Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0008349

Physical Location & Seq

Genomic Coordinates Reverse (-)

13390144 .. 13394601

Gene Structure 4458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG087900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGCGTGGTCTTGGAAAGAAATCATCTGTTCAGGAGTCTGGGAAATCTCATTACTCAACTCCTTTGTCAAAGCTATTATCATCAGCAAAATTTAAGAAAGGCGGAAAAGTTTCCCATATTAAAAAGGTAAAACCAAAATCCAAGACGACTATTGCTTCATCCTTGTTGAAGAGAAGAAGTGCTGACTCGTCAAGGAAGGGAACAAAAAATAATGATACAAGTAAGAAATTGACAACTAGAAAAGGATTACATAAAGCACGTGATGCAGATTATTCAAACAAGTCATCTTCAGTGAAACTTCAGAATGAAAAGTTCTCAAAGGATGGCTCCGATGAGAAAGGGGAAAATGCCGATGGGGAAACCAGAATTAGAAAAAGGAGAAGAAAGAAGAAAAGCAAAAAGAATAAAGTGGATGTAGATGAAACTGCTCGCTTGCAGAGGAGGACAAGGTACCTGTTAATTAAAATAAAATTGGAGCAGAACCTGATTGATGCTTATTCTGGTGAAGGTTGGAAGGGTCAGAGTCGAGAAAAAATTAAGCCAGAAAAAGAACTACAGAGAGCCGAGAATCAGATTTTGAAGTGCAAGCTTGGAATCCGTGATGCTATTCATCAGCTACATTCACTAGGTTCAGTGGGAAGCATTGCAGACTCTGTCATTGATCCAGATGGATCTGTTTATCATGAACATATATTCTGCGCGAAGTGCAAGTTGAACGAAGCTTTCCCTGATAATGATATTGTACTGTGTGATGGGACATGCAATGCTGCATTCCACCAAAAATGTCTTGATCCTCCCTTGGATACTGAAAATATTCCTCGAGGAGATCAAGGCTGGTTTTGCAAATTTTGTGAGTGTAAAATGGAAATACTAGAAGTAGTCAATGCTCATCTTGGGACCTGCTTTTCCATGGATAGTACTTGGCAGGATGTTTTCAAGGAAGAAGCTGCTTTTCCTGATGGTGGGAATTTATTATTAAATCCAGATGAAGAATGGCCTTCAGATGAGTCTGATGACGATGATTATAATCCAGATAGGAATGTAAACAGTTGTAGCATCAGCAGGGAAGGTAGTGATGAAAATGCATCAGATGACGAATTGTCAACTGACGGCAGCGTAGGTTCTGATGAATCTACCGATGGAGATATTGTTTCTGGCCGCAGACAGAGAAGTAGTGTTGATTATAAGAAGTTATATGATGAAATGTTTGGAAAGGAAGGTCCTGTGCTGGAGCAAGTTAGTGATGATGAAGACTGGGGTCCTGGTAAAAGAAAGCGAAGAGAAAAAGAATCTGATGCTGCCAGCACTCTTTTGACTCTCTATGAGAGTGAGAGAAATCCAGATGCTGTCCCTACAGAAGTGAAAAGTAAACCTACTACTGATACGCAAGTCAGAAGGTCATGTTTCCGGATTCCTCGCAATGCGGTTGAGAAGCTCCGCCAAGTGTTTTCTGAAAATGAACTTCCTTCTAAAGCTGTCAAGGATAATCTTTCCAAAGAGTTGGGCCTTGATCCTGAGAAGGTTAGTAAATGGTTCAAGAACACACGCTACCTGGCTCTTAAAACCAGAAAGGCAGAGGGAACCAAAAACCTTCACACTTCTGCTTCTGAAATCAACAAGGAATCCAGATATGAAAATGTGACAGGAAAAGCTGTTGATCTCATGGCATCTGATTTTGAAGACACCTCAACTGAAACTGTGGTCCATTCCCCAAGGAATATTAAGAAGTCCTTCCGGAGAAAGCATCCAAAGTCATTAAGTAGCACTCAGAAAAAAAATCAACAGAAAGGATCTTCATGTTTGTCTCCTGCAAAGAGCAATAAGGATGGAATGGAATTGAGTGATGATGTGAGCTTGAAGAAGCTTTTGAAAGGAAGAACAAAGGAGAAGCGAGCCAACATTATTGCTGGAAGTGGAGGTGAGTCTCAAGTTTCAGAACTGGAAATGGAGAGACTATGTAAAGCCAAAGGTAGGCTAGAAAATATGAGACAGAAATTACTAAAGTTTCAAATAGCCAAGGCAAAGAAATCAAAAAAGCCTCCACCTCATGAACAGAGTGTCATTTATGTTCCAGTAGCAGAACTAAAAGAAAAGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox PHD

