pycom17g04140

Belongs to the histidine acid phosphatase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
2859391 .. 2869193
9803 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3234 bp
ATGGAGGAGGAACAGGAGAGAGAAATCGGAGAGAAGATAAAGATTGGAGTTTGTGTGATGGAAAAGAAGGTGAAATGCGGCTCCGAGGTGTTTTCGGCGCCGATGGGGGAGATTCTCGAAAGGCTGCAAGCATTTGGCGAATTTGAGATCACACATTTTGGGGACAGAGTCATTCTTGAACGATCCAATCGAAAGGTCAGCTGGCCAATTTGTGACTGCTTGATTGCCTTTCATTCCTCTGGCTATCCTTTGGAAAAGGCTGAGGCATATGCTGCTTTGAGGAAGCCTTTTCTAGTAAATGAGTTGGAGCCGCAACACCTTCTCCATGACCGGAGGAAGGTATATGAGCATCTTGAAATGCATGGAGTCCCTGTTCCCAGATATGCCCTTGTGAATAGAGAAGTACCGTATCAAGAGCTGGACTATTTTATTGAGGAAGAAGATTTTGTTGAGGTTCGTGGTCATCGTTTCTGGAAGCCATTTGTGGAGAAGCCTGTTGAAGGTGATGATCATAGTATAATGATATATTATCCCAGTTCGGCAGGTGGAGGAATGAAGGAATTGTTTAGGAAGGTTGGTAACCGGTCTAGTGAGTTCCATCCGGAGGTTAGACGAGTGAGACGTGAAGGCTCTTATATATACGAGGAATTCATGCCAACTGGAGGAACAGATGTCAAGGTGTATACAGTCGGACCTGAATATGCACATGCTGAGGCAAGGAAGTCTCCAGTTGTTGATGGTGTTGTCATGAGAAATCCTGATGGCAAGGAAGTGAGGTATCCTGTTTTGCTGACACCTACTGAGAAGCAAATGGCAAGGGAGGTCTGCATTGCATTTAGGCAAGCGGTTTGTGGGTTTGACCTTTTGCGCTGTGAGGGACGCTCCTATGTTTGTGACGTAAATGGATGGAGTTTCGTAAAAAATTCTCACAAGTATTATGATGATACTGCTTGTGTGCTCAGGAAGATATTTTTAGATGCCAAGGCCCCTCATCTTTCTTCTGCAATTCCACCAACATTACCATGGAAAGTCAATGAACCGAGCCAACCTACTGAGGGACTAACTCGTCAAGGAAGTGGAATCATTGGCAGATTTGGGCAATCGGAGGAGCTACGTTGTGTTATTGCTATTATTCGTCATGGTGACAGAACTCCCAAGCAGAAGGTAAAGCTGAAGGTTACTGAGGAAAAGCTGCTAAACTTGATGCTTAAGTACAATGGTGGACGACCTAGATCCGAGACAAAATTGAAAAGTGCTGTCCAATTGCAAGATTTATTAGATGCCACACGAATGCTAGTACCTCGTACCAGACCAGGTCGAGAAAGTGATAGTGAGGCGGAAGACATTGAACATGCTGAAAAACTTCGTCAAGTTAAAGCAGTGCTTGAGGAGGGGGGCCATTTCTCTGGCATTTATAGGAAGGTTCAACTAAAGCCACTAAAGTGGGTTAAGGTGGCAAAAAGCAATGGTGAAGGTGAGGAAGAACGCCCAGTTGAAGCTTTGATGGTTCTTAAATACGGGGGTGTCCTTACACATGCTGGAAGAAAGCAGGCTGAGGAGCTGGGTAGATATTTTCGGAATAATATGTATCCAGGTGAAGGTACCGGCCTGCTTCGCCTCCATAGCACCTATCGTCATGATCTTAAAATCTACAGCTCTGATGAGGGCCGTGTGCAGATGTCTGCAGCTGCTTTTGCTAAAGGCCTACTTGATCTTGAAGGGCAGCTAACACCAATCCTGGTTTCCCTTGTTAGCAAGGACTCTTCTATGTTGGATGGACTTGATAATGCAAGTGTCGAGATGGATGAAGCAAAGGCTAGGTTGAATGAGATTATTACTTGTGGTTTAAAGACGGGTAATAACAGTGCAACACCTCCTTGGATGGCTGATGGAAGTGGTCTACCTTCAAATGCTTCTCAACTTCTACCTAAATTGGTAAAATTGACTAAGAAGGTCACCGAACAAGTAAGACTGCTAGCCAAGGATGAAGATGAGGAACTTACAAAGACAAGCTCATATGATGTAATACTTCCTTATGACCAAGCAAGGGCCCTTGGTAAGACTAACATTGATGTTGATCGTATTGCTGCTGGATTACCATGCGGTAGTGAGGGATTCCTCTTGATGTATGCTCGATGGAGAAAGCTTGTAAGGGACTTGTACAGTGAACGAAAAGAACGATTCGACATAACACAAATTCCAGACGTTTATGACTCGTGCAAATACGATCTCCTGCATAATGCACATCTTAATCTAGAAGGTCTAGATGAGCTGTTCAAAGTTGCTCAGTTACTTGCAGATGGAGTCATCCCAAATGAGTATGGCATTAATCCAACACAGAAGCTCAAGATTGGTTCAAAGATTGCTCGTCGTTTGTTGGGTAAGATAATGATTGACCTGAGGAATACTCGCGAAGAAGCCATCAGTGTTGCTGCTGAACCAAAGAGTGATCAGGATGAACATTCAAAGCCAACCAATACTGAAAAGGAAGATAAGGAGAACCACGCCAAGCTTCATGTTAAGAGCGATGATAGAAAATCTAGCATGAGTGATATACCAAAGCTTTACACTAAGAATGAAGATGTGAGAAGATCCAGTACAACCAGCGAGATATCAATCGATCAGGATGACGACGATGATAAAGAGACGCAATATCGTTTGGATCCAAAGTATGCAAATGTCAGAACGCCTGAACGGCATGTGCGAACGCGCCTGTACTTCACATCAGAATCTCATATCCACTCTCTCATGAATGTTCTCCGTTACTGTAACTTGGATGAGTCTCTTCAAGGAGAGGAAGGCCTTGTTTGCCATAGCGCTTTGGAGCGTTTATACAATACTAAGGAGCTTGACTACATGAGTTATATAGTTCTGAGGATGTTCGAGGACACAGCGGTAGCTCTTGAAGATACGAAAAGATTTCGCGTGGAATTGACCTTTAGCCGTGGTGCAGATCTATCACCATTGGAGAGCAATGACAGTAAGGCTTCGTTCTTGCGTCAAGAGCACACACTACCGGTCATGGGTCCAGAGAGGTTGCAAGAGGTGGGATCATATCTAACATTAGATAAAATGGAGACAATGATACGCTCATTTGCTATGCCAGCGGAAGATTTTCCTCCACCGTCGACTCCAGCAGGATTCTCGGGCTATTTCTCAAAAAGTGCGGCGGTGCTTGAGCGCCTGGTAAATCTCTGGCCTTTCCATAAGCATGCTAATTCTAATGGAAAGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1078

Amino Acids

122.33

Weight (kDa)

6.22

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPIP5K2_N PF18086 13 - 110 1.9e-31 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
His_Phos_2 PF00328 370 - 981 1.1e-71 Histidine phosphatase superfamily (branch 2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 533
AasI GACNNNNNNGTC 1 cut(s) 1065
Acc36I ACCTGC 1 cut(s) 533
Acc65I GGTACC 1 cut(s) 1601
AccB1I GGYRCC 2 cut(s) 97, 1601
AccI GTMKAC 3 cut(s) 683, 1900, 3128
AccII CGCG 3 cut(s) 2412, 2710, 2925
AccIII TCCGGA 1 cut(s) 601
AciI CCGC 9 cut(s) 78, 311, 845, 1337, 2103, 2894, 3107, 3167, 3170
AclWI GGATC 6 cut(s) 177, 1227, 2586, 2657, 2670, 3058
AcoI YGGCCR 1 cut(s) 203
AcsI RAATTY 4 cut(s) 140, 647, 922, 2196
AcuI CTGAAG 1 cut(s) 1193
AcyI GRCGYC 1 cut(s) 98
AfaI GTAC 8 cut(s) 405, 1214, 1299, 1306, 1603, 2162, 2599, 2717
AfeI AGCGCT 1 cut(s) 2818
AfiI CCNNNNNNNGG 8 cut(s) 337, 500, 604, 662, 1055, 1598, 2047, 3023
AflII CTTAAG 1 cut(s) 1208
AgeI ACCGGT 2 cut(s) 582, 3016
AjiI CACGTC 1 cut(s) 623
AjnI CCWGG 4 cut(s) 1312, 1591, 1737, 3183
AjuI GAANNNNNNNTTGG 2 cut(s) 1726, 1758
AleI CACNNNNGTG 1 cut(s) 1441
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
Alw21I GWGCWC 2 cut(s) 960, 3009
