Chloroplastic group IIA intron splicing facilitator CRS1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01370 |
| fragaria_vesca | FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 |
| malus_domestica | MD17G1040600.v1.1 |
| prunus_persica | Prupe.3G278400_v2.0.a1 |
| pyrus_communis | pycom17g03640 |
| rosa_chinensis | RchiOBHm_Chr2g0170301 |
| rosa_laevigata | RLG00000021945 |
| rosa_multiflora | Rmu_co8444867.1_g000001 Rmu_sc0012445.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00081450 |
| rosa_rugosa | Rorug02G0548100 |
| rosa_samantha | Rh2AG619400 Rh2BG630300 Rh2CG600400 Rh2DG643200 |
| rosa_wichuraiana | Rw2G051310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2915 |
| AatII | GACGTC | 1 cut(s) | 2944 |
| Acc36I | ACCTGC | 2 cut(s) | 415, 2915 |
| AccB1I | GGYRCC | 1 cut(s) | 352 |
| AccI | GTMKAC | 1 cut(s) | 1759 |
| AccII | CGCG | 2 cut(s) | 306, 1012 |
| AccIII | TCCGGA | 1 cut(s) | 126 |
| AclI | AACGTT | 1 cut(s) | 2867 |
| AclWI | GGATC | 3 cut(s) | 883, 2825, 2845 |
| AcoI | YGGCCR | 1 cut(s) | 477 |
| AcsI | RAATTY | 3 cut(s) | 116, 1364, 2410 |
| AcuI | CTGAAG | 6 cut(s) | 996, 1335, 1716, 2039, 2826, 3255 |
| AcyI | GRCGYC | 1 cut(s) | 2941 |
| AfaI | GTAC | 2 cut(s) | 302, 2321 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 283, 362, 368, 1052, 1155, 1753, 3053, 3171 |
| AflIII | ACRYGT | 1 cut(s) | 2570 |
| AjnI | CCWGG | 8 cut(s) | 955, 1078, 1508, 2368, 2833, 2996, 3327, 3379 |
| Alw21I | GWGCWC | 6 cut(s) | 134, 338, 901, 1821, 2182, 2281 |
| AlwI | GGATC | 3 cut(s) | 883, 2825, 2845 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2162, 2609, 3425 |
| Ama87I | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| Aor13HI | TCCGGA | 1 cut(s) | 126 |
| AoxI | GGCC | 4 cut(s) | 477, 1007, 1970, 2994 |
| ApeKI | GCWGC | 4 cut(s) | 198, 1120, 1223, 3419 |
| ApoI | RAATTY | 3 cut(s) | 116, 1364, 2410 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 258, 290, 658, 690 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1742 |
| AspLEI | GCGC | 1 cut(s) | 3214 |
| AspS9I | GGNCC | 3 cut(s) | 366, 1007, 1057 |
| AsuC2I | CCSGG | 4 cut(s) | 363, 370, 1520, 2405 |
| AsuHPI | GGTGA | 6 cut(s) | 11, 824, 1556, 2134, 2324, 2603 |
| AvaI | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| AvaII | GGWCC | 2 cut(s) | 366, 1057 |
| BaeGI | GKGCMC | 1 cut(s) | 315 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 284, 317 |
| BanI | GGYRCC | 1 cut(s) | 352 |
| BanII | GRGCYC | 3 cut(s) | 134, 901, 1821 |