Protein Analysis

699

Amino Acids

78.48

Weight (kDa)

9.23

Isoelectric Point (pI)

38.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	233 - 284	6.2e-10	PHD-finger
Homeodomain	PF00046	472 - 517	2.3e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29940 AT4G29940
fragaria_vesca	FvH4_4g07290 FvH4_4g07290
malus_domestica	MD13G1241800.v1.1 MD16G1248700.v1.1
prunus_persica	Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1
pyrus_communis	pycom13g21370 pycom16g20840
rosa_chinensis	RchiOBHm_Chr4g0399601
rosa_laevigata	RLG00000009259
rosa_multiflora	Rmu_sc0002285.1_g000037
rosa_roxburghii	Rroxscaffold_5G00344520
rosa_rugosa	Rorug04G0017600
rosa_samantha	Rh4AG095500 Rh4BG093000 Rh4CG104000 Rh4DG087900
rosa_wichuraiana	Rw4G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1026, 1185
AbsI	CCTCGAGG	1 cut(s)	819
Acc36I	ACCTGC	1 cut(s)	908
Acc65I	GGTACC	1 cut(s)	450
AccB1I	GGYRCC	1 cut(s)	450
AccII	CGCG	1 cut(s)	701
AccIII	TCCGGA	2 cut(s)	1407, 1734
AciI	CCGC	4 cut(s)	102, 1159, 1424, 1438
AclWI	GGATC	5 cut(s)	656, 679, 785, 1505, 1798
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	3 cut(s)	89, 845, 967
AcuI	CTGAAG	3 cut(s)	273, 284, 984
AcvI	CACGTG	1 cut(s)	260
AfaI	GTAC	3 cut(s)	452, 744, 919
AfiI	CCNNNNNNNGG	2 cut(s)	962, 1971
AhdI	GACNNNNNGTC	1 cut(s)	1099
AjnI	CCWGG	2 cut(s)	1261, 1551
Alw26I	GTCTC	4 cut(s)	1809, 1929, 1945, 1981
AlwI	GGATC	5 cut(s)	656, 679, 785, 1505, 1798
AlwNI	CAGNNNCTG	3 cut(s)	484, 653, 1346
Ama87I	CYCGRG	1 cut(s)	819
Aor13HI	TCCGGA	2 cut(s)	1407, 1734
AoxI	GGCC	3 cut(s)	995, 1156, 1504
ApeKI	GCWGC	4 cut(s)	767, 947, 1113, 1298
ApoI	RAATTY	3 cut(s)	89, 845, 967
Asp700I	GAANNNNTTC	3 cut(s)	109, 813, 1730
Asp718I	GGTACC	1 cut(s)	450
AspLEI	GCGC	1 cut(s)	701
AspS9I	GGNCC	5 cut(s)	897, 1220, 1259, 1504, 1702
AsuHPI	GGTGA	2 cut(s)	515, 1931
AvaI	CYCGRG	1 cut(s)	819
AvaII	GGWCC	4 cut(s)	897, 1220, 1259, 1702
BaeI	ACNNNNGTAYC	2 cut(s)	1374, 1407
BanI	GGYRCC	1 cut(s)	450
BbrPI	CACGTG	1 cut(s)	260
BbsI	GAAGAC	2 cut(s)	1257, 1686
BbvI	GCAGC	4 cut(s)	754, 934, 1125, 1285
BccI	CCATC	7 cut(s)	317, 347, 662, 746, 953, 1133, 1820
BceAI	ACGGC	1 cut(s)	1126
BciT130I	CCWGG	2 cut(s)	1263, 1553
BciVI	GTATCC	1 cut(s)	796
BcoDI	GTCTC	4 cut(s)	1809, 1929, 1945, 1981
BfaI	CTAG	4 cut(s)	237, 626, 872, 1976
BfmI	CTRYAG	2 cut(s)	554, 1353
BfuAI	ACCTGC	1 cut(s)	908
BfuI	GTATCC	1 cut(s)	796
BisI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
