Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005148

Physical Location & Seq

Genomic Coordinates Forward (+)

2076565 .. 2079329

Gene Structure 2765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGTTACATTTAGTGGATGCATACAGAAAGACCTTTCATGATAAGTCATGCGGGGTATCAAAGTTCTTGCAGATCCAAAGATGTAACTTTTCCCTATCTCCAATTACCGAGAACTCAAGGACCGTAAGAACAATCACTTCATCAAGCTTGAGAGATGGTTCCACTAAGTTTTTTGATTTTGCTGTTATTGGTAGTGGAGTTGCCGGGCTCCGCTATGCCCTTGAAGTGGCAAAACATGGATCCGTTGCTGTGATTACCAAGGCTGAACCTCATGAGAGCAATACAAACTATGCTCAAGGTGGCGTTAGTGCTGTTCTTTCCCAATCGGATTCTGTGGAGAGTCATATGCAGGACACCATTGTAGCAGGGGCTTATCTCTGTGACGAGGAGACTGTCAGGGTTGTCTGTACCGAAGGACCTGAGAGAATTAGGGAACTGATTGCAATGGGGGCATCCTTTGATCATGGGGAAGATGGAAACTTGCACCTAGCGAGAGAGGGAGGTCACTCCCATCGCAGGATTGTTCATGCTGCTGATATGACTGGAAAGGAGATTGAACGGGCTCTGTTGAAGGCAGTTCTTAAGGATCCTAATATCTTCATGTTTGAACACCATCTTGCGATAGATTTGCTTACTTGCCAGGATGGTTCTGATACAGTTTGTCTTGGCGTTGACACTTTAAATACAGAAACACAAGAGGTGATACGGTTTATCTCAAAGGTGACTTTACTTGCGTCAGGTGGGGCTGGACAAATCTATCCGACAACTACAAATCCTCCGGTAGCCACAGGGGATGGAATTGCAATGGCCCATCGAGCTCAAGCTGTGATATCCAACATGGAATTTGTTCAGTTCCATCCAACGGCGTTAGCCGATGAAGGCCTTCCCATCCAACCATCCAAGGCTCGAGAAAATGCATTTCTCATCACTGAAGCTGTCAGGGGTGATGGGGGCATCCTGTACAATCTAGACATGGAAAGGTTTATGCCACTCTATGATGAACGAGCAGAACTTGCTCCGAGGGATGTGGTGGCCAGAGGCATAGACGACCAGCTTAAAAAGCGAAATGAAAAGTACGTGCTACTTGATATAAGTCACAAGCCCAGAGAAAAAATCCTCTCACACTTCCCCAACATAGCAGCTGAGTGCCTTAAGTACGGCTTGGACATAACTTGCCAGCCAATTCCCGTTGTTCCTGCCGCTCACTATATGTGTGGGGGAGTCCGTGCTGGACTCCAGGGAGAGACAAATGTGCAGGGCCTGTATGTGGCAGGCGAAGTTGCTTGCACCGGTTTGCATGGGGCCAACCGTCTTGCTAGTAACTCATTGCTTGAAGCACTAGTTTTCGCACGAAGAGCAGTCCAGCCCTCAATTGAACACATGAAGTGCTCTAGCCTCGACTTCAGCGCTTCAGATTGGTGGGCCAGACCAGTCGTGCCTGTCTCACTCAAGAGCAATGCCATCGAAAAAATTTTGGCAATGACAAGGGAAGTAAGAAAAGAAGTGCAATCGATCATGTGGAAGTATGTTGGAATTGTACGTTCTACAACGAGGCTTGAAACAGCAAAGCAAAAGATTTGTGATCTGGAGGATAAGTGGGAAGACAACTTATTTGAGATGGGATGGGAACCAACAATGGTGGGGCTTGAGATTTGCGAAATGAGTAACTTCTTCTGTTGTGCAAAACTGGTGGTGAGCAGCGCTCTTGCTAGGCATGAGAGCGGCACACTTGATTACGCCATCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00250 ko00760 ko01100 map00250 map00760 map01100

