pycom17g01220
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
847055 .. 849857
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1452 bp
ATGGAAGCTTTCTGCGCCATCCGCTTCGCCCACTTCGTAGCTCCACTGAAAGTATCGTTCATCAGCACCAGGACCAGACTTGCTTTCCCTCAGAAAGTCTTCTTCTGTCAAGCGAGGTTTGATGGCTCGTTTAGCTTAAAATTGGTATCTCCAGCTCTATTGGCAGCTGAAAAAGAAGAAGCTAGGGCTGTCCTAACCTTGTTCCTAAAGAAACAAGGGCTTAGCCCTACAGTTGCTGCAAGAACCATAAACAAGTCAGAGCATTTCGTTGACCACCTGGTCGATAGACTTCATTCTGTGCATAAATCCCGGTATCTAGTAGGACGAGAGCTAACAACTCTTGAGATTAGGGAGGCCCTAATCCCTTACCTTGAAGCCCTTCTTGAGGAGCATGGAATGTTTTTGGTAGATGTGGTGGAAAGCTTTCCAGATGAACCTGTAAAAGAAAAGCCCATTGTACCAGTTACTAAATCTCAACCGCCTGTGGATTTGAACTTGAAGAAGCTAAAGGCCATTTCTCGAGTAAGTGAGATAGGCACAGCTGGGACACTCCCACCTCACATTGTCTACCTTTTAGAGCTTGGCATGGATCTTGATCAAATCAAGGGAATTGCACGCAGATTTCCATCTTTTGCGTATTACAGTTTGGAGGGGAAAATAAAACCGATTGTTGAGTTTCTTCTCGAACTTGGGGTCCCAAAATCTGATATCCCATCGATCCTTAACAAGAGGCCACAGTTGTGTGGAATCAGTCTATCCGAGAATATTATACCTACCATGAGTTTCTTAGAAGGCCTGGGTGTAGACAAGAAACAATGGGCAAAAGTTATTTACCGCTTTCCAGCGCTTCTCACTTACAGTAGGCAGAAGGTGAAGACAACTATAGATTTCCTATATGAAATGGGACTTTCAGCTGAGATGATAGGTAAGGTTTTGACGCGCTGTCCGAATATTATAAGTTACAGTGTAGAGGACAAGTTACGGCCAACAGCTCAGTACATTGTCTCATTGGGGGTGGATGTTGGTGTTCTGCTCCATCGATCTCCCACGGTTTTTGGTCTTAGTATTGAGGCCAACTTGAAGCCTGTAACACAATTTTTCGTTGAGAGGGGATACAGTATGGATGAAATTGGGATCATGCTTTCAAGATACGGAGCTTTGTATACTTTCAGCTTGGCAGAGAATCTGGTACCGAAATGGGAGTTCTTTTTGACCATGGATTATTCGAAATCAGAGCTGGTTAAATTTCCTCAGTATTTCGGTTACAGTTTGGGAGACAGGATCAAACCAAGATATGCACTAATGAAGGACTGTGGAGTGATGCTGCTGCTGAACCAATTGTTATCACTGTCAGGTAGTAACTTTGATAAGGCTCTTGCAAAGAAGATAAAGAAATTGAATGCCGGGAAAGATCCAAATACAAGCAGCGATGAATCGGAGGTTGAAGAATGA

Protein Analysis

484

Amino Acids

54.33

Weight (kDa)

8.88

Isoelectric Point (pI)

29.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 50 - 300 6.6e-22 mTERF
mTERF PF02536 290 - 455 1.4e-27 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012380)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 956
AasI GACNNNNNNGTC 1 cut(s) 278
Acc65I GGTACC 1 cut(s) 1189
AccB1I GGYRCC 1 cut(s) 1189
AccI GTMKAC 3 cut(s) 567, 804, 1163
AccII CGCG 1 cut(s) 940
AciI CCGC 3 cut(s) 22, 479, 835
AclWI GGATC 5 cut(s) 597, 712, 1142, 1289, 1406
