Chloroplastic group IIA intron splicing facilitator CRS1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01370 |
| fragaria_vesca | FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 FvH4_6g50050 |
| malus_domestica | MD17G1040600.v1.1 |
| prunus_persica | Prupe.3G278400_v2.0.a1 |
| pyrus_communis | pycom17g03640 |
| rosa_chinensis | RchiOBHm_Chr2g0170301 |
| rosa_laevigata | RLG00000021945 |
| rosa_multiflora | Rmu_co8444867.1_g000001 Rmu_sc0012445.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00081450 |
| rosa_rugosa | Rorug02G0548100 |
| rosa_samantha | Rh2AG619400 Rh2BG630300 Rh2CG600400 Rh2DG643200 |
| rosa_wichuraiana | Rw2G051310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 412 |
| AccB1I | GGYRCC | 1 cut(s) | 349 |
| AccI | GTMKAC | 2 cut(s) | 1574, 1777 |
| AccII | CGCG | 2 cut(s) | 303, 1009 |
| AccIII | TCCGGA | 1 cut(s) | 123 |
| AclI | AACGTT | 1 cut(s) | 2939 |
| AclWI | GGATC | 3 cut(s) | 880, 2897, 2917 |
| AcoI | YGGCCR | 1 cut(s) | 474 |
| AcsI | RAATTY | 3 cut(s) | 113, 1361, 2482 |
| AcuI | CTGAAG | 7 cut(s) | 993, 1332, 1734, 2057, 2898, 3015, 3327 |
| AfaI | GTAC | 2 cut(s) | 299, 2393 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 280, 359, 365, 1049, 1152, 1771, 3125, 3243 |
| AflIII | ACRYGT | 1 cut(s) | 2642 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1542 |
| AjnI | CCWGG | 7 cut(s) | 952, 1075, 1505, 2440, 2905, 3399, 3451 |
| AleI | CACNNNNGTG | 1 cut(s) | 834 |
| Alw21I | GWGCWC | 6 cut(s) | 131, 335, 898, 1839, 2254, 2353 |
| AlwI | GGATC | 3 cut(s) | 880, 2897, 2917 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2234, 2681 |
| Ama87I | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| Aor13HI | TCCGGA | 1 cut(s) | 123 |
| AoxI | GGCC | 4 cut(s) | 474, 1004, 1988, 3066 |
| ApeKI | GCWGC | 6 cut(s) | 195, 1117, 1220, 1583, 1586, 3491 |
| ApoI | RAATTY | 3 cut(s) | 113, 1361, 2482 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 255, 287, 655, 687 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1760 |
| AspLEI | GCGC | 2 cut(s) | 817, 2144 |
| AspS9I | GGNCC | 5 cut(s) | 363, 1004, 1054, 1495, 3067 |
| AsuC2I | CCSGG | 6 cut(s) | 360, 367, 1517, 2477, 3070, 3071 |
| AsuHPI | GGTGA | 6 cut(s) | 11, 754, 821, 968, 2206, 2396 |
| AvaI | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| AvaII | GGWCC | 3 cut(s) | 363, 1054, 1495 |
| BaeGI | GKGCMC | 1 cut(s) | 312 |
| BanI | GGYRCC | 1 cut(s) | 349 |
| BanII | GRGCYC | 3 cut(s) | 131, 898, 1839 |
| BbsI | GAAGAC | 3 cut(s) | 219, 1538, 2439 |
| Bbv12I | GWGCWC | 6 cut(s) | 131, 335, 898, 1839, 2254, 2353 |
| BbvCI | CCTCAGC | 2 cut(s) | 407, 503 |
| BbvI | GCAGC | 6 cut(s) | 207, 1129, 1207, 1573, 1595, 3478 |
| BceAI | ACGGC | 2 cut(s) | 1503, 3221 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3145, 3179, 3264, 3298 |
