pycom17g02180

Bacterial Ig-like domain 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0014163
Physical Location & Seq
Reverse (-)
1364476 .. 1376145
11670 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 5910 bp
ATGGATTCAGTGCGGCGGATGAACATGTTGAGATACACTGTTCTGCTCGGTTTGTCTCTTCTTCTGGTGGCGGGCCAAACGGCGTCGCATTTGGGCTCCGGTCCGCACATTGCAGACGTCAACATTCTGCTGCCTCCCAGAATGACTCATCCGGTCGAGTATCGGCTCCAGGGGAGCGATGGTTGCTTCAAATGGTCATGGGATCACCACGACGTTCTGTCTGTTCTGCCGGAATATAACTCAACTAGTCACTGCTCGACGAGTGCACTATTGAGATCAATTGCTCCGTTTAGTGGCCGGAAGGAAACTGCTGTTTATGCTGCTGATGTAAATACTGGAGTTGTGATTCGCTGCAAAGTTTTTATTGACAAGCTTTCTAGGATTCAGATATTTCATAATTCTGTTAAACTTGACTTGGATGGGCTTGCCACGCTTCAAGTTCGTGCCTTTGACAGCGAAGAAAATGTGTTTTCGTCACTGGTGGGATTGCAATTTATGTGGCAGCTGGAAACCAATGAACTGCCTCACCACCTTGCTCATGTTCCTCTAAAGGATTCTCCCCTGAGTGACTGTGGTGGGTTGTGTGGAGACCTAGATATCCAAATAAGCCTTGAAGATAATGGTGTATTTTCCGATCTGTACGTTGTAAAGGGAATCGAAATTGGGCATGAGATTGTTTCTGTAAATTTGCTTGAGCCACGATTCCAGCACATGACTGACAGAATTGCTCTTACTGTAGCAGAAGCCATGTCACTTGATCCTCCCTCACCTGTTTTTGTCCTCGTTGGTGCTGCTGTTCAGTATAGTCTAAAAATTATCCGTGGGAACAAAGCTCAAGTGGTAACTTTGCCGTCTCCACATCATCGATGGTCTGTTTCAAACTCTTCTGTTGCTCGTGTGGACTCTATGATGGGTTTGGCTAATGCGTTTAGCTTAGGAATTACAAACACCATAGTTGAAGATACAAGGGTTGCTGGCCACATACAAGTGTCGTCACTTAATGTTGTTCTGCCAGATTCTTTATCTTTATACATGGTACCTTTGTCTACTTCTGGCGATCTTGTTGAGGGAATCGAAGCAATTCCATCCATGACACGTTGGTATGGTGTTTCTGGCCGTCAGTACCTCATTCAAATGAAGGTTTTCTCACAAGGTCCAGATGCACAAGAAATCTATCTTACAGAGAGTGATGATTTAAAGTTGTCCAGTGACCAGTCTGACTACTGGAGACTTTCTCCTGTATCAAACAATATTGCAATCAAACATGGCTGGCAGAATTCTATGATCCTGAAGGCAACTTCACAGGGACAGGGTAAATTGGCAGCATCTTTGACTTACTTTAGTGCATTAAATGAGAAGAAGGAGGTTCTCAAGGTCATGCAAGAAGTCGTGGTTTGTGATCAAGTCCAGTTTACTTTGGATAAAAGTGGTGCATCTCCAACCATTCTCCTTCCGTGGGCCCCTTCTGTTTATCAGGAGGTGGAGCTAAAGGCTACAGGAGGTTGTGCTAAAGCATCCAGTGACTACAAATGGTTCTCTTCAGACATGGGTATCGTGTCTGTATCTGCTTCTGGGGTTGTCCAGGCTAAGAAGCCTGGTAAAGCTACCATTAAAGTGCTATCCATTTTTGATTCATTTAATTATGATGAGGTTGCCATTGAAGTCTCTGTTCCAGCATCTATGGTCATGCTCCGGAACTTCCCTGTTGAGACTGTTGTAGGAACACATCTTCAAGCTGCTGTAACAATGAAAGCGTCAAATGGTGCCTACTTTTATAGATGTGATGCATTCAGTTCCTTCATAAAGTGGAAAGCAGGGAGTGAGTCTTTCATTATTGTCAATGCAACAGTTGAGGCACCCACTTTAGACATTTTAGGGAATGCTGAGTTCTATGCATCAAGTTCTGGTCCCGCATGTTCACGGGCATATTTATATGCCTCGGTTTCTGGTCGAGCAACCCTTCATGCTACATTATCAAAAGAATATCACAACTTGGATGGCTCTTTTAGTGGGCCCGTTGTTTTAAAAGCATCTTCACTTATTGCGGCATATTCACCGCTTAGCATTCGTCAGGCAGGTGATGGAAACCATTTTGGTGGCTACTTTTTTGATTTGGCTCAAACAGAAACTGATAGGCAGTTGGTAAATTTGGACAAAATATACCTTGTCCCTGGAACGCATCTGGATGTTATGCTTCTTGGTGGACCTGAAAAGTGGAACAATGGTATTGACTTTGTTGAAACTACGGATATCTTAAATGAAGGACATGGTCATATTGACAATGGGGCTTCTGTGCAATGGTTATCTGATAGCTATAAGAGTCTGTACAGAGTTTCATGTCAAATGCTGGGAACCTATAAAATTGTTTTCAAACGTGGTAATCTGGTTGGGGATGGCCATCCTCTACCTGCAGTAGCAGAAGTTCTGCTGTATCTTACGTGTAGCATTCCTACCTCAATTGTTCTGCTAGCTGATGAACATGTAAATGAACGTGAAGTTATACGGACTGCAATTCAGGCTGATCGCAGTTCTGGGAAAATCCGTGTCACCCCTGTTACTGTGGCAAATGGGCGCACCATCAGATTAGCTGCTGTTGGTATTAGTAACTCTGGAGAAGCGTTTGCAAACTCATCTTCTCTTTCCTTGAGGTGGGAACTTATCAATTGTGGCGAGATGGCTAGTTGGGATGATGCTGATGATTTAGAGAGGTCGGAGCACAGTTGGGAGAGGTTATTGAGCTTGAAAAATGAGTCAGGCCTGTGTATAGTTCGTGCTACTGTCATTGGTTTCAGAGATAACATGGGTGCTCATAAGTCTGTTCCACTGCTTGAGGATTCAGATAATGTTCTTACAGATGCAATTCGTCTACAGCTTGTTTCTACATTAATTGTCAGCCCAGAGTTCAATCTGGTGTATTTCAATCCCAATGCTAAGTTAAACCTGTCAATTACTGGTGGGAGCTGTTTCTTGGAAGCTACTGTGAATAATTCTCGAGTACTGGAAGTCGTTCAAGCCCCAACAGGTTTACAGTGCTCACAACTGATCCTGTCTCCTAAAGCTATGGGGACGGCACTTGTGACAGTTTACGATATTGGACTTGCTCCTCCCCTTGCGGCTTCTGCTGTGGTACAAGTTGTAGACATTGACTGGATAAAGATTGTGTCACCAGAGGAAATAAGCCTTATGGAAGGGAACTCGCAGACTATTGATTTGATGGCTGGGATTAGTGATGGGAGGACTTTCGATGCTTATCAGTTTGCCTACATGAATATTCATGTGCATGTTGAGGATCATATTATTGAGGTGTTAGACATTAATGATATCTCAAGCCCAGGTGGTGGATTTGTTAATATCCCGAAATTTAAGATTTTGGCTACACATCTTGGGATCACCACTTTCTTTGTGAGTGCTGTACAACAATCTGGACATGAAATTTTGAGTCAACCAATAATGGTGGAAGTCTATGCACCACCTGTAATCTACCCACAAGAAATTTTCCTTGTACCTGGAGCATCTTATGTGCTTACCGTGAAAGGAGGACCAACAGTTGGTGTATATGTTGAATATATGAGTCTGGATGATGAAATAGTGACAATGCATAGATCTTTTGGACGGCTGTCTGCTTTGTCACCTGGAAACACTACTATTCGCGCCACATTCTTCAGAAATGGAGATATTGTGATTTGTGAAGCATATGGCAGTGTTAAAGTTGGAGTTCCTTCTTTGGTGACACTGAATGCACAAAGTGATCTGCTTGGTGTTGGCCATGAGATGCCAATATATCCTTTATTTTCTGAGGGTGATTTGTTTTCCGTTTATGAGCTCTGCCAAAACTACCGGTGGACTATAGAAGATGAAAAGGTTTTGAGCTTTTATTTAGAGCACTTCACTGGTGAGAAGTATGGTTCTCAGTTGGAACGTTCAGAAAAGATTCAATTCCCTAGCCATATGAGCGAGGAAGAGCTTGGTTTTATCAAAGTCATATCTGGAAGATTTGCAGGGAGAACAAACGTTGCAGTCTCGTTCTCATGTGAATTTATATCTTCTGGTTCCAAATCATGGAGAAGAGTTTACAATGCATCTCTATCAATATCGGTGGTGCCTGATCTCCCTCTTGCTCTTGGAGTCCCAATAACCTGGGTTCTTCCTCCTCATTATACTACAACAAGTATTTTACCTTCATCTTCAGAATTGCATGGCCAAAGGGATACTCAGAGTCATAAAGGAATTATTATCTATTCCTTATTAAAAAATCTCCCTGAAAAGAATGAAGGTGTGCAAAAGGATGCTATTTCCATCGACGGAGACAGAATAAAGACATCAGAGAGTAACAATCTTGCATGCATTCAGGCAAAAGATCGTATGACGGGTAGAATTGAGATTGCTGCTTGCATCAAAGTTGCTGAGGTGTCTCAAATAAGAATTACGAACAAGGAGTTACCATTTCACGGGATCAATCTTGCTGTTGGTGCTGAAATTTCTCTTCCAGTAGTCTACCTTGATGTGATAGGAAACCCTTTCTATGAAGCACACGGTGCCATTCTCTTTGATGTTGCAATCAACTCTCCTGATGTTGTGTCCATAAACAACAGCAGCAACACGCATGTTGGCGGTGGAAATATCCATCTCAAGGCGATGCGACATGGTAGAGCTCTTGTGCGGATATCCATCCATCGTATGCCTCAGAAGTCGGACTATATCCTGATATCAGTGGGTGCTCATATACATCCTCAAAACCCAGTTCTTCGAACAGGAAGCCATCTTAACTTCAGTATAGAAGGCTTAAATGATGAAATTTCTGGCCGTTGGGGAACTGCAAATGGAAGTGTCATATCTGTATCCCCATTGTCTGGGGTGGCTGAAGTAGTTGGGGAAGGTACAACTCAAGTATATTTTGAAGCTTCAAGTTTGAAGTTGCGAACAACAGTTATAGTGCCAACAGAGGATATTATTTCTGTGGATGCTCCAACTGAGACACTAACAAATGTTCCCTTCCCAACTAAAGGATATAACTTCTATGTGAAGATCAGTACTGACAACAAGTTTAAGGCGCTTGGAAACACTAAGGAACTCCAGTATGACTGTAGAGTTGACCCGCCTTTTGTTGGGTATGCAAAACCATGGTTAGATCTTGATACCAGTAGCTCATACTGCCGCTTTTTTCCTTACTCACCGGAGCATCTGGTTCGTTTGGTACCCAAGTCAAAGGATATGAAATCAGATATATCTGTTTCCATCAATGCTTCACTGAGAGAAGCAGATCATGTTTCCGGATCTGCTTCTGCTCTTTTTGTTGGAGGGTTTTCCATTTTAGAGATGGGCAAGGACTCAATGCAGTTGAAGCTGACCCCAGACTCTAACAAGACTACTATTACAATCCTGGGAAACACAGATGTTGAAATCTATTGGCATGAGCGGGATTCTTTACTCATTACTCTCATCCATAAAGAAGGTTCTGGGATCGGTGGGCATGCAAAATATGAGGTCAGAATGCTAGGATCCAAGAGATTCAAAGATACAATTTTCATTACACTTCCAGCCAGTGGTCAGAGTGTGGAAATTGATGTCAACGGCGACCCTGGAGATAAAACGGCATCTGAAACTATCATCAATCATACACTTTGGGCAACGGTGCTTGGATGTCTTGCTCTATCGGGTTTGACTGTTGCTTTCACCATATGTTATTCGGCGAACAGACTGGATAGATCTCAAACATCCATTAACGCTCCAGCCACTCCAAGCATAGCAGGCCCAGCCACACCCGAACGTACTAGCAGCCCAGCTACTGTGAGCGAACAGTCTCCTCGAACACCTCAGCCGTTCATAGATTACGTTAGAAGAACAATAGACGAAACTCCATACTACAGGCGAGAGCCGCGGAGGAGAGTTAATCCACAGAATACGTTCTAG

Protein Analysis

1970

Amino Acids

215.04

Weight (kDa)

5.64

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ig_NUP210_1st PF22967 41 - 123 1.6e-16 NUP210 Ig-like domain 1
Ig_NUP210_2nd PF22969 143 - 238 5.2e-10 NUP210 Ig-like domain 2
Ig_NUP210_3rd PF22963 250 - 325 1.9e-06 NUP210 Ig-like domain 3
Ig_NUP210_5th PF26182 481 - 555 7.1e-07 NUP210 Ig-like domain 5
Big_2 PF02368 493 - 541 3.4e-06 Bacterial Ig-like domain (group 2)
Ig_NUP210_7th PF22962 716 - 815 5.7e-14 NUP210 Ig-like domain 7
Ig_GP210_15th PF24425 1648 - 1765 2.7e-50 Nuclear pore complex protein GP210, Ig-like domain
Ig_GP210_16th PF24427 1777 - 1857 2.3e-35 Nuclear pore complex protein GP210, Ig-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014163)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10590 AT5G40480
fragaria_vesca FvH4_6g51430
malus_domestica MD17G1026700.v1.1
prunus_persica Prupe.3G292000_v2.0.a1 Prupe.3G292000_v2.0.a1
pyrus_communis pycom17g02180
rosa_chinensis RchiOBHm_Chr2g0173101
rosa_laevigata RLG00000022158
rosa_multiflora Rmu_sc0011236.1_g000011
rosa_roxburghii Rroxscaffold_2G00079240
rosa_rugosa Rorug02G0565200
rosa_samantha Rh2AG645300 Rh2BG656000 Rh2CG621100 Rh2DG669400
rosa_wichuraiana Rw2G053000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2066
AatII GACGTC 1 cut(s) 120
