Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005148

Physical Location & Seq

Genomic Coordinates Forward (+)

3493644 .. 3498227

Gene Structure 4584 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00080520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGACAACTTGTATACCAGCTGGAACTGGTAAACTGCATTTCAGAGTAAGGGACTTCAACGCACAAGGCTGTAGAAAGGCTTCTTGGGTCACATTTAGTGAGCTTTCATGGTCGCGTGGGGTTTCAAAGTTCTTGCAAATTCAGAGATGTAACTCCTCCCAATCTCCAATTAATGAGAGCTCAAAGCCCTTAAGAACCATCACTTCATCAAGCTTGCGAGACGGTTCCACTAAATTTTTCGATTTTACTGTTATTGGTAGTGGAGTTGCTGGCCTACGCTATGCCCTGGAAGTGGCAAAACATGGATCTGTTGCTGTCATTACCAAGGCTGAGCCTCATGAAAGTAATACAAATTATGCTCAAGGTGGTGTTAGTGCTGTACTGTGCCCTTCGGATTCTGTGGAGAGTCATGTCCAGGACACCATTGTAGCAGGAGCTTATCTATGTGATGAGGAGACTGTCAGAAGAGGGGGTCACTCTCATCACAGAATTGTTCATGCTGCTGATGTGACGGGAAGGGAGATTGAACGGGCACTGTTGGAGGCAGTTATTAAGGATCCTAATATCTTCATGTTTCAACACCATTTTGCTATAGATTTGCTAACTTCTCAGGACGGTTCTGAGACAGTTTGCCTGGGTGTTGACACTTTGAATACAGAGACACTTGAGGTGATACGTTTTATTTCAAAGGTGACCTTACTAGCATCAGGTGGGGCTGGACAAATCTATCCAACCACTACAAATCCTCCGGTAGCCACTGGAGATGGAATTGCAATGGCTCATCGAGCTCAAGCTGTGGTCTCCAACATGGAATTTGTTCAGTTCCACCCCACGGCTTTGGCTGATGAAGGCCTCCCTGTCAAATCTACCAAGGCTCGAGGAAATGCATTTCTCATCACTGAAGCTGTCAGGGGTGATGGTGGCATTCTGTACAATTTAGACATGGAAAGGTTCATGCCACTGTATGATGAACGAGCAGAACTTGCTACCAGGGATGTGGTAGCTAGAAGCATAGATGACCAGCTTAAAAAGCGTAATGAGAAGTATGTGCTACTTGATATAAGTCACAAGCCGAGGGACAAAATTCTATCACACTTCCCTAATATTGCCGCTGAGTGCCTTAGAGGTGGCTTGGATATAACTCGCCAGCCAATTCCTGTGGTTCCTGCAGCTCATTATATGTGTGGGGGTGTCCGTGCTGGACTCCAGGGAGAGACGAATGTGCAGGGCCTTTATGTGGCAGGCGAAGTTGCTTGCACAGGTTTGCATGGAGCTAACCGTCTTGCTAGTAACTCATTGCTTGAAGCTCTGGTTTTTGCACGAAGAGCAGTCCAGCCCTCCATTGATCACATGAAGAACTCTAGCCTTGACTTCAGTGCTTCAAATTGGTGGTCCAGACCAGTTGTGCCTATGTCACTTGAGAGCAATGTCATCAACAAAATTTTGACCATGACCAGGAAAGTAAGAAAAGAATTGCAATCAATCATGTGGAACTATGTTGGAATTGTTCGTTCTACAACAAGGCTTGAGGCAGCAGAACAAAAGATTCATGATCTTGAGGCAAAATGGGAGGACTACTTATTCCGGTTGGGATGGGAACCCACAATGGTGGGGCTTGAGGCTTGTGAAATGAGAAACTTCTTTTGTTGTGCGAAGATGGTGGTGAGCAGTGCCCTTGCTAGACATGAGAGCCGTGGTCTTCACTACACGATTGATTTTCCTCATGTTGAAGAAAGTGAGAGGCTGCCAACAATAATATTCCCTTGTTCGTCTGTAAAGAGTACATGGAGTTCACGACAACTACACAATCAGCCAATGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00250 ko00760 ko01100 map00250 map00760 map01100

Pfam Domains

Protein Families

FAD_binding_2 Succ_DH_flav_C

Protein Analysis

607

Amino Acids

67.0

Weight (kDa)