Pfam Domains

Protein Families

FAD_binding_2 Succ_DH_flav_C

Protein Analysis

583

Amino Acids

63.96

Weight (kDa)

5.76

Isoelectric Point (pI)

37.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_2	PF00890	59 - 443	2e-90	FAD binding domain
DAO	PF01266	59 - 167	4.1e-08	FAD dependent oxidoreductase
Succ_DH_flav_C	PF02910	499 - 574	4.5e-10	Fumarate reductase flavoprotein C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14760
fragaria_vesca	FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750
malus_domestica	MD09G1032700.v1.1 MD17G1034300.v1.1
prunus_persica	Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1
pyrus_communis	pycom111g02610 pycom17g03170
rosa_chinensis	RchiOBHm_Chr2g0171691
rosa_laevigata	RLG00000022029
rosa_multiflora	Rmu_ssc0000252.1_g000010
rosa_roxburghii	Rroxscaffold_2G00080520
rosa_rugosa	Rorug02G0555400
rosa_samantha	Rh2AG630400 Rh2BG640900 Rh2BG643400 Rh2CG609100 Rh2DG651800
rosa_wichuraiana	Rw2G052170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	1202, 1722
AciI	CCGC	4 cut(s)	51, 211, 1200, 1722
AclWI	GGATC	5 cut(s)	67, 234, 247, 581, 594
AcoI	YGGCCR	1 cut(s)	1032
AcsI	RAATTY	2 cut(s)	842, 1470
AcuI	CTGAAG	3 cut(s)	951, 1387, 1395
AfaI	GTAC	5 cut(s)	409, 962, 1076, 1157, 1539
AfeI	AGCGCT	2 cut(s)	1408, 1702
AfiI	CCNNNNNNNGG	4 cut(s)	226, 516, 862, 1267
AflII	CTTAAG	2 cut(s)	581, 1151
AgeI	ACCGGT	1 cut(s)	1289
AgsI	TTSAA	7 cut(s)	224, 557, 571, 608, 1334, 1376, 1559
AhlI	ACTAGT	1 cut(s)	1339
AjnI	CCWGG	2 cut(s)	639, 1236
AluBI	AGCT	6 cut(s)	147, 818, 824, 935, 1054, 1142
AluI	AGCT	6 cut(s)	147, 818, 824, 935, 1054, 1142
Alw21I	GWGCWC	2 cut(s)	820, 1391
Alw26I	GTCTC	3 cut(s)	383, 1238, 1447
AlwI	GGATC	5 cut(s)	67, 234, 247, 581, 594
AlwNI	CAGNNNCTG	1 cut(s)	1261
Ama87I	CYCGRG	1 cut(s)	906
Aor51HI	AGCGCT	2 cut(s)	1408, 1702
AoxI	GGCC	6 cut(s)	807, 880, 1032, 1258, 1302, 1422
ApeKI	GCWGC	3 cut(s)	530, 1139, 1698
ApoI	RAATTY	2 cut(s)	842, 1470
ArsI	GACNNNNNNTTYG	2 cut(s)	1595, 1627
AsiGI	ACCGGT	1 cut(s)	1289
Asp700I	GAANNNNTTC	2 cut(s)	846, 882
AspLEI	GCGC	2 cut(s)	1409, 1703
AspS9I	GGNCC	6 cut(s)	120, 416, 808, 1258, 1302, 1422
AsuC2I	CCSGG	1 cut(s)	205
