Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008349

Physical Location & Seq

Genomic Coordinates Forward (+)

49858029 .. 49863699

Gene Structure 5671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009259

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGTGCTGCTTCAGAACCCAAGAGTTGACAGATCTCTAATCTCTTCCAGTATTCATACATTGGTCAGCAAAATGCGTGGTCTTGGAAAGAAATCATCTGTTCAGGAGTCTGGAAAATCTCATTACTCAACTCCTTTGTCAAAGCTATTATCATCAGCAAAATTTAAGAAAGGCGGAAAAGTTTCCCATGTTAAAAAGGTAAAACCAAAATCCAAGACGACTATTGCTTCATCCTTGTTGAAGAGAAGAAGTGCTGACTCGTCAAGGAAGGGAACAAAAAATAATGATACAAGTAAGAAATTGACAACTAGAAAAGGATTACATAAAGCACGTGATGCAGATTATTCAAACAAGTCATCTTCAGTGAAACTTCAGAATGAAAAGTTCTCAAAGGATGGCTCCGATGAGAAAGGGGAAAATGCCGATGGGGAAACCAGAATTAGAAAAAGGAGAAGAAAGAAGAAAAGCAAAAAGAATAAAGTGGATGTAGATGAAACTGCTCGCTTGCAGAGGAGGACAAGGTACCTGTTAATTAAAATAAAATTGGAGCAGAACCTGATTGATGCTTATTCTGGTGAAGGTTGGAAGGGTCAGAGTCGAGAAAAGATTAAGCCAGAAAAAGAACTACAGAGAGCCGAGAATCAGATTTTTAAGTGCAAGCTTGGAATCCGTGATGCTATTCATCAGCTACATTCACTAGGTTCAGTGGGAAGCATTGCAGACTCTGTCATTGATCCAGATGGATCTGTTTATCATGAACATATATTCTGCGCGAAGTGCAAGTTGAACGAAGCTTTCCCCGATAATGATATTGTGCTGTGTGATGGGACATGCAATGCTGCATTCCACCAAAAATGTCTTGATCCTCCCTTGGATACTGAAAATATTCCTCGAGGAGATCAAGGCTGGTTTTGCAAATTTTGTGAGTGTAAAATGGAAATACTAGAAGTAGTCAATGCTCATCTTGGGACCTGCTTTTCCATGGATAGTACTTGGCAGGATGTTTTCAAGGAAGAAGCTGCTTTTCCTGATGGTGGGAATTTATTATTAAATCCAGATGAAGAATGGCCTTCAGATGAGTCTGATGACGATGATTATAATCCAGATAGGAATGTAAACAGTTGTAGCATCAGCAGGGAAGGTAGTGATGAAAATGCATCAGATGACGAATTGTCAACTGACGGCAGCGTAGGTTCTGATGAATCTACCGACGGAGATATTGTTCCTGGCCGCAGACAGAGAAGTAGCGTTGATTATAAGAAGTTATATGATGAAATGTTTGGAAAGGAAGGTCATGTGCTGGAGCAAGTTAGTGATGATGAAGACTGGGGTCCTGGTAAAAGAAAGCGAAGAGAAAAAGAATCTGATGCTGCCAGCACTCTTATGACTCTCTATGAGAGTGAGAGAAATCCAGATGCTGTCCCTACAGAAGTGAAAAGTAAACCTACTACTGATACGCAAGTCAGAAGGTCATGTTTCCGGATTCCTCGCAATGCAGTTGAGAAGCTCCGCCAAGTGTTTTCTGAAAATGAACTTCCTTCTAAAGCTGTCAAGGATAATCTTTCCAAAGAGTTGGGCCTTGATCCTGAGAAGGTTAGTAAATGGTTCAAGAACACACGTTACCTGGCTCTTAAAACCAGAAAGGCAGAGGGAACCAAAAACCTTCATACTTCTGCTTCTGAAATCAACAAGGAATCCAGATATGAAAATGTGACAGGAAGAGCTGTTGATCTCATGGCATCTGATTTTGAGGACACCTCAACTGAAGCTGTGGTCCATTCCCCAAGGAATATTAAGAAGTCCTTCCGGAGAAAGCATCCAAAGTCATTAAGTAGCACTCAGAAGAAAAATCAACAGAAAGGTTCTTCATGTTTGTCCCCCGCAAAGAGCAATAAGGATGGAATGGAATTGAGTGATGATGTGAGCTTGAAGAAGCTTTTGAAAGGAAGAACAAAGGAGAAGCGAGCCAACATTATTGCTGGAAGTGGAGGTGAGTCTCAAGTTGCAGAACTGGAAATGGAGAGACTATGTAAAGCCAAAGGTAGGCTAGAAAAGATGAGACAGAAATTACTAAAGTTTCAAATAGCCAAGGCAAAGAAATCAAAAAAGCCTCCACCTCATGAACAGACTGTCATTTATGTTCCAGTAGCAGAACTAAAAGAAAAGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox PHD