AcoI YGGCCR 1 cut(s) 983
AcsI RAATTY 1 cut(s) 1244
AfaI GTAC 3 cut(s) 459, 998, 1191
AfeI AGCGCT 1 cut(s) 846
AfiI CCNNNNNNNGG 1 cut(s) 385
AgsI TTSAA 7 cut(s) 374, 493, 499, 1081, 1146, 1399, 1445
AhdI GACNNNNNGTC 1 cut(s) 942
AjnI CCWGG 3 cut(s) 68, 276, 795
AleI CACNNNNGTG 1 cut(s) 739
AloI GAACNNNNNNTCC 2 cut(s) 678, 710
Alw26I GTCTC 2 cut(s) 1009, 1269
AlwI GGATC 5 cut(s) 597, 712, 1142, 1289, 1406
AlwNI CAGNNNCTG 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 519
Aor51HI AGCGCT 1 cut(s) 846
AoxI GGCC 6 cut(s) 354, 510, 731, 793, 983, 1071
ApeKI GCWGC 5 cut(s) 164, 236, 1324, 1327, 1425
ApoI RAATTY 1 cut(s) 1244
ArsI GACNNNNNNTTYG 2 cut(s) 678, 710
Asp700I GAANNNNTTC 3 cut(s) 98, 378, 423
Asp718I GGTACC 1 cut(s) 1189
AspLEI GCGC 3 cut(s) 17, 847, 942
AspS9I GGNCC 3 cut(s) 72, 355, 694
AsuC2I CCSGG 2 cut(s) 310, 1405
AsuHPI GGTGA 1 cut(s) 883
AsuII TTCGAA 1 cut(s) 1226
AvaI CYCGRG 1 cut(s) 519
AvaII GGWCC 2 cut(s) 72, 694
BanI GGYRCC 1 cut(s) 1189
BbsI GAAGAC 2 cut(s) 91, 881
BbvI GCAGC 5 cut(s) 176, 223, 1311, 1314, 1437
BccI CCATC 5 cut(s) 26, 116, 634, 721, 1044
BceAI ACGGC 1 cut(s) 998
BciT130I CCWGG 3 cut(s) 70, 278, 797
BciVI GTATCC 1 cut(s) 1106
BclI TGATCA 1 cut(s) 595
BcnI CCSGG 2 cut(s) 310, 1405
BcoDI GTCTC 2 cut(s) 1009, 1269
BfaI CTAG 2 cut(s) 183, 317
BfmI CTRYAG 2 cut(s) 228, 882
BfoI RGCGCY 1 cut(s) 848
BfuI GTATCC 1 cut(s) 1106
BisI GCNGC 5 cut(s) 165, 237, 1325, 1328, 1426
BlpI GCTNAGC 1 cut(s) 221
BlsI GCNGC 5 cut(s) 166, 238, 1326, 1329, 1427
Bme1390I CCNGG 5 cut(s) 70, 278, 310, 797, 1405
Bme18I GGWCC 2 cut(s) 72, 694
BmeRI GACNNNNNGTC 1 cut(s) 942
BmeT110I CYCGRG 1 cut(s) 519
BmgT120I GGNCC 3 cut(s) 72, 355, 694
BmiI GGNNCC 3 cut(s) 695, 696, 1191
BmrFI CCNGG 5 cut(s) 70, 278, 310, 797, 1405
BmsI GCATC 1 cut(s) 1311
BpiI GAAGAC 2 cut(s) 91, 881
BpmI CTGGAG 1 cut(s) 135
Bpu1102I GCTNAGC 1 cut(s) 221
Bpu14I TTCGAA 1 cut(s) 1226
BpuEI CTTGAG 2 cut(s) 362, 404
BpuMI CCSGG 2 cut(s) 310, 1405
Bsa29I ATCGAT 2 cut(s) 716, 1039
BsaBI GATNNNNATC 2 cut(s) 594, 625
BsaJI CCNNGG 3 cut(s) 796, 1047, 1215
Bsc4I CCNNNNNNNGG 1 cut(s) 385
Bse1I ACTGG 1 cut(s) 461
Bse8I GATNNNNATC 2 cut(s) 594, 625