AsuHPI	GGTGA	4 cut(s)	712, 733, 956, 1705
AvaI	CYCGRG	1 cut(s)	906
AvaII	GGWCC	2 cut(s)	120, 416
BalI	TGGCCA	1 cut(s)	1034
BamHI	GGATCC	2 cut(s)	239, 586
BanII	GRGCYC	3 cut(s)	210, 565, 820
BbsI	GAAGAC	1 cut(s)	1608
Bbv12I	GWGCWC	2 cut(s)	820, 1391
BbvI	GCAGC	3 cut(s)	517, 1151, 1710
BceAI	ACGGC	2 cut(s)	879, 1174
BcgI	CGANNNNNNTGC	4 cut(s)	610, 644, 1444, 1478
BciT130I	CCWGG	2 cut(s)	641, 1238
BclI	TGATCA	1 cut(s)	460
BcnI	CCSGG	1 cut(s)	205
BcoDI	GTCTC	3 cut(s)	383, 1238, 1447
BcuI	ACTAGT	1 cut(s)	1339
BfaI	CTAG	6 cut(s)	488, 968, 1317, 1340, 1392, 1710
BfoI	RGCGCY	2 cut(s)	1410, 1704
BfrI	CTTAAG	2 cut(s)	581, 1151
BisI	GCNGC	5 cut(s)	531, 1140, 1200, 1699, 1723
BlsI	GCNGC	5 cut(s)	532, 1141, 1201, 1700, 1724
Bme1390I	CCNGG	3 cut(s)	205, 641, 1238
Bme18I	GGWCC	2 cut(s)	120, 416
BmeT110I	CYCGRG	1 cut(s)	906
BmgT120I	GGNCC	6 cut(s)	120, 416, 808, 1258, 1302, 1422
BmiI	GGNNCC	6 cut(s)	160, 209, 241, 588, 1303, 1629
BmrFI	CCNGG	3 cut(s)	205, 641, 1238
BmsI	GCATC	3 cut(s)	7, 461, 963
BpiI	GAAGAC	1 cut(s)	1608
BplI	GAGNNNNNCTC	2 cut(s)	1687, 1719
BpmI	CTGGAG	2 cut(s)	1220, 1607
BpuEI	CTTGAG	6 cut(s)	100, 169, 279, 804, 1433, 1667
BpuMI	CCSGG	1 cut(s)	205
Bsa29I	ATCGAT	2 cut(s)	1511, 1743
BsaAI	YACGTR	1 cut(s)	1078
BsaJI	CCNNGG	4 cut(s)	258, 900, 1019, 1237
BsaWI	WCCGGW	2 cut(s)	778, 1289
BsaXI	ACNNNNNCTCC	4 cut(s)	760, 790, 1580, 1610
Bsc4I	CCNNNNNNNGG	4 cut(s)	226, 516, 862, 1267
Bse118I	RCCGGY	1 cut(s)	1289
Bse1I	ACTGG	3 cut(s)	547, 1430, 1692
Bse3DI	GCAATG	5 cut(s)	450, 810, 1325, 1462, 1485
BseBI	CCWGG	2 cut(s)	641, 1238
BseCI	ATCGAT	2 cut(s)	1511, 1743
BseDI	CCNNGG	4 cut(s)	258, 900, 1019, 1237
BseLI	CCNNNNNNNGG	4 cut(s)	226, 516, 862, 1267
BseMI	GCAATG	5 cut(s)	450, 810, 1325, 1462, 1485
BseMII	CTCAG	2 cut(s)	411, 1134
BseNI	ACTGG	3 cut(s)	547, 1430, 1692
BseRI	GAGGAG	1 cut(s)	401
BseXI	GCAGC	3 cut(s)	517, 1151, 1710
BsgI	GTGCAG	1 cut(s)	1274
BshFI	GGCC	6 cut(s)	809, 882, 1034, 1260, 1304, 1424
BshTI	ACCGGT	1 cut(s)	1289
BshVI	ATCGAT	2 cut(s)	1511, 1743
BsiHKAI	GWGCWC	2 cut(s)	820, 1391
BsiHKCI	CYCGRG	1 cut(s)	906
BsiSI	CCGG	3 cut(s)	204, 779, 1290
BslI	CCNNNNNNNGG	4 cut(s)	226, 516, 862, 1267
BsmAI	GTCTC	3 cut(s)	383, 1238, 1447