| BciT130I | CCWGG | 7 cut(s) | 954, 1077, 1507, 2442, 2907, 3401, 3453 |
| BciVI | GTATCC | 2 cut(s) | 765, 1073 |
| BcnI | CCSGG | 6 cut(s) | 360, 367, 1517, 2477, 3070, 3071 |
| BfaI | CTAG | 3 cut(s) | 1652, 2529, 2763 |
| BfmI | CTRYAG | 2 cut(s) | 867, 1401 |
| BfuAI | ACCTGC | 1 cut(s) | 412 |
| BfuI | GTATCC | 2 cut(s) | 765, 1073 |
| BglII | AGATCT | 1 cut(s) | 3086 |
| BlpI | GCTNAGC | 3 cut(s) | 498, 897, 1878 |
| Bme18I | GGWCC | 3 cut(s) | 363, 1054, 1495 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1542 |
| BmeT110I | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| BmgT120I | GGNCC | 5 cut(s) | 363, 1004, 1054, 1495, 3067 |
| BmiI | GGNNCC | 6 cut(s) | 351, 357, 364, 1055, 2439, 3405 |
| BmsI | GCATC | 6 cut(s) | 310, 802, 814, 1822, 3307, 3553 |
| BpiI | GAAGAC | 3 cut(s) | 219, 1538, 2439 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2849, 2881, 3286, 3318 |
| BpmI | CTGGAG | 5 cut(s) | 349, 711, 1353, 1682, 3389 |
| Bpu10I | CCTNAGC | 4 cut(s) | 407, 503, 1122, 1733 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 498, 897, 1878 |
| BpuEI | CTTGAG | 2 cut(s) | 3194, 3551 |
| BpuMI | CCSGG | 6 cut(s) | 360, 367, 1517, 2477, 3070, 3071 |
| Bsa29I | ATCGAT | 1 cut(s) | 318 |
| BsaI | GGTCTC | 4 cut(s) | 1081, 1996, 2402, 3151 |
| BsaJI | CCNNGG | 9 cut(s) | 199, 359, 1007, 1614, 2441, 2475, 3069, 3399, 3570 |
| BsaWI | WCCGGW | 2 cut(s) | 123, 346 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 236, 266, 684, 714, 2505, 2535 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 280, 359, 365, 1049, 1152, 1771, 3125, 3243 |
| Bse118I | RCCGGY | 1 cut(s) | 257 |
| BseAI | TCCGGA | 1 cut(s) | 123 |
| BseBI | CCWGG | 7 cut(s) | 954, 1077, 1507, 2442, 2907, 3401, 3453 |
| BseCI | ATCGAT | 1 cut(s) | 318 |
| BseDI | CCNNGG | 9 cut(s) | 199, 359, 1007, 1614, 2441, 2475, 3069, 3399, 3570 |
| BseGI | GGATG | 8 cut(s) | 168, 702, 829, 2335, 2659, 2932, 2956, 3298 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 280, 359, 365, 1049, 1152, 1771, 3125, 3243 |
| BseRI | GAGGAG | 7 cut(s) | 22, 412, 424, 443, 1797, 2204, 2435 |
| BseSI | GKGCMC | 1 cut(s) | 312 |
| BseXI | GCAGC | 6 cut(s) | 207, 1129, 1207, 1573, 1595, 3478 |
| BseYI | CCCAGC | 3 cut(s) | 560, 1680, 1793 |
| BsgI | GTGCAG | 1 cut(s) | 3459 |
| Bsh1236I | CGCG | 2 cut(s) | 303, 1009 |
| BshFI | GGCC | 4 cut(s) | 476, 1006, 1990, 3068 |
| BshNI | GGYRCC | 1 cut(s) | 349 |
| BshVI | ATCGAT | 1 cut(s) | 318 |
| BsiHKAI | GWGCWC | 6 cut(s) | 131, 335, 898, 1839, 2254, 2353 |
| BsiHKCI | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| BslFI | GGGAC | 7 cut(s) | 257, 376, 1011, 1067, 1367, 1662, 1810 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 280, 359, 365, 1049, 1152, 1771, 3125, 3243 |
