Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000252.1

Orthogroup ID

OG0005148

Physical Location & Seq

Genomic Coordinates Reverse (-)

46291 .. 53137

Gene Structure 6847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000252.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

atgaacactcgtgaagagctctttcaggtctgcgaacaatgtaacaatgttaaatatgaaagggagggatatttcatcactgttgatattgagaaagggatgcaagatggacaagaggtggttttctatgaggatggtgaacccataattgatggagaacctggagatttaaaagtcagtgctttgaccttaccaccttggtcgcgtggggtttcaaagttcttgcaaattcagagatgtaactcctcccaatctccaattaatgagagctcaaagcccttaagaaccatcacttcatcaagcttgcgagacggttccactaaattcttcgattttactgttattggtagtggagttgctggcctacgctatgccctggaagtggcaaaacatggatctgttgctgtcattaccaaggctgagcctcatgaaagtaatacaaattatgctcaaggtggtgttagtgctgtactgtgcccttcggattctgtggagagtcatgtccaggacaccattgtagcaggagcttatctatgtgatgaggagactgtcagagttgtttgtacagagggacctgaaagaattagagaattaattgcaatgggagcatcatttgatcacggggaggatggaaacttgcacctaacaagagaggggggtcactctcatcacagaattgttcatgctgctgatatgacaggaagggagattgaacgggcactgttggaggcagttattaaggatcctaatatcttcatgtttcaacaccattttgctatagatttgctaacttctcaggacggttctgagacagtttgcctgggtgttgacactttgaatacagagacacttgaggtgatacgttttatttcaaaggtgactttactagcatcaggtggggctggacaaatctatccaaccactacaaatcctccggtagccactggagatggaattgcaatggctcatcgagctcaagctgtggtctccaacatggaatttgttcagttccaccccacggctttggctgatgaaggcctccctgtcaaatctaccaaggctcgaggaaatgcatttctcatcactgaagctgtcaggggtgatggtggcattctgtacaatttagacatggaaaggttcatgccactgtatgatgaacgagcagaacttgctaccagggatgtggtagctagaagcatagatgaccagcttaaaaagcgtaatgagaagtatgtgctacttgatataagtcacaagccgagggacaaaattctatcacacttccctaatattgctgctgagtgccttagaggtggcttggatataactcgccagccaattcctgtggttcctgcagctcattatatgtgtgggggtgtccgtgctggactccagggagagacgaatgtgcagggcctttatgtggcaggcgaagttgcttgcacaggtttgcatggagctaaccgtcttgctagtaactcattgcttgaagctctggtttttgcacgaagagcagtccagccctccattgatcacatgaagagctctagccttgacttcagtgcttcaaattggtggtccagaccagttgtgcctatgtcacttgagcgcaatgtcatcaacaaaattttgaccatgaccaggaaagtaagaaaagaattgcaatcaatcatgtggaactatgttggaattgttcgttctacaacaaggctcgaggcagcagaacaaaagattcatgatcttgaggcgaaatgggaggactacttattccggttgggatgggaacccacaatggtggggcttgaggcttgtgaaatgagaaacttcttttgttgtgcaaagatggtggtgagcagtgcccttgctagacatgagagccgtggtcttcactacacgattgattttcctcatgttgaagaaattgctgaggctaaggttagcatggatcttgtgaggctattttttgcagtacttggcattttagctttgggagtgaatgctggtggttctgggagttgtaggtttccggccatatacaactttggtgactcaaactccgacaccggcgctatttcagccgccatagaagtggttcctcctcccaatggtgaaagtttctttggacattcttctggacgcttttctgatggtcgccttattatagatttcatagctgagaaattgcagctaccatatctcagtccatacttggactcacttgggactaatttcaggcatggtgcaaattttgcaactggcggttcatccattaggccaggcggttatagcccgtttcatctcggcattcaagtttcacagttcataagattcaagtctcaatccatagccctctacaagcaacacagttcaaacactcaaagacttcccaggccggaggacttctcgaaagctttgtacacaattgatattggtcagaatgatcttgcctatggttttcaacacgggacgattcagcaagttcaagcttccattcctgatattctcactcagttagaccaagccatgaataaactatacaaagaaggggcaaggtttttttgggtgcataacacaggccctcatgggtgcttgccctataatgtcatctatgacaaatcaaagcctggtaatctggaccagattggctgcgtgaagcctaccaacgaggtagctcaggagttcaatcggcagcttaagaacagcgtattaaacttgaggaagcagctccctcttgcagtattcacttatgtcgatgtgtattcagctaaatatacagtgataagcaacgcgaaaaatgaaggttttgtggatccattcgacttctgctgtggcagttacaaggggtaccatattgattgtggaaagaaggccatagtgaatggaacggtatatggcaacccttgtaataatccatcaagacatattagttgggatggcatacactactctcaggcagcaaacatattgcttgccaatcaaattattaacggctcactatctgatccaccagtttcaatcacagaggcttgtcatgggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00250 ko00760 ko01100 map00250 map00760 map01100