| BbsI | GAAGAC | 2 cut(s) | 225, 2367 |
| Bbv12I | GWGCWC | 6 cut(s) | 134, 338, 901, 1821, 2182, 2281 |
| BbvCI | CCTCAGC | 2 cut(s) | 410, 506 |
| BbvI | GCAGC | 4 cut(s) | 210, 1132, 1210, 3431 |
| BceAI | ACGGC | 2 cut(s) | 1506, 3149 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3073, 3107 |
| BciT130I | CCWGG | 8 cut(s) | 957, 1080, 1510, 2370, 2835, 2998, 3329, 3381 |
| BciVI | GTATCC | 2 cut(s) | 768, 1076 |
| BcnI | CCSGG | 4 cut(s) | 363, 370, 1520, 2405 |
| BfaI | CTAG | 4 cut(s) | 1634, 2223, 2457, 2691 |
| BfmI | CTRYAG | 3 cut(s) | 870, 1404, 2922 |
| BfuAI | ACCTGC | 2 cut(s) | 415, 2915 |
| BfuI | GTATCC | 2 cut(s) | 768, 1076 |
| BglII | AGATCT | 1 cut(s) | 3014 |
| BisI | GCNGC | 8 cut(s) | 138, 199, 1010, 1121, 1224, 1400, 3420, 3447 |
| BlpI | GCTNAGC | 3 cut(s) | 501, 900, 1860 |
| BlsI | GCNGC | 8 cut(s) | 139, 200, 1011, 1122, 1225, 1401, 3421, 3448 |
| Bme18I | GGWCC | 2 cut(s) | 366, 1057 |
| BmeT110I | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| BmgT120I | GGNCC | 3 cut(s) | 366, 1007, 1057 |
| BmiI | GGNNCC | 6 cut(s) | 354, 360, 367, 1058, 2367, 3333 |
| BmsI | GCATC | 6 cut(s) | 313, 817, 843, 1804, 3235, 3481 |
| BpiI | GAAGAC | 2 cut(s) | 225, 2367 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2777, 2809, 3214, 3246 |
| BpmI | CTGGAG | 5 cut(s) | 352, 714, 1356, 1664, 3317 |
| Bpu10I | CCTNAGC | 4 cut(s) | 410, 506, 1125, 1715 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 501, 900, 1860 |
| BpuEI | CTTGAG | 2 cut(s) | 3122, 3479 |
| BpuMI | CCSGG | 4 cut(s) | 363, 370, 1520, 2405 |
| Bsa29I | ATCGAT | 1 cut(s) | 321 |
| BsaHI | GRCGYC | 1 cut(s) | 2941 |
| BsaI | GGTCTC | 4 cut(s) | 1084, 1978, 2330, 3079 |
| BsaJI | CCNNGG | 8 cut(s) | 202, 362, 1010, 2369, 2403, 2997, 3327, 3498 |
| BsaWI | WCCGGW | 2 cut(s) | 126, 349 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 239, 269, 687, 717 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 283, 362, 368, 1052, 1155, 1753, 3053, 3171 |
| Bse118I | RCCGGY | 1 cut(s) | 260 |
| Bse1I | ACTGG | 8 cut(s) | 697, 1339, 2359, 2603, 2824, 3041, 3193, 3300 |
| Bse3DI | GCAATG | 1 cut(s) | 1597 |
| BseAI | TCCGGA | 1 cut(s) | 126 |
| BseBI | CCWGG | 8 cut(s) | 957, 1080, 1510, 2370, 2835, 2998, 3329, 3381 |
| BseCI | ATCGAT | 1 cut(s) | 321 |
| BseDI | CCNNGG | 8 cut(s) | 202, 362, 1010, 2369, 2403, 2997, 3327, 3498 |
| BseGI | GGATG | 7 cut(s) | 171, 705, 2263, 2587, 2860, 2884, 3226 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 283, 362, 368, 1052, 1155, 1753, 3053, 3171 |
