Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0007157

Physical Location & Seq

Genomic Coordinates Reverse (-)

2434544 .. 2440153

Gene Structure 5610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g03640.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3357 bp

ATGTCGCCGCCGATGAGTCTCCCTGCAACTCACCTTACCACTTCTCGCTTCCCGCCAAAAACCATAACCGACCACCCATCACTGTCTCCCTTCTTTTCCTTTCCCAGAACCCTCCCCTCCCAAAATCCTAAATCCTCTAAATTCACCATTCGGAGCTCCGCCGCCGACACCAAAACACTTGCGCCCAAGTCTGCCATTCAGAGAATCGCCGAGAAGCTCCGAAGCCTCGGGTTCACCGAGAGCACCCAAAATCCCGACAGGCAGCCCGATACGAAGTCTGCCGGGGAAATCTTTGTTCCGATTCCGGAGAAATTGCCCAAGTACCGGGTCGGGCACACGCTAGATGCAAGCTGGAGCACGCCCGAGAACCCGGTCCCAGAACCGGGTACCGGCGGAGCGATTGCGAGGTTTCATGAGTTGAGGCGGGAGGTGAAGAAGCAGAAGGAATTAGAGAGGGAGGAGAGGAAGGGGAAGGGGGAGGGGAGGGTTCCGACATTGGCGGAGCTGAGATTGGGGAAGGGTGAGTTGAGGCGGCTGACGACGGTTGGGCTTGGGCTGAGGAAGAAGCTGAAGATTGGGAAGGCTGGGATTACTGAAGGGATTGTGAATGGGATTCACGAGAACTGGCGGCGGTCGGAGGTTGTGAAGATTGTGTGTGAGGATTTGTGTAGGTTGAACATGAAGAGGACTCATGACTTGTTGGAGAGAAAAACTGGAGGGCTGGTTGTCTGGAGGGCTGGAAGTAAGATAATTTTGTATAGGGGGGTGAACTATAAGTATCCATACTTTTTGCGTGACAATGTTTGCGAAGATTCAATGAGTGAGGCTAACTCTAATGCACTACCTGATACACACATCAATGATGGAGGAAATGAGAGTGGTACATCCAGCAAAAATGATGTAAACTCTGCTATAGTACCAAGTACAAGCTATGAACAAGCTCAACCAGCATTAGTACAAGGTGTTGGTTTGCCAGGTAGAGTTCGGTTTCAACTTCCAGGCGAGGCACAACTTTCAGAAGAAAATGACAGCATGTTAGAGGGACTGGGGCCGCGGTTTACTGATTGGTGGGGTTACGAACCTCTTCCCGTTGATGCTGACCTTCTACCAGCCATTGTTCCTGGATACAGGAAACCTTTCCGCCTTCTTCCCTATGGTCTGAAGCCTAAACTAACAGATGATGAAATGACCACAATAAGAAGACTCGGCCGACCCTTACCATGTCATTTTGCATTGGGCAGAAATAGAAATCTTCAGGGTTTGGCTGCTTCCATTGTCAAACTCTGGGAAAAATGTGAGATTGCCAAAATAGCTGTTAAAAGAGGGGTACAGAACACTAACAGCGAGATGATGGCTGAAGAGTTAAAGAGGCTGACTGGAGGAACTCTGCTTGCTCGGGACAGGGAATTTATAGTTTTGTATAGGGGAAAGGATTTTCTGCCACCTGCAGTTTCGTCTGCAATAGAAGAGCGGAGGAGGCATGCAATACGTGTTGAGCGTAGTACCTCAGTTCCATCTAGACAGGATCTTGAACCCAGGACCGAGCCAGAAAATAAACATGTCTGGAGGGATGATCATAAAATGGGGCTTCCATCCGCAAGAAAGCTTAAGTCTACCGAGGCAGCTGTCGATAGGACTAGCATTAAATTGTCCATGGCTTTAGAAAAGAGAGTAAAGGCAGAAAAACTTCTAGCGGATCTGGAGAACGCAGCGACCCCCCAACAACCGGAAATAGATAAAGAAGGTATTACTAAAGAAGAAAGATATATGCTAAGGAAGGTTGGCTTGAGAATGAAGCCTTTCCTACTGATGGGAAGGCGAGGAGTATTTGATGGAACAATTGAAAACATGCATCTTCATTGGAAGTACAGGGAACTCGTTAAGATAATATCTAATGAGAAAAGCATCGAAGCTGTTCACCAAGTAGCACAAACCTTAGAGGCAGAAAGTGGTGGGATACTAGTGGCAGTGGAGAGAGTGAGTAAGGGTTATGCAATTATTGTGTATCGTGGAAAAAATTATAGCAGGCCTGCTTCTTTGAGACCTCAGACACTTCTGACTAAAAGAGAAGCAATGAAACGTTCTATTGAGGCACAGCGTCGTGAGTCTTTGAAACTTCATGTTTTAAAGCTTAATGAAAACATAGCTGAATTGAAGCTTCAATTGAATAAAGACAAGGAATCAGACAATACGCACTCGGTTAACGAATCAAGAACTCAATTGGCTAGAGACAAACAAGAAGCTCATGTGATTCCCATAAGTTTGAATGATGGAGTGGCACCTGTTCTGAACGGACAATTAGCCACGCAACAAGACAATATGACGAGTTTCTCTCCGACCTGTGACGAGGATGAATCTGGGAAAGTTGAGCCAGGATCTTCGAATGAATCAGTTACAAATGAAGAGTATGAAACTAGTACAGTTGAGACAGGATCTTCAAATGAATCAGTTACATATGAAAGTCGTGCAAATTCGCTCAAGGATATAAATGGAGAAGTTGAAGACTTCCCATCTACGTGTTGTCCCGAAGATGTTCTGGCTAGAAACAAACAAGAAGTTAATGTGACTCCCATGAAATTGGAAGATAGAACGGGCACTGTAGTAAACGGTCAGGTAGCCACACAACAGGATAAAGTCCTTACTTTCTCTTCGATCTGGGGTGAGGATGAAAATGGTAAAGCTGAGCCAGTATCTTCCAGTGAACCAACTAGAAATGAAATGCATGCAAATTTGCTCAAGGATGTAAATGGAGAGGAGGGAGTCCCCGTCTCTAAATCTTTCTCGACAAACCGTTTGAGCAGTTCAGCAACCGTGGTCAAACATCGTCGCATTTCTGACAATGAGGCCAGGGACTCATCAGACAGATCTGGCAATAGTGAATCAGAACCGTCAGTCCCCGTACTGGTAAGAAAGAATTTTAACGAGAGGCCCTCAAAGGCGGTTCATCTTTCCAACAATGAGAGGCTGCTTCTGCGAAAACAAGCCCTCAAGATGAAAAACCGCCCTGTGATAGCAGTTGGAAGGAGCAACATTGTAACTGGTGTTGCTAAAACAATCAAGGCGCACTTTGAGAAGCACCCTCTTGCGATAGTGAACGTCAAGGGCAGAGCAAAAGGAACTTCGGTCAGGGAAGTTGTTTTCAAACTGGAGCAAGCAACAGGTGCGGTTTTAGTCTCCCAGGAGCCTAGCAAAGTTATACTTTACAGGGGCTGGGGCGCAGGGGAAAATCCTCGCCGTAATGGAAGTAACACAGGGAAAATTGCTTCTTCTCAGGGTGCCGTGTCTCCCGAACTCCTGGCGGCAATAAGACTCGAGTGCGGCTTTAAATCTCGCGAAGGCGAAGATGCAGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000372 GO:0000373 GO:0000375 GO:0000376 GO:0000377 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009532 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

1119

Amino Acids

124.19

Weight (kDa)

9.33

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01370
fragaria_vesca	FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050
malus_domestica	MD17G1040600.v1.1
prunus_persica	Prupe.3G278400_v2.0.a1
pyrus_communis	pycom17g03640
rosa_chinensis	RchiOBHm_Chr2g0170301
rosa_laevigata	RLG00000021945
rosa_multiflora	Rmu_co8444867.1_g000001 Rmu_sc0012445.1_g000003
rosa_roxburghii	Rroxscaffold_2G00081450
rosa_rugosa	Rorug02G0548100
rosa_samantha	Rh2AG619400 Rh2BG630300 Rh2CG600400 Rh2DG643200
rosa_wichuraiana	Rw2G051310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1453
Acc36I	ACCTGC	1 cut(s)	1453
Acc65I	GGTACC	1 cut(s)	386
AccB1I	GGYRCC	3 cut(s)	386, 2278, 3275
AccBSI	CCGCTC	1 cut(s)	1471
AccI	GTMKAC	1 cut(s)	1613
AccII	CGCG	2 cut(s)	1054, 3333
AccIII	TCCGGA	1 cut(s)	304
AclI	AACGTT	1 cut(s)	2080
AclWI	GGATC	4 cut(s)	1533, 1704, 2383, 2440
AcoI	YGGCCR	1 cut(s)	1207
AcsI	RAATTY	5 cut(s)	140, 1406, 2470, 2728, 2914