BsnI	GGCC	6 cut(s)	809, 882, 1034, 1260, 1304, 1424
BsoBI	CYCGRG	1 cut(s)	906
Bsp1286I	GDGCHC	4 cut(s)	210, 565, 820, 1391
Bsp1407I	TGTACA	1 cut(s)	960
Bsp143I	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
BspACI	CCGC	4 cut(s)	51, 211, 1200, 1722
BspANI	GGCC	6 cut(s)	809, 882, 1034, 1260, 1304, 1424
BspCNI	CTCAG	2 cut(s)	412, 1135
BspDI	ATCGAT	2 cut(s)	1511, 1743
BspHI	TCATGA	2 cut(s)	37, 271
BspLI	GGNNCC	6 cut(s)	160, 209, 241, 588, 1303, 1629
BspPI	GGATC	5 cut(s)	67, 234, 247, 581, 594
BspQI	GCTCTTC	1 cut(s)	1348
BspTI	CTTAAG	2 cut(s)	581, 1151
BsrBI	CCGCTC	2 cut(s)	1202, 1722
BsrDI	GCAATG	5 cut(s)	450, 810, 1325, 1462, 1485
BsrFI	RCCGGY	1 cut(s)	1289
BsrGI	TGTACA	1 cut(s)	960
BsrI	ACTGG	3 cut(s)	547, 1430, 1692
BssAI	RCCGGY	1 cut(s)	1289
BssECI	CCNNGG	4 cut(s)	258, 900, 1019, 1237
BssMI	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
BssT1I	CCWWGG	2 cut(s)	258, 900
Bst2UI	CCWGG	2 cut(s)	641, 1238
Bst4CI	ACNGT	5 cut(s)	124, 394, 658, 708, 1310
Bst6I	CTCTTC	1 cut(s)	1348
BstAFI	CTTAAG	2 cut(s)	581, 1151
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstAUI	TGTACA	1 cut(s)	960
BstBAI	YACGTR	1 cut(s)	1078
BstC8I	GCNNGC	3 cut(s)	1178, 1273, 1285
BstDEI	CTNAG	3 cut(s)	165, 420, 1143
BstH2I	RGCGCY	2 cut(s)	1410, 1704
BstHHI	GCGC	2 cut(s)	1409, 1703
BstKTI	GATC	6 cut(s)	75, 242, 463, 589, 1515, 1585
BstMAI	GTCTC	3 cut(s)	383, 1238, 1447
BstMBI	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
BstMWI	GCNNNNNNNGC	5 cut(s)	449, 815, 1013, 1060, 1355
BstNI	CCWGG	2 cut(s)	641, 1238
BstSCI	CCNGG	3 cut(s)	203, 639, 1236
BstV1I	GCAGC	3 cut(s)	517, 1151, 1710
BstV2I	GAAGAC	1 cut(s)	1608
BstX2I	RGATCY	3 cut(s)	72, 239, 586
BstYI	RGATCY	3 cut(s)	72, 239, 586
Bsu15I	ATCGAT	2 cut(s)	1511, 1743
BsuRI	GGCC	6 cut(s)	809, 882, 1034, 1260, 1304, 1424
BsuTUI	ATCGAT	2 cut(s)	1511, 1743
BtgZI	GCGATG	1 cut(s)	497
BtsIMutI	CAGTG	1 cut(s)	927
Cac8I	GCNNGC	3 cut(s)	1178, 1273, 1285
CaiI	CAGNNNCTG	1 cut(s)	1261
CciI	TCATGA	2 cut(s)	37, 271
CfoI	GCGC	2 cut(s)	1409, 1703
Cfr10I	RCCGGY	1 cut(s)	1289
Cfr13I	GGNCC	6 cut(s)	120, 416, 808, 1258, 1302, 1422
ClaI	ATCGAT	2 cut(s)	1511, 1743
CseI	GACGC	1 cut(s)	723
