pycom16g23150

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0006349
Physical Location & Seq
Reverse (-)
23750789 .. 23753178
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 792 bp
ATGGCGCTTCTCTCTTCCCCTCATCCTCTCCTAGCCCAATTCTCTGTTTCCACCGACTCTCTACTCGTCCGCCGCCGCCCTACCACCGCCTGCCAAGTATGTACCCCCAAGGAAGCCGTACACCGGGTCGACCCGTCCGCGCTCACTCTTGCCGAGAGTTTGTCGGAGAACGAGCTATGGGCCGCCGCTTGTCTCCGCGTTCGCTCCTTCTACCAGTTCAAACCCTCCACGTTCGGCCTCCAAGATCACAGAAGGTACTTGGCGGAACGGGAGTTTGAAGCGATGAAGGAACGTGTTGGTGGAAAGAGGAAGGGTTTCAGAAGAGTTTCGTGCATAAATGCTTCAGTCCCTTTGTCACAAATTTCTAGCCTTTCTGTTTCAGATGAATTTTGTGCTGAATGTAAGTTTAACAAGGATGGAGAAGATCGAGTGGTGGTTGGGACTCTTGATCTTAACCAGTGTGTGAGTCTTCCAGATGAGATTACAGGAATCAAGCCAGAGGGGATTGGAGCTGATTTTGCAAGGGCATACCTGAGTAATGTATGTGTTGCTAAAGAACTGCATAGAAATGGGCTAGGTTATGCTCTTGTTTCAAAATCAAAGTTAGTTGCGCAAGAATGGGGCATAAGTGATCTTTATGTTCATGTTGCTGTTGATAATGAACCTGCAAAAAAGTTGTACATGAAGAGTGGTTTTGTTTATGAAAATGACGAGCCTGCATGGCAGGCGAGGTTCCTAGACCGGCCACGAAGGATACTGTTGTGGTTTGGCATCCCAGGGCTGCAACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

264

Amino Acids

29.43

Weight (kDa)