Acc36I ACCTGC 2 cut(s) 2066, 2416
Acc65I GGTACC 2 cut(s) 1036, 5194
AccB1I GGYRCC 6 cut(s) 1036, 1763, 1855, 4099, 4535, 5194
AccB7I CCANNNNNTGG 5 cut(s) 3338, 3548, 4059, 4850, 5543
AccBSI CCGCTC 1 cut(s) 5416
AccI GTMKAC 4 cut(s) 1046, 2866, 3138, 4494
AccII CGCG 2 cut(s) 3651, 5878
AccIII TCCGGA 2 cut(s) 1692, 5270
AclI AACGTT 2 cut(s) 3919, 4011
AcoI YGGCCR 7 cut(s) 295, 976, 1114, 2395, 3763, 4198, 4801
AcsI RAATTY 9 cut(s) 685, 1276, 2146, 3359, 3432, 3492, 4034, 4476, 4794
AcuI CTGAAG 6 cut(s) 1310, 1524, 3646, 4170, 4753, 4881
AcyI GRCGYC 2 cut(s) 83, 117
AdeI CACNNNGTG 2 cut(s) 3746, 4535
AflIII ACRYGT 4 cut(s) 24, 1094, 2438, 2479
AgeI ACCGGT 1 cut(s) 3837
AhdI GACNNNNNGTC 1 cut(s) 217
AhlI ACTAGT 1 cut(s) 245
Alw21I GWGCWC 8 cut(s) 268, 2718, 2809, 3035, 3825, 3885, 4654, 4720
Alw44I GTGCAC 1 cut(s) 264
AlwNI CAGNNNCTG 2 cut(s) 2129, 5786
Ama87I CYCGRG 1 cut(s) 2991
Aor13HI TCCGGA 2 cut(s) 1692, 5270
ApaI GGGCCC 2 cut(s) 1462, 2016
ApaLI GTGCAC 1 cut(s) 264
ApoI RAATTY 9 cut(s) 685, 1276, 2146, 3359, 3432, 3492, 4034, 4476, 4794
ArsI GACNNNNNNTTYG 4 cut(s) 3193, 3225, 5084, 5116
AseI ATTAAT 2 cut(s) 2885, 3315
AsiGI ACCGGT 1 cut(s) 3837
Asp700I GAANNNNTTC 5 cut(s) 1080, 1142, 3006, 3930, 5903
Asp718I GGTACC 2 cut(s) 1036, 5194
AspLEI GCGC 3 cut(s) 2574, 3653, 5053
AsuII TTCGAA 1 cut(s) 4747
AsuNHI GCTAGC 1 cut(s) 2467
AvaI CYCGRG 1 cut(s) 2991
AvaII GGWCC 5 cut(s) 101, 1154, 1907, 2204, 3539
BaeGI GKGCMC 3 cut(s) 268, 1462, 2016
BaeI ACNNNNGTAYC 8 cut(s) 954, 987, 1028, 1061, 1534, 1567, 5186, 5219
BalI TGGCCA 4 cut(s) 978, 2397, 3765, 4200
BamHI GGATCC 1 cut(s) 5498
BanI GGYRCC 6 cut(s) 1036, 1763, 1855, 4099, 4535, 5194
BanII GRGCYC 5 cut(s) 98, 1462, 2016, 3825, 4654
BarI GAAGNNNNNNTAC 2 cut(s) 4162, 4194
BauI CACGAG 1 cut(s) 894
Bbv12I GWGCWC 8 cut(s) 268, 2718, 2809, 3035, 3825, 3885, 4654, 4720
BbvCI CCTCAGC 2 cut(s) 4404, 5814
BceAI ACGGC 9 cut(s) 96, 835, 1101, 3084, 3629, 4788, 5587, 5607, 5803
BcgI CGANNNNNNTGC 2 cut(s) 5168, 5202
BciVI GTATCC 2 cut(s) 4201, 4849
BclI TGATCA 1 cut(s) 1399
BcuI ACTAGT 1 cut(s) 245
BfaI CTAG 9 cut(s) 246, 378, 593, 2468, 2679, 3942, 5495, 5772, 5908
BfmI CTRYAG 7 cut(s) 735, 1494, 2409, 2867, 3846, 5083, 5863
BfoI RGCGCY 1 cut(s) 5054
BfuAI ACCTGC 2 cut(s) 2066, 2416
BfuI GTATCC 2 cut(s) 4201, 4849
BglII AGATCT 3 cut(s) 3602, 5128, 5705
BlpI GCTNAGC 1 cut(s) 2060
BmcAI AGTACT 2 cut(s) 2997, 5032
Bme18I GGWCC 5 cut(s) 101, 1154, 1907, 2204, 3539
BmeRI GACNNNNNGTC 1 cut(s) 217