Csp6I	GTAC	5 cut(s)	408, 961, 1075, 1156, 1538
CspAI	ACCGGT	1 cut(s)	1289
CspCI	CAANNNNNGTGG	4 cut(s)	1620, 1655, 1671, 1706
CviQI	GTAC	5 cut(s)	408, 961, 1075, 1156, 1538
DdeI	CTNAG	3 cut(s)	165, 420, 1143
DpnI	GATC	6 cut(s)	74, 241, 462, 588, 1514, 1584
DpnII	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
DraI	TTTAAA	1 cut(s)	681
EaeI	YGGCCR	1 cut(s)	1032
Eam1104I	CTCTTC	1 cut(s)	1348
EarI	CTCTTC	1 cut(s)	1348
Ecl136II	GAGCTC	1 cut(s)	818
Eco130I	CCWWGG	2 cut(s)	258, 900
Eco147I	AGGCCT	1 cut(s)	882
Eco24I	GRGCYC	3 cut(s)	210, 565, 820
Eco32I	GATATC	1 cut(s)	831
Eco47I	GGWCC	2 cut(s)	120, 416
Eco47III	AGCGCT	2 cut(s)	1408, 1702
Eco53kI	GAGCTC	1 cut(s)	818
Eco57I	CTGAAG	3 cut(s)	951, 1387, 1395
Eco88I	CYCGRG	1 cut(s)	906
EcoICRI	GAGCTC	1 cut(s)	818
EcoO109I	RGGNCCY	2 cut(s)	416, 1258
EcoRII	CCWGG	2 cut(s)	639, 1236
EcoRV	GATATC	1 cut(s)	831
EcoT14I	CCWWGG	2 cut(s)	258, 900
EcoT22I	ATGCAT	2 cut(s)	22, 919
EcoT38I	GRGCYC	3 cut(s)	210, 565, 820
ErhI	CCWWGG	2 cut(s)	258, 900
FalI	AAGNNNNNCTT	2 cut(s)	1145, 1177
FauI	CCCGC	1 cut(s)	44
FauNDI	CATATG	1 cut(s)	345
FbaI	TGATCA	1 cut(s)	460
Fnu4HI	GCNGC	5 cut(s)	531, 1140, 1200, 1699, 1723
FriOI	GRGCYC	3 cut(s)	210, 565, 820
Fsp4HI	GCNGC	5 cut(s)	531, 1140, 1200, 1699, 1723
FspBI	CTAG	6 cut(s)	488, 968, 1317, 1340, 1392, 1710
GlaI	GCGC	2 cut(s)	1408, 1702
GluI	GCNGC	5 cut(s)	531, 1140, 1200, 1699, 1723
GsuI	CTGGAG	2 cut(s)	1220, 1607
HaeII	RGCGCY	2 cut(s)	1410, 1704
HaeIII	GGCC	6 cut(s)	809, 882, 1034, 1260, 1304, 1424
HapII	CCGG	3 cut(s)	204, 779, 1290
HgaI	GACGC	1 cut(s)	723
HhaI	GCGC	2 cut(s)	1409, 1703
Hin6I	GCGC	2 cut(s)	1407, 1701
HinP1I	GCGC	2 cut(s)	1407, 1701
HincII	GTYRAC	1 cut(s)	673
HindII	GTYRAC	1 cut(s)	673
HindIII	AAGCTT	1 cut(s)	145
HinfI	GANTC	4 cut(s)	329, 340, 1221, 1233
HpaII	CCGG	3 cut(s)	204, 779, 1290
HphI	GGTGA	4 cut(s)	712, 733, 956, 1705
Hpy166II	GTNNAC	1 cut(s)	673
Hpy188I	TCNGA	5 cut(s)	328, 652, 762, 1020, 1414
Hpy188III	TCNNGA	6 cut(s)	38, 272, 908, 968, 1450, 1586
Hpy8I	GTNNAC	1 cut(s)	673
HpyAV	CCTTC	4 cut(s)	407, 565, 872, 893
HpyCH4III	ACNGT	5 cut(s)	124, 394, 658, 708, 1310
HpyCH4IV	ACGT	2 cut(s)	1077, 1540
HpyF10VI	GCNNNNNNNGC	5 cut(s)	449, 815, 1013, 1060, 1355