AcuI	CTGAAG	5 cut(s)	590, 615, 1181, 1238, 1377
AfiI	CCNNNNNNNGG	7 cut(s)	324, 382, 383, 389, 1726, 1810, 2902
AflII	CTTAAG	1 cut(s)	1607
AflIII	ACRYGT	3 cut(s)	1489, 1558, 2516
AhlI	ACTAGT	2 cut(s)	1960, 2414
AjnI	CCWGG	8 cut(s)	973, 997, 1120, 1535, 2371, 2846, 3177, 3294
AloI	GAACNNNNNNTCC	2 cut(s)	2877, 2909
Alw21I	GWGCWC	3 cut(s)	158, 245, 359
Alw26I	GTCTC	8 cut(s)	23, 90, 2035, 2223, 2420, 2773, 3178, 3288
AlwI	GGATC	4 cut(s)	1533, 1704, 2383, 2440
AlwNI	CAGNNNCTG	1 cut(s)	3210
Ama87I	CYCGRG	4 cut(s)	227, 362, 1395, 3311
Aor13HI	TCCGGA	1 cut(s)	304
AoxI	GGCC	5 cut(s)	1049, 1207, 2027, 2844, 2927
ApeKI	GCWGC	7 cut(s)	262, 1265, 1622, 1709, 2965, 3347, 3350
ApoI	RAATTY	5 cut(s)	140, 1406, 2470, 2728, 2914
ArsI	GACNNNNNNTTYG	2 cut(s)	2776, 2808
Asp700I	GAANNNNTTC	6 cut(s)	1083, 1136, 1686, 1799, 1914, 2532
Asp718I	GGTACC	1 cut(s)	386
AspLEI	GCGC	3 cut(s)	184, 3064, 3218
AspS9I	GGNCC	4 cut(s)	373, 1049, 1539, 2928
AsuC2I	CCSGG	4 cut(s)	283, 326, 371, 384
AsuHPI	GGTGA	8 cut(s)	23, 136, 226, 442, 533, 778, 1910, 2672
AsuII	TTCGAA	1 cut(s)	2381
AvaI	CYCGRG	4 cut(s)	227, 362, 1395, 3311
AvaII	GGWCC	2 cut(s)	373, 1539
BaeGI	GKGCMC	2 cut(s)	336, 2597
BanI	GGYRCC	3 cut(s)	386, 2278, 3275
BanII	GRGCYC	1 cut(s)	158
BauI	CACGAG	1 cut(s)	617
BbsI	GAAGAC	2 cut(s)	1207, 2508
Bbv12I	GWGCWC	3 cut(s)	158, 245, 359
BbvCI	CCTCAGC	1 cut(s)	557
BbvI	GCAGC	6 cut(s)	274, 1252, 1634, 1721, 2952, 3337
BccI	CCATC	9 cut(s)	85, 857, 1345, 1522, 1600, 1804, 1826, 2264, 2518
BceAI	ACGGC	2 cut(s)	3219, 3263
BciT130I	CCWGG	8 cut(s)	975, 999, 1122, 1537, 2373, 2848, 3179, 3296
BciVI	GTATCC	3 cut(s)	789, 1118, 1950
BclI	TGATCA	1 cut(s)	1573
BcnI	CCSGG	4 cut(s)	283, 326, 371, 384
BcoDI	GTCTC	8 cut(s)	23, 90, 2035, 2223, 2420, 2773, 3178, 3288
BcuI	ACTAGT	2 cut(s)	1960, 2414
BfmI	CTRYAG	3 cut(s)	912, 1446, 2598
BfrI	CTTAAG	1 cut(s)	1607
BfuAI	ACCTGC	1 cut(s)	1453
BfuI	GTATCC	3 cut(s)	789, 1118, 1950
BglII	AGATCT	1 cut(s)	2864
BlpI	GCTNAGC	1 cut(s)	2682
Bme18I	GGWCC	2 cut(s)	373, 1539
BmeT110I	CYCGRG	4 cut(s)	227, 362, 1395, 3311
BmgT120I	GGNCC	4 cut(s)	373, 1049, 1539, 2928
BmiI	GGNNCC	7 cut(s)	375, 388, 489, 1050, 2280, 3183, 3277
BmrI	ACTGGG	1 cut(s)	1055
BmsI	GCATC	5 cut(s)	334, 1084, 1861, 1914, 3334
BmuI	ACTGGG	1 cut(s)	1055
BpiI	GAAGAC	2 cut(s)	1207, 2508
BplI	GAGNNNNNCTC	6 cut(s)	815, 847, 2317, 2349, 2915, 2947
BpmI	CTGGAG	7 cut(s)	373, 735, 751, 1398, 1585, 1721, 3167