BseBI CCWGG 3 cut(s) 70, 278, 797
BseCI ATCGAT 2 cut(s) 716, 1039
BseDI CCNNGG 3 cut(s) 796, 1047, 1215
BseGI GGATG 3 cut(s) 18, 1024, 1129
BseJI GATNNNNATC 2 cut(s) 594, 625
BseLI CCNNNNNNNGG 1 cut(s) 385
BseMII CTCAG 4 cut(s) 104, 906, 1007, 1265
BseNI ACTGG 1 cut(s) 461
BseRI GAGGAG 1 cut(s) 401
BseXI GCAGC 5 cut(s) 176, 223, 1311, 1314, 1437
BseYI CCCAGC 1 cut(s) 542
Bsh1236I CGCG 1 cut(s) 940
BshFI GGCC 6 cut(s) 356, 512, 733, 795, 985, 1073
BshNI GGYRCC 1 cut(s) 1189
BshVI ATCGAT 2 cut(s) 716, 1039
BsiHKCI CYCGRG 1 cut(s) 519
BsiSI CCGG 2 cut(s) 310, 1404
BslFI GGGAC 3 cut(s) 559, 680, 918
BslI CCNNNNNNNGG 1 cut(s) 385
BsmAI GTCTC 2 cut(s) 1009, 1269
BsmFI GGGAC 3 cut(s) 559, 680, 918
BsmI GAATGC 1 cut(s) 1405
BsnI GGCC 6 cut(s) 356, 512, 733, 795, 985, 1073
BsoBI CYCGRG 1 cut(s) 519
Bsp119I TTCGAA 1 cut(s) 1226
Bsp143I GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
Bsp1720I GCTNAGC 1 cut(s) 221
Bsp19I CCATGG 1 cut(s) 1215
BspACI CCGC 3 cut(s) 22, 479, 835
BspANI GGCC 6 cut(s) 356, 512, 733, 795, 985, 1073
BspCNI CTCAG 4 cut(s) 103, 907, 1006, 1264
BspDI ATCGAT 2 cut(s) 716, 1039
BspFNI CGCG 1 cut(s) 940
BspLI GGNNCC 3 cut(s) 695, 696, 1191
BspPI GGATC 5 cut(s) 597, 712, 1142, 1289, 1406
BspT104I TTCGAA 1 cut(s) 1226
BspT107I GGYRCC 1 cut(s) 1189
BsrI ACTGG 1 cut(s) 461
BssECI CCNNGG 3 cut(s) 796, 1047, 1215
BssMI GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
BssNAI GTATAC 1 cut(s) 1164
BssT1I CCWWGG 1 cut(s) 1215
Bst1107I GTATAC 1 cut(s) 1164
Bst2UI CCWGG 3 cut(s) 70, 278, 797
BstBI TTCGAA 1 cut(s) 1226
BstC8I GCNNGC 1 cut(s) 616
BstDEI CTNAG 7 cut(s) 90, 221, 787, 915, 993, 1061, 1251
BstDSI CCRYGG 2 cut(s) 1047, 1215
BstENI CCTNNNNNAGG 1 cut(s) 383
BstF5I GGATG 3 cut(s) 18, 1024, 1129
BstFNI CGCG 1 cut(s) 940
BstH2I RGCGCY 1 cut(s) 848
BstHHI GCGC 3 cut(s) 17, 847, 942
BstKTI GATC 7 cut(s) 592, 598, 720, 1043, 1137, 1284, 1414
BstMAI GTCTC 2 cut(s) 1009, 1269
BstMBI GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
BstMWI GCNNNNNNNGC 4 cut(s) 14, 21, 132, 161
BstNI CCWGG 3 cut(s) 70, 278, 797
BstSCI CCNGG 5 cut(s) 68, 276, 308, 795, 1403
BstSFI CTRYAG 2 cut(s) 228, 882
BstUI CGCG 1 cut(s) 940