Alw26I GTCTC 6 cut(s) 613, 729, 1232, 2639, 2787, 3071
AlwI GGATC 6 cut(s) 177, 1227, 2586, 2657, 2670, 3058
Ama87I CYCGRG 1 cut(s) 3145
Aor13HI TCCGGA 1 cut(s) 601
Aor51HI AGCGCT 1 cut(s) 2818
AoxI GGCC 9 cut(s) 203, 984, 1396, 1606, 1666, 1702, 2049, 2800, 3197
ApaI GGGCCC 1 cut(s) 2053
ApeKI GCWGC 8 cut(s) 124, 272, 1192, 1685, 1688, 1723, 2087, 2432
ApoI RAATTY 4 cut(s) 140, 647, 922, 2196
AseI ATTAAT 1 cut(s) 2328
AsiGI ACCGGT 2 cut(s) 582, 3016
Asp700I GAANNNNTTC 2 cut(s) 1362, 3114
Asp718I GGTACC 1 cut(s) 1601
AspLEI GCGC 5 cut(s) 100, 870, 2712, 2819, 3183
AspS9I GGNCC 7 cut(s) 692, 985, 1396, 1666, 2049, 2050, 3026
AsuHPI GGTGA 8 cut(s) 82, 515, 1154, 1481, 1487, 1607, 1948, 2952
AsuNHI GCTAGC 1 cut(s) 1975
AvaI CYCGRG 1 cut(s) 3145
AvaII GGWCC 2 cut(s) 692, 3026
AxyI CCTNAGG 1 cut(s) 2399
BaeGI GKGCMC 1 cut(s) 2053
BalI TGGCCA 1 cut(s) 205
BamHI GGATCC 1 cut(s) 2662
BanI GGYRCC 2 cut(s) 97, 1601
BanII GRGCYC 1 cut(s) 2053
BarI GAAGNNNNNNTAC 2 cut(s) 2581, 2613
BauI CACGAG 1 cut(s) 2215
BbsI GAAGAC 1 cut(s) 1347
Bbv12I GWGCWC 2 cut(s) 960, 3009
BbvCI CCTCAGC 3 cut(s) 261, 711, 1554
BbvI GCAGC 8 cut(s) 111, 259, 1179, 1675, 1697, 1735, 2074, 2419
BceAI ACGGC 3 cut(s) 1653, 2711, 2928
BcgI CGANNNNNNTGC 2 cut(s) 3126, 3160
BciT130I CCWGG 4 cut(s) 1314, 1593, 1739, 3185
BciVI GTATCC 2 cut(s) 789, 1599
BclI TGATCA 2 cut(s) 508, 2449
BcoDI GTCTC 6 cut(s) 613, 729, 1232, 2639, 2787, 3071
BfaI CTAG 9 cut(s) 293, 588, 1230, 1295, 1818, 1976, 2255, 2264, 2541
BfmI CTRYAG 2 cut(s) 1651, 1683
BfoI RGCGCY 3 cut(s) 101, 2820, 3184
BfrI CTTAAG 1 cut(s) 1208
BfuAI ACCTGC 1 cut(s) 533
BfuI GTATCC 2 cut(s) 789, 1599
BglI GCCNNNNNGGC 1 cut(s) 2695
BglII AGATCT 1 cut(s) 2953
Bme1390I CCNGG 4 cut(s) 1314, 1593, 1739, 3185
Bme18I GGWCC 2 cut(s) 692, 3026
BmeT110I CYCGRG 1 cut(s) 3145
BmgBI CACGTC 1 cut(s) 623
BmgT120I GGNCC 7 cut(s) 692, 985, 1396, 1666, 2049, 2050, 3026
BmiI GGNNCC 9 cut(s) 82, 99, 309, 987, 1397, 1603, 2051, 2664, 3027
BmrFI CCNGG 4 cut(s) 1314, 1593, 1739, 3185
BmrI ACTGGG 2 cut(s) 528, 1484
BmsI GCATC 4 cut(s) 358, 967, 1194, 1270
BmtI GCTAGC 1 cut(s) 1979
BmuI ACTGGG 2 cut(s) 528, 1484
BpiI GAAGAC 1 cut(s) 1347
BplI GAGNNNNNCTC 4 cut(s) 866, 898, 2392, 2424
BpmI CTGGAG 3 cut(s) 681, 711, 3117
Bpu10I CCTNAGC 4 cut(s) 261, 711, 959, 1554
BpuEI CTTGAG 3 cut(s) 1406, 2330, 3197
Bsa29I ATCGAT 1 cut(s) 2619