BmeT110I CYCGRG 1 cut(s) 2991
BmrI ACTGGG 1 cut(s) 4733
BmtI GCTAGC 1 cut(s) 2471
BmuI ACTGGG 1 cut(s) 4733
BoxI GACNNNNGTC 1 cut(s) 3616
BplI GAGNNNNNCTC 2 cut(s) 1219, 1251
BpmI CTGGAG 8 cut(s) 152, 357, 1246, 2631, 3528, 5057, 5601, 5712
Bpu10I CCTNAGC 3 cut(s) 934, 4404, 5814
Bpu1102I GCTNAGC 1 cut(s) 2060
Bpu14I TTCGAA 1 cut(s) 4747
BpuEI CTTGAG 8 cut(s) 713, 819, 1355, 2665, 2849, 3310, 4613, 4869
Bsa29I ATCGAT 1 cut(s) 865
BsaAI YACGTR 1 cut(s) 2439
BsaBI GATNNNNATC 3 cut(s) 2397, 3249, 4667
BsaHI GRCGYC 2 cut(s) 83, 117
BsaI GGTCTC 1 cut(s) 582
BsaWI WCCGGW 6 cut(s) 98, 151, 1692, 3837, 5173, 5270
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 3663, 3693
Bse118I RCCGGY 1 cut(s) 3837
Bse3DI GCAATG 2 cut(s) 108, 2303
Bse8I GATNNNNATC 3 cut(s) 2397, 3249, 4667
BseAI TCCGGA 2 cut(s) 1692, 5270
BseCI ATCGAT 1 cut(s) 865
BseJI GATNNNNATC 3 cut(s) 2397, 3249, 4667
BseMI GCAATG 2 cut(s) 108, 2303
BseRI GAGGAG 4 cut(s) 3093, 4140, 5793, 5896
BseSI GKGCMC 3 cut(s) 268, 1462, 2016
BseYI CCCAGC 4 cut(s) 2347, 3218, 5752, 5779
Bsh1236I CGCG 2 cut(s) 3651, 5878
Bsh1285I CGRYCG 1 cut(s) 156
BshNI GGYRCC 6 cut(s) 1036, 1763, 1855, 4099, 4535, 5194
BshTI ACCGGT 1 cut(s) 3837
BshVI ATCGAT 1 cut(s) 865
BsiEI CGRYCG 1 cut(s) 156
BsiHKAI GWGCWC 8 cut(s) 268, 2718, 2809, 3035, 3825, 3885, 4654, 4720
BsiHKCI CYCGRG 1 cut(s) 2991
BsiSI CCGG 8 cut(s) 99, 152, 230, 298, 1693, 3838, 5174, 5271
BslFI GGGAC 5 cut(s) 1320, 1893, 2153, 3079, 4112
BsmBI CGTCTC 1 cut(s) 858
BsmFI GGGAC 5 cut(s) 1320, 1893, 2153, 3079, 4112
BsmI GAATGC 7 cut(s) 1787, 1885, 2064, 2445, 3742, 4344, 5496
Bso31I GGTCTC 1 cut(s) 582
BsoBI CYCGRG 1 cut(s) 2991
Bsp119I TTCGAA 1 cut(s) 4747
Bsp120I GGGCCC 2 cut(s) 1458, 2012
Bsp13I TCCGGA 2 cut(s) 1692, 5270
Bsp1407I TGTACA 2 cut(s) 2325, 3412
Bsp1720I GCTNAGC 1 cut(s) 2060
Bsp19I CCATGG 1 cut(s) 5120
BspDI ATCGAT 1 cut(s) 865
BspEI TCCGGA 2 cut(s) 1692, 5270
BspFNI CGCG 2 cut(s) 3651, 5878
BspMAI CTGCAG 1 cut(s) 2413
BspMI ACCTGC 2 cut(s) 2066, 2416
BspOI GCTAGC 1 cut(s) 2471
BspQI GCTCTTC 1 cut(s) 3954
BspT104I TTCGAA 1 cut(s) 4747
BspT107I GGYRCC 6 cut(s) 1036, 1763, 1855, 4099, 4535, 5194
BspTNI GGTCTC 1 cut(s) 582
BsrBI CCGCTC 1 cut(s) 5416
BsrDI GCAATG 2 cut(s) 108, 2303
BsrFI RCCGGY 1 cut(s) 3837
BsrGI TGTACA 2 cut(s) 2325, 3412
BssAI RCCGGY 1 cut(s) 3837
BssNI GRCGYC 2 cut(s) 83, 117
BssSI CACGAG 1 cut(s) 894
BssT1I CCWWGG 1 cut(s) 5120
Bst2BI CACGAG 1 cut(s) 894
Bst6I CTCTTC 6 cut(s) 63, 889, 1543, 3954, 4060, 4488
BstACI GRCGYC 2 cut(s) 83, 117