BstV1I GCAGC 5 cut(s) 176, 223, 1311, 1314, 1437
BstV2I GAAGAC 2 cut(s) 91, 881
BstX2I RGATCY 2 cut(s) 589, 1411
BstYI RGATCY 2 cut(s) 589, 1411
BstZ17I GTATAC 1 cut(s) 1164
Bsu15I ATCGAT 2 cut(s) 716, 1039
BsuI GTATCC 1 cut(s) 1106
BsuRI GGCC 6 cut(s) 356, 512, 733, 795, 985, 1073
BsuTUI ATCGAT 2 cut(s) 716, 1039
BtgI CCRYGG 2 cut(s) 1047, 1215
BtgZI GCGATG 1 cut(s) 1443
BtsCI GGATG 3 cut(s) 18, 1024, 1129
BtsIMutI CAGTG 3 cut(s) 44, 970, 1346
Cac8I GCNNGC 1 cut(s) 616
CaiI CAGNNNCTG 1 cut(s) 236
CfoI GCGC 3 cut(s) 17, 847, 942
Cfr13I GGNCC 3 cut(s) 72, 355, 694
ClaI ATCGAT 2 cut(s) 716, 1039
CseI GACGC 1 cut(s) 946
CsiI ACCWGGT 1 cut(s) 276
Csp6I GTAC 3 cut(s) 458, 997, 1190
CspCI CAANNNNNGTGG 2 cut(s) 1036, 1071
CviAII CATG 5 cut(s) 392, 586, 778, 1138, 1216
CviQI GTAC 3 cut(s) 458, 997, 1190
DdeI CTNAG 7 cut(s) 90, 221, 787, 915, 993, 1061, 1251
DpnI GATC 7 cut(s) 591, 597, 719, 1042, 1136, 1283, 1413
DpnII GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
DrdI GACNNNNNNGTC 1 cut(s) 278
DriI GACNNNNNGTC 1 cut(s) 942
DseDI GACNNNNNNGTC 1 cut(s) 278
EaeI YGGCCR 1 cut(s) 983
Eam1105I GACNNNNNGTC 1 cut(s) 942
Eco130I CCWWGG 1 cut(s) 1215
Eco147I AGGCCT 1 cut(s) 795
Eco32I GATATC 1 cut(s) 709
Eco47I GGWCC 2 cut(s) 72, 694
Eco47III AGCGCT 1 cut(s) 846
Eco88I CYCGRG 1 cut(s) 519
EcoNI CCTNNNNNAGG 1 cut(s) 383
EcoO109I RGGNCCY 2 cut(s) 355, 694
EcoRII CCWGG 3 cut(s) 68, 276, 795
EcoRV GATATC 1 cut(s) 709
EcoT14I CCWWGG 1 cut(s) 1215
ErhI CCWWGG 1 cut(s) 1215
FaeI CATG 5 cut(s) 395, 589, 781, 1141, 1219
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 3 cut(s) 559, 680, 918
FatI CATG 5 cut(s) 391, 585, 777, 1137, 1215
FbaI TGATCA 1 cut(s) 595
FblI GTMKAC 3 cut(s) 567, 804, 1163
Fnu4HI GCNGC 5 cut(s) 165, 237, 1325, 1328, 1426
FokI GGATG 3 cut(s) 5, 1031, 1136
Fsp4HI GCNGC 5 cut(s) 165, 237, 1325, 1328, 1426
FspBI CTAG 2 cut(s) 183, 317
GlaI GCGC 3 cut(s) 16, 846, 941
GluI GCNGC 5 cut(s) 165, 237, 1325, 1328, 1426
GsaI CCCAGC 1 cut(s) 546
GsuI CTGGAG 1 cut(s) 135
HaeII RGCGCY 1 cut(s) 848
HaeIII GGCC 6 cut(s) 356, 512, 733, 795, 985, 1073
HapII CCGG 2 cut(s) 310, 1404
HgaI GACGC 1 cut(s) 946