Protein Analysis

724

Amino Acids

81.25

Weight (kDa)

9.31

Isoelectric Point (pI)

38.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	257 - 308	3.7e-10	PHD-finger
Homeodomain	PF00046	496 - 541	2.4e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29940 AT4G29940
fragaria_vesca	FvH4_4g07290 FvH4_4g07290
malus_domestica	MD13G1241800.v1.1 MD16G1248700.v1.1
prunus_persica	Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1 Prupe.1G075500_v2.0.a1
pyrus_communis	pycom13g21370 pycom16g20840
rosa_chinensis	RchiOBHm_Chr4g0399601
rosa_laevigata	RLG00000009259
rosa_multiflora	Rmu_sc0002285.1_g000037
rosa_roxburghii	Rroxscaffold_5G00344520
rosa_rugosa	Rorug04G0017600
rosa_samantha	Rh4AG095500 Rh4BG093000 Rh4CG104000 Rh4DG087900
rosa_wichuraiana	Rw4G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1098, 1257
AbsI	CCTCGAGG	1 cut(s)	891
Acc36I	ACCTGC	1 cut(s)	980
Acc65I	GGTACC	1 cut(s)	522
AccB1I	GGYRCC	1 cut(s)	522
AccII	CGCG	1 cut(s)	773
AccIII	TCCGGA	2 cut(s)	1479, 1806
AciI	CCGC	4 cut(s)	174, 1231, 1510, 1881
AclWI	GGATC	4 cut(s)	728, 751, 857, 1577
AcoI	YGGCCR	1 cut(s)	1228
AcsI	RAATTY	3 cut(s)	161, 917, 1039
AcuI	CTGAAG	4 cut(s)	345, 356, 1056, 1785
AcvI	CACGTG	1 cut(s)	332
AfaI	GTAC	2 cut(s)	524, 991
AfiI	CCNNNNNNNGG	2 cut(s)	1034, 2043
AflIII	ACRYGT	1 cut(s)	1616
AgsI	TTSAA	8 cut(s)	241, 348, 787, 1009, 1609, 1930, 1942, 2081
AhdI	GACNNNNNGTC	1 cut(s)	1171
AjnI	CCWGG	3 cut(s)	1225, 1333, 1623
AloI	GAACNNNNNNTCC	2 cut(s)	1206, 1238
Alw26I	GTCTC	3 cut(s)	2001, 2017, 2053
AlwI	GGATC	4 cut(s)	728, 751, 857, 1577
AlwNI	CAGNNNCTG	3 cut(s)	556, 725, 1418
Ama87I	CYCGRG	1 cut(s)	891
Aor13HI	TCCGGA	2 cut(s)	1479, 1806
AoxI	GGCC	3 cut(s)	1067, 1228, 1576
ApeKI	GCWGC	5 cut(s)	7, 839, 1019, 1185, 1370
ApoI	RAATTY	3 cut(s)	161, 917, 1039
Asp700I	GAANNNNTTC	3 cut(s)	181, 885, 1802
Asp718I	GGTACC	1 cut(s)	522
AspLEI	GCGC	1 cut(s)	773
AspS9I	GGNCC	4 cut(s)	969, 1331, 1576, 1774
AsuHPI	GGTGA	2 cut(s)	587, 2003
AvaI	CYCGRG	1 cut(s)	891
AvaII	GGWCC	3 cut(s)	969, 1331, 1774
BaeI	ACNNNNGTAYC	2 cut(s)	1446, 1479
BanI	GGYRCC	1 cut(s)	522