HpyF3I	CTNAG	3 cut(s)	165, 420, 1143
HpySE526I	ACGT	2 cut(s)	1077, 1540
HspAI	GCGC	2 cut(s)	1407, 1701
Ksp22I	TGATCA	1 cut(s)	460
Kzo9I	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
LguI	GCTCTTC	1 cut(s)	1348
LmnI	GCTCC	2 cut(s)	213, 1021
Lsp1109I	GCAGC	3 cut(s)	517, 1151, 1710
LweI	GCATC	3 cut(s)	7, 461, 963
MaeI	CTAG	6 cut(s)	488, 968, 1317, 1340, 1392, 1710
MaeII	ACGT	2 cut(s)	1077, 1540
MaeIII	GTNAC	8 cut(s)	3, 83, 380, 503, 721, 1094, 1319, 1664
MalI	GATC	6 cut(s)	74, 241, 462, 588, 1514, 1584
MbiI	CCGCTC	2 cut(s)	1202, 1722
MboI	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
MboII	GAAGA	5 cut(s)	482, 589, 1365, 1613, 1663
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	3 cut(s)	72, 239, 586
MhlI	GDGCHC	4 cut(s)	210, 565, 820, 1391
MlsI	TGGCCA	1 cut(s)	1034
MluCI	AATT	8 cut(s)	102, 426, 798, 842, 1182, 1371, 1470, 1533
MluNI	TGGCCA	1 cut(s)	1034
MlyI	GAGTC	3 cut(s)	349, 1227, 1230
MmeI	TCCRAC	5 cut(s)	785, 858, 884, 916, 1510
Mox20I	TGGCCA	1 cut(s)	1034
Mph1103I	ATGCAT	2 cut(s)	22, 919
MroXI	GAANNNNTTC	2 cut(s)	846, 882
MscI	TGGCCA	1 cut(s)	1034
MseI	TTAA	4 cut(s)	582, 680, 1056, 1152
Msp20I	TGGCCA	1 cut(s)	1034
MspA1I	CMGCKG	1 cut(s)	1142
MspCI	CTTAAG	2 cut(s)	581, 1151
MspI	CCGG	3 cut(s)	204, 779, 1290
MspR9I	CCNGG	3 cut(s)	205, 641, 1238
MunI	CAATTG	1 cut(s)	1371
MvaI	CCWGG	2 cut(s)	641, 1238
MwoI	GCNNNNNNNGC	5 cut(s)	449, 815, 1013, 1060, 1355
NciI	CCSGG	1 cut(s)	205
NdeI	CATATG	1 cut(s)	345
NdeII	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
NlaIV	GGNNCC	6 cut(s)	160, 209, 241, 588, 1303, 1629
NmuCI	GTSAC	4 cut(s)	380, 503, 721, 1094
NsiI	ATGCAT	2 cut(s)	22, 919
PaeR7I	CTCGAG	1 cut(s)	906
PagI	TCATGA	2 cut(s)	37, 271
PceI	AGGCCT	1 cut(s)	882
PciSI	GCTCTTC	1 cut(s)	1348
PdmI	GAANNNNTTC	2 cut(s)	846, 882
PfeI	GAWTC	1 cut(s)	329
PinAI	ACCGGT	1 cut(s)	1289
PkrI	GCNGC	5 cut(s)	532, 1141, 1201, 1700, 1724
PleI	GAGTC	3 cut(s)	348, 1227, 1229
PpsI	GAGTC	3 cut(s)	348, 1227, 1229
Ppu21I	YACGTR	1 cut(s)	1078
PpuMI	RGGWCCY	1 cut(s)	416
Psp124BI	GAGCTC	1 cut(s)	820
Psp5II	RGGWCCY	1 cut(s)	416
Psp6I	CCWGG	2 cut(s)	639, 1236
PspGI	CCWGG	2 cut(s)	639, 1236
PspN4I	GGNNCC	6 cut(s)	160, 209, 241, 588, 1303, 1629