| BsmFI | GGGAC | 7 cut(s) | 257, 376, 1011, 1067, 1367, 1662, 1810 |
| BsnI | GGCC | 4 cut(s) | 476, 1006, 1990, 3068 |
| Bso31I | GGTCTC | 4 cut(s) | 1081, 1996, 2402, 3151 |
| BsoBI | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| Bsp1286I | GDGCHC | 7 cut(s) | 131, 312, 335, 898, 1839, 2254, 2353 |
| Bsp13I | TCCGGA | 1 cut(s) | 123 |
| Bsp143I | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 498, 897, 1878 |
| Bsp19I | CCATGG | 1 cut(s) | 1614 |
| BspANI | GGCC | 4 cut(s) | 476, 1006, 1990, 3068 |
| BspDI | ATCGAT | 1 cut(s) | 318 |
| BspEI | TCCGGA | 1 cut(s) | 123 |
| BspFNI | CGCG | 2 cut(s) | 303, 1009 |
| BspHI | TCATGA | 5 cut(s) | 388, 592, 781, 2355, 2589 |
| BspLI | GGNNCC | 6 cut(s) | 351, 357, 364, 1055, 2439, 3405 |
| BspMAI | CTGCAG | 1 cut(s) | 1405 |
| BspMI | ACCTGC | 1 cut(s) | 412 |
| BspPI | GGATC | 3 cut(s) | 880, 2897, 2917 |
| BspQI | GCTCTTC | 1 cut(s) | 1416 |
| BspT107I | GGYRCC | 1 cut(s) | 349 |
| BspTNI | GGTCTC | 4 cut(s) | 1081, 1996, 2402, 3151 |
| BsrFI | RCCGGY | 1 cut(s) | 257 |
| BssAI | RCCGGY | 1 cut(s) | 257 |
| BssECI | CCNNGG | 9 cut(s) | 199, 359, 1007, 1614, 2441, 2475, 3069, 3399, 3570 |
| BssMI | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| BssT1I | CCWWGG | 1 cut(s) | 1614 |
| Bst2UI | CCWGG | 7 cut(s) | 954, 1077, 1507, 2442, 2907, 3401, 3453 |
| Bst4CI | ACNGT | 4 cut(s) | 520, 2396, 3179, 3571 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 863, 968, 3383 |
| BstDSI | CCRYGG | 3 cut(s) | 1007, 1614, 3570 |
| BstF5I | GGATG | 8 cut(s) | 168, 702, 829, 2335, 2659, 2932, 2956, 3298 |
| BstFNI | CGCG | 2 cut(s) | 303, 1009 |
| BstHHI | GCGC | 2 cut(s) | 817, 2144 |
| BstKTI | GATC | 6 cut(s) | 611, 875, 1534, 2905, 2912, 3089 |
| BstMBI | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| BstNI | CCWGG | 7 cut(s) | 954, 1077, 1507, 2442, 2907, 3401, 3453 |
| BstNSI | RCATGY | 3 cut(s) | 1813, 2646, 3151 |
| BstSFI | CTRYAG | 2 cut(s) | 867, 1401 |
| BstSLI | GKGCMC | 1 cut(s) | 312 |
| BstUI | CGCG | 2 cut(s) | 303, 1009 |
| BstV1I | GCAGC | 6 cut(s) | 207, 1129, 1207, 1573, 1595, 3478 |
| BstV2I | GAAGAC | 3 cut(s) | 219, 1538, 2439 |
| BstX2I | RGATCY | 2 cut(s) | 2909, 3086 |
| BstYI | RGATCY | 2 cut(s) | 2909, 3086 |
| Bsu15I | ATCGAT | 1 cut(s) | 318 |
| BsuI | GTATCC | 2 cut(s) | 765, 1073 |
| BsuRI | GGCC | 4 cut(s) | 476, 1006, 1990, 3068 |
| BsuTUI | ATCGAT | 1 cut(s) | 318 |
| BtgI | CCRYGG | 3 cut(s) | 1007, 1614, 3570 |
| BtsCI | GGATG | 8 cut(s) | 168, 702, 829, 2335, 2659, 2932, 2956, 3298 |
| BtsI | GCAGTG | 1 cut(s) | 1935 |
| BtsIMutI | CAGTG | 5 cut(s) | 841, 1935, 2033, 3120, 3184 |
| BveI | ACCTGC | 1 cut(s) | 412 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2234, 2681 |
| CciI | TCATGA | 5 cut(s) | 388, 592, 781, 2355, 2589 |