BstAPI GCANNNNNTGC 1 cut(s) 4535
BstAUI TGTACA 2 cut(s) 2325, 3412
BstBAI YACGTR 1 cut(s) 2439
BstBI TTCGAA 1 cut(s) 4747
BstC8I GCNNGC 9 cut(s) 73, 426, 976, 1271, 2469, 4342, 4390, 5472, 5749
BstDSI CCRYGG 4 cut(s) 820, 1454, 5120, 5876
BstFNI CGCG 2 cut(s) 3651, 5878
BstH2I RGCGCY 1 cut(s) 5054
BstHHI GCGC 3 cut(s) 2574, 3653, 5053
BstMCI CGRYCG 1 cut(s) 156
BstNSI RCATGY 7 cut(s) 28, 1917, 2483, 3284, 4344, 4607, 5474
BstPAI GACNNNNGTC 1 cut(s) 3616
BstSFI CTRYAG 7 cut(s) 735, 1494, 2409, 2867, 3846, 5083, 5863
BstSLI GKGCMC 3 cut(s) 268, 1462, 2016
BstUI CGCG 2 cut(s) 3651, 5878
BstX2I RGATCY 5 cut(s) 3602, 5128, 5273, 5498, 5705
BstXI CCANNNNNNTGG 2 cut(s) 2096, 4137
BstYI RGATCY 5 cut(s) 3602, 5128, 5273, 5498, 5705
Bsu15I ATCGAT 1 cut(s) 865
BsuI GTATCC 2 cut(s) 4201, 4849
BsuTUI ATCGAT 1 cut(s) 865
BtgI CCRYGG 4 cut(s) 820, 1454, 5120, 5876
BtgZI GCGATG 2 cut(s) 192, 4649
BtsI GCAGTG 3 cut(s) 250, 2822, 3706
BveI ACCTGC 2 cut(s) 2066, 2416
Cac8I GCNNGC 9 cut(s) 73, 426, 976, 1271, 2469, 4342, 4390, 5472, 5749
CaiI CAGNNNCTG 2 cut(s) 2129, 5786
CfoI GCGC 3 cut(s) 2574, 3653, 5053
Cfr10I RCCGGY 1 cut(s) 3837
Cfr42I CCGCGG 1 cut(s) 5879
ClaI ATCGAT 1 cut(s) 865
CpoI CGGWCCG 1 cut(s) 101
CseI GACGC 2 cut(s) 72, 1743
CspAI ACCGGT 1 cut(s) 3837
CspCI CAANNNNNGTGG 8 cut(s) 479, 514, 3382, 3417, 3435, 3470, 4077, 4112
CspI CGGWCCG 1 cut(s) 101
DraI TTTAAA 2 cut(s) 1197, 2025
DraIII CACNNNGTG 2 cut(s) 3746, 4535
DriI GACNNNNNGTC 1 cut(s) 217
EaeI YGGCCR 7 cut(s) 295, 976, 1114, 2395, 3763, 4198, 4801
Eam1104I CTCTTC 6 cut(s) 63, 889, 1543, 3954, 4060, 4488
Eam1105I GACNNNNNGTC 1 cut(s) 217
EarI CTCTTC 6 cut(s) 63, 889, 1543, 3954, 4060, 4488
EciI GGCGGA 1 cut(s) 31
Ecl136II GAGCTC 2 cut(s) 3823, 4652
Eco130I CCWWGG 1 cut(s) 5120
Eco147I AGGCCT 1 cut(s) 2757
Eco24I GRGCYC 5 cut(s) 98, 1462, 2016, 3825, 4654
Eco31I GGTCTC 1 cut(s) 582
Eco32I GATATC 5 cut(s) 598, 2251, 3322, 4665, 4707
Eco47I GGWCC 5 cut(s) 101, 1154, 1907, 2204, 3539
Eco53kI GAGCTC 2 cut(s) 3823, 4652
Eco57I CTGAAG 6 cut(s) 1310, 1524, 3646, 4170, 4753, 4881
Eco88I CYCGRG 1 cut(s) 2991
EcoICRI GAGCTC 2 cut(s) 3823, 4652
EcoO109I RGGNCCY 1 cut(s) 1459
EcoRI GAATTC 1 cut(s) 1276
EcoRV GATATC 5 cut(s) 598, 2251, 3322, 4665, 4707
EcoT14I CCWWGG 1 cut(s) 5120
EcoT22I ATGCAT 5 cut(s) 1789, 1897, 3600, 4081, 4346
EcoT38I GRGCYC 5 cut(s) 98, 1462, 2016, 3825, 4654
ErhI CCWWGG 1 cut(s) 5120
Esp3I CGTCTC 1 cut(s) 858
FaqI GGGAC 5 cut(s) 1320, 1893, 2153, 3079, 4112