7.08

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_2	PF00890	82 - 154	2.2e-15	FAD binding domain
FAD_binding_2	PF00890	155 - 433	3.5e-57	FAD binding domain
Succ_DH_flav_C	PF02910	489 - 577	6.5e-17	Fumarate reductase flavoprotein C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14760
fragaria_vesca	FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750
malus_domestica	MD09G1032700.v1.1 MD17G1034300.v1.1
prunus_persica	Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1
pyrus_communis	pycom111g02610 pycom17g03170
rosa_chinensis	RchiOBHm_Chr2g0171691
rosa_laevigata	RLG00000022029
rosa_multiflora	Rmu_ssc0000252.1_g000010
rosa_roxburghii	Rroxscaffold_2G00080520
rosa_rugosa	Rorug02G0555400
rosa_samantha	Rh2AG630400 Rh2BG640900 Rh2BG643400 Rh2CG609100 Rh2DG651800
rosa_wichuraiana	Rw2G052170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	13
AccII	CGCG	1 cut(s)	115
AciI	CCGC	1 cut(s)	1110
AclWI	GGATC	3 cut(s)	313, 551, 564
AcsI	RAATTY	5 cut(s)	138, 233, 812, 1083, 1440
AcuI	CTGAAG	2 cut(s)	921, 1357
AfaI	GTAC	3 cut(s)	381, 932, 1783
AfiI	CCNNNNNNNGG	4 cut(s)	292, 832, 1237, 1455
AflII	CTTAAG	1 cut(s)	190
AgsI	TTSAA	9 cut(s)	58, 126, 527, 578, 652, 687, 1304, 1383, 1730
AjnI	CCWGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
AjuI	GAANNNNNNNTTGG	2 cut(s)	67, 99
AleI	CACNNNNGTG	1 cut(s)	1607
Alw21I	GWGCWC	2 cut(s)	182, 790
Alw26I	GTCTC	6 cut(s)	213, 449, 617, 653, 805, 1208
AlwI	GGATC	3 cut(s)	313, 551, 564
Ama87I	CYCGRG	1 cut(s)	876
AoxI	GGCC	3 cut(s)	271, 850, 1228
ApeKI	GCWGC	4 cut(s)	500, 1169, 1532, 1744
ApoI	RAATTY	5 cut(s)	138, 233, 812, 1083, 1440
ArsI	GACNNNNNNTTYG	2 cut(s)	1376, 1408
AseI	ATTAAT	1 cut(s)	171
Asp700I	GAANNNNTTC	2 cut(s)	79, 816
AspS9I	GGNCC	2 cut(s)	1228, 1392
AsuHPI	GGTGA	4 cut(s)	682, 703, 926, 1675
AvaI	CYCGRG	1 cut(s)	876
AvaII	GGWCC	1 cut(s)	1392
BaeGI	GKGCMC	3 cut(s)	389, 535, 1675
BamHI	GGATCC	1 cut(s)	556
BanII	GRGCYC	2 cut(s)	182, 790
BarI	GAAGNNNNNNTAC	2 cut(s)	64, 96
BbsI	GAAGAC	1 cut(s)	1691
Bbv12I	GWGCWC	2 cut(s)	182, 790
BbvI	GCAGC	4 cut(s)	487, 1181, 1544, 1731
BccI	CCATC	5 cut(s)	206, 758, 911, 1587, 1651
BceAI	ACGGC	2 cut(s)	849, 1677
BciT130I	CCWGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
BclI	TGATCA	1 cut(s)	1345
BcoDI	GTCTC	6 cut(s)	213, 449, 617, 653, 805, 1208
BfaI	CTAG	5 cut(s)	701, 1005, 1287, 1362, 1680
BfmI	CTRYAG	3 cut(s)	70, 591, 1167
BfrI	CTTAAG	1 cut(s)	190
BisI	GCNGC	5 cut(s)	501, 1110, 1170, 1533, 1745
BlpI	GCTNAGC	1 cut(s)	330