| CfoI | GCGC | 2 cut(s) | 817, 2144 |
| Cfr10I | RCCGGY | 1 cut(s) | 257 |
| Cfr13I | GGNCC | 5 cut(s) | 363, 1004, 1054, 1495, 3067 |
| Cfr42I | CCGCGG | 1 cut(s) | 1010 |
| Cfr9I | CCCGGG | 1 cut(s) | 3069 |
| ClaI | ATCGAT | 1 cut(s) | 318 |
| CseI | GACGC | 2 cut(s) | 292, 2048 |
| Csp6I | GTAC | 2 cut(s) | 298, 2392 |
| CviQI | GTAC | 2 cut(s) | 298, 2392 |
| DpnI | GATC | 6 cut(s) | 610, 874, 1533, 2904, 2911, 3088 |
| DpnII | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| DraI | TTTAAA | 3 cut(s) | 2088, 2802, 3364 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1542 |
| EaeI | YGGCCR | 1 cut(s) | 474 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1542 |
| EciI | GGCGGA | 5 cut(s) | 121, 154, 244, 619, 1085 |
| Ecl136II | GAGCTC | 3 cut(s) | 129, 896, 1837 |
| Eco130I | CCWWGG | 1 cut(s) | 1614 |
| Eco24I | GRGCYC | 3 cut(s) | 131, 898, 1839 |
| Eco31I | GGTCTC | 4 cut(s) | 1081, 1996, 2402, 3151 |
| Eco32I | GATATC | 1 cut(s) | 2226 |
| Eco47I | GGWCC | 3 cut(s) | 363, 1054, 1495 |
| Eco53kI | GAGCTC | 3 cut(s) | 129, 896, 1837 |
| Eco57I | CTGAAG | 7 cut(s) | 993, 1332, 1734, 2057, 2898, 3015, 3327 |
| Eco88I | CYCGRG | 4 cut(s) | 200, 1350, 3069, 3154 |
| EcoICRI | GAGCTC | 3 cut(s) | 129, 896, 1837 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1054 |
| EcoRII | CCWGG | 7 cut(s) | 952, 1075, 1505, 2440, 2905, 3399, 3451 |
| EcoRV | GATATC | 1 cut(s) | 2226 |
| EcoT14I | CCWWGG | 1 cut(s) | 1614 |
| EcoT22I | ATGCAT | 1 cut(s) | 1815 |
| EcoT38I | GRGCYC | 3 cut(s) | 131, 898, 1839 |
| ErhI | CCWWGG | 1 cut(s) | 1614 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1730, 1762, 2298, 2330, 3272, 3304, 3405, 3437 |
| FaqI | GGGAC | 7 cut(s) | 257, 376, 1011, 1067, 1367, 1662, 1810 |
| FauI | CCCGC | 3 cut(s) | 34, 48, 762 |
| FblI | GTMKAC | 2 cut(s) | 1574, 1777 |
| FokI | GGATG | 8 cut(s) | 155, 709, 836, 2342, 2666, 2919, 2963, 3285 |
| FriOI | GRGCYC | 3 cut(s) | 131, 898, 1839 |
| FspBI | CTAG | 3 cut(s) | 1652, 2529, 2763 |
| GlaI | GCGC | 2 cut(s) | 816, 2143 |
| GsaI | CCCAGC | 3 cut(s) | 564, 1684, 1797 |
| GsuI | CTGGAG | 5 cut(s) | 349, 711, 1353, 1682, 3389 |
| HaeIII | GGCC | 4 cut(s) | 476, 1006, 1990, 3068 |
| HgaI | GACGC | 2 cut(s) | 292, 2048 |
| HhaI | GCGC | 2 cut(s) | 817, 2144 |
| Hin6I | GCGC | 2 cut(s) | 815, 2142 |
| HinP1I | GCGC | 2 cut(s) | 815, 2142 |
| HincII | GTYRAC | 2 cut(s) | 1048, 3037 |
| HindII | GTYRAC | 2 cut(s) | 1048, 3037 |
| HindIII | AAGCTT | 3 cut(s) | 1205, 2090, 2970 |
| HphI | GGTGA | 6 cut(s) | 11, 754, 821, 968, 2206, 2396 |
| Hpy166II | GTNNAC | 8 cut(s) | 745, 1014, 1048, 1575, 1778, 2197, 3037, 3542 |
| Hpy8I | GTNNAC | 8 cut(s) | 745, 1014, 1048, 1575, 1778, 2197, 3037, 3542 |
| Hpy99I | CGWCG | 2 cut(s) | 308, 2064 |