BbrPI	CACGTG	1 cut(s)	332
BbsI	GAAGAC	1 cut(s)	1329
BbvI	GCAGC	4 cut(s)	826, 1006, 1197, 1357
BccI	CCATC	6 cut(s)	389, 419, 734, 818, 1025, 1892
BceAI	ACGGC	1 cut(s)	1198
BciT130I	CCWGG	3 cut(s)	1227, 1335, 1625
BciVI	GTATCC	1 cut(s)	868
BcoDI	GTCTC	3 cut(s)	2001, 2017, 2053
BfaI	CTAG	4 cut(s)	309, 698, 944, 2048
BfmI	CTRYAG	2 cut(s)	626, 1425
BfuAI	ACCTGC	1 cut(s)	980
BfuI	GTATCC	1 cut(s)	868
BglII	AGATCT	1 cut(s)	32
BisI	GCNGC	6 cut(s)	8, 840, 1020, 1186, 1231, 1371
BlsI	GCNGC	6 cut(s)	9, 841, 1021, 1187, 1232, 1372
BmcAI	AGTACT	1 cut(s)	991
Bme1390I	CCNGG	3 cut(s)	1227, 1335, 1625
Bme18I	GGWCC	3 cut(s)	969, 1331, 1774
BmeRI	GACNNNNNGTC	1 cut(s)	1171
BmeT110I	CYCGRG	1 cut(s)	891
BmgT120I	GGNCC	4 cut(s)	969, 1331, 1576, 1774
BmiI	GGNNCC	5 cut(s)	400, 524, 970, 1332, 1654
BmrFI	CCNGG	3 cut(s)	1227, 1335, 1625
BmrI	ACTGGG	1 cut(s)	1336
BmsI	GCATC	9 cut(s)	325, 553, 664, 1137, 1166, 1357, 1405, 1748, 1825
BmuI	ACTGGG	1 cut(s)	1336
BoxI	GACNNNNGTC	1 cut(s)	1329
BpiI	GAAGAC	1 cut(s)	1329
BplI	GAGNNNNNCTC	2 cut(s)	1742, 1774
BpmI	CTGGAG	1 cut(s)	1322
BpuEI	CTTGAG	1 cut(s)	1983
BsaAI	YACGTR	1 cut(s)	332
BsaBI	GATNNNNATC	1 cut(s)	1098
BsaJI	CCNNGG	4 cut(s)	870, 981, 1784, 2088
BsaWI	WCCGGW	2 cut(s)	1479, 1806
BsaXI	ACNNNNNCTCC	2 cut(s)	1206, 1236
Bsc4I	CCNNNNNNNGG	2 cut(s)	1034, 2043
Bse1I	ACTGG	4 cut(s)	48, 1331, 2016, 2144
Bse3DI	GCAATG	3 cut(s)	714, 841, 1498
Bse8I	GATNNNNATC	1 cut(s)	1098
BseAI	TCCGGA	2 cut(s)	1479, 1806
BseBI	CCWGG	3 cut(s)	1227, 1335, 1625
BseDI	CCNNGG	4 cut(s)	870, 981, 1784, 2088
BseGI	GGATG	6 cut(s)	230, 400, 490, 1006, 1816, 1903
BseJI	GATNNNNATC	1 cut(s)	1098
BseLI	CCNNNNNNNGG	2 cut(s)	1034, 2043
BseMI	GCAATG	3 cut(s)	714, 841, 1498
BseMII	CTCAG	2 cut(s)	1578, 1853
BseNI	ACTGG	4 cut(s)	48, 1331, 2016, 2144
BseRI	GAGGAG	2 cut(s)	526, 909
BseXI	GCAGC	4 cut(s)	826, 1006, 1197, 1357
Bsh1236I	CGCG	1 cut(s)	773
BshFI	GGCC	3 cut(s)	1069, 1230, 1578
BshNI	GGYRCC	1 cut(s)	522
BsiHKCI	CYCGRG	1 cut(s)	891
BsiSI	CCGG	2 cut(s)	1480, 1807
BslFI	GGGAC	4 cut(s)	841, 982, 1406, 1861
BslI	CCNNNNNNNGG	2 cut(s)	1034, 2043
BsmAI	GTCTC	3 cut(s)	2001, 2017, 2053