| BseMI | GCAATG | 1 cut(s) | 1597 |
| BseMII | CTCAG | 9 cut(s) | 401, 492, 497, 564, 914, 1874, 2003, 2310, 2936 |
| BseNI | ACTGG | 8 cut(s) | 697, 1339, 2359, 2603, 2824, 3041, 3193, 3300 |
| BseRI | GAGGAG | 8 cut(s) | 22, 415, 427, 446, 473, 1779, 2132, 2363 |
| BseSI | GKGCMC | 1 cut(s) | 315 |
| BseXI | GCAGC | 4 cut(s) | 210, 1132, 1210, 3431 |
| BseYI | CCCAGC | 3 cut(s) | 563, 1662, 1775 |
| BsgI | GTGCAG | 1 cut(s) | 3387 |
| Bsh1236I | CGCG | 2 cut(s) | 306, 1012 |
| BshFI | GGCC | 4 cut(s) | 479, 1009, 1972, 2996 |
| BshNI | GGYRCC | 1 cut(s) | 352 |
| BshVI | ATCGAT | 1 cut(s) | 321 |
| BsiHKAI | GWGCWC | 6 cut(s) | 134, 338, 901, 1821, 2182, 2281 |
| BsiHKCI | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| BslFI | GGGAC | 7 cut(s) | 260, 379, 1014, 1070, 1370, 1644, 1792 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 283, 362, 368, 1052, 1155, 1753, 3053, 3171 |
| BsmFI | GGGAC | 7 cut(s) | 260, 379, 1014, 1070, 1370, 1644, 1792 |
| BsnI | GGCC | 4 cut(s) | 479, 1009, 1972, 2996 |
| Bso31I | GGTCTC | 4 cut(s) | 1084, 1978, 2330, 3079 |
| BsoBI | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| Bsp1286I | GDGCHC | 7 cut(s) | 134, 315, 338, 901, 1821, 2182, 2281 |
| Bsp13I | TCCGGA | 1 cut(s) | 126 |
| Bsp143I | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 501, 900, 1860 |
| BspANI | GGCC | 4 cut(s) | 479, 1009, 1972, 2996 |
| BspCNI | CTCAG | 9 cut(s) | 402, 493, 498, 565, 913, 1873, 2002, 2309, 2937 |
| BspDI | ATCGAT | 1 cut(s) | 321 |
| BspEI | TCCGGA | 1 cut(s) | 126 |
| BspFNI | CGCG | 2 cut(s) | 306, 1012 |
| BspHI | TCATGA | 6 cut(s) | 391, 595, 670, 784, 2283, 2517 |
| BspLI | GGNNCC | 6 cut(s) | 354, 360, 367, 1058, 2367, 3333 |
| BspMAI | CTGCAG | 2 cut(s) | 1408, 2926 |
| BspMI | ACCTGC | 2 cut(s) | 415, 2915 |
| BspPI | GGATC | 3 cut(s) | 883, 2825, 2845 |
| BspQI | GCTCTTC | 1 cut(s) | 1419 |
| BspT107I | GGYRCC | 1 cut(s) | 352 |
| BspTNI | GGTCTC | 4 cut(s) | 1084, 1978, 2330, 3079 |
| BsrDI | GCAATG | 1 cut(s) | 1597 |
| BsrFI | RCCGGY | 1 cut(s) | 260 |
| BsrI | ACTGG | 8 cut(s) | 697, 1339, 2359, 2603, 2824, 3041, 3193, 3300 |
| BssAI | RCCGGY | 1 cut(s) | 260 |
| BssECI | CCNNGG | 8 cut(s) | 202, 362, 1010, 2369, 2403, 2997, 3327, 3498 |
| BssMI | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| BssNI | GRCGYC | 1 cut(s) | 2941 |
| Bst2UI | CCWGG | 8 cut(s) | 957, 1080, 1510, 2370, 2835, 2998, 3329, 3381 |
| Bst4CI | ACNGT | 4 cut(s) | 523, 2324, 3107, 3499 |