| HpyCH4III | ACNGT | 4 cut(s) | 520, 2396, 3179, 3571 |
| HpyCH4IV | ACGT | 1 cut(s) | 2939 |
| HpySE526I | ACGT | 1 cut(s) | 2939 |
| HspAI | GCGC | 2 cut(s) | 815, 2142 |
| Kpn2I | TCCGGA | 1 cut(s) | 123 |
| KroI | GCCGGC | 1 cut(s) | 257 |
| KroNI | GCCGGC | 1 cut(s) | 259 |
| KspI | CCGCGG | 1 cut(s) | 1010 |
| Kzo9I | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| LguI | GCTCTTC | 1 cut(s) | 1416 |
| Lsp1109I | GCAGC | 6 cut(s) | 207, 1129, 1207, 1573, 1595, 3478 |
| LweI | GCATC | 6 cut(s) | 310, 802, 814, 1822, 3307, 3553 |
| MaeI | CTAG | 3 cut(s) | 1652, 2529, 2763 |
| MaeII | ACGT | 1 cut(s) | 2939 |
| MaeIII | GTNAC | 4 cut(s) | 2317, 2695, 2917, 3256 |
| MalI | GATC | 6 cut(s) | 610, 874, 1533, 2904, 2911, 3088 |
| MboI | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| MfeI | CAATTG | 4 cut(s) | 1800, 2120, 2922, 3030 |
| MflI | RGATCY | 2 cut(s) | 2909, 3086 |
| MhlI | GDGCHC | 7 cut(s) | 131, 312, 335, 898, 1839, 2254, 2353 |
| MlyI | GAGTC | 9 cut(s) | 227, 280, 658, 1684, 1910, 2075, 2590, 2782, 3083 |
| MmeI | TCCRAC | 9 cut(s) | 196, 414, 657, 905, 2491, 2725, 2788, 2960, 3198 |
| Mph1103I | ATGCAT | 1 cut(s) | 1815 |
| MreI | CGCCGGCG | 1 cut(s) | 257 |
| MroI | TCCGGA | 1 cut(s) | 123 |
| MroNI | GCCGGC | 1 cut(s) | 257 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1760 |
| MslI | CAYNNNNRTG | 1 cut(s) | 834 |
| MspA1I | CMGCKG | 3 cut(s) | 327, 1009, 1586 |
| MunI | CAATTG | 4 cut(s) | 1800, 2120, 2922, 3030 |
| MvaI | CCWGG | 7 cut(s) | 954, 1077, 1507, 2442, 2907, 3401, 3453 |
| MvnI | CGCG | 2 cut(s) | 303, 1009 |
| NaeI | GCCGGC | 1 cut(s) | 259 |
| NciI | CCSGG | 6 cut(s) | 360, 367, 1517, 2477, 3070, 3071 |
| NcoI | CCATGG | 1 cut(s) | 1614 |
| NdeII | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| NgoMIV | GCCGGC | 1 cut(s) | 257 |
| NlaIV | GGNNCC | 6 cut(s) | 351, 357, 364, 1055, 2439, 3405 |
| NmeAIII | GCCGAG | 2 cut(s) | 208, 502 |
| NmuCI | GTSAC | 1 cut(s) | 2317 |
| NsiI | ATGCAT | 1 cut(s) | 1815 |
| NspI | RCATGY | 3 cut(s) | 1813, 2646, 3151 |
| OliI | CACNNNNGTG | 1 cut(s) | 834 |
| PaeR7I | CTCGAG | 1 cut(s) | 3154 |
| PagI | TCATGA | 5 cut(s) | 388, 592, 781, 2355, 2589 |
| PciI | ACATGT | 1 cut(s) | 2642 |
| PciSI | GCTCTTC | 1 cut(s) | 1416 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 207, 213 |
| PdiI | GCCGGC | 1 cut(s) | 259 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1760 |
| PfoI | TCCNGGA | 3 cut(s) | 1505, 2905, 3451 |
| PleI | GAGTC | 9 cut(s) | 227, 280, 658, 1683, 1909, 2074, 2589, 2782, 3082 |
| PpsI | GAGTC | 9 cut(s) | 227, 280, 658, 1683, 1909, 2074, 2589, 2782, 3082 |
| PpuMI | RGGWCCY | 1 cut(s) | 1054 |
| PscI | ACATGT | 1 cut(s) | 2642 |
| Psp124BI | GAGCTC | 3 cut(s) | 131, 898, 1839 |
| Psp1406I | AACGTT | 1 cut(s) | 2939 |