BsmFI	GGGAC	4 cut(s)	841, 982, 1406, 1861
BsmI	GAATGC	1 cut(s)	842
BsnI	GGCC	3 cut(s)	1069, 1230, 1578
BsoBI	CYCGRG	1 cut(s)	891
Bsp13I	TCCGGA	2 cut(s)	1479, 1806
Bsp143I	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
Bsp19I	CCATGG	1 cut(s)	981
BspACI	CCGC	4 cut(s)	174, 1231, 1510, 1881
BspANI	GGCC	3 cut(s)	1069, 1230, 1578
BspCNI	CTCAG	2 cut(s)	1579, 1852
BspEI	TCCGGA	2 cut(s)	1479, 1806
BspFNI	CGCG	1 cut(s)	773
BspHI	TCATGA	2 cut(s)	754, 2119
BspLI	GGNNCC	5 cut(s)	400, 524, 970, 1332, 1654
BspMI	ACCTGC	1 cut(s)	980
BspPI	GGATC	4 cut(s)	728, 751, 857, 1577
BspQI	GCTCTTC	1 cut(s)	1714
BspT107I	GGYRCC	1 cut(s)	522
BsrDI	GCAATG	3 cut(s)	714, 841, 1498
BsrI	ACTGG	4 cut(s)	48, 1331, 2016, 2144
BssECI	CCNNGG	4 cut(s)	870, 981, 1784, 2088
BssMI	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
BssT1I	CCWWGG	4 cut(s)	870, 981, 1784, 2088
Bst2UI	CCWGG	3 cut(s)	1227, 1335, 1625
Bst4CI	ACNGT	2 cut(s)	1121, 2131
Bst6I	CTCTTC	4 cut(s)	49, 236, 1345, 1714
BstAPI	GCANNNNNTGC	1 cut(s)	335
BstBAI	YACGTR	1 cut(s)	332
BstC8I	GCNNGC	5 cut(s)	502, 506, 659, 1375, 1965
BstDEI	CTNAG	2 cut(s)	1587, 1839
BstDSI	CCRYGG	1 cut(s)	981
BstF5I	GGATG	6 cut(s)	230, 400, 490, 1006, 1816, 1903
BstFNI	CGCG	1 cut(s)	773
BstHHI	GCGC	1 cut(s)	773
BstKTI	GATC	7 cut(s)	35, 736, 746, 865, 901, 1585, 1732
BstMAI	GTCTC	3 cut(s)	2001, 2017, 2053
BstMBI	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
BstMWI	GCNNNNNNNGC	3 cut(s)	335, 777, 912
BstNI	CCWGG	3 cut(s)	1227, 1335, 1625
BstNSI	RCATGY	1 cut(s)	834
BstPAI	GACNNNNGTC	1 cut(s)	1329
BstSCI	CCNGG	3 cut(s)	1225, 1333, 1623
BstSFI	CTRYAG	2 cut(s)	626, 1425
BstUI	CGCG	1 cut(s)	773
BstV1I	GCAGC	4 cut(s)	826, 1006, 1197, 1357
BstV2I	GAAGAC	1 cut(s)	1329
BstX2I	RGATCY	2 cut(s)	32, 743
BstXI	CCANNNNNNTGG	1 cut(s)	1573
BstYI	RGATCY	2 cut(s)	32, 743
BsuI	GTATCC	1 cut(s)	868
BsuRI	GGCC	3 cut(s)	1069, 1230, 1578
BtgI	CCRYGG	1 cut(s)	981
BtsCI	GGATG	6 cut(s)	230, 400, 490, 1006, 1816, 1903
BtsIMutI	CAGTG	2 cut(s)	369, 711
BveI	ACCTGC	1 cut(s)	980
Cac8I	GCNNGC	5 cut(s)	502, 506, 659, 1375, 1965
CaiI	CAGNNNCTG	3 cut(s)	556, 725, 1418