Pfam Domains

Protein Families

FAD_binding_2 Succ_DH_flav_C

Protein Analysis

1012

Amino Acids

111.38

Weight (kDa)

5.97

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14760
fragaria_vesca	FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750 FvH4_6g50750
malus_domestica	MD09G1032700.v1.1 MD17G1034300.v1.1
prunus_persica	Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1 Prupe.3G285300_v2.0.a1
pyrus_communis	pycom111g02610 pycom17g03170
rosa_chinensis	RchiOBHm_Chr2g0171691
rosa_laevigata	RLG00000022029
rosa_multiflora	Rmu_ssc0000252.1_g000010
rosa_roxburghii	Rroxscaffold_2G00080520
rosa_rugosa	Rorug02G0555400
rosa_samantha	Rh2AG630400 Rh2BG640900 Rh2BG643400 Rh2CG609100 Rh2DG651800
rosa_wichuraiana	Rw2G052170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2844
AccB1I	GGYRCC	1 cut(s)	2844
AccII	CGCG	2 cut(s)	205, 2789
AciI	CCGC	3 cut(s)	2079, 2259, 2280
AclWI	GGATC	7 cut(s)	403, 737, 750, 1953, 2804, 2817, 2996
AcoI	YGGCCR	1 cut(s)	2028
AcsI	RAATTY	6 cut(s)	228, 323, 998, 1269, 1626, 2245
AcuI	CTGAAG	2 cut(s)	1107, 1543
AfaI	GTAC	6 cut(s)	471, 565, 1118, 1971, 2417, 2846
AfiI	CCNNNNNNNGG	5 cut(s)	382, 1018, 1423, 1641, 2105
AflII	CTTAAG	2 cut(s)	280, 2693
AjuI	GAANNNNNNNTTGG	2 cut(s)	2103, 2135
AleI	CACNNNNGTG	1 cut(s)	1793
Alw21I	GWGCWC	4 cut(s)	21, 272, 976, 1547
Alw26I	GTCTC	7 cut(s)	303, 539, 803, 839, 991, 1394, 2340
AlwI	GGATC	7 cut(s)	403, 737, 750, 1953, 2804, 2817, 2996
Ama87I	CYCGRG	2 cut(s)	1062, 1712
AoxI	GGCC	8 cut(s)	361, 1036, 1414, 2028, 2273, 2390, 2575, 2868
ApeKI	GCWGC	9 cut(s)	686, 1295, 1355, 1718, 2185, 2646, 2689, 2722, 2954
ApoI	RAATTY	6 cut(s)	228, 323, 998, 1269, 1626, 2245
ArsI	GACNNNNNNTTYG	2 cut(s)	1562, 1594
AseI	ATTAAT	2 cut(s)	261, 593
Asp700I	GAANNNNTTC	2 cut(s)	1002, 2091
Asp718I	GGTACC	1 cut(s)	2844
AspLEI	GCGC	2 cut(s)	1611, 2069
AspS9I	GGNCC	5 cut(s)	572, 1414, 1578, 2576, 2635
AsuHPI	GGTGA	7 cut(s)	149, 868, 889, 1112, 1861, 2057, 2120
AvaI	CYCGRG	2 cut(s)	1062, 1712
AvaII	GGWCC	3 cut(s)	572, 1578, 2635
BaeGI	GKGCMC	3 cut(s)	479, 721, 1861
BamHI	GGATCC	2 cut(s)	742, 2809
BanI	GGYRCC	1 cut(s)	2844
BanII	GRGCYC	4 cut(s)	21, 272, 976, 1547
BauI	CACGAG	1 cut(s)	9
BbsI	GAAGAC	1 cut(s)	1877