8.38

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 144 - 232 2.3e-09 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 612
Acc36I ACCTGC 1 cut(s) 673
AccI GTMKAC 1 cut(s) 129
AccII CGCG 2 cut(s) 140, 198
AciI CCGC 9 cut(s) 70, 73, 76, 87, 138, 183, 186, 196, 263
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 2 cut(s) 360, 386
AcuI CTGAAG 1 cut(s) 327
AfaI GTAC 4 cut(s) 103, 120, 257, 680
AfiI CCNNNNNNNGG 1 cut(s) 123
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 3 cut(s) 220, 278, 594
AjnI CCWGG 1 cut(s) 775
AluBI AGCT 2 cut(s) 175, 512
AluI AGCT 2 cut(s) 175, 512
Alw26I GTCTC 1 cut(s) 197
AoxI GGCC 3 cut(s) 180, 235, 743
ApeKI GCWGC 1 cut(s) 781
ApoI RAATTY 2 cut(s) 360, 386
Asp700I GAANNNNTTC 2 cut(s) 314, 325
AspLEI GCGC 3 cut(s) 7, 142, 613
AspS9I GGNCC 1 cut(s) 180
AsuC2I CCSGG 1 cut(s) 125
BaeI ACNNNNGTAYC 2 cut(s) 746, 779
BbsI GAAGAC 1 cut(s) 461
BbvI GCAGC 1 cut(s) 768
BccI CCATC 1 cut(s) 410
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 777
BciVI GTATCC 1 cut(s) 747
BcnI CCSGG 1 cut(s) 125
BcoDI GTCTC 1 cut(s) 197
BfaI CTAG 4 cut(s) 32, 366, 575, 737
BfoI RGCGCY 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 673
BfuI GTATCC 1 cut(s) 747
BglI GCCNNNNNGGC 1 cut(s) 721
BisI GCNGC 5 cut(s) 73, 76, 183, 186, 782
BlsI GCNGC 5 cut(s) 74, 77, 184, 187, 783
Bme1390I CCNGG 2 cut(s) 125, 777
BmgT120I GGNCC 1 cut(s) 180
BmiI GGNNCC 1 cut(s) 734
BmrFI CCNGG 2 cut(s) 125, 777
BmsI GCATC 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 461
BpuMI CCSGG 1 cut(s) 125
BsaJI CCNNGG 3 cut(s) 108, 775, 776
Bsc4I CCNNNNNNNGG 1 cut(s) 123
Bse118I RCCGGY 1 cut(s) 741
Bse1I ACTGG 2 cut(s) 214, 457
BseBI CCWGG 1 cut(s) 777
BseDI CCNNGG 3 cut(s) 108, 775, 776
BseGI GGATG 3 cut(s) 22, 421, 771
BseLI CCNNNNNNNGG 1 cut(s) 123
BseMII CTCAG 1 cut(s) 524
BseNI ACTGG 2 cut(s) 214, 457
BseXI GCAGC 1 cut(s) 768
Bsh1236I CGCG 2 cut(s) 140, 198
BshFI GGCC 3 cut(s) 182, 237, 745
BsiSI CCGG 2 cut(s) 124, 742
BslFI GGGAC 2 cut(s) 332, 454
BslI CCNNNNNNNGG 1 cut(s) 123
BsmAI GTCTC 1 cut(s) 197
BsmFI GGGAC 2 cut(s) 332, 454
BsnI GGCC 3 cut(s) 182, 237, 745
Bsp1407I TGTACA 1 cut(s) 678
Bsp143I GATC 4 cut(s) 244, 424, 448, 631
BspACI CCGC 9 cut(s) 70, 73, 76, 87, 138, 183, 186, 196, 263
BspANI GGCC 3 cut(s) 182, 237, 745
BspCNI CTCAG 1 cut(s) 525
BspFNI CGCG 2 cut(s) 140, 198
BspLI GGNNCC 1 cut(s) 734
BspMI ACCTGC 1 cut(s) 673
BsrFI RCCGGY 1 cut(s) 741
BsrGI TGTACA 1 cut(s) 678
BsrI ACTGG 2 cut(s) 214, 457
BssAI RCCGGY 1 cut(s) 741
BssECI CCNNGG 3 cut(s) 108, 775, 776
BssMI GATC 4 cut(s) 244, 424, 448, 631
BssT1I CCWWGG 1 cut(s) 108
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 1 cut(s) 759
Bst6I CTCTTC 3 cut(s) 19, 316, 680
BstAUI TGTACA 1 cut(s) 678
BstC8I GCNNGC 3 cut(s) 91, 717, 726
BstDEI CTNAG 1 cut(s) 533
BstF5I GGATG 3 cut(s) 22, 421, 771
BstFNI CGCG 2 cut(s) 140, 198
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 142, 613
BstKTI GATC 4 cut(s) 247, 427, 451, 634
BstMAI GTCTC 1 cut(s) 197
BstMBI GATC 4 cut(s) 244, 424, 448, 631
BstMWI GCNNNNNNNGC 3 cut(s) 518, 721, 725
BstNI CCWGG 1 cut(s) 777
BstSCI CCNGG 2 cut(s) 123, 775
BstUI CGCG 2 cut(s) 140, 198
BstV1I GCAGC 1 cut(s) 768
BstV2I GAAGAC 1 cut(s) 461
BsuI GTATCC 1 cut(s) 747
BsuRI GGCC 3 cut(s) 182, 237, 745
BtgZI GCGATG 1 cut(s) 296
BtsCI GGATG 3 cut(s) 22, 421, 771
BtsIMutI CAGTG 1 cut(s) 464
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 3 cut(s) 91, 717, 726
CfoI GCGC 3 cut(s) 7, 142, 613
Cfr10I RCCGGY 1 cut(s) 741
Cfr13I GGNCC 1 cut(s) 180
Csp6I GTAC 4 cut(s) 102, 119, 256, 679
CviAII CATG 3 cut(s) 644, 682, 720
CviQI GTAC 4 cut(s) 102, 119, 256, 679
DdeI CTNAG 1 cut(s) 533
DpnI GATC 4 cut(s) 246, 426, 450, 633
DpnII GATC 4 cut(s) 244, 424, 448, 631
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 3 cut(s) 19, 316, 680
EarI CTCTTC 3 cut(s) 19, 316, 680