BlsI	GCNGC	5 cut(s)	502, 1111, 1171, 1534, 1746
Bme1390I	CCNGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
Bme18I	GGWCC	1 cut(s)	1392
BmeT110I	CYCGRG	1 cut(s)	876
BmgT120I	GGNCC	2 cut(s)	1228, 1392
BmiI	GGNNCC	4 cut(s)	226, 558, 1164, 1599
BmrFI	CCNGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
BmsI	GCATC	1 cut(s)	713
BpiI	GAAGAC	1 cut(s)	1691
BpmI	CTGGAG	2 cut(s)	780, 1190
Bpu1102I	GCTNAGC	1 cut(s)	330
BpuEI	CTTGAG	7 cut(s)	345, 686, 774, 1439, 1547, 1577, 1637
BsaI	GGTCTC	1 cut(s)	805
BsaJI	CCNNGG	9 cut(s)	285, 324, 634, 831, 870, 990, 1073, 1207, 1693
BsaWI	WCCGGW	2 cut(s)	748, 1584
BsaXI	ACNNNNNCTCC	2 cut(s)	730, 760
Bsc4I	CCNNNNNNNGG	4 cut(s)	292, 832, 1237, 1455
Bse1I	ACTGG	3 cut(s)	31, 763, 1400
Bse3DI	GCAATG	3 cut(s)	780, 1295, 1432
BseBI	CCWGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
BseDI	CCNNGG	9 cut(s)	285, 324, 634, 831, 870, 990, 1073, 1207, 1693
BseGI	GGATG	2 cut(s)	1000, 1598
BseLI	CCNNNNNNNGG	4 cut(s)	292, 832, 1237, 1455
BseMI	GCAATG	3 cut(s)	780, 1295, 1432
BseMII	CTCAG	4 cut(s)	321, 612, 623, 1104
BseNI	ACTGG	3 cut(s)	31, 763, 1400
BseRI	GAGGAG	2 cut(s)	145, 467
BseSI	GKGCMC	3 cut(s)	389, 535, 1675
BseXI	GCAGC	4 cut(s)	487, 1181, 1544, 1731
BsgI	GTGCAG	1 cut(s)	1244
Bsh1236I	CGCG	1 cut(s)	115
BshFI	GGCC	3 cut(s)	273, 852, 1230
BsiHKAI	GWGCWC	2 cut(s)	182, 790
BsiHKCI	CYCGRG	1 cut(s)	876
BsiSI	CCGG	2 cut(s)	749, 1585
BslFI	GGGAC	2 cut(s)	65, 1091
BslI	CCNNNNNNNGG	4 cut(s)	292, 832, 1237, 1455
BsmAI	GTCTC	6 cut(s)	213, 449, 617, 653, 805, 1208
BsmBI	CGTCTC	2 cut(s)	213, 1208
BsmFI	GGGAC	2 cut(s)	65, 1091
BsmI	GAATGC	1 cut(s)	924
BsnI	GGCC	3 cut(s)	273, 852, 1230
Bso31I	GGTCTC	1 cut(s)	805
BsoBI	CYCGRG	1 cut(s)	876
Bsp1286I	GDGCHC	5 cut(s)	182, 389, 535, 790, 1675
Bsp1407I	TGTACA	1 cut(s)	930
Bsp143I	GATC	4 cut(s)	305, 556, 1345, 1552
Bsp1720I	GCTNAGC	1 cut(s)	330
BspACI	CCGC	1 cut(s)	1110
BspANI	GGCC	3 cut(s)	273, 852, 1230
BspCNI	CTCAG	4 cut(s)	322, 613, 622, 1105
BspFNI	CGCG	1 cut(s)	115
BspHI	TCATGA	2 cut(s)	337, 1549
BspLI	GGNNCC	4 cut(s)	226, 558, 1164, 1599
BspMAI	CTGCAG	1 cut(s)	1171
BspPI	GGATC	3 cut(s)	313, 551, 564
BspQI	GCTCTTC	1 cut(s)	1318
BspTI	CTTAAG	1 cut(s)	190
BspTNI	GGTCTC	1 cut(s)	805
BsrDI	GCAATG	3 cut(s)	780, 1295, 1432
BsrGI	TGTACA	1 cut(s)	930
BsrI	ACTGG	3 cut(s)	31, 763, 1400
BssECI	CCNNGG	9 cut(s)	285, 324, 634, 831, 870, 990, 1073, 1207, 1693
BssMI	GATC	4 cut(s)	305, 556, 1345, 1552
BssNAI	GTATAC	1 cut(s)	14
BssT1I	CCWWGG	2 cut(s)	324, 870
Bst1107I	GTATAC	1 cut(s)	14
