGWCCY	3 cut(s)	897, 1220, 1259
Psp6I	CCWGG	1 cut(s)	1261
PspGI	CCWGG	1 cut(s)	1261
PspN4I	GGNNCC	4 cut(s)	328, 452, 898, 1260
PspPI	GGNCC	3 cut(s)	897, 1220, 1259
PspPPI	RGGWCCY	3 cut(s)	897, 1220, 1259
PspXI	VCTCGAGB	1 cut(s)	819
PstNI	CAGNNNCTG	2 cut(s)	484, 653
PsuI	RGATCY	1 cut(s)	671
PsyI	GACNNNGTC	1 cut(s)	653
RsaI	GTAC	3 cut(s)	452, 744, 919
RsaNI	GTAC	3 cut(s)	451, 743, 918
RseI	CAYNNNNRTG	1 cut(s)	1310
SaqAI	TTAA	6 cut(s)	93, 120, 458, 462, 537, 977
SatI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
Sau3AI	GATC	4 cut(s)	661, 671, 790, 826
Sau96I	GGNCC	3 cut(s)	897, 1220, 1259
ScaI	AGTACT	1 cut(s)	919
SchI	GAGTC	6 cut(s)	44, 179, 532, 644, 1016, 1309
ScrFI	CCNGG	2 cut(s)	728, 1263
SfaNI	GCATC	7 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333
SfcI	CTRYAG	2 cut(s)	554, 1353
Sfr274I	CTCGAG	1 cut(s)	819
SinI	GGWCC	3 cut(s)	897, 1220, 1259
SlaI	CTCGAG	1 cut(s)	819
SmiMI	CAYNNNNRTG	1 cut(s)	1310
SmlI	CTYRAG	1 cut(s)	819
SmoI	CTYRAG	1 cut(s)	819
Sse9I	AATT	8 cut(s)	89, 227, 366, 459, 470, 845, 967, 1097
SsiI	CCGC	3 cut(s)	102, 1159, 1424
SspI	AATATT	1 cut(s)	814
SspMI	CTAG	3 cut(s)	237, 626, 872
StyD4I	CCNGG	2 cut(s)	726, 1261
StyI	CCWWGG	2 cut(s)	798, 909
TaaI	ACNGT	2 cut(s)	747, 1049
TaqI	TCGA	2 cut(s)	526, 820
TasI	AATT	8 cut(s)	89, 227, 366, 459, 470, 845, 967, 1097
TatI	WGTACW	2 cut(s)	742, 917
TauI	GCSGC	1 cut(s)	1161
TfiI	GAWTC	5 cut(s)	568, 594, 1130, 1289, 1411
Tru1I	TTAA	6 cut(s)	93, 120, 458, 462, 537, 977
Tru9I	TTAA	6 cut(s)	93, 120, 458, 462, 537, 977
TscAI	CASTG	2 cut(s)	297, 639
TseI	GCWGC	4 cut(s)	767, 947, 1113, 1298
TspGWI	ACGGA	2 cut(s)	587, 1155
TspRI	CASTG	2 cut(s)	297, 639
Tth111I	GACNNNGTC	1 cut(s)	653
VpaK11BI	GGWCC	3 cut(s)	897, 1220, 1259
XapI	RAATTY	3 cut(s)	89, 845, 967
XceI	RCATGY	2 cut(s)	261, 762
XcmI	CCANNNNNNNNNTGG	1 cut(s)	990
XhoI	CTCGAG	1 cut(s)	819
XmnI	GAANNNNTTC	2 cut(s)	109, 813
XspI	CTAG	3 cut(s)	237, 626, 872
ZrmI	AGTACT	1 cut(s)	919
Zsp2I	ATGCAT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.