Bpu10I	CCTNAGC	2 cut(s)	557, 1772
Bpu1102I	GCTNAGC	1 cut(s)	2682
Bpu14I	TTCGAA	1 cut(s)	2381
BpuEI	CTTGAG	4 cut(s)	1807, 2462, 2720, 2972
BpuMI	CCSGG	4 cut(s)	283, 326, 371, 384
BsaAI	YACGTR	2 cut(s)	1490, 2517
BsaI	GGTCTC	1 cut(s)	2035
BsaJI	CCNNGG	9 cut(s)	226, 282, 1052, 1535, 1617, 1653, 2811, 2847, 3177
BsaWI	WCCGGW	2 cut(s)	304, 1726
BsaXI	ACNNNNNCTCC	4 cut(s)	708, 738, 2751, 2781
Bsc4I	CCNNNNNNNGG	7 cut(s)	324, 382, 383, 389, 1726, 1810, 2902
Bse118I	RCCGGY	1 cut(s)	389
Bse1I	ACTGG	9 cut(s)	629, 718, 1050, 1381, 2687, 2697, 2907, 3043, 3150
Bse3DI	GCAATG	1 cut(s)	2079
BseAI	TCCGGA	1 cut(s)	304
BseBI	CCWGG	8 cut(s)	975, 999, 1122, 1537, 2373, 2848, 3179, 3296
BseDI	CCNNGG	9 cut(s)	226, 282, 1052, 1535, 1617, 1653, 2811, 2847, 3177
BseGI	GGATG	6 cut(s)	884, 1576, 1592, 2356, 2671, 2746
BseLI	CCNNNNNNNGG	7 cut(s)	324, 382, 383, 389, 1726, 1810, 2902
BseMI	GCAATG	1 cut(s)	2079
BseMII	CTCAG	6 cut(s)	497, 548, 1521, 2060, 2673, 3284
BseNI	ACTGG	9 cut(s)	629, 718, 1050, 1381, 2687, 2697, 2907, 3043, 3150
BseRI	GAGGAG	4 cut(s)	473, 1489, 1836, 2768
BseSI	GKGCMC	2 cut(s)	336, 2597
BseX3I	CGGCCG	1 cut(s)	1207
BseXI	GCAGC	6 cut(s)	274, 1252, 1634, 1721, 2952, 3337
BseYI	CCCAGC	2 cut(s)	584, 3210
Bsh1236I	CGCG	2 cut(s)	1054, 3333
Bsh1285I	CGRYCG	2 cut(s)	635, 1210
BshFI	GGCC	5 cut(s)	1051, 1209, 2029, 2846, 2929
BshNI	GGYRCC	3 cut(s)	386, 2278, 3275
BsiEI	CGRYCG	2 cut(s)	635, 1210
BsiHKAI	GWGCWC	3 cut(s)	158, 245, 359
BsiHKCI	CYCGRG	4 cut(s)	227, 362, 1395, 3311
BsiSI	CCGG	7 cut(s)	282, 305, 325, 371, 383, 390, 1727
BslFI	GGGAC	7 cut(s)	359, 1056, 1412, 2508, 2747, 2864, 2879
BslI	CCNNNNNNNGG	7 cut(s)	324, 382, 383, 389, 1726, 1810, 2902
BsmAI	GTCTC	8 cut(s)	23, 90, 2035, 2223, 2420, 2773, 3178, 3288
BsmBI	CGTCTC	1 cut(s)	2773
BsmFI	GGGAC	7 cut(s)	359, 1056, 1412, 2508, 2747, 2864, 2879
BsnI	GGCC	5 cut(s)	1051, 1209, 2029, 2846, 2929
Bso31I	GGTCTC	1 cut(s)	2035
BsoBI	CYCGRG	4 cut(s)	227, 362, 1395, 3311
Bsp119I	TTCGAA	1 cut(s)	2381
Bsp1286I	GDGCHC	5 cut(s)	158, 245, 336, 359, 2597
Bsp13I	TCCGGA	1 cut(s)	304
Bsp143I	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
Bsp1720I	GCTNAGC	1 cut(s)	2682
Bsp19I	CCATGG	1 cut(s)	1653
Bsp68I	TCGCGA	1 cut(s)	3333
BspANI	GGCC	5 cut(s)	1051, 1209, 2029, 2846, 2929
BspCNI	CTCAG	6 cut(s)	498, 549, 1520, 2059, 2674, 3283
BspEI	TCCGGA	1 cut(s)	304
BspFNI	CGCG	2 cut(s)	1054, 3333
BspHI	TCATGA	2 cut(s)	412, 691