FauI CCCGC 4 cut(s) 64, 1918, 5103, 5409
FauNDI CATATG 3 cut(s) 3694, 3948, 5678
FbaI TGATCA 1 cut(s) 1399
FblI GTMKAC 4 cut(s) 1046, 2866, 3138, 4494
FriOI GRGCYC 5 cut(s) 98, 1462, 2016, 3825, 4654
FspBI CTAG 9 cut(s) 246, 378, 593, 2468, 2679, 3942, 5495, 5772, 5908
GlaI GCGC 3 cut(s) 2573, 3652, 5052
GsaI CCCAGC 4 cut(s) 2351, 3222, 5756, 5783
GsuI CTGGAG 8 cut(s) 152, 357, 1246, 2631, 3528, 5057, 5601, 5712
HaeII RGCGCY 1 cut(s) 5054
HapII CCGG 8 cut(s) 99, 152, 230, 298, 1693, 3838, 5174, 5271
HgaI GACGC 2 cut(s) 72, 1743
HhaI GCGC 3 cut(s) 2574, 3653, 5053
Hin1I GRCGYC 2 cut(s) 83, 117
Hin6I GCGC 3 cut(s) 2572, 3651, 5051
HinP1I GCGC 3 cut(s) 2572, 3651, 5051
HincII GTYRAC 4 cut(s) 121, 3443, 5092, 5569
HindII GTYRAC 4 cut(s) 121, 3443, 5092, 5569
HindIII AAGCTT 2 cut(s) 371, 4899
HpaII CCGG 8 cut(s) 99, 152, 230, 298, 1693, 3838, 5174, 5271
Hpy99I CGWCG 4 cut(s) 88, 215, 262, 4304
Hsp92I GRCGYC 2 cut(s) 83, 117
HspAI GCGC 3 cut(s) 2572, 3651, 5051
Kpn2I TCCGGA 2 cut(s) 1692, 5270
KpnI GGTACC 2 cut(s) 1040, 5198
Ksp22I TGATCA 1 cut(s) 1399
KspI CCGCGG 1 cut(s) 5879
LguI GCTCTTC 1 cut(s) 3954
MaeI CTAG 9 cut(s) 246, 378, 593, 2468, 2679, 3942, 5495, 5772, 5908
MbiI CCGCTC 1 cut(s) 5416
MfeI CAATTG 3 cut(s) 279, 2457, 2662
MflI RGATCY 5 cut(s) 3602, 5128, 5273, 5498, 5705
MlsI TGGCCA 4 cut(s) 978, 2397, 3765, 4200
MluNI TGGCCA 4 cut(s) 978, 2397, 3765, 4200
MmeI TCCRAC 7 cut(s) 1463, 2691, 3691, 3894, 4671, 4991, 5275
Mox20I TGGCCA 4 cut(s) 978, 2397, 3765, 4200
Mph1103I ATGCAT 5 cut(s) 1789, 1897, 3600, 4081, 4346
MroI TCCGGA 2 cut(s) 1692, 5270
MroXI GAANNNNTTC 5 cut(s) 1080, 1142, 3006, 3930, 5903
MscI TGGCCA 4 cut(s) 978, 2397, 3765, 4200
MslI CAYNNNNRTG 7 cut(s) 986, 1133, 1613, 2094, 2184, 2484, 3279
Msp20I TGGCCA 4 cut(s) 978, 2397, 3765, 4200
MspA1I CMGCKG 2 cut(s) 505, 5878
MspI CCGG 8 cut(s) 99, 152, 230, 298, 1693, 3838, 5174, 5271
MunI CAATTG 3 cut(s) 279, 2457, 2662
Mva1269I GAATGC 7 cut(s) 1787, 1885, 2064, 2445, 3742, 4344, 5496
MvnI CGCG 2 cut(s) 3651, 5878
NcoI CCATGG 1 cut(s) 5120
NdeI CATATG 3 cut(s) 3694, 3948, 5678
NheI GCTAGC 1 cut(s) 2467
NsiI ATGCAT 5 cut(s) 1789, 1897, 3600, 4081, 4346
NspI RCATGY 7 cut(s) 28, 1917, 2483, 3284, 4344, 4607, 5474
NspV TTCGAA 1 cut(s) 4747
PaeI GCATGC 2 cut(s) 4344, 5474
PaeR7I CTCGAG 1 cut(s) 2991
PaqCI CACCTGC 1 cut(s) 2066
PceI AGGCCT 1 cut(s) 2757
PciI ACATGT 2 cut(s) 24, 2479
PciSI GCTCTTC 1 cut(s) 3954
PctI GAATGC 7 cut(s) 1787, 1885, 2064, 2445, 3742, 4344, 5496