HhaI GCGC 3 cut(s) 17, 847, 942
Hin1II CATG 5 cut(s) 395, 589, 781, 1141, 1219
Hin6I GCGC 3 cut(s) 15, 845, 940
HinP1I GCGC 3 cut(s) 15, 845, 940
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HindIII AAGCTT 2 cut(s) 6, 421
HinfI GANTC 3 cut(s) 747, 1183, 1433
HpaII CCGG 2 cut(s) 310, 1404
HphI GGTGA 1 cut(s) 883
Hpy166II GTNNAC 4 cut(s) 271, 568, 805, 1164
Hpy188I TCNGA 7 cut(s) 93, 259, 706, 760, 948, 1234, 1438
Hpy188III TCNNGA 7 cut(s) 341, 383, 428, 519, 593, 683, 1146
Hpy8I GTNNAC 4 cut(s) 271, 568, 805, 1164
HpyAV CCTTC 4 cut(s) 389, 785, 862, 1300
HpyCH4V TGCA 5 cut(s) 239, 301, 614, 1298, 1379
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 21, 132, 161
HpyF3I CTNAG 7 cut(s) 90, 221, 787, 915, 993, 1061, 1251
Hsp92II CATG 5 cut(s) 395, 589, 781, 1141, 1219
HspAI GCGC 3 cut(s) 15, 845, 940
KflI GGGWCCC 1 cut(s) 694
KpnI GGTACC 1 cut(s) 1193
Ksp22I TGATCA 1 cut(s) 595
Kzo9I GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
LmnI GCTCC 4 cut(s) 46, 388, 1038, 1154
Lsp1109I GCAGC 5 cut(s) 176, 223, 1311, 1314, 1437
LweI GCATC 1 cut(s) 1311
MabI ACCWGGT 1 cut(s) 276
MaeI CTAG 2 cut(s) 183, 317
MaeIII GTNAC 6 cut(s) 463, 959, 978, 1087, 1262, 1358
MalI GATC 7 cut(s) 591, 597, 719, 1042, 1136, 1283, 1413
MboI GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
MboII GAAGA 7 cut(s) 91, 94, 188, 511, 671, 886, 1396
MfeI CAATTG 1 cut(s) 1337
MflI RGATCY 2 cut(s) 589, 1411
MluCI AATT 7 cut(s) 140, 609, 1094, 1128, 1244, 1337, 1394
MroXI GAANNNNTTC 3 cut(s) 98, 378, 423
MseI TTAA 3 cut(s) 137, 723, 1242
MslI CAYNNNNRTG 1 cut(s) 739
MspA1I CMGCKG 3 cut(s) 167, 542, 914
MspI CCGG 2 cut(s) 310, 1404
MspR9I CCNGG 5 cut(s) 70, 278, 310, 797, 1405
MunI CAATTG 1 cut(s) 1337
Mva1269I GAATGC 1 cut(s) 1405
MvaI CCWGG 3 cut(s) 70, 278, 797
MvnI CGCG 1 cut(s) 940
MwoI GCNNNNNNNGC 4 cut(s) 14, 21, 132, 161
NciI CCSGG 2 cut(s) 310, 1405
NcoI CCATGG 1 cut(s) 1215
NdeII GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
NlaIII CATG 5 cut(s) 395, 589, 781, 1141, 1219
NlaIV GGNNCC 3 cut(s) 695, 696, 1191
NspV TTCGAA 1 cut(s) 1226
OliI CACNNNNGTG 1 cut(s) 739
PaeR7I CTCGAG 1 cut(s) 519
PceI AGGCCT 1 cut(s) 795