BspLI	GGNNCC	7 cut(s)	375, 388, 489, 1050, 2280, 3183, 3277
BspMAI	CTGCAG	1 cut(s)	1450
BspMI	ACCTGC	1 cut(s)	1453
BspPI	GGATC	4 cut(s)	1533, 1704, 2383, 2440
BspQI	GCTCTTC	1 cut(s)	1461
BspT104I	TTCGAA	1 cut(s)	2381
BspT107I	GGYRCC	3 cut(s)	386, 2278, 3275
BspTI	CTTAAG	1 cut(s)	1607
BspTNI	GGTCTC	1 cut(s)	2035
BsrBI	CCGCTC	1 cut(s)	1471
BsrDI	GCAATG	1 cut(s)	2079
BsrFI	RCCGGY	1 cut(s)	389
BsrI	ACTGG	9 cut(s)	629, 718, 1050, 1381, 2687, 2697, 2907, 3043, 3150
BssAI	RCCGGY	1 cut(s)	389
BssECI	CCNNGG	9 cut(s)	226, 282, 1052, 1535, 1617, 1653, 2811, 2847, 3177
BssMI	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
BssSI	CACGAG	1 cut(s)	617
BssT1I	CCWWGG	1 cut(s)	1653
Bst2BI	CACGAG	1 cut(s)	617
Bst2UI	CCWGG	8 cut(s)	975, 999, 1122, 1537, 2373, 2848, 3179, 3296
Bst4CI	ACNGT	8 cut(s)	84, 544, 2422, 2599, 2609, 2792, 2812, 2889
Bst6I	CTCTTC	6 cut(s)	677, 1089, 1353, 1461, 2397, 2653
BstAFI	CTTAAG	1 cut(s)	1607
BstAPI	GCANNNNNTGC	1 cut(s)	3161
BstBAI	YACGTR	2 cut(s)	1490, 2517
BstBI	TTCGAA	1 cut(s)	2381
BstC8I	GCNNGC	8 cut(s)	349, 359, 1392, 1482, 2027, 2031, 2724, 3153
BstDEI	CTNAG	9 cut(s)	506, 557, 1507, 1772, 1936, 2046, 2682, 3270, 3354
BstDSI	CCRYGG	3 cut(s)	1052, 1653, 2811
BstF5I	GGATG	6 cut(s)	884, 1576, 1592, 2356, 2671, 2746
BstFNI	CGCG	2 cut(s)	1054, 3333
BstHHI	GCGC	3 cut(s)	184, 3064, 3218
BstKTI	GATC	7 cut(s)	1528, 1576, 1699, 2378, 2435, 2655, 2867
BstMAI	GTCTC	8 cut(s)	23, 90, 2035, 2223, 2420, 2773, 3178, 3288
BstMBI	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
BstMCI	CGRYCG	2 cut(s)	635, 1210
BstMWI	GCNNNNNNNGC	5 cut(s)	947, 1310, 1477, 2971, 3161
BstNI	CCWGG	8 cut(s)	975, 999, 1122, 1537, 2373, 2848, 3179, 3296
BstNSI	RCATGY	5 cut(s)	1036, 1484, 1562, 1852, 2726
BstSFI	CTRYAG	3 cut(s)	912, 1446, 2598
BstSLI	GKGCMC	2 cut(s)	336, 2597
BstUI	CGCG	2 cut(s)	1054, 3333
BstV1I	GCAGC	6 cut(s)	274, 1252, 1634, 1721, 2952, 3337
BstV2I	GAAGAC	2 cut(s)	1207, 2508
BstX2I	RGATCY	5 cut(s)	1525, 1696, 2375, 2432, 2864
BstXI	CCANNNNNNTGG	1 cut(s)	2578
BstYI	RGATCY	5 cut(s)	1525, 1696, 2375, 2432, 2864
BstZI	CGGCCG	1 cut(s)	1207
BsuI	GTATCC	3 cut(s)	789, 1118, 1950
BsuRI	GGCC	5 cut(s)	1051, 1209, 2029, 2846, 2929
BtgI	CCRYGG	3 cut(s)	1052, 1653, 2811
BtsCI	GGATG	6 cut(s)	884, 1576, 1592, 2356, 2671, 2746
BtsI	GCAGTG	1 cut(s)	1974
BtsIMutI	CAGTG	4 cut(s)	80, 1974, 2595, 2704
BtuMI	TCGCGA	1 cut(s)	3333
BveI	ACCTGC	1 cut(s)	1453
Cac8I	GCNNGC	8 cut(s)	349, 359, 1392, 1482, 2027, 2031, 2724, 3153