BlsI	GCNGC	5 cut(s)	769, 949, 1115, 1160, 1300
BmcAI	AGTACT	1 cut(s)	919
Bme1390I	CCNGG	2 cut(s)	1263, 1553
Bme18I	GGWCC	4 cut(s)	897, 1220, 1259, 1702
BmeRI	GACNNNNNGTC	1 cut(s)	1099
BmeT110I	CYCGRG	1 cut(s)	819
BmgT120I	GGNCC	5 cut(s)	897, 1220, 1259, 1504, 1702
BmiI	GGNNCC	5 cut(s)	328, 452, 898, 1260, 1582
BmrFI	CCNGG	2 cut(s)	1263, 1553
BmrI	ACTGGG	1 cut(s)	1264
BmsI	GCATC	9 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333, 1676, 1753
BmuI	ACTGGG	1 cut(s)	1264
BoxI	GACNNNNGTC	1 cut(s)	1257
BpiI	GAAGAC	2 cut(s)	1257, 1686
BpmI	CTGGAG	1 cut(s)	1250
BpuEI	CTTGAG	1 cut(s)	1911
BsaAI	YACGTR	1 cut(s)	260
BsaBI	GATNNNNATC	1 cut(s)	1026
BsaJI	CCNNGG	4 cut(s)	798, 909, 1712, 2016
BsaWI	WCCGGW	2 cut(s)	1407, 1734
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	2 cut(s)	962, 1971
Bse1I	ACTGG	3 cut(s)	1259, 1944, 2072
Bse3DI	GCAATG	3 cut(s)	642, 769, 1426
Bse8I	GATNNNNATC	1 cut(s)	1026
BseAI	TCCGGA	2 cut(s)	1407, 1734
BseBI	CCWGG	2 cut(s)	1263, 1553
BseDI	CCNNGG	4 cut(s)	798, 909, 1712, 2016
BseGI	GGATG	6 cut(s)	158, 328, 418, 934, 1744, 1831
BseJI	GATNNNNATC	1 cut(s)	1026
BseLI	CCNNNNNNNGG	2 cut(s)	962, 1971
BseMI	GCAATG	3 cut(s)	642, 769, 1426
BseMII	CTCAG	2 cut(s)	1506, 1781
BseNI	ACTGG	3 cut(s)	1259, 1944, 2072
BseRI	GAGGAG	2 cut(s)	454, 837
BseXI	GCAGC	4 cut(s)	754, 934, 1125, 1285
Bsh1236I	CGCG	1 cut(s)	701
BshFI	GGCC	3 cut(s)	997, 1158, 1506
BshNI	GGYRCC	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	819
BsiSI	CCGG	2 cut(s)	1408, 1735
BslFI	GGGAC	3 cut(s)	769, 910, 1334
BslI	CCNNNNNNNGG	2 cut(s)	962, 1971
BsmAI	GTCTC	4 cut(s)	1809, 1929, 1945, 1981
BsmFI	GGGAC	3 cut(s)	769, 910, 1334
BsmI	GAATGC	1 cut(s)	770
BsnI	GGCC	3 cut(s)	997, 1158, 1506
BsoBI	CYCGRG	1 cut(s)	819
Bsp13I	TCCGGA	2 cut(s)	1407, 1734
Bsp143I	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
Bsp19I	CCATGG	1 cut(s)	909
BspACI	CCGC	4 cut(s)	102, 1159, 1424, 1438
BspANI	GGCC	3 cut(s)	997, 1158, 1506
BspCNI	CTCAG	2 cut(s)	1507, 1780
BspEI	TCCGGA	2 cut(s)	1407, 1734
BspFNI	CGCG	1 cut(s)	701
BspHI	TCATGA	2 cut(s)	682, 2047
BspLI	GGNNCC	5 cut(s)	328, 452, 898, 1260, 1582
BspMI	ACCTGC	1 cut(s)	908
BspPI	GGATC	5 cut(s)	656, 679, 785, 1505, 1798
BspT107I	GGYRCC	1 cut(s)	450
BsrDI	GCAATG	3 cut(s)	642, 769, 1426
BsrI	ACTGG	3 cut(s)	1259, 1944, 2072
BssECI	CCNNGG	4 cut(s)	798, 909, 1712, 2016
BssMI	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
BssT1I	CCWWGG	4 cut(s)	798, 909, 1712, 2016
Bst2UI	CCWGG	2 cut(s)	1263, 1553