Bbv12I	GWGCWC	4 cut(s)	21, 272, 976, 1547
BbvCI	CCTCAGC	1 cut(s)	1926
BbvI	GCAGC	9 cut(s)	673, 1282, 1367, 1730, 2197, 2633, 2701, 2734, 2966
BceAI	ACGGC	3 cut(s)	1035, 1863, 3004
BclI	TGATCA	2 cut(s)	616, 1531
BcoDI	GTCTC	7 cut(s)	303, 539, 803, 839, 991, 1394, 2340
BfaI	CTAG	5 cut(s)	887, 1191, 1473, 1548, 1866
BfmI	CTRYAG	2 cut(s)	777, 1353
BfoI	RGCGCY	1 cut(s)	2070
BfrI	CTTAAG	2 cut(s)	280, 2693
BlpI	GCTNAGC	1 cut(s)	420
BmcAI	AGTACT	1 cut(s)	1971
Bme18I	GGWCC	3 cut(s)	572, 1578, 2635
BmeT110I	CYCGRG	2 cut(s)	1062, 1712
BmgT120I	GGNCC	5 cut(s)	572, 1414, 1578, 2576, 2635
BmiI	GGNNCC	8 cut(s)	316, 573, 744, 1350, 1785, 2094, 2811, 2846
BmsI	GCATC	3 cut(s)	90, 617, 899
BpiI	GAAGAC	1 cut(s)	1877
BplI	GAGNNNNNCTC	2 cut(s)	2387, 2419
BpmI	CTGGAG	3 cut(s)	183, 966, 1376
Bpu10I	CCTNAGC	3 cut(s)	1926, 1932, 2673
Bpu1102I	GCTNAGC	1 cut(s)	420
BpuEI	CTTGAG	7 cut(s)	435, 872, 960, 1625, 1763, 1823, 2734
BsaI	GGTCTC	1 cut(s)	991
BsaWI	WCCGGW	2 cut(s)	934, 1770
BsaXI	ACNNNNNCTCC	4 cut(s)	916, 946, 2039, 2069
Bsc4I	CCNNNNNNNGG	5 cut(s)	382, 1018, 1423, 1641, 2105
Bse118I	RCCGGY	1 cut(s)	2063
Bse1I	ACTGG	4 cut(s)	949, 1586, 2260, 3008
Bse3DI	GCAATG	4 cut(s)	606, 966, 1481, 1618
BseGI	GGATG	7 cut(s)	105, 139, 634, 1186, 1784, 2264, 2938
BseLI	CCNNNNNNNGG	5 cut(s)	382, 1018, 1423, 1641, 2105
BseMI	GCAATG	4 cut(s)	606, 966, 1481, 1618
BseNI	ACTGG	4 cut(s)	949, 1586, 2260, 3008
BseRI	GAGGAG	3 cut(s)	235, 557, 2088
BseSI	GKGCMC	3 cut(s)	479, 721, 1861
BseXI	GCAGC	9 cut(s)	673, 1282, 1367, 1730, 2197, 2633, 2701, 2734, 2966
BsgI	GTGCAG	1 cut(s)	1430
Bsh1236I	CGCG	2 cut(s)	205, 2789
BshFI	GGCC	8 cut(s)	363, 1038, 1416, 2030, 2275, 2392, 2577, 2870
BshNI	GGYRCC	1 cut(s)	2844
BsiHKAI	GWGCWC	4 cut(s)	21, 272, 976, 1547
BsiHKCI	CYCGRG	2 cut(s)	1062, 1712
BsiSI	CCGG	5 cut(s)	935, 1771, 2027, 2064, 2393
BslFI	GGGAC	4 cut(s)	585, 1277, 2236, 2479
BslI	CCNNNNNNNGG	5 cut(s)	382, 1018, 1423, 1641, 2105
BsmAI	GTCTC	7 cut(s)	303, 539, 803, 839, 991, 1394, 2340
BsmBI	CGTCTC	2 cut(s)	303, 1394
BsmFI	GGGAC	4 cut(s)	585, 1277, 2236, 2479
BsmI	GAATGC	3 cut(s)	1110, 2002, 2304
BsnI	GGCC	8 cut(s)	363, 1038, 1416, 2030, 2275, 2392, 2577, 2870
Bso31I	GGTCTC	1 cut(s)	991