CaiI	CAGNNNCTG	1 cut(s)	3210
CciI	TCATGA	2 cut(s)	412, 691
CfoI	GCGC	3 cut(s)	184, 3064, 3218
Cfr10I	RCCGGY	1 cut(s)	389
Cfr13I	GGNCC	4 cut(s)	373, 1049, 1539, 2928
Cfr42I	CCGCGG	1 cut(s)	1055
CseI	GACGC	1 cut(s)	2087
DdeI	CTNAG	9 cut(s)	506, 557, 1507, 1772, 1936, 2046, 2682, 3270, 3354
DpnI	GATC	7 cut(s)	1527, 1575, 1698, 2377, 2434, 2654, 2866
DpnII	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
DraI	TTTAAA	2 cut(s)	2127, 3325
EaeI	YGGCCR	1 cut(s)	1207
EagI	CGGCCG	1 cut(s)	1207
Eam1104I	CTCTTC	6 cut(s)	677, 1089, 1353, 1461, 2397, 2653
EarI	CTCTTC	6 cut(s)	677, 1089, 1353, 1461, 2397, 2653
EciI	GGCGGA	4 cut(s)	148, 408, 515, 1130
Ecl136II	GAGCTC	1 cut(s)	156
EclXI	CGGCCG	1 cut(s)	1207
Eco130I	CCWWGG	1 cut(s)	1653
Eco147I	AGGCCT	1 cut(s)	2029
Eco24I	GRGCYC	1 cut(s)	158
Eco31I	GGTCTC	1 cut(s)	2035
Eco47I	GGWCC	2 cut(s)	373, 1539
Eco52I	CGGCCG	1 cut(s)	1207
Eco53kI	GAGCTC	1 cut(s)	156
Eco57I	CTGAAG	5 cut(s)	590, 615, 1181, 1238, 1377
Eco88I	CYCGRG	4 cut(s)	227, 362, 1395, 3311
EcoICRI	GAGCTC	1 cut(s)	156
EcoO109I	RGGNCCY	1 cut(s)	2928
EcoRII	CCWGG	8 cut(s)	973, 997, 1120, 1535, 2371, 2846, 3177, 3294
EcoT14I	CCWWGG	1 cut(s)	1653
EcoT22I	ATGCAT	2 cut(s)	1854, 2724
EcoT38I	GRGCYC	1 cut(s)	158
ErhI	CCWWGG	1 cut(s)	1653
Esp3I	CGTCTC	1 cut(s)	2773
FalI	AAGNNNNNCTT	6 cut(s)	1769, 1801, 3050, 3082, 3183, 3215
FaqI	GGGAC	7 cut(s)	359, 1056, 1412, 2508, 2747, 2864, 2879
FauI	CCCGC	2 cut(s)	60, 417
FauNDI	CATATG	1 cut(s)	2455
FbaI	TGATCA	1 cut(s)	1573
FblI	GTMKAC	1 cut(s)	1613
FokI	GGATG	6 cut(s)	871, 1579, 1583, 2363, 2678, 2753
FriOI	GRGCYC	1 cut(s)	158
GlaI	GCGC	3 cut(s)	183, 3063, 3217
GsaI	CCCAGC	2 cut(s)	588, 3214
GsuI	CTGGAG	7 cut(s)	373, 735, 751, 1398, 1585, 1721, 3167
HaeIII	GGCC	5 cut(s)	1051, 1209, 2029, 2846, 2929
HapII	CCGG	7 cut(s)	282, 305, 325, 371, 383, 390, 1727
HgaI	GACGC	1 cut(s)	2087
HhaI	GCGC	3 cut(s)	184, 3064, 3218
Hin6I	GCGC	3 cut(s)	182, 3062, 3216
HinP1I	GCGC	3 cut(s)	182, 3062, 3216
HincII	GTYRAC	1 cut(s)	2203
HindII	GTYRAC	1 cut(s)	2203
HindIII	AAGCTT	3 cut(s)	1604, 2129, 2156
HpaI	GTTAAC	1 cut(s)	2203
HpaII	CCGG	7 cut(s)	282, 305, 325, 371, 383, 390, 1727
HphI	GGTGA	8 cut(s)	23, 136, 226, 442, 533, 778, 1910, 2672
Hpy99I	CGWCG	3 cut(s)	544, 2103, 2829
HpyCH4III	ACNGT	8 cut(s)	84, 544, 2422, 2599, 2609, 2792, 2812, 2889
HpyCH4IV	ACGT	4 cut(s)	1489, 2080, 2516, 3096
HpyF10VI	GCNNNNNNNGC	5 cut(s)	947, 1310, 1477, 2971, 3161