CciI	TCATGA	2 cut(s)	754, 2119
CfoI	GCGC	1 cut(s)	773
Cfr13I	GGNCC	4 cut(s)	969, 1331, 1576, 1774
Csp6I	GTAC	2 cut(s)	523, 990
CspCI	CAANNNNNGTGG	2 cut(s)	58, 93
CviAII	CATG	9 cut(s)	188, 755, 831, 982, 1295, 1473, 1735, 1869, 2120
CviQI	GTAC	2 cut(s)	523, 990
DdeI	CTNAG	2 cut(s)	1587, 1839
DpnI	GATC	7 cut(s)	34, 735, 745, 864, 900, 1584, 1731
DpnII	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
DriI	GACNNNNNGTC	1 cut(s)	1171
EaeI	YGGCCR	1 cut(s)	1228
Eam1104I	CTCTTC	4 cut(s)	49, 236, 1345, 1714
Eam1105I	GACNNNNNGTC	1 cut(s)	1171
EarI	CTCTTC	4 cut(s)	49, 236, 1345, 1714
EciI	GGCGGA	2 cut(s)	189, 1499
Eco130I	CCWWGG	4 cut(s)	870, 981, 1784, 2088
Eco47I	GGWCC	3 cut(s)	969, 1331, 1774
Eco57I	CTGAAG	4 cut(s)	345, 356, 1056, 1785
Eco72I	CACGTG	1 cut(s)	332
Eco88I	CYCGRG	1 cut(s)	891
EcoO109I	RGGNCCY	2 cut(s)	969, 1331
EcoRII	CCWGG	3 cut(s)	1225, 1333, 1623
EcoT14I	CCWWGG	4 cut(s)	870, 981, 1784, 2088
EcoT22I	ATGCAT	1 cut(s)	1159
ErhI	CCWWGG	4 cut(s)	870, 981, 1784, 2088
FaeI	CATG	9 cut(s)	191, 758, 834, 985, 1298, 1476, 1738, 1872, 2123
FalI	AAGNNNNNCTT	2 cut(s)	1787, 1819
FaqI	GGGAC	4 cut(s)	841, 982, 1406, 1861
FatI	CATG	9 cut(s)	187, 754, 830, 981, 1294, 1472, 1734, 1868, 2119
FauI	CCCGC	1 cut(s)	1888
Fnu4HI	GCNGC	6 cut(s)	8, 840, 1020, 1186, 1231, 1371
FokI	GGATG	6 cut(s)	217, 407, 497, 1013, 1803, 1910
Fsp4HI	GCNGC	6 cut(s)	8, 840, 1020, 1186, 1231, 1371
FspBI	CTAG	4 cut(s)	309, 698, 944, 2048
GlaI	GCGC	1 cut(s)	772
GluI	GCNGC	6 cut(s)	8, 840, 1020, 1186, 1231, 1371
GsuI	CTGGAG	1 cut(s)	1322
HaeIII	GGCC	3 cut(s)	1069, 1230, 1578
HapII	CCGG	2 cut(s)	1480, 1807
HhaI	GCGC	1 cut(s)	773
Hin1II	CATG	9 cut(s)	191, 758, 834, 985, 1298, 1476, 1738, 1872, 2123
Hin6I	GCGC	1 cut(s)	771
HinP1I	GCGC	1 cut(s)	771
HincII	GTYRAC	2 cut(s)	28, 1176
HindII	GTYRAC	2 cut(s)	28, 1176
HindIII	AAGCTT	3 cut(s)	659, 792, 1934
HpaII	CCGG	2 cut(s)	1480, 1807
HphI	GGTGA	2 cut(s)	587, 2003
Hpy166II	GTNNAC	4 cut(s)	28, 1117, 1176, 1442
Hpy8I	GTNNAC	4 cut(s)	28, 1117, 1176, 1442
Hpy99I	CGWCG	1 cut(s)	1214
HpyCH4III	ACNGT	2 cut(s)	1121, 2131