BsoBI	CYCGRG	2 cut(s)	1062, 1712
Bsp1286I	GDGCHC	7 cut(s)	21, 272, 479, 721, 976, 1547, 1861
Bsp1407I	TGTACA	3 cut(s)	563, 1116, 2415
Bsp143I	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
Bsp1720I	GCTNAGC	1 cut(s)	420
BspACI	CCGC	3 cut(s)	2079, 2259, 2280
BspANI	GGCC	8 cut(s)	363, 1038, 1416, 2030, 2275, 2392, 2577, 2870
BspFNI	CGCG	2 cut(s)	205, 2789
BspHI	TCATGA	2 cut(s)	427, 1735
BspLI	GGNNCC	8 cut(s)	316, 573, 744, 1350, 1785, 2094, 2811, 2846
BspMAI	CTGCAG	1 cut(s)	1357
BspPI	GGATC	7 cut(s)	403, 737, 750, 1953, 2804, 2817, 2996
BspQI	GCTCTTC	3 cut(s)	9, 1504, 1535
BspT107I	GGYRCC	1 cut(s)	2844
BspTI	CTTAAG	2 cut(s)	280, 2693
BspTNI	GGTCTC	1 cut(s)	991
BsrDI	GCAATG	4 cut(s)	606, 966, 1481, 1618
BsrFI	RCCGGY	1 cut(s)	2063
BsrGI	TGTACA	3 cut(s)	563, 1116, 2415
BsrI	ACTGG	4 cut(s)	949, 1586, 2260, 3008
BssAI	RCCGGY	1 cut(s)	2063
BssMI	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
BssSI	CACGAG	1 cut(s)	9
BssT1I	CCWWGG	3 cut(s)	197, 414, 1056
Bst2BI	CACGAG	1 cut(s)	9
Bst6I	CTCTTC	3 cut(s)	9, 1504, 1535
BstAFI	CTTAAG	2 cut(s)	280, 2693
BstAPI	GCANNNNNTGC	2 cut(s)	1169, 2249
BstAUI	TGTACA	3 cut(s)	563, 1116, 2415
BstC8I	GCNNGC	7 cut(s)	305, 361, 1334, 1429, 1441, 2591, 2970
BstDSI	CCRYGG	2 cut(s)	1017, 1879
BstF5I	GGATG	7 cut(s)	105, 139, 634, 1186, 1784, 2264, 2938
BstFNI	CGCG	2 cut(s)	205, 2789
BstH2I	RGCGCY	1 cut(s)	2070
BstHHI	GCGC	2 cut(s)	1611, 2069
BstKTI	GATC	9 cut(s)	398, 619, 745, 1534, 1741, 1948, 2443, 2812, 3004
BstMAI	GTCTC	7 cut(s)	303, 539, 803, 839, 991, 1394, 2340
BstMBI	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
BstMWI	GCNNNNNNNGC	8 cut(s)	605, 971, 1169, 1216, 1511, 2075, 2249, 2286
BstSFI	CTRYAG	2 cut(s)	777, 1353
BstSLI	GKGCMC	3 cut(s)	479, 721, 1861
BstUI	CGCG	2 cut(s)	205, 2789
BstV1I	GCAGC	9 cut(s)	673, 1282, 1367, 1730, 2197, 2633, 2701, 2734, 2966
BstV2I	GAAGAC	1 cut(s)	1877
BstX2I	RGATCY	4 cut(s)	395, 742, 1945, 2809
BstXI	CCANNNNNNTGG	4 cut(s)	1024, 1183, 1795, 2089
BstYI	RGATCY	4 cut(s)	395, 742, 1945, 2809
BsuRI	GGCC	8 cut(s)	363, 1038, 1416, 2030, 2275, 2392, 2577, 2870
BtgI	CCRYGG	2 cut(s)	1017, 1879
BtsCI	GGATG	7 cut(s)	105, 139, 634, 1186, 1784, 2264, 2938
BtsI	GCAGTG	1 cut(s)	1861