| Bst6I | CTCTTC | 9 cut(s) | 656, 1311, 1319, 1419, 1692, 2202, 2335, 2569, 2800 |
| BstACI | GRCGYC | 1 cut(s) | 2941 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 971, 3311 |
| BstDSI | CCRYGG | 2 cut(s) | 1010, 3498 |
| BstF5I | GGATG | 7 cut(s) | 171, 705, 2263, 2587, 2860, 2884, 3226 |
| BstFNI | CGCG | 2 cut(s) | 306, 1012 |
| BstHHI | GCGC | 1 cut(s) | 3214 |
| BstKTI | GATC | 6 cut(s) | 614, 878, 1537, 2833, 2840, 3017 |
| BstMBI | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| BstNI | CCWGG | 8 cut(s) | 957, 1080, 1510, 2370, 2835, 2998, 3329, 3381 |
| BstNSI | RCATGY | 2 cut(s) | 1795, 3079 |
| BstSFI | CTRYAG | 3 cut(s) | 870, 1404, 2922 |
| BstSLI | GKGCMC | 1 cut(s) | 315 |
| BstUI | CGCG | 2 cut(s) | 306, 1012 |
| BstV1I | GCAGC | 4 cut(s) | 210, 1132, 1210, 3431 |
| BstV2I | GAAGAC | 2 cut(s) | 225, 2367 |
| BstX2I | RGATCY | 2 cut(s) | 2837, 3014 |
| BstYI | RGATCY | 2 cut(s) | 2837, 3014 |
| Bsu15I | ATCGAT | 1 cut(s) | 321 |
| BsuI | GTATCC | 2 cut(s) | 768, 1076 |
| BsuRI | GGCC | 4 cut(s) | 479, 1009, 1972, 2996 |
| BsuTUI | ATCGAT | 1 cut(s) | 321 |
| BtgI | CCRYGG | 2 cut(s) | 1010, 3498 |
| BtsCI | GGATG | 7 cut(s) | 171, 705, 2263, 2587, 2860, 2884, 3226 |
| BtsI | GCAGTG | 1 cut(s) | 1917 |
| BtsIMutI | CAGTG | 5 cut(s) | 844, 1917, 2015, 3048, 3112 |
| BveI | ACCTGC | 2 cut(s) | 415, 2915 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2162, 2609, 3425 |
| CciI | TCATGA | 6 cut(s) | 391, 595, 670, 784, 2283, 2517 |
| CfoI | GCGC | 1 cut(s) | 3214 |
| Cfr10I | RCCGGY | 1 cut(s) | 260 |
| Cfr13I | GGNCC | 3 cut(s) | 366, 1007, 1057 |
| Cfr42I | CCGCGG | 1 cut(s) | 1013 |
| ClaI | ATCGAT | 1 cut(s) | 321 |
| CseI | GACGC | 2 cut(s) | 295, 2030 |
| Csp6I | GTAC | 2 cut(s) | 301, 2320 |
| CviQI | GTAC | 2 cut(s) | 301, 2320 |
| DpnI | GATC | 6 cut(s) | 613, 877, 1536, 2832, 2839, 3016 |
| DpnII | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| DraI | TTTAAA | 3 cut(s) | 2070, 2730, 3292 |
| EaeI | YGGCCR | 1 cut(s) | 477 |
| Eam1104I | CTCTTC | 9 cut(s) | 656, 1311, 1319, 1419, 1692, 2202, 2335, 2569, 2800 |
| EarI | CTCTTC | 9 cut(s) | 656, 1311, 1319, 1419, 1692, 2202, 2335, 2569, 2800 |
| EciI | GGCGGA | 5 cut(s) | 124, 157, 247, 622, 1088 |
| Ecl136II | GAGCTC | 3 cut(s) | 132, 899, 1819 |
| Eco24I | GRGCYC | 3 cut(s) | 134, 901, 1821 |
| Eco31I | GGTCTC | 4 cut(s) | 1084, 1978, 2330, 3079 |
| Eco32I | GATATC | 1 cut(s) | 2154 |
| Eco47I | GGWCC | 2 cut(s) | 366, 1057 |
| Eco53kI | GAGCTC | 3 cut(s) | 132, 899, 1819 |