PcsI WCGNNNNNNNCGW 2 cut(s) 33, 944
PctI GAATGC 1 cut(s) 1405
PdmI GAANNNNTTC 3 cut(s) 98, 378, 423
PfeI GAWTC 3 cut(s) 747, 1183, 1433
PkrI GCNGC 5 cut(s) 166, 238, 1326, 1329, 1427
PpuMI RGGWCCY 1 cut(s) 694
PsiI TTATAA 1 cut(s) 956
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 3 cut(s) 68, 276, 795
PspFI CCCAGC 1 cut(s) 542
PspGI CCWGG 3 cut(s) 68, 276, 795
PspN4I GGNNCC 3 cut(s) 695, 696, 1191
PspPI GGNCC 3 cut(s) 72, 355, 694
PspPPI RGGWCCY 1 cut(s) 694
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 2 cut(s) 589, 1411
PvuII CAGCTG 3 cut(s) 167, 542, 914
RsaI GTAC 3 cut(s) 459, 998, 1191
RsaNI GTAC 3 cut(s) 458, 997, 1190
RseI CAYNNNNRTG 1 cut(s) 739
SaqAI TTAA 3 cut(s) 137, 723, 1242
SatI GCNGC 5 cut(s) 165, 237, 1325, 1328, 1426
Sau3AI GATC 7 cut(s) 589, 595, 717, 1040, 1134, 1281, 1411
Sau96I GGNCC 3 cut(s) 72, 355, 694
ScrFI CCNGG 5 cut(s) 70, 278, 310, 797, 1405
SexAI ACCWGGT 1 cut(s) 276
SfaNI GCATC 1 cut(s) 1311
SfcI CTRYAG 2 cut(s) 228, 882
Sfr274I CTCGAG 1 cut(s) 519
SfuI TTCGAA 1 cut(s) 1226
SinI GGWCC 2 cut(s) 72, 694
SlaI CTCGAG 1 cut(s) 519
SmiMI CAYNNNNRTG 1 cut(s) 739
SmlI CTYRAG 3 cut(s) 341, 383, 519
SmoI CTYRAG 3 cut(s) 341, 383, 519
Sse9I AATT 7 cut(s) 140, 609, 1094, 1128, 1244, 1337, 1394
SseBI AGGCCT 1 cut(s) 795
SsiI CCGC 3 cut(s) 22, 479, 835
SspI AATATT 2 cut(s) 766, 952
SspMI CTAG 2 cut(s) 183, 317
StuI AGGCCT 1 cut(s) 795
StyD4I CCNGG 5 cut(s) 68, 276, 308, 795, 1403
StyI CCWWGG 1 cut(s) 1215
TaqI TCGA 6 cut(s) 282, 520, 684, 716, 1039, 1226
TasI AATT 7 cut(s) 140, 609, 1094, 1128, 1244, 1337, 1394
TatI WGTACW 1 cut(s) 996
TfiI GAWTC 3 cut(s) 747, 1183, 1433
Tru1I TTAA 3 cut(s) 137, 723, 1242
Tru9I TTAA 3 cut(s) 137, 723, 1242
TscAI CASTG 3 cut(s) 51, 970, 1353
TseI GCWGC 5 cut(s) 164, 236, 1324, 1327, 1425
TspDTI ATGAA 7 cut(s) 49, 281, 447, 912, 1140, 1319, 1446
TspGWI ACGGA 1 cut(s) 1167
TspRI CASTG 3 cut(s) 51, 970, 1353
VpaK11BI GGWCC 2 cut(s) 72, 694
XagI CCTNNNNNAGG 1 cut(s) 383
XapI RAATTY 1 cut(s) 1244
XhoI CTCGAG 1 cut(s) 519
XmiI GTMKAC 3 cut(s) 567, 804, 1163
XmnI GAANNNNTTC 3 cut(s) 98, 378, 423
XspI CTAG 2 cut(s) 183, 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.