HpyF3I	CTNAG	9 cut(s)	506, 557, 1507, 1772, 1936, 2046, 2682, 3270, 3354
HpySE526I	ACGT	4 cut(s)	1489, 2080, 2516, 3096
HspAI	GCGC	3 cut(s)	182, 3062, 3216
Kpn2I	TCCGGA	1 cut(s)	304
KpnI	GGTACC	1 cut(s)	390
Ksp22I	TGATCA	1 cut(s)	1573
KspAI	GTTAAC	1 cut(s)	2203
KspI	CCGCGG	1 cut(s)	1055
Kzo9I	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
LguI	GCTCTTC	1 cut(s)	1461
LmnI	GCTCC	9 cut(s)	153, 161, 222, 354, 395, 502, 3024, 3148, 3181
Lsp1109I	GCAGC	6 cut(s)	274, 1252, 1634, 1721, 2952, 3337
LweI	GCATC	5 cut(s)	334, 1084, 1861, 1914, 3334
MaeII	ACGT	4 cut(s)	1489, 2080, 2516, 3096
MaeIII	GTNAC	8 cut(s)	794, 1073, 2342, 2392, 2449, 2563, 3034, 3245
MalI	GATC	7 cut(s)	1527, 1575, 1698, 2377, 2434, 2654, 2866
MbiI	CCGCTC	1 cut(s)	1471
MboI	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
MfeI	CAATTG	3 cut(s)	1839, 2162, 2219
MflI	RGATCY	5 cut(s)	1525, 1696, 2375, 2432, 2864
MhlI	GDGCHC	5 cut(s)	158, 245, 336, 359, 2597
MlyI	GAGTC	8 cut(s)	25, 682, 1197, 2114, 2560, 2769, 2846, 3303
MmeI	TCCRAC	6 cut(s)	515, 615, 681, 2360, 2976, 2998
Mph1103I	ATGCAT	2 cut(s)	1854, 2724
MroI	TCCGGA	1 cut(s)	304
MroXI	GAANNNNTTC	6 cut(s)	1083, 1136, 1686, 1799, 1914, 2532
MslI	CAYNNNNRTG	2 cut(s)	858, 2515
MspA1I	CMGCKG	3 cut(s)	1054, 1625, 3350
MspCI	CTTAAG	1 cut(s)	1607
MspI	CCGG	7 cut(s)	282, 305, 325, 371, 383, 390, 1727
MunI	CAATTG	3 cut(s)	1839, 2162, 2219
MvaI	CCWGG	8 cut(s)	975, 999, 1122, 1537, 2373, 2848, 3179, 3296
MvnI	CGCG	2 cut(s)	1054, 3333
MwoI	GCNNNNNNNGC	5 cut(s)	947, 1310, 1477, 2971, 3161
NciI	CCSGG	4 cut(s)	283, 326, 371, 384
NcoI	CCATGG	1 cut(s)	1653
NdeI	CATATG	1 cut(s)	2455
NdeII	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
NlaIV	GGNNCC	7 cut(s)	375, 388, 489, 1050, 2280, 3183, 3277
NmeAIII	GCCGAG	2 cut(s)	235, 1185
NmuCI	GTSAC	3 cut(s)	794, 2342, 2563
NruI	TCGCGA	1 cut(s)	3333
NsiI	ATGCAT	2 cut(s)	1854, 2724
NspI	RCATGY	5 cut(s)	1036, 1484, 1562, 1852, 2726
NspV	TTCGAA	1 cut(s)	2381
PaeI	GCATGC	2 cut(s)	1484, 2726
PaeR7I	CTCGAG	1 cut(s)	3311
PagI	TCATGA	2 cut(s)	412, 691
PaqCI	CACCTGC	1 cut(s)	1453
PceI	AGGCCT	1 cut(s)	2029
PciI	ACATGT	1 cut(s)	1558
PciSI	GCTCTTC	1 cut(s)	1461
PcsI	WCGNNNNNNNCGW	2 cut(s)	234, 1495
PdmI	GAANNNNTTC	6 cut(s)	1083, 1136, 1686, 1799, 1914, 2532
PfoI	TCCNGGA	1 cut(s)	1120
PleI	GAGTC	8 cut(s)	24, 682, 1197, 2113, 2560, 2768, 2846, 3303
PpsI	GAGTC	8 cut(s)	24, 682, 1197, 2113, 2560, 2768, 2846, 3303