HpyCH4IV	ACGT	2 cut(s)	331, 1618
HpyF10VI	GCNNNNNNNGC	3 cut(s)	335, 777, 912
HpyF3I	CTNAG	2 cut(s)	1587, 1839
HpySE526I	ACGT	2 cut(s)	331, 1618
Hsp92II	CATG	9 cut(s)	191, 758, 834, 985, 1298, 1476, 1738, 1872, 2123
HspAI	GCGC	1 cut(s)	771
Kpn2I	TCCGGA	2 cut(s)	1479, 1806
KpnI	GGTACC	1 cut(s)	526
Kzo9I	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
LguI	GCTCTTC	1 cut(s)	1714
LmnI	GCTCC	4 cut(s)	404, 547, 1303, 1512
Lsp1109I	GCAGC	4 cut(s)	826, 1006, 1197, 1357
LweI	GCATC	9 cut(s)	325, 553, 664, 1137, 1166, 1357, 1405, 1748, 1825
MaeI	CTAG	4 cut(s)	309, 698, 944, 2048
MaeII	ACGT	2 cut(s)	331, 1618
MaeIII	GTNAC	2 cut(s)	1619, 1711
MalI	GATC	7 cut(s)	34, 735, 745, 864, 900, 1584, 1731
MboI	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
MflI	RGATCY	2 cut(s)	32, 743
MlyI	GAGTC	7 cut(s)	116, 251, 604, 716, 1088, 1381, 2003
MmeI	TCCRAC	1 cut(s)	563
Mph1103I	ATGCAT	1 cut(s)	1159
MroI	TCCGGA	2 cut(s)	1479, 1806
MroXI	GAANNNNTTC	3 cut(s)	181, 885, 1802
MslI	CAYNNNNRTG	1 cut(s)	1382
MspI	CCGG	2 cut(s)	1480, 1807
MspR9I	CCNGG	3 cut(s)	1227, 1335, 1625
Mva1269I	GAATGC	1 cut(s)	842
MvaI	CCWGG	3 cut(s)	1227, 1335, 1625
MvnI	CGCG	1 cut(s)	773
MwoI	GCNNNNNNNGC	3 cut(s)	335, 777, 912
NcoI	CCATGG	1 cut(s)	981
NdeII	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
NlaIII	CATG	9 cut(s)	191, 758, 834, 985, 1298, 1476, 1738, 1872, 2123
NlaIV	GGNNCC	5 cut(s)	400, 524, 970, 1332, 1654
NmeAIII	GCCGAG	1 cut(s)	661
NmuCI	GTSAC	1 cut(s)	1711
NsiI	ATGCAT	1 cut(s)	1159
NspI	RCATGY	1 cut(s)	834
PacI	TTAATTAA	1 cut(s)	534
PaeR7I	CTCGAG	1 cut(s)	891
PagI	TCATGA	2 cut(s)	754, 2119
PciSI	GCTCTTC	1 cut(s)	1714
PctI	GAATGC	1 cut(s)	842
PdmI	GAANNNNTTC	3 cut(s)	181, 885, 1802
PfeI	GAWTC	6 cut(s)	640, 666, 1202, 1361, 1483, 1694
PflFI	GACNNNGTC	1 cut(s)	725
PkrI	GCNGC	6 cut(s)	9, 841, 1021, 1187, 1232, 1372
PleI	GAGTC	7 cut(s)	115, 251, 603, 716, 1087, 1381, 2002
PmaCI	CACGTG	1 cut(s)	332
PmlI	CACGTG	1 cut(s)	332
PpsI	GAGTC	7 cut(s)	115, 251, 603, 716, 1087, 1381, 2002
Ppu21I	YACGTR	1 cut(s)	332
PpuMI	RGGWCCY	2 cut(s)	969, 1331
PshAI	GACNNNNGTC	1 cut(s)	1329