Bst2UI	CCWGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
Bst4CI	ACNGT	9 cut(s)	224, 250, 384, 460, 537, 617, 628, 963, 1280
Bst6I	CTCTTC	2 cut(s)	460, 1318
BstAFI	CTTAAG	1 cut(s)	190
BstAPI	GCANNNNNTGC	1 cut(s)	983
BstAUI	TGTACA	1 cut(s)	930
BstC8I	GCNNGC	5 cut(s)	215, 271, 1148, 1243, 1255
BstDEI	CTNAG	5 cut(s)	330, 609, 621, 1113, 1121
BstDSI	CCRYGG	2 cut(s)	831, 1693
BstEII	GGTNACC	1 cut(s)	691
BstF5I	GGATG	2 cut(s)	1000, 1598
BstFNI	CGCG	1 cut(s)	115
BstKTI	GATC	4 cut(s)	308, 559, 1348, 1555
BstMAI	GTCTC	6 cut(s)	213, 449, 617, 653, 805, 1208
BstMBI	GATC	4 cut(s)	305, 556, 1345, 1552
BstMWI	GCNNNNNNNGC	4 cut(s)	785, 983, 1030, 1325
BstNI	CCWGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
BstPI	GGTNACC	1 cut(s)	691
BstSCI	CCNGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
BstSFI	CTRYAG	3 cut(s)	70, 591, 1167
BstSLI	GKGCMC	3 cut(s)	389, 535, 1675
BstUI	CGCG	1 cut(s)	115
BstV1I	GCAGC	4 cut(s)	487, 1181, 1544, 1731
BstV2I	GAAGAC	1 cut(s)	1691
BstX2I	RGATCY	2 cut(s)	305, 556
BstXI	CCANNNNNNTGG	3 cut(s)	838, 997, 1609
BstYI	RGATCY	2 cut(s)	305, 556
BstZ17I	GTATAC	1 cut(s)	14
BsuRI	GGCC	3 cut(s)	273, 852, 1230
BtgI	CCRYGG	2 cut(s)	831, 1693
BtsCI	GGATG	2 cut(s)	1000, 1598
BtsI	GCAGTG	1 cut(s)	1675
BtsIMutI	CAGTG	6 cut(s)	533, 756, 897, 959, 1381, 1675
Cac8I	GCNNGC	5 cut(s)	215, 271, 1148, 1243, 1255
CciI	TCATGA	2 cut(s)	337, 1549
Cfr13I	GGNCC	2 cut(s)	1228, 1392
Csp6I	GTAC	3 cut(s)	380, 931, 1782
CspCI	CAANNNNNGTGG	2 cut(s)	1140, 1175
CviQI	GTAC	3 cut(s)	380, 931, 1782
DdeI	CTNAG	5 cut(s)	330, 609, 621, 1113, 1121
DpnI	GATC	4 cut(s)	307, 558, 1347, 1554
DpnII	GATC	4 cut(s)	305, 556, 1345, 1552
Eam1104I	CTCTTC	2 cut(s)	460, 1318
EarI	CTCTTC	2 cut(s)	460, 1318
Ecl136II	GAGCTC	2 cut(s)	180, 788
Eco130I	CCWWGG	2 cut(s)	324, 870
Eco147I	AGGCCT	1 cut(s)	852
Eco24I	GRGCYC	2 cut(s)	182, 790
Eco31I	GGTCTC	1 cut(s)	805
Eco47I	GGWCC	1 cut(s)	1392
Eco53kI	GAGCTC	2 cut(s)	180, 788
Eco57I	CTGAAG	2 cut(s)	921, 1357
Eco88I	CYCGRG	1 cut(s)	876
Eco91I	GGTNACC	1 cut(s)	691
EcoICRI	GAGCTC	2 cut(s)	180, 788
EcoO109I	RGGNCCY	1 cut(s)	1228
EcoO65I	GGTNACC	1 cut(s)	691
EcoRII	CCWGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
EcoT14I	CCWWGG	2 cut(s)	324, 870
EcoT22I	ATGCAT	1 cut(s)	889
EcoT38I	GRGCYC	2 cut(s)	182, 790
ErhI	CCWWGG	2 cut(s)	324, 870
Esp3I	CGTCTC	2 cut(s)	213, 1208
FalI	AAGNNNNNCTT	2 cut(s)	680, 712
FaqI	GGGAC	2 cut(s)	65, 1091
FbaI	TGATCA	1 cut(s)	1345
FblI	GTMKAC	1 cut(s)	13
Fnu4HI	GCNGC	5 cut(s)	501, 1110, 1170, 1533, 1745