| Psp5II | RGGWCCY | 1 cut(s) | 1054 |
| Psp6I | CCWGG | 7 cut(s) | 952, 1075, 1505, 2440, 2905, 3399, 3451 |
| PspFI | CCCAGC | 3 cut(s) | 560, 1680, 1793 |
| PspGI | CCWGG | 7 cut(s) | 952, 1075, 1505, 2440, 2905, 3399, 3451 |
| PspN4I | GGNNCC | 6 cut(s) | 351, 357, 364, 1055, 2439, 3405 |
| PspPI | GGNCC | 5 cut(s) | 363, 1004, 1054, 1495, 3067 |
| PspPPI | RGGWCCY | 1 cut(s) | 1054 |
| PstI | CTGCAG | 1 cut(s) | 1405 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2234, 2681 |
| PsuI | RGATCY | 2 cut(s) | 2909, 3086 |
| PvuII | CAGCTG | 2 cut(s) | 327, 1586 |
| RsaI | GTAC | 2 cut(s) | 299, 2393 |
| RsaNI | GTAC | 2 cut(s) | 298, 2392 |
| RseI | CAYNNNNRTG | 1 cut(s) | 834 |
| SacI | GAGCTC | 3 cut(s) | 131, 898, 1839 |
| SacII | CCGCGG | 1 cut(s) | 1010 |
| SapI | GCTCTTC | 1 cut(s) | 1416 |
| Sau3AI | GATC | 6 cut(s) | 608, 872, 1531, 2902, 2909, 3086 |
| Sau96I | GGNCC | 5 cut(s) | 363, 1004, 1054, 1495, 3067 |
| SchI | GAGTC | 9 cut(s) | 227, 280, 658, 1684, 1910, 2075, 2590, 2782, 3083 |
| SduI | GDGCHC | 7 cut(s) | 131, 312, 335, 898, 1839, 2254, 2353 |
| SfaNI | GCATC | 6 cut(s) | 310, 802, 814, 1822, 3307, 3553 |
| SfcI | CTRYAG | 2 cut(s) | 867, 1401 |
| Sfr274I | CTCGAG | 1 cut(s) | 3154 |
| Sfr303I | CCGCGG | 1 cut(s) | 1010 |
| SgrAI | CRCCGGYG | 1 cut(s) | 257 |
| SgrBI | CCGCGG | 1 cut(s) | 1010 |
| SinI | GGWCC | 3 cut(s) | 363, 1054, 1495 |
| SlaI | CTCGAG | 1 cut(s) | 3154 |
| SmaI | CCCGGG | 1 cut(s) | 3071 |
| SmiI | ATTTAAAT | 1 cut(s) | 2802 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 834 |
| SmlI | CTYRAG | 3 cut(s) | 3154, 3209, 3530 |
| SmoI | CTYRAG | 3 cut(s) | 3154, 3209, 3530 |
| SspI | AATATT | 1 cut(s) | 3253 |
| SspMI | CTAG | 3 cut(s) | 1652, 2529, 2763 |
| SstI | GAGCTC | 3 cut(s) | 131, 898, 1839 |
| StyI | CCWWGG | 1 cut(s) | 1614 |
| SwaI | ATTTAAAT | 1 cut(s) | 2802 |
| TaaI | ACNGT | 4 cut(s) | 520, 2396, 3179, 3571 |
| TaiI | ACGT | 1 cut(s) | 2942 |
| TaqI | TCGA | 5 cut(s) | 318, 380, 2405, 2639, 3155 |
| TauI | GCSGC | 4 cut(s) | 137, 1009, 1399, 3521 |
| TscAI | CASTG | 5 cut(s) | 841, 1935, 2040, 3120, 3184 |
| TseFI | GTSAC | 1 cut(s) | 2317 |
| TseI | GCWGC | 6 cut(s) | 195, 1117, 1220, 1583, 1586, 3491 |
| Tsp45I | GTSAC | 1 cut(s) | 2317 |
| TspGWI | ACGGA | 2 cut(s) | 1095, 2576 |
| TspMI | CCCGGG | 1 cut(s) | 3069 |
| TspRI | CASTG | 5 cut(s) | 841, 1935, 2040, 3120, 3184 |
| VpaK11BI | GGWCC | 3 cut(s) | 363, 1054, 1495 |
| XapI | RAATTY | 3 cut(s) | 113, 1361, 2482 |
| XceI | RCATGY | 3 cut(s) | 1813, 2646, 3151 |
| XhoI | CTCGAG | 1 cut(s) | 3154 |
| XmaI | CCCGGG | 1 cut(s) | 3069 |
| XmiI | GTMKAC | 2 cut(s) | 1574, 1777 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1760 |
| XspI | CTAG | 3 cut(s) | 1652, 2529, 2763 |
| Zsp2I | ATGCAT | 1 cut(s) | 1815 |