BtsIMutI	CAGTG	9 cut(s)	78, 184, 719, 942, 1083, 1145, 1567, 1861, 2781
Cac8I	GCNNGC	7 cut(s)	305, 361, 1334, 1429, 1441, 2591, 2970
CciI	TCATGA	2 cut(s)	427, 1735
CfoI	GCGC	2 cut(s)	1611, 2069
Cfr10I	RCCGGY	1 cut(s)	2063
Cfr13I	GGNCC	5 cut(s)	572, 1414, 1578, 2576, 2635
CseI	GACGC	1 cut(s)	2145
Csp6I	GTAC	6 cut(s)	470, 564, 1117, 1970, 2416, 2845
CspCI	CAANNNNNGTGG	4 cut(s)	1326, 1361, 1827, 1862
CviQI	GTAC	6 cut(s)	470, 564, 1117, 1970, 2416, 2845
DpnI	GATC	9 cut(s)	397, 618, 744, 1533, 1740, 1947, 2442, 2811, 3003
DpnII	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
DraI	TTTAAA	1 cut(s)	171
EaeI	YGGCCR	1 cut(s)	2028
Eam1104I	CTCTTC	3 cut(s)	9, 1504, 1535
EarI	CTCTTC	3 cut(s)	9, 1504, 1535
Ecl136II	GAGCTC	4 cut(s)	19, 270, 974, 1545
Eco130I	CCWWGG	3 cut(s)	197, 414, 1056
Eco147I	AGGCCT	1 cut(s)	1038
Eco24I	GRGCYC	4 cut(s)	21, 272, 976, 1547
Eco31I	GGTCTC	1 cut(s)	991
Eco47I	GGWCC	3 cut(s)	572, 1578, 2635
Eco53kI	GAGCTC	4 cut(s)	19, 270, 974, 1545
Eco57I	CTGAAG	2 cut(s)	1107, 1543
Eco88I	CYCGRG	2 cut(s)	1062, 1712
EcoICRI	GAGCTC	4 cut(s)	19, 270, 974, 1545
EcoO109I	RGGNCCY	3 cut(s)	572, 1414, 2576
EcoT14I	CCWWGG	3 cut(s)	197, 414, 1056
EcoT22I	ATGCAT	1 cut(s)	1075
EcoT38I	GRGCYC	4 cut(s)	21, 272, 976, 1547
ErhI	CCWWGG	3 cut(s)	197, 414, 1056
Esp3I	CGTCTC	2 cut(s)	303, 1394
FaqI	GGGAC	4 cut(s)	585, 1277, 2236, 2479
FbaI	TGATCA	2 cut(s)	616, 1531
FokI	GGATG	7 cut(s)	112, 146, 641, 1193, 1791, 2251, 2945
FriOI	GRGCYC	4 cut(s)	21, 272, 976, 1547
FspBI	CTAG	5 cut(s)	887, 1191, 1473, 1548, 1866
GlaI	GCGC	2 cut(s)	1610, 2068
GsuI	CTGGAG	3 cut(s)	183, 966, 1376
HaeII	RGCGCY	1 cut(s)	2070
HaeIII	GGCC	8 cut(s)	363, 1038, 1416, 2030, 2275, 2392, 2577, 2870
HapII	CCGG	5 cut(s)	935, 1771, 2027, 2064, 2393
HgaI	GACGC	1 cut(s)	2145
HhaI	GCGC	2 cut(s)	1611, 2069
Hin6I	GCGC	2 cut(s)	1609, 2067
HinP1I	GCGC	2 cut(s)	1609, 2067
HincII	GTYRAC	1 cut(s)	829
HindII	GTYRAC	1 cut(s)	829
HindIII	AAGCTT	3 cut(s)	301, 2409, 2484
HinfI	GANTC	8 cut(s)	485, 496, 1389, 1732, 2048, 2213, 2328, 2470
HpaII	CCGG	5 cut(s)	935, 1771, 2027, 2064, 2393
HphI	GGTGA	7 cut(s)	149, 868, 889, 1112, 1861, 2057, 2120
Hpy166II	GTNNAC	3 cut(s)	140, 829, 2418
Hpy188I	TCNGA	8 cut(s)	234, 484, 554, 808, 2059, 2146, 2436, 3001