Bst4CI	ACNGT	3 cut(s)	747, 1049, 1699
Bst6I	CTCTTC	2 cut(s)	164, 1273
BstAPI	GCANNNNNTGC	1 cut(s)	263
BstBAI	YACGTR	1 cut(s)	260
BstC8I	GCNNGC	5 cut(s)	430, 434, 587, 1303, 1893
BstDEI	CTNAG	2 cut(s)	1515, 1767
BstDSI	CCRYGG	1 cut(s)	909
BstF5I	GGATG	6 cut(s)	158, 328, 418, 934, 1744, 1831
BstFNI	CGCG	1 cut(s)	701
BstHHI	GCGC	1 cut(s)	701
BstKTI	GATC	7 cut(s)	664, 674, 793, 829, 1513, 1660, 1793
BstMAI	GTCTC	4 cut(s)	1809, 1929, 1945, 1981
BstMBI	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
BstNI	CCWGG	2 cut(s)	1263, 1553
BstNSI	RCATGY	1 cut(s)	762
BstPAI	GACNNNNGTC	1 cut(s)	1257
BstSCI	CCNGG	2 cut(s)	1261, 1551
BstSFI	CTRYAG	2 cut(s)	554, 1353
BstUI	CGCG	1 cut(s)	701
BstV1I	GCAGC	4 cut(s)	754, 934, 1125, 1285
BstV2I	GAAGAC	2 cut(s)	1257, 1686
BstX2I	RGATCY	2 cut(s)	671, 1790
BstXI	CCANNNNNNTGG	1 cut(s)	1501
BstYI	RGATCY	2 cut(s)	671, 1790
BsuI	GTATCC	1 cut(s)	796
BsuRI	GGCC	3 cut(s)	997, 1158, 1506
BtgI	CCRYGG	1 cut(s)	909
BtsCI	GGATG	6 cut(s)	158, 328, 418, 934, 1744, 1831
BtsIMutI	CAGTG	2 cut(s)	297, 639
BveI	ACCTGC	1 cut(s)	908
Cac8I	GCNNGC	5 cut(s)	430, 434, 587, 1303, 1893
CaiI	CAGNNNCTG	3 cut(s)	484, 653, 1346
CciI	TCATGA	2 cut(s)	682, 2047
CfoI	GCGC	1 cut(s)	701
Cfr13I	GGNCC	5 cut(s)	897, 1220, 1259, 1504, 1702
Csp6I	GTAC	3 cut(s)	451, 743, 918
CviAII	CATG	7 cut(s)	683, 759, 910, 1401, 1663, 1797, 2048
CviQI	GTAC	3 cut(s)	451, 743, 918
DdeI	CTNAG	2 cut(s)	1515, 1767
DpnI	GATC	7 cut(s)	663, 673, 792, 828, 1512, 1659, 1792
DpnII	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
DriI	GACNNNNNGTC	1 cut(s)	1099
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	2 cut(s)	164, 1273
Eam1105I	GACNNNNNGTC	1 cut(s)	1099
EarI	CTCTTC	2 cut(s)	164, 1273
EciI	GGCGGA	2 cut(s)	117, 1427
Eco130I	CCWWGG	4 cut(s)	798, 909, 1712, 2016
Eco47I	GGWCC	4 cut(s)	897, 1220, 1259, 1702
Eco57I	CTGAAG	3 cut(s)	273, 284, 984
Eco72I	CACGTG	1 cut(s)	260
Eco88I	CYCGRG	1 cut(s)	819
EcoO109I	RGGNCCY	3 cut(s)	897, 1220, 1259
EcoRII	CCWGG	2 cut(s)	1261, 1551
EcoT14I	CCWWGG	4 cut(s)	798, 909, 1712, 2016
EcoT22I	ATGCAT	1 cut(s)	1087
ErhI	CCWWGG	4 cut(s)	798, 909, 1712, 2016
FaeI	CATG	7 cut(s)	686, 762, 913, 1404, 1666, 1800, 2051
FalI	AAGNNNNNCTT	2 cut(s)	1715, 1747
FaqI	GGGAC	3 cut(s)	769, 910, 1334
FatI	CATG	7 cut(s)	682, 758, 909, 1400, 1662, 1796, 2047
Fnu4HI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
FokI	GGATG	6 cut(s)	145, 335, 425, 941, 1731, 1838
Fsp4HI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