| Eco57I | CTGAAG | 6 cut(s) | 996, 1335, 1716, 2039, 2826, 3255 |
| Eco88I | CYCGRG | 3 cut(s) | 203, 1353, 3082 |
| EcoICRI | GAGCTC | 3 cut(s) | 132, 899, 1819 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1057 |
| EcoRII | CCWGG | 8 cut(s) | 955, 1078, 1508, 2368, 2833, 2996, 3327, 3379 |
| EcoRV | GATATC | 1 cut(s) | 2154 |
| EcoT22I | ATGCAT | 1 cut(s) | 1797 |
| EcoT38I | GRGCYC | 3 cut(s) | 134, 901, 1821 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1712, 1744, 2226, 2258, 3200, 3232, 3333, 3365 |
| FaqI | GGGAC | 7 cut(s) | 260, 379, 1014, 1070, 1370, 1644, 1792 |
| FauI | CCCGC | 3 cut(s) | 34, 48, 765 |
| FblI | GTMKAC | 1 cut(s) | 1759 |
| Fnu4HI | GCNGC | 8 cut(s) | 138, 199, 1010, 1121, 1224, 1400, 3420, 3447 |
| FokI | GGATG | 7 cut(s) | 158, 712, 2270, 2594, 2847, 2891, 3213 |
| FriOI | GRGCYC | 3 cut(s) | 134, 901, 1821 |
| Fsp4HI | GCNGC | 8 cut(s) | 138, 199, 1010, 1121, 1224, 1400, 3420, 3447 |
| FspBI | CTAG | 4 cut(s) | 1634, 2223, 2457, 2691 |
| GlaI | GCGC | 1 cut(s) | 3213 |
| GluI | GCNGC | 8 cut(s) | 138, 199, 1010, 1121, 1224, 1400, 3420, 3447 |
| GsaI | CCCAGC | 3 cut(s) | 567, 1666, 1779 |
| GsuI | CTGGAG | 5 cut(s) | 352, 714, 1356, 1664, 3317 |
| HaeIII | GGCC | 4 cut(s) | 479, 1009, 1972, 2996 |
| HgaI | GACGC | 2 cut(s) | 295, 2030 |
| HhaI | GCGC | 1 cut(s) | 3214 |
| Hin1I | GRCGYC | 1 cut(s) | 2941 |
| Hin6I | GCGC | 1 cut(s) | 3212 |
| HinP1I | GCGC | 1 cut(s) | 3212 |
| HincII | GTYRAC | 2 cut(s) | 1051, 2965 |
| HindII | GTYRAC | 2 cut(s) | 1051, 2965 |
| HindIII | AAGCTT | 3 cut(s) | 1208, 2072, 2898 |
| HphI | GGTGA | 6 cut(s) | 11, 824, 1556, 2134, 2324, 2603 |
| Hpy166II | GTNNAC | 7 cut(s) | 1017, 1051, 1564, 1760, 2125, 2965, 3470 |
| Hpy8I | GTNNAC | 7 cut(s) | 1017, 1051, 1564, 1760, 2125, 2965, 3470 |
| Hpy99I | CGWCG | 2 cut(s) | 311, 2046 |
| HpyCH4III | ACNGT | 4 cut(s) | 523, 2324, 3107, 3499 |
| HpyCH4IV | ACGT | 3 cut(s) | 2570, 2867, 2941 |
| HpySE526I | ACGT | 3 cut(s) | 2570, 2867, 2941 |
| Hsp92I | GRCGYC | 1 cut(s) | 2941 |
| HspAI | GCGC | 1 cut(s) | 3212 |
| Kpn2I | TCCGGA | 1 cut(s) | 126 |
| KroI | GCCGGC | 1 cut(s) | 260 |
| KroNI | GCCGGC | 1 cut(s) | 262 |
| KspI | CCGCGG | 1 cut(s) | 1013 |
| Kzo9I | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| LguI | GCTCTTC | 1 cut(s) | 1419 |
| Lsp1109I | GCAGC | 4 cut(s) | 210, 1132, 1210, 3431 |
| LweI | GCATC | 6 cut(s) | 313, 817, 843, 1804, 3235, 3481 |
| MaeI | CTAG | 4 cut(s) | 1634, 2223, 2457, 2691 |
| MaeII | ACGT | 3 cut(s) | 2570, 2867, 2941 |