PsiI	TTATAA	2 cut(s)	1098, 1257
Psp5II	RGGWCCY	2 cut(s)	969, 1331
Psp6I	CCWGG	3 cut(s)	1225, 1333, 1623
PspCI	CACGTG	1 cut(s)	332
PspGI	CCWGG	3 cut(s)	1225, 1333, 1623
PspN4I	GGNNCC	5 cut(s)	400, 524, 970, 1332, 1654
PspPI	GGNCC	4 cut(s)	969, 1331, 1576, 1774
PspPPI	RGGWCCY	2 cut(s)	969, 1331
PspXI	VCTCGAGB	1 cut(s)	891
PsrI	GAACNNNNNNTAC	2 cut(s)	1604, 1636
PstNI	CAGNNNCTG	3 cut(s)	556, 725, 1418
PsuI	RGATCY	2 cut(s)	32, 743
PsyI	GACNNNGTC	1 cut(s)	725
RsaI	GTAC	2 cut(s)	524, 991
RsaNI	GTAC	2 cut(s)	523, 990
RseI	CAYNNNNRTG	1 cut(s)	1382
SapI	GCTCTTC	1 cut(s)	1714
SatI	GCNGC	6 cut(s)	8, 840, 1020, 1186, 1231, 1371
Sau3AI	GATC	7 cut(s)	32, 733, 743, 862, 898, 1582, 1729
Sau96I	GGNCC	4 cut(s)	969, 1331, 1576, 1774
ScaI	AGTACT	1 cut(s)	991
SchI	GAGTC	7 cut(s)	116, 251, 604, 716, 1088, 1381, 2003
ScrFI	CCNGG	3 cut(s)	1227, 1335, 1625
SfaNI	GCATC	9 cut(s)	325, 553, 664, 1137, 1166, 1357, 1405, 1748, 1825
SfcI	CTRYAG	2 cut(s)	626, 1425
Sfr274I	CTCGAG	1 cut(s)	891
SinI	GGWCC	3 cut(s)	969, 1331, 1774
SlaI	CTCGAG	1 cut(s)	891
SmiMI	CAYNNNNRTG	1 cut(s)	1382
SmlI	CTYRAG	2 cut(s)	891, 1998
SmoI	CTYRAG	2 cut(s)	891, 1998
SsiI	CCGC	4 cut(s)	174, 1231, 1510, 1881
SspI	AATATT	2 cut(s)	886, 1792
SspMI	CTAG	4 cut(s)	309, 698, 944, 2048
StyD4I	CCNGG	3 cut(s)	1225, 1333, 1623
StyI	CCWWGG	4 cut(s)	870, 981, 1784, 2088
TaaI	ACNGT	2 cut(s)	1121, 2131
TaiI	ACGT	2 cut(s)	334, 1621
TaqI	TCGA	2 cut(s)	598, 892
TatI	WGTACW	1 cut(s)	989
TauI	GCSGC	1 cut(s)	1233
TfiI	GAWTC	6 cut(s)	640, 666, 1202, 1361, 1483, 1694
TscAI	CASTG	2 cut(s)	369, 711
TseFI	GTSAC	1 cut(s)	1711
TseI	GCWGC	5 cut(s)	7, 839, 1019, 1185, 1370
Tsp45I	GTSAC	1 cut(s)	1711
TspGWI	ACGGA	2 cut(s)	659, 1227
TspRI	CASTG	2 cut(s)	369, 711
Tth111I	GACNNNGTC	1 cut(s)	725
VpaK11BI	GGWCC	3 cut(s)	969, 1331, 1774
XapI	RAATTY	3 cut(s)	161, 917, 1039
XceI	RCATGY	1 cut(s)	834
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1062
XhoI	CTCGAG	1 cut(s)	891
XmnI	GAANNNNTTC	3 cut(s)	181, 885, 1802
XspI	CTAG	4 cut(s)	309, 698, 944, 2048
ZrmI	AGTACT	1 cut(s)	991
Zsp2I	ATGCAT	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.