FspBI	CTAG	4 cut(s)	237, 626, 872, 1976
GlaI	GCGC	1 cut(s)	700
GluI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
GsuI	CTGGAG	1 cut(s)	1250
HaeIII	GGCC	3 cut(s)	997, 1158, 1506
HapII	CCGG	2 cut(s)	1408, 1735
HhaI	GCGC	1 cut(s)	701
Hin1II	CATG	7 cut(s)	686, 762, 913, 1404, 1666, 1800, 2051
Hin6I	GCGC	1 cut(s)	699
HinP1I	GCGC	1 cut(s)	699
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HindIII	AAGCTT	3 cut(s)	587, 720, 1862
HpaII	CCGG	2 cut(s)	1408, 1735
HphI	GGTGA	2 cut(s)	515, 1931
Hpy166II	GTNNAC	3 cut(s)	1045, 1104, 1370
Hpy8I	GTNNAC	3 cut(s)	1045, 1104, 1370
HpyCH4III	ACNGT	3 cut(s)	747, 1049, 1699
HpyCH4IV	ACGT	1 cut(s)	259
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
HpyF3I	CTNAG	2 cut(s)	1515, 1767
HpySE526I	ACGT	1 cut(s)	259
Hsp92II	CATG	7 cut(s)	686, 762, 913, 1404, 1666, 1800, 2051
HspAI	GCGC	1 cut(s)	699
Kpn2I	TCCGGA	2 cut(s)	1407, 1734
KpnI	GGTACC	1 cut(s)	454
Kzo9I	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
LmnI	GCTCC	4 cut(s)	332, 475, 1231, 1440
Lsp1109I	GCAGC	4 cut(s)	754, 934, 1125, 1285
LweI	GCATC	9 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333, 1676, 1753
MaeI	CTAG	4 cut(s)	237, 626, 872, 1976
MaeII	ACGT	1 cut(s)	259
MaeIII	GTNAC	1 cut(s)	1639
MalI	GATC	7 cut(s)	663, 673, 792, 828, 1512, 1659, 1792
MboI	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
MflI	RGATCY	2 cut(s)	671, 1790
MlyI	GAGTC	7 cut(s)	44, 179, 532, 644, 1016, 1309, 1931
MmeI	TCCRAC	1 cut(s)	491
Mph1103I	ATGCAT	1 cut(s)	1087
MroI	TCCGGA	2 cut(s)	1407, 1734
MroXI	GAANNNNTTC	3 cut(s)	109, 813, 1730
MseI	TTAA	9 cut(s)	93, 120, 458, 462, 537, 977, 1560, 1722, 1757
MspI	CCGG	2 cut(s)	1408, 1735
MspR9I	CCNGG	2 cut(s)	1263, 1553
Mva1269I	GAATGC	1 cut(s)	770
MvaI	CCWGG	2 cut(s)	1263, 1553
MvnI	CGCG	1 cut(s)	701
MwoI	GCNNNNNNNGC	3 cut(s)	263, 705, 840
NcoI	CCATGG	1 cut(s)	909
NdeII	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
NlaIII	CATG	7 cut(s)	686, 762, 913, 1404, 1666, 1800, 2051
NlaIV	GGNNCC	5 cut(s)	328, 452, 898, 1260, 1582
NmeAIII	GCCGAG	1 cut(s)	589
NmuCI	GTSAC	1 cut(s)	1639
NsiI	ATGCAT	1 cut(s)	1087
NspI	RCATGY	1 cut(s)	762
PacI	TTAATTAA	1 cut(s)	462
PaeR7I	CTCGAG	1 cut(s)	819
PagI	TCATGA	2 cut(s)	682, 2047
PctI	GAATGC	1 cut(s)	770
PdmI	GAANNNNTTC	3 cut(s)	109, 813, 1730
PfeI	GAWTC	6 cut(s)	568, 594, 1130, 1289, 1411, 1622
PflFI	GACNNNGTC	1 cut(s)	653
PkrI	GCNGC	5 cut(s)	769, 949, 1115, 1160, 1300