Ppu21I	YACGTR	2 cut(s)	1490, 2517
PscI	ACATGT	1 cut(s)	1558
Psp124BI	GAGCTC	1 cut(s)	158
Psp1406I	AACGTT	1 cut(s)	2080
Psp6I	CCWGG	8 cut(s)	973, 997, 1120, 1535, 2371, 2846, 3177, 3294
PspFI	CCCAGC	2 cut(s)	584, 3210
PspGI	CCWGG	8 cut(s)	973, 997, 1120, 1535, 2371, 2846, 3177, 3294
PspN4I	GGNNCC	7 cut(s)	375, 388, 489, 1050, 2280, 3183, 3277
PspPI	GGNCC	4 cut(s)	373, 1049, 1539, 2928
PspXI	VCTCGAGB	1 cut(s)	3311
PstI	CTGCAG	1 cut(s)	1450
PstNI	CAGNNNCTG	1 cut(s)	3210
PsuI	RGATCY	5 cut(s)	1525, 1696, 2375, 2432, 2864
PvuII	CAGCTG	2 cut(s)	1625, 3350
RruI	TCGCGA	1 cut(s)	3333
RseI	CAYNNNNRTG	2 cut(s)	858, 2515
SacI	GAGCTC	1 cut(s)	158
SacII	CCGCGG	1 cut(s)	1055
SapI	GCTCTTC	1 cut(s)	1461
Sau3AI	GATC	7 cut(s)	1525, 1573, 1696, 2375, 2432, 2652, 2864
Sau96I	GGNCC	4 cut(s)	373, 1049, 1539, 2928
SchI	GAGTC	8 cut(s)	25, 682, 1197, 2114, 2560, 2769, 2846, 3303
SduI	GDGCHC	5 cut(s)	158, 245, 336, 359, 2597
SfaNI	GCATC	5 cut(s)	334, 1084, 1861, 1914, 3334
SfcI	CTRYAG	3 cut(s)	912, 1446, 2598
Sfr274I	CTCGAG	1 cut(s)	3311
Sfr303I	CCGCGG	1 cut(s)	1055
SfuI	TTCGAA	1 cut(s)	2381
SgrBI	CCGCGG	1 cut(s)	1055
SinI	GGWCC	2 cut(s)	373, 1539
SlaI	CTCGAG	1 cut(s)	3311
SmiMI	CAYNNNNRTG	2 cut(s)	858, 2515
SmlI	CTYRAG	6 cut(s)	1607, 1786, 2477, 2735, 2987, 3311
SmoI	CTYRAG	6 cut(s)	1607, 1786, 2477, 2735, 2987, 3311
SpeI	ACTAGT	2 cut(s)	1960, 2414
SphI	GCATGC	2 cut(s)	1484, 2726
SseBI	AGGCCT	1 cut(s)	2029
SstI	GAGCTC	1 cut(s)	158
StuI	AGGCCT	1 cut(s)	2029
StyI	CCWWGG	1 cut(s)	1653
TaaI	ACNGT	8 cut(s)	84, 544, 2422, 2599, 2609, 2792, 2812, 2889
TaiI	ACGT	4 cut(s)	1492, 2083, 2519, 3099
TaqI	TCGA	6 cut(s)	1629, 1908, 2381, 2651, 2783, 3312
TaqII	GACCGA	2 cut(s)	1556, 3112
TatI	WGTACW	4 cut(s)	923, 955, 1866, 2417
TauI	GCSGC	7 cut(s)	10, 164, 535, 631, 1054, 3302, 3321
TscAI	CASTG	4 cut(s)	87, 1974, 2602, 2704
TseFI	GTSAC	3 cut(s)	794, 2342, 2563
TseI	GCWGC	7 cut(s)	262, 1265, 1622, 1709, 2965, 3347, 3350
Tsp45I	GTSAC	3 cut(s)	794, 2342, 2563
TspGWI	ACGGA	1 cut(s)	2307
TspRI	CASTG	4 cut(s)	87, 1974, 2602, 2704
Vha464I	CTTAAG	1 cut(s)	1607
VpaK11BI	GGWCC	2 cut(s)	373, 1539
XapI	RAATTY	5 cut(s)	140, 1406, 2470, 2728, 2914
XbaI	TCTAGA	1 cut(s)	1517
XceI	RCATGY	5 cut(s)	1036, 1484, 1562, 1852, 2726
XhoI	CTCGAG	1 cut(s)	3311
XmiI	GTMKAC	1 cut(s)	1613
XmnI	GAANNNNTTC	6 cut(s)	1083, 1136, 1686, 1799, 1914, 2532
Zsp2I	ATGCAT	2 cut(s)	1854, 2724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.