| MaeIII | GTNAC | 7 cut(s) | 1546, 2245, 2396, 2623, 2713, 2845, 3184 |
| MalI | GATC | 6 cut(s) | 613, 877, 1536, 2832, 2839, 3016 |
| MboI | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| MfeI | CAATTG | 4 cut(s) | 1782, 2102, 2850, 2958 |
| MflI | RGATCY | 2 cut(s) | 2837, 3014 |
| MhlI | GDGCHC | 7 cut(s) | 134, 315, 338, 901, 1821, 2182, 2281 |
| MlyI | GAGTC | 9 cut(s) | 230, 661, 1666, 1892, 2057, 2393, 2518, 2710, 3011 |
| Mph1103I | ATGCAT | 1 cut(s) | 1797 |
| MreI | CGCCGGCG | 1 cut(s) | 260 |
| MroI | TCCGGA | 1 cut(s) | 126 |
| MroNI | GCCGGC | 1 cut(s) | 260 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1742 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2486 |
| MspA1I | CMGCKG | 2 cut(s) | 330, 1012 |
| MunI | CAATTG | 4 cut(s) | 1782, 2102, 2850, 2958 |
| MvaI | CCWGG | 8 cut(s) | 957, 1080, 1510, 2370, 2835, 2998, 3329, 3381 |
| MvnI | CGCG | 2 cut(s) | 306, 1012 |
| NaeI | GCCGGC | 1 cut(s) | 262 |
| NciI | CCSGG | 4 cut(s) | 363, 370, 1520, 2405 |
| NdeII | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| NgoMIV | GCCGGC | 1 cut(s) | 260 |
| NlaIV | GGNNCC | 6 cut(s) | 354, 360, 367, 1058, 2367, 3333 |
| NmeAIII | GCCGAG | 2 cut(s) | 211, 505 |
| NmuCI | GTSAC | 3 cut(s) | 2245, 2396, 2713 |
| NsiI | ATGCAT | 1 cut(s) | 1797 |
| NspI | RCATGY | 2 cut(s) | 1795, 3079 |
| PaeR7I | CTCGAG | 1 cut(s) | 3082 |
| PagI | TCATGA | 6 cut(s) | 391, 595, 670, 784, 2283, 2517 |
| PaqCI | CACCTGC | 1 cut(s) | 2915 |
| PciSI | GCTCTTC | 1 cut(s) | 1419 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 210 |
| PdiI | GCCGGC | 1 cut(s) | 262 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1742 |
| PfoI | TCCNGGA | 3 cut(s) | 1508, 2833, 3379 |
| PkrI | GCNGC | 8 cut(s) | 139, 200, 1011, 1122, 1225, 1401, 3421, 3448 |
| PleI | GAGTC | 9 cut(s) | 230, 661, 1665, 1891, 2056, 2393, 2517, 2710, 3010 |
| PpsI | GAGTC | 9 cut(s) | 230, 661, 1665, 1891, 2056, 2393, 2517, 2710, 3010 |
| PpuMI | RGGWCCY | 1 cut(s) | 1057 |
| Psp124BI | GAGCTC | 3 cut(s) | 134, 901, 1821 |
| Psp1406I | AACGTT | 1 cut(s) | 2867 |
| Psp5II | RGGWCCY | 1 cut(s) | 1057 |
| Psp6I | CCWGG | 8 cut(s) | 955, 1078, 1508, 2368, 2833, 2996, 3327, 3379 |
| PspFI | CCCAGC | 3 cut(s) | 563, 1662, 1775 |
| PspGI | CCWGG | 8 cut(s) | 955, 1078, 1508, 2368, 2833, 2996, 3327, 3379 |
| PspN4I | GGNNCC | 6 cut(s) | 354, 360, 367, 1058, 2367, 3333 |
| PspPI | GGNCC | 3 cut(s) | 366, 1007, 1057 |
| PspPPI | RGGWCCY | 1 cut(s) | 1057 |