Hpy8I	GTNNAC	3 cut(s)	140, 829, 2418
HpyAV	CCTTC	6 cut(s)	489, 696, 1028, 2537, 2792, 2860
HpyCH4IV	ACGT	1 cut(s)	862
HpyF10VI	GCNNNNNNNGC	8 cut(s)	605, 971, 1169, 1216, 1511, 2075, 2249, 2286
HpySE526I	ACGT	1 cut(s)	862
HspAI	GCGC	2 cut(s)	1609, 2067
KpnI	GGTACC	1 cut(s)	2848
Ksp22I	TGATCA	2 cut(s)	616, 1531
Kzo9I	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
LguI	GCTCTTC	3 cut(s)	9, 1504, 1535
LmnI	GCTCC	4 cut(s)	524, 605, 1457, 2730
Lsp1109I	GCAGC	9 cut(s)	673, 1282, 1367, 1730, 2197, 2633, 2701, 2734, 2966
LweI	GCATC	3 cut(s)	90, 617, 899
MaeI	CTAG	5 cut(s)	887, 1191, 1473, 1548, 1866
MaeII	ACGT	1 cut(s)	862
MaeIII	GTNAC	9 cut(s)	41, 239, 659, 877, 1250, 1475, 1599, 2045, 2834
MalI	GATC	9 cut(s)	397, 618, 744, 1533, 1740, 1947, 2442, 2811, 3003
MboI	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
MboII	GAAGA	8 cut(s)	26, 319, 745, 1521, 1552, 1877, 1928, 2121
MfeI	CAATTG	1 cut(s)	2421
MflI	RGATCY	4 cut(s)	395, 742, 1945, 2809
MhlI	GDGCHC	7 cut(s)	21, 272, 479, 721, 976, 1547, 1861
MlyI	GAGTC	4 cut(s)	505, 1383, 2042, 2207
MmeI	TCCRAC	5 cut(s)	705, 941, 1014, 1666, 2082
Mph1103I	ATGCAT	1 cut(s)	1075
MroXI	GAANNNNTTC	2 cut(s)	1002, 2091
MslI	CAYNNNNRTG	2 cut(s)	1793, 2087
MspCI	CTTAAG	2 cut(s)	280, 2693
MspI	CCGG	5 cut(s)	935, 1771, 2027, 2064, 2393
MunI	CAATTG	1 cut(s)	2421
Mva1269I	GAATGC	3 cut(s)	1110, 2002, 2304
MvnI	CGCG	2 cut(s)	205, 2789
MwoI	GCNNNNNNNGC	8 cut(s)	605, 971, 1169, 1216, 1511, 2075, 2249, 2286
NdeII	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
NlaIV	GGNNCC	8 cut(s)	316, 573, 744, 1350, 1785, 2094, 2811, 2846
NmeAIII	GCCGAG	2 cut(s)	1284, 2280
NmuCI	GTSAC	5 cut(s)	659, 877, 1250, 1599, 2045
NsiI	ATGCAT	1 cut(s)	1075
OliI	CACNNNNGTG	1 cut(s)	1793
PaeR7I	CTCGAG	2 cut(s)	1062, 1712
PagI	TCATGA	2 cut(s)	427, 1735
PceI	AGGCCT	1 cut(s)	1038
PciSI	GCTCTTC	3 cut(s)	9, 1504, 1535
PctI	GAATGC	3 cut(s)	1110, 2002, 2304
PdmI	GAANNNNTTC	2 cut(s)	1002, 2091
PfeI	GAWTC	4 cut(s)	485, 1732, 2328, 2470
PfoI	TCCNGGA	1 cut(s)	504
PleI	GAGTC	4 cut(s)	504, 1383, 2042, 2207
PpsI	GAGTC	4 cut(s)	504, 1383, 2042, 2207
PpuMI	RGGWCCY	1 cut(s)	572
PshBI	ATTAAT	2 cut(s)	261, 593
Psp124BI	GAGCTC	4 cut(s)	21, 272, 976, 1547