PspPI	GGNCC	6 cut(s)	120, 416, 808, 1258, 1302, 1422
PspPPI	RGGWCCY	1 cut(s)	416
PstNI	CAGNNNCTG	1 cut(s)	1261
PsuI	RGATCY	3 cut(s)	72, 239, 586
PvuII	CAGCTG	1 cut(s)	1142
RsaI	GTAC	5 cut(s)	409, 962, 1076, 1157, 1539
RsaNI	GTAC	5 cut(s)	408, 961, 1075, 1156, 1538
SacI	GAGCTC	1 cut(s)	820
SapI	GCTCTTC	1 cut(s)	1348
SaqAI	TTAA	4 cut(s)	582, 680, 1056, 1152
SatI	GCNGC	5 cut(s)	531, 1140, 1200, 1699, 1723
Sau3AI	GATC	6 cut(s)	72, 239, 460, 586, 1512, 1582
Sau96I	GGNCC	6 cut(s)	120, 416, 808, 1258, 1302, 1422
SchI	GAGTC	3 cut(s)	349, 1227, 1230
ScrFI	CCNGG	3 cut(s)	205, 641, 1238
SduI	GDGCHC	4 cut(s)	210, 565, 820, 1391
SfaNI	GCATC	3 cut(s)	7, 461, 963
Sfr274I	CTCGAG	1 cut(s)	906
SinI	GGWCC	2 cut(s)	120, 416
SlaI	CTCGAG	1 cut(s)	906
SmlI	CTYRAG	9 cut(s)	115, 148, 294, 581, 819, 906, 1151, 1448, 1646
SmoI	CTYRAG	9 cut(s)	115, 148, 294, 581, 819, 906, 1151, 1448, 1646
SpeI	ACTAGT	1 cut(s)	1339
Sse9I	AATT	8 cut(s)	102, 426, 798, 842, 1182, 1371, 1470, 1533
SseBI	AGGCCT	1 cut(s)	882
SsiI	CCGC	4 cut(s)	51, 211, 1200, 1722
SspMI	CTAG	6 cut(s)	488, 968, 1317, 1340, 1392, 1710
SstI	GAGCTC	1 cut(s)	820
StuI	AGGCCT	1 cut(s)	882
StyD4I	CCNGG	3 cut(s)	203, 639, 1236
StyI	CCWWGG	2 cut(s)	258, 900
TaaI	ACNGT	5 cut(s)	124, 394, 658, 708, 1310
TaiI	ACGT	2 cut(s)	1080, 1543
TaqI	TCGA	6 cut(s)	814, 907, 1398, 1464, 1511, 1743
TasI	AATT	8 cut(s)	102, 426, 798, 842, 1182, 1371, 1470, 1533
TatI	WGTACW	1 cut(s)	960
TauI	GCSGC	2 cut(s)	1202, 1725
TfiI	GAWTC	1 cut(s)	329
Tru1I	TTAA	4 cut(s)	582, 680, 1056, 1152
Tru9I	TTAA	4 cut(s)	582, 680, 1056, 1152
TscAI	CASTG	1 cut(s)	934
TseFI	GTSAC	4 cut(s)	380, 503, 721, 1094
TseI	GCWGC	3 cut(s)	530, 1139, 1698
Tsp45I	GTSAC	4 cut(s)	380, 503, 721, 1094
TspDTI	ATGAA	8 cut(s)	26, 129, 515, 589, 891, 1014, 1083, 1397
TspGWI	ACGGA	2 cut(s)	232, 1214
TspRI	CASTG	1 cut(s)	934
Vha464I	CTTAAG	2 cut(s)	581, 1151
VpaK11BI	GGWCC	2 cut(s)	120, 416
XapI	RAATTY	2 cut(s)	842, 1470
XbaI	TCTAGA	1 cut(s)	967
XhoI	CTCGAG	1 cut(s)	906
XmnI	GAANNNNTTC	2 cut(s)	846, 882
XspI	CTAG	6 cut(s)	488, 968, 1317, 1340, 1392, 1710
Zsp2I	ATGCAT	2 cut(s)	22, 919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.