PleI	GAGTC	7 cut(s)	43, 179, 531, 644, 1015, 1309, 1930
PmaCI	CACGTG	1 cut(s)	260
PmlI	CACGTG	1 cut(s)	260
PpsI	GAGTC	7 cut(s)	43, 179, 531, 644, 1015, 1309, 1930
Ppu21I	YACGTR	1 cut(s)	260
PpuMI	RGGWCCY	3 cut(s)	897, 1220, 1259
PshAI	GACNNNNGTC	1 cut(s)	1257
PsiI	TTATAA	2 cut(s)	1026, 1185
Psp5II	RGGWCCY	3 cut(s)	897, 1220, 1259
Psp6I	CCWGG	2 cut(s)	1261, 1551
PspCI	CACGTG	1 cut(s)	260
PspGI	CCWGG	2 cut(s)	1261, 1551
PspN4I	GGNNCC	5 cut(s)	328, 452, 898, 1260, 1582
PspPI	GGNCC	5 cut(s)	897, 1220, 1259, 1504, 1702
PspPPI	RGGWCCY	3 cut(s)	897, 1220, 1259
PspXI	VCTCGAGB	1 cut(s)	819
PsrI	GAACNNNNNNTAC	2 cut(s)	1532, 1564
PstNI	CAGNNNCTG	3 cut(s)	484, 653, 1346
PsuI	RGATCY	2 cut(s)	671, 1790
PsyI	GACNNNGTC	1 cut(s)	653
RsaI	GTAC	3 cut(s)	452, 744, 919
RsaNI	GTAC	3 cut(s)	451, 743, 918
SaqAI	TTAA	9 cut(s)	93, 120, 458, 462, 537, 977, 1560, 1722, 1757
SatI	GCNGC	5 cut(s)	768, 948, 1114, 1159, 1299
Sau3AI	GATC	7 cut(s)	661, 671, 790, 826, 1510, 1657, 1790
Sau96I	GGNCC	5 cut(s)	897, 1220, 1259, 1504, 1702
ScaI	AGTACT	1 cut(s)	919
SchI	GAGTC	7 cut(s)	44, 179, 532, 644, 1016, 1309, 1931
ScrFI	CCNGG	2 cut(s)	1263, 1553
SfaNI	GCATC	9 cut(s)	253, 481, 592, 1065, 1094, 1285, 1333, 1676, 1753
SfcI	CTRYAG	2 cut(s)	554, 1353
Sfr274I	CTCGAG	1 cut(s)	819
SinI	GGWCC	4 cut(s)	897, 1220, 1259, 1702
SlaI	CTCGAG	1 cut(s)	819
SmlI	CTYRAG	2 cut(s)	819, 1926
SmoI	CTYRAG	2 cut(s)	819, 1926
SsiI	CCGC	4 cut(s)	102, 1159, 1424, 1438
SspI	AATATT	2 cut(s)	814, 1720
SspMI	CTAG	4 cut(s)	237, 626, 872, 1976
StyD4I	CCNGG	2 cut(s)	1261, 1551
StyI	CCWWGG	4 cut(s)	798, 909, 1712, 2016
TaaI	ACNGT	3 cut(s)	747, 1049, 1699
TaiI	ACGT	1 cut(s)	262
TaqI	TCGA	2 cut(s)	526, 820
TatI	WGTACW	2 cut(s)	742, 917
TauI	GCSGC	1 cut(s)	1161
TfiI	GAWTC	6 cut(s)	568, 594, 1130, 1289, 1411, 1622
Tru1I	TTAA	9 cut(s)	93, 120, 458, 462, 537, 977, 1560, 1722, 1757
Tru9I	TTAA	9 cut(s)	93, 120, 458, 462, 537, 977, 1560, 1722, 1757
TscAI	CASTG	2 cut(s)	297, 639
TseFI	GTSAC	1 cut(s)	1639
TseI	GCWGC	4 cut(s)	767, 947, 1113, 1298
Tsp45I	GTSAC	1 cut(s)	1639
TspGWI	ACGGA	1 cut(s)	587
TspRI	CASTG	2 cut(s)	297, 639
Tth111I	GACNNNGTC	1 cut(s)	653
VpaK11BI	GGWCC	4 cut(s)	897, 1220, 1259, 1702
XapI	RAATTY	3 cut(s)	89, 845, 967
XceI	RCATGY	1 cut(s)	762
XcmI	CCANNNNNNNNNTGG	1 cut(s)	990
XhoI	CTCGAG	1 cut(s)	819
XmnI	GAANNNNTTC	3 cut(s)	109, 813, 1730
XspI	CTAG	4 cut(s)	237, 626, 872, 1976
ZrmI	AGTACT	1 cut(s)	919
Zsp2I	ATGCAT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.