Psp5II	RGGWCCY	1 cut(s)	572
PspN4I	GGNNCC	8 cut(s)	316, 573, 744, 1350, 1785, 2094, 2811, 2846
PspPI	GGNCC	5 cut(s)	572, 1414, 1578, 2576, 2635
PspPPI	RGGWCCY	1 cut(s)	572
PspXI	VCTCGAGB	2 cut(s)	1062, 1712
PstI	CTGCAG	1 cut(s)	1357
PsuI	RGATCY	4 cut(s)	395, 742, 1945, 2809
RsaI	GTAC	6 cut(s)	471, 565, 1118, 1971, 2417, 2846
RsaNI	GTAC	6 cut(s)	470, 564, 1117, 1970, 2416, 2845
RseI	CAYNNNNRTG	2 cut(s)	1793, 2087
SacI	GAGCTC	4 cut(s)	21, 272, 976, 1547
SapI	GCTCTTC	3 cut(s)	9, 1504, 1535
Sau3AI	GATC	9 cut(s)	395, 616, 742, 1531, 1738, 1945, 2440, 2809, 3001
Sau96I	GGNCC	5 cut(s)	572, 1414, 1578, 2576, 2635
ScaI	AGTACT	1 cut(s)	1971
SchI	GAGTC	4 cut(s)	505, 1383, 2042, 2207
SduI	GDGCHC	7 cut(s)	21, 272, 479, 721, 976, 1547, 1861
SfaNI	GCATC	3 cut(s)	90, 617, 899
SfcI	CTRYAG	2 cut(s)	777, 1353
Sfr274I	CTCGAG	2 cut(s)	1062, 1712
SgrAI	CRCCGGYG	1 cut(s)	2063
SinI	GGWCC	3 cut(s)	572, 1578, 2635
SlaI	CTCGAG	2 cut(s)	1062, 1712
SmiMI	CAYNNNNRTG	2 cut(s)	1793, 2087
SseBI	AGGCCT	1 cut(s)	1038
SsiI	CCGC	3 cut(s)	2079, 2259, 2280
SspI	AATATT	1 cut(s)	1291
SspMI	CTAG	5 cut(s)	887, 1191, 1473, 1548, 1866
SstI	GAGCTC	4 cut(s)	21, 272, 976, 1547
StuI	AGGCCT	1 cut(s)	1038
StyI	CCWWGG	3 cut(s)	197, 414, 1056
TaiI	ACGT	1 cut(s)	865
TaqI	TCGA	7 cut(s)	330, 970, 1063, 1713, 2405, 2751, 2817
TatI	WGTACW	5 cut(s)	469, 563, 1116, 1969, 2415
TauI	GCSGC	1 cut(s)	2081
TfiI	GAWTC	4 cut(s)	485, 1732, 2328, 2470
TscAI	CASTG	9 cut(s)	85, 184, 726, 949, 1090, 1152, 1567, 1861, 2781
TseFI	GTSAC	5 cut(s)	659, 877, 1250, 1599, 2045
TseI	GCWGC	9 cut(s)	686, 1295, 1355, 1718, 2185, 2646, 2689, 2722, 2954
Tsp45I	GTSAC	5 cut(s)	659, 877, 1250, 1599, 2045
TspGWI	ACGGA	1 cut(s)	1370
TspRI	CASTG	9 cut(s)	85, 184, 726, 949, 1090, 1152, 1567, 1861, 2781
Vha464I	CTTAAG	2 cut(s)	280, 2693
VpaK11BI	GGWCC	3 cut(s)	572, 1578, 2635
VspI	ATTAAT	2 cut(s)	261, 593
XapI	RAATTY	6 cut(s)	228, 323, 998, 1269, 1626, 2245
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2855
XhoI	CTCGAG	2 cut(s)	1062, 1712
XmnI	GAANNNNTTC	2 cut(s)	1002, 2091
XspI	CTAG	5 cut(s)	887, 1191, 1473, 1548, 1866
ZrmI	AGTACT	1 cut(s)	1971
Zsp2I	ATGCAT	1 cut(s)	1075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.