FokI	GGATG	2 cut(s)	1007, 1605
FriOI	GRGCYC	2 cut(s)	182, 790
Fsp4HI	GCNGC	5 cut(s)	501, 1110, 1170, 1533, 1745
FspBI	CTAG	5 cut(s)	701, 1005, 1287, 1362, 1680
GluI	GCNGC	5 cut(s)	501, 1110, 1170, 1533, 1745
GsuI	CTGGAG	2 cut(s)	780, 1190
HaeIII	GGCC	3 cut(s)	273, 852, 1230
HapII	CCGG	2 cut(s)	749, 1585
HincII	GTYRAC	1 cut(s)	643
HindII	GTYRAC	1 cut(s)	643
HindIII	AAGCTT	1 cut(s)	211
HinfI	GANTC	4 cut(s)	395, 406, 1203, 1546
HpaII	CCGG	2 cut(s)	749, 1585
HphI	GGTGA	4 cut(s)	682, 703, 926, 1675
Hpy166II	GTNNAC	4 cut(s)	14, 32, 643, 1793
Hpy188I	TCNGA	5 cut(s)	44, 144, 394, 464, 622
Hpy188III	TCNNGA	6 cut(s)	338, 611, 1395, 1550, 1556, 1794
Hpy8I	GTNNAC	4 cut(s)	14, 32, 643, 1793
HpyAV	CCTTC	3 cut(s)	399, 510, 842
HpyCH4III	ACNGT	9 cut(s)	224, 250, 384, 460, 537, 617, 628, 963, 1280
HpyCH4IV	ACGT	1 cut(s)	676
HpyF10VI	GCNNNNNNNGC	4 cut(s)	785, 983, 1030, 1325
HpyF3I	CTNAG	5 cut(s)	330, 609, 621, 1113, 1121
HpySE526I	ACGT	1 cut(s)	676
Ksp22I	TGATCA	1 cut(s)	1345
Kzo9I	GATC	4 cut(s)	305, 556, 1345, 1552
LguI	GCTCTTC	1 cut(s)	1318
LmnI	GCTCC	2 cut(s)	434, 1271
Lsp1109I	GCAGC	4 cut(s)	487, 1181, 1544, 1731
LweI	GCATC	1 cut(s)	713
MaeI	CTAG	5 cut(s)	701, 1005, 1287, 1362, 1680
MaeII	ACGT	1 cut(s)	676
MaeIII	GTNAC	8 cut(s)	88, 149, 473, 508, 691, 1064, 1289, 1413
MalI	GATC	4 cut(s)	307, 558, 1347, 1554
MboI	GATC	4 cut(s)	305, 556, 1345, 1552
MboII	GAAGA	7 cut(s)	477, 559, 1335, 1366, 1666, 1691, 1742
MflI	RGATCY	2 cut(s)	305, 556
MhlI	GDGCHC	5 cut(s)	182, 389, 535, 790, 1675
MlyI	GAGTC	2 cut(s)	415, 1197
MmeI	TCCRAC	4 cut(s)	519, 755, 828, 1480
Mph1103I	ATGCAT	1 cut(s)	889
MroXI	GAANNNNTTC	2 cut(s)	79, 816
MseI	TTAA	4 cut(s)	171, 191, 552, 1026
MslI	CAYNNNNRTG	1 cut(s)	1607
MspA1I	CMGCKG	2 cut(s)	20, 1112
MspCI	CTTAAG	1 cut(s)	190
MspI	CCGG	2 cut(s)	749, 1585
MspR9I	CCNGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
Mva1269I	GAATGC	1 cut(s)	924
MvaI	CCWGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
MvnI	CGCG	1 cut(s)	115
MwoI	GCNNNNNNNGC	4 cut(s)	785, 983, 1030, 1325
NdeII	GATC	4 cut(s)	305, 556, 1345, 1552
NlaIV	GGNNCC	4 cut(s)	226, 558, 1164, 1599
NmeAIII	GCCGAG	1 cut(s)	1098
NmuCI	GTSAC	6 cut(s)	88, 473, 508, 691, 1064, 1413
NsiI	ATGCAT	1 cut(s)	889
OliI	CACNNNNGTG	1 cut(s)	1607
PaeR7I	CTCGAG	1 cut(s)	876
PagI	TCATGA	2 cut(s)	337, 1549
PceI	AGGCCT	1 cut(s)	852
PciSI	GCTCTTC	1 cut(s)	1318
PctI	GAATGC	1 cut(s)	924
PdmI	GAANNNNTTC	2 cut(s)	79, 816
PfeI	GAWTC	2 cut(s)	395, 1546
PfoI	TCCNGGA	1 cut(s)	414