| PstI | CTGCAG | 2 cut(s) | 1408, 2926 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2162, 2609, 3425 |
| PsuI | RGATCY | 2 cut(s) | 2837, 3014 |
| PvuII | CAGCTG | 1 cut(s) | 330 |
| RsaI | GTAC | 2 cut(s) | 302, 2321 |
| RsaNI | GTAC | 2 cut(s) | 301, 2320 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2486 |
| SacI | GAGCTC | 3 cut(s) | 134, 901, 1821 |
| SacII | CCGCGG | 1 cut(s) | 1013 |
| SapI | GCTCTTC | 1 cut(s) | 1419 |
| SatI | GCNGC | 8 cut(s) | 138, 199, 1010, 1121, 1224, 1400, 3420, 3447 |
| Sau3AI | GATC | 6 cut(s) | 611, 875, 1534, 2830, 2837, 3014 |
| Sau96I | GGNCC | 3 cut(s) | 366, 1007, 1057 |
| SbfI | CCTGCAGG | 1 cut(s) | 2926 |
| SchI | GAGTC | 9 cut(s) | 230, 661, 1666, 1892, 2057, 2393, 2518, 2710, 3011 |
| SdaI | CCTGCAGG | 1 cut(s) | 2926 |
| SduI | GDGCHC | 7 cut(s) | 134, 315, 338, 901, 1821, 2182, 2281 |
| SfaNI | GCATC | 6 cut(s) | 313, 817, 843, 1804, 3235, 3481 |
| SfcI | CTRYAG | 3 cut(s) | 870, 1404, 2922 |
| Sfr274I | CTCGAG | 1 cut(s) | 3082 |
| Sfr303I | CCGCGG | 1 cut(s) | 1013 |
| SgrAI | CRCCGGYG | 1 cut(s) | 260 |
| SgrBI | CCGCGG | 1 cut(s) | 1013 |
| SinI | GGWCC | 2 cut(s) | 366, 1057 |
| SlaI | CTCGAG | 1 cut(s) | 3082 |
| SmiI | ATTTAAAT | 1 cut(s) | 2730 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2486 |
| SmlI | CTYRAG | 3 cut(s) | 3082, 3137, 3458 |
| SmoI | CTYRAG | 3 cut(s) | 3082, 3137, 3458 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2926 |
| SspI | AATATT | 1 cut(s) | 3181 |
| SspMI | CTAG | 4 cut(s) | 1634, 2223, 2457, 2691 |
| SstI | GAGCTC | 3 cut(s) | 134, 901, 1821 |
| SwaI | ATTTAAAT | 1 cut(s) | 2730 |
| TaaI | ACNGT | 4 cut(s) | 523, 2324, 3107, 3499 |
| TaiI | ACGT | 3 cut(s) | 2573, 2870, 2944 |
| TaqI | TCGA | 4 cut(s) | 321, 383, 2333, 3083 |
| TauI | GCSGC | 4 cut(s) | 140, 1012, 1402, 3449 |
| TscAI | CASTG | 5 cut(s) | 844, 1917, 2022, 3048, 3112 |
| TseFI | GTSAC | 3 cut(s) | 2245, 2396, 2713 |
| TseI | GCWGC | 4 cut(s) | 198, 1120, 1223, 3419 |
| Tsp45I | GTSAC | 3 cut(s) | 2245, 2396, 2713 |
| TspGWI | ACGGA | 2 cut(s) | 1098, 2611 |
| TspRI | CASTG | 5 cut(s) | 844, 1917, 2022, 3048, 3112 |
| VpaK11BI | GGWCC | 2 cut(s) | 366, 1057 |
| XapI | RAATTY | 3 cut(s) | 116, 1364, 2410 |
| XceI | RCATGY | 2 cut(s) | 1795, 3079 |
| XhoI | CTCGAG | 1 cut(s) | 3082 |
| XmiI | GTMKAC | 1 cut(s) | 1759 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1742 |
| XspI | CTAG | 4 cut(s) | 1634, 2223, 2457, 2691 |
| ZraI | GACGTC | 1 cut(s) | 2942 |
| Zsp2I | ATGCAT | 1 cut(s) | 1797 |