EciI GGCGGA 2 cut(s) 59, 278
Eco130I CCWWGG 1 cut(s) 108
Eco57I CTGAAG 1 cut(s) 327
EcoRII CCWGG 1 cut(s) 775
EcoT14I CCWWGG 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 3 cut(s) 647, 685, 723
FaqI GGGAC 2 cut(s) 332, 454
FatI CATG 3 cut(s) 643, 681, 719
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 5 cut(s) 73, 76, 183, 186, 782
FokI GGATG 3 cut(s) 9, 428, 758
Fsp4HI GCNGC 5 cut(s) 73, 76, 183, 186, 782
FspBI CTAG 4 cut(s) 32, 366, 575, 737
FspI TGCGCA 1 cut(s) 612
GlaI GCGC 3 cut(s) 6, 141, 612
GluI GCNGC 5 cut(s) 73, 76, 183, 186, 782
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 182, 237, 745
HapII CCGG 2 cut(s) 124, 742
HhaI GCGC 3 cut(s) 7, 142, 613
Hin1II CATG 3 cut(s) 647, 685, 723
Hin6I GCGC 3 cut(s) 5, 140, 611
HinP1I GCGC 3 cut(s) 5, 140, 611
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 4 cut(s) 56, 442, 466, 489
HpaII CCGG 2 cut(s) 124, 742
Hpy166II GTNNAC 2 cut(s) 121, 130
Hpy188I TCNGA 3 cut(s) 166, 320, 382
Hpy188III TCNNGA 2 cut(s) 446, 473
Hpy8I GTNNAC 2 cut(s) 121, 130
HpyAV CCTTC 5 cut(s) 217, 246, 280, 304, 744
HpyCH4III ACNGT 1 cut(s) 759
HpyCH4IV ACGT 2 cut(s) 230, 292
HpyCH4V TGCA 6 cut(s) 333, 521, 562, 668, 719, 784
HpyF10VI GCNNNNNNNGC 3 cut(s) 518, 721, 725
HpyF3I CTNAG 1 cut(s) 533
HpySE526I ACGT 2 cut(s) 230, 292
Hsp92II CATG 3 cut(s) 647, 685, 723
HspAI GCGC 3 cut(s) 5, 140, 611
Kzo9I GATC 4 cut(s) 244, 424, 448, 631
LmnI GCTCC 2 cut(s) 209, 509
Lsp1109I GCAGC 1 cut(s) 768
LweI GCATC 1 cut(s) 780
MaeI CTAG 4 cut(s) 32, 366, 575, 737
MaeII ACGT 2 cut(s) 230, 292
MaeIII GTNAC 1 cut(s) 354
MalI GATC 4 cut(s) 246, 426, 450, 633
MboI GATC 4 cut(s) 244, 424, 448, 631
MboII GAAGA 5 cut(s) 6, 333, 434, 461, 697
MluCI AATT 3 cut(s) 38, 360, 386
MlyI GAGTC 3 cut(s) 50, 436, 475
MmeI TCCRAC 1 cut(s) 144
MnlI CCTC 7 cut(s) 30, 36, 235, 248, 300, 493, 723
MroXI GAANNNNTTC 2 cut(s) 314, 325
MseI TTAA 2 cut(s) 408, 453
MslI CAYNNNNRTG 1 cut(s) 567
MspI CCGG 2 cut(s) 124, 742
MspR9I CCNGG 2 cut(s) 125, 777
MvaI CCWGG 1 cut(s) 777
MvnI CGCG 2 cut(s) 140, 198
MwoI GCNNNNNNNGC 3 cut(s) 518, 721, 725
NciI CCSGG 1 cut(s) 125
NdeII GATC 4 cut(s) 244, 424, 448, 631
NlaIII CATG 3 cut(s) 647, 685, 723
NlaIV GGNNCC 1 cut(s) 734
NmeAIII GCCGAG 1 cut(s) 178
NmuCI GTSAC 1 cut(s) 354
NsbI TGCGCA 1 cut(s) 612
PasI CCCWGGG 1 cut(s) 776
PdmI GAANNNNTTC 2 cut(s) 314, 325
PfeI GAWTC 1 cut(s) 489
PkrI GCNGC 5 cut(s) 74, 77, 184, 187, 783
PleI GAGTC 3 cut(s) 50, 436, 474
PpsI GAGTC 3 cut(s) 50, 436, 474
Psp6I CCWGG 1 cut(s) 775
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 1 cut(s) 734
PspPI GGNCC 1 cut(s) 180
RsaI GTAC 4 cut(s) 103, 120, 257, 680
RsaNI GTAC 4 cut(s) 102, 119, 256, 679
RseI CAYNNNNRTG 1 cut(s) 567
SalI GTCGAC 1 cut(s) 128
SaqAI TTAA 2 cut(s) 408, 453
SatI GCNGC 5 cut(s) 73, 76, 183, 186, 782
Sau3AI GATC 4 cut(s) 244, 424, 448, 631
Sau96I GGNCC 1 cut(s) 180
SchI GAGTC 3 cut(s) 50, 436, 475
ScrFI CCNGG 2 cut(s) 125, 777
SetI ASST 9 cut(s) 177, 233, 257, 295, 514, 534, 580, 667, 734
SfaNI GCATC 1 cut(s) 780
SmiMI CAYNNNNRTG 1 cut(s) 567
Sse9I AATT 3 cut(s) 38, 360, 386
SsiI CCGC 9 cut(s) 70, 73, 76, 87, 138, 183, 186, 196, 263
SspMI CTAG 4 cut(s) 32, 366, 575, 737
StyD4I CCNGG 2 cut(s) 123, 775
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 1 cut(s) 759
TaiI ACGT 2 cut(s) 233, 295
TaqI TCGA 2 cut(s) 129, 427
TasI AATT 3 cut(s) 38, 360, 386
TatI WGTACW 1 cut(s) 678
TauI GCSGC 4 cut(s) 75, 78, 185, 188
TfiI GAWTC 1 cut(s) 489
Tru1I TTAA 2 cut(s) 408, 453
Tru9I TTAA 2 cut(s) 408, 453
TscAI CASTG 1 cut(s) 464
TseFI GTSAC 1 cut(s) 354
TseI GCWGC 1 cut(s) 781
Tsp45I GTSAC 1 cut(s) 354
TspDTI ATGAA 6 cut(s) 299, 399, 632, 675, 698, 717
TspRI CASTG 1 cut(s) 464
XapI RAATTY 2 cut(s) 360, 386
XmiI GTMKAC 1 cut(s) 129
XmnI GAANNNNTTC 2 cut(s) 314, 325
XspI CTAG 4 cut(s) 32, 366, 575, 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.