PkrI	GCNGC	5 cut(s)	502, 1111, 1171, 1534, 1746
PleI	GAGTC	2 cut(s)	414, 1197
PpsI	GAGTC	2 cut(s)	414, 1197
PshBI	ATTAAT	1 cut(s)	171
Psp124BI	GAGCTC	2 cut(s)	182, 790
Psp6I	CCWGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
PspEI	GGTNACC	1 cut(s)	691
PspGI	CCWGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
PspN4I	GGNNCC	4 cut(s)	226, 558, 1164, 1599
PspPI	GGNCC	2 cut(s)	1228, 1392
PspXI	VCTCGAGB	1 cut(s)	876
PsrI	GAACNNNNNNTAC	2 cut(s)	1774, 1806
PstI	CTGCAG	1 cut(s)	1171
PsuI	RGATCY	2 cut(s)	305, 556
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	3 cut(s)	381, 932, 1783
RsaNI	GTAC	3 cut(s)	380, 931, 1782
RseI	CAYNNNNRTG	1 cut(s)	1607
SacI	GAGCTC	2 cut(s)	182, 790
SapI	GCTCTTC	1 cut(s)	1318
SaqAI	TTAA	4 cut(s)	171, 191, 552, 1026
SatI	GCNGC	5 cut(s)	501, 1110, 1170, 1533, 1745
Sau3AI	GATC	4 cut(s)	305, 556, 1345, 1552
Sau96I	GGNCC	2 cut(s)	1228, 1392
SchI	GAGTC	2 cut(s)	415, 1197
ScrFI	CCNGG	6 cut(s)	287, 416, 635, 991, 1208, 1456
SduI	GDGCHC	5 cut(s)	182, 389, 535, 790, 1675
SfaNI	GCATC	1 cut(s)	713
SfcI	CTRYAG	3 cut(s)	70, 591, 1167
Sfr274I	CTCGAG	1 cut(s)	876
SinI	GGWCC	1 cut(s)	1392
SlaI	CTCGAG	1 cut(s)	876
SmiMI	CAYNNNNRTG	1 cut(s)	1607
SmlI	CTYRAG	9 cut(s)	190, 360, 665, 789, 876, 1418, 1526, 1556, 1616
SmoI	CTYRAG	9 cut(s)	190, 360, 665, 789, 876, 1418, 1526, 1556, 1616
SseBI	AGGCCT	1 cut(s)	852
SsiI	CCGC	1 cut(s)	1110
SspI	AATATT	2 cut(s)	1105, 1758
SspMI	CTAG	5 cut(s)	701, 1005, 1287, 1362, 1680
SstI	GAGCTC	2 cut(s)	182, 790
StuI	AGGCCT	1 cut(s)	852
StyD4I	CCNGG	6 cut(s)	285, 414, 633, 989, 1206, 1454
StyI	CCWWGG	2 cut(s)	324, 870
TaaI	ACNGT	9 cut(s)	224, 250, 384, 460, 537, 617, 628, 963, 1280
TaiI	ACGT	1 cut(s)	679
TaqI	TCGA	3 cut(s)	240, 784, 877
TatI	WGTACW	3 cut(s)	379, 930, 1781
TauI	GCSGC	1 cut(s)	1112
TfiI	GAWTC	2 cut(s)	395, 1546
Tru1I	TTAA	4 cut(s)	171, 191, 552, 1026
Tru9I	TTAA	4 cut(s)	171, 191, 552, 1026
TscAI	CASTG	6 cut(s)	540, 763, 904, 966, 1381, 1675
TseFI	GTSAC	6 cut(s)	88, 473, 508, 691, 1064, 1413
TseI	GCWGC	4 cut(s)	500, 1169, 1532, 1744
Tsp45I	GTSAC	6 cut(s)	88, 473, 508, 691, 1064, 1413
TspGWI	ACGGA	1 cut(s)	1184
TspRI	CASTG	6 cut(s)	540, 763, 904, 966, 1381, 1675
Vha464I	CTTAAG	1 cut(s)	190
VpaK11BI	GGWCC	1 cut(s)	1392
VspI	ATTAAT	1 cut(s)	171
XapI	RAATTY	5 cut(s)	138, 233, 812, 1083, 1440
XhoI	CTCGAG	1 cut(s)	876
XmiI	GTMKAC	1 cut(s)	13
XmnI	GAANNNNTTC	2 cut(s)	79, 816
XspI	CTAG	5 cut(s)	701, 1005, 1287, 1362, 1680
Zsp2I	ATGCAT	1 cut(s)	889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.