PdmI GAANNNNTTC 5 cut(s) 1080, 1142, 3006, 3930, 5903
PflFI GACNNNGTC 1 cut(s) 2268
PflMI CCANNNNNTGG 5 cut(s) 3338, 3548, 4059, 4850, 5543
PinAI ACCGGT 1 cut(s) 3837
Ppu21I YACGTR 1 cut(s) 2439
PscI ACATGT 2 cut(s) 24, 2479
PshAI GACNNNNGTC 1 cut(s) 3616
PshBI ATTAAT 2 cut(s) 2885, 3315
Psp124BI GAGCTC 2 cut(s) 3825, 4654
Psp1406I AACGTT 2 cut(s) 3919, 4011
PspFI CCCAGC 4 cut(s) 2347, 3218, 5752, 5779
PspOMI GGGCCC 2 cut(s) 1458, 2012
PsrI GAACNNNNNNTAC 2 cut(s) 2406, 2438
PstI CTGCAG 1 cut(s) 2413
PstNI CAGNNNCTG 2 cut(s) 2129, 5786
PsuI RGATCY 5 cut(s) 3602, 5128, 5273, 5498, 5705
PsyI GACNNNGTC 1 cut(s) 2268
PvuII CAGCTG 1 cut(s) 505
RseI CAYNNNNRTG 7 cut(s) 986, 1133, 1613, 2094, 2184, 2484, 3279
Rsr2I CGGWCCG 1 cut(s) 101
RsrII CGGWCCG 1 cut(s) 101
SacI GAGCTC 2 cut(s) 3825, 4654
SacII CCGCGG 1 cut(s) 5879
SapI GCTCTTC 1 cut(s) 3954
ScaI AGTACT 2 cut(s) 2997, 5032
SfcI CTRYAG 7 cut(s) 735, 1494, 2409, 2867, 3846, 5083, 5863
Sfr274I CTCGAG 1 cut(s) 2991
Sfr303I CCGCGG 1 cut(s) 5879
SfuI TTCGAA 1 cut(s) 4747
SgrBI CCGCGG 1 cut(s) 5879
SinI GGWCC 5 cut(s) 101, 1154, 1907, 2204, 3539
SlaI CTCGAG 1 cut(s) 2991
SmiMI CAYNNNNRTG 7 cut(s) 986, 1133, 1613, 2094, 2184, 2484, 3279
SmlI CTYRAG 9 cut(s) 692, 834, 1370, 2644, 2828, 2991, 3325, 4628, 4884
SmoI CTYRAG 9 cut(s) 692, 834, 1370, 2644, 2828, 2991, 3325, 4628, 4884
SpeI ACTAGT 1 cut(s) 245
SphI GCATGC 2 cut(s) 4344, 5474
SseBI AGGCCT 1 cut(s) 2757
SspI AATATT 2 cut(s) 1252, 3271
SspMI CTAG 9 cut(s) 246, 378, 593, 2468, 2679, 3942, 5495, 5772, 5908
SstI GAGCTC 2 cut(s) 3825, 4654
StuI AGGCCT 1 cut(s) 2757
StyI CCWWGG 1 cut(s) 5120
TatI WGTACW 4 cut(s) 2325, 2995, 3412, 5030
TauI GCSGC 5 cut(s) 16, 2048, 3116, 5157, 5878
TspGWI ACGGA 8 cut(s) 276, 809, 1443, 2261, 2518, 2531, 3802, 4317
Tth111I GACNNNGTC 1 cut(s) 2268
Van91I CCANNNNNTGG 5 cut(s) 3338, 3548, 4059, 4850, 5543
VneI GTGCAC 1 cut(s) 264
VpaK11BI GGWCC 5 cut(s) 101, 1154, 1907, 2204, 3539
VspI ATTAAT 2 cut(s) 2885, 3315
XapI RAATTY 9 cut(s) 685, 1276, 2146, 3359, 3432, 3492, 4034, 4476, 4794
XceI RCATGY 7 cut(s) 28, 1917, 2483, 3284, 4344, 4607, 5474
XcmI CCANNNNNNNNNTGG 3 cut(s) 176, 864, 5314
XhoI CTCGAG 1 cut(s) 2991
XmiI GTMKAC 4 cut(s) 1046, 2866, 3138, 4494
XmnI GAANNNNTTC 5 cut(s) 1080, 1142, 3006, 3930, 5903
XspI CTAG 9 cut(s) 246, 378, 593, 2468, 2679, 3942, 5495, 5772, 5908
ZraI GACGTC 1 cut(s) 118
ZrmI AGTACT 2 cut(s) 2997, 5032
Zsp2I ATGCAT 5 cut(s) 1789, 1897, 3600, 4081, 4346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.