BsaBI GATNNNNATC 2 cut(s) 2076, 2615
BsaHI GRCGYC 1 cut(s) 98
BsaJI CCNNGG 7 cut(s) 84, 981, 1022, 1877, 1980, 2053, 2944
BsaWI WCCGGW 4 cut(s) 330, 582, 601, 3016
BsaXI ACNNNNNCTCC 6 cut(s) 39, 69, 306, 336, 357, 387
Bsc4I CCNNNNNNNGG 8 cut(s) 337, 500, 604, 662, 1055, 1598, 2047, 3023
Bse118I RCCGGY 3 cut(s) 582, 1604, 3016
Bse1I ACTGG 5 cut(s) 534, 664, 728, 1490, 2595
Bse21I CCTNAGG 1 cut(s) 2399
Bse3DI GCAATG 3 cut(s) 828, 1471, 2980
Bse8I GATNNNNATC 2 cut(s) 2076, 2615
BseAI TCCGGA 1 cut(s) 601
BseBI CCWGG 4 cut(s) 1314, 1593, 1739, 3185
BseCI ATCGAT 1 cut(s) 2619
BseDI CCNNGG 7 cut(s) 84, 981, 1022, 1877, 1980, 2053, 2944
BseJI GATNNNNATC 2 cut(s) 2076, 2615
BseLI CCNNNNNNNGG 8 cut(s) 337, 500, 604, 662, 1055, 1598, 2047, 3023
BseMI GCAATG 3 cut(s) 828, 1471, 2980
BseNI ACTGG 5 cut(s) 534, 664, 728, 1490, 2595
BseRI GAGGAG 4 cut(s) 20, 1121, 1403, 1571
BseSI GKGCMC 1 cut(s) 2053
BseXI GCAGC 8 cut(s) 111, 259, 1179, 1675, 1697, 1735, 2074, 2419
BseYI CCCAGC 1 cut(s) 1561
BsgI GTGCAG 2 cut(s) 1694, 2970
Bsh1236I CGCG 3 cut(s) 2412, 2710, 2925
BshFI GGCC 9 cut(s) 205, 986, 1398, 1608, 1668, 1704, 2051, 2802, 3199
BshNI GGYRCC 2 cut(s) 97, 1601
BshTI ACCGGT 2 cut(s) 582, 3016
BshVI ATCGAT 1 cut(s) 2619
BsiHKAI GWGCWC 2 cut(s) 960, 3009
BsiHKCI CYCGRG 1 cut(s) 3145
BsiSI CCGG 5 cut(s) 331, 583, 602, 1605, 3017
BslFI GGGAC 5 cut(s) 176, 353, 891, 1071, 2168
BslI CCNNNNNNNGG 8 cut(s) 337, 500, 604, 662, 1055, 1598, 2047, 3023
BsmAI GTCTC 6 cut(s) 613, 729, 1232, 2639, 2787, 3071
BsmBI CGTCTC 2 cut(s) 613, 2639
BsmFI GGGAC 5 cut(s) 176, 353, 891, 1071, 2168
BsmI GAATGC 1 cut(s) 1296
BsnI GGCC 9 cut(s) 205, 986, 1398, 1608, 1668, 1704, 2051, 2802, 3199
BsoBI CYCGRG 1 cut(s) 3145
Bsp120I GGGCCC 1 cut(s) 2049
Bsp1286I GDGCHC 3 cut(s) 960, 2053, 3009
Bsp13I TCCGGA 1 cut(s) 601
Bsp1407I TGTACA 1 cut(s) 2160
Bsp19I CCATGG 1 cut(s) 1022
Bsp68I TCGCGA 1 cut(s) 2412
BspACI CCGC 9 cut(s) 78, 311, 845, 1337, 2103, 2894, 3107, 3167, 3170
BspANI GGCC 9 cut(s) 205, 986, 1398, 1608, 1668, 1704, 2051, 2802, 3199
BspDI ATCGAT 1 cut(s) 2619
BspEI TCCGGA 1 cut(s) 601
BspFNI CGCG 3 cut(s) 2412, 2710, 2925
BspHI TCATGA 3 cut(s) 747, 1636, 2748
BspLI GGNNCC 9 cut(s) 82, 99, 309, 987, 1397, 1603, 2051, 2664, 3027
BspMAI CTGCAG 1 cut(s) 1687
BspMI ACCTGC 1 cut(s) 533
BspOI GCTAGC 1 cut(s) 1979
BspPI GGATC 6 cut(s) 177, 1227, 2586, 2657, 2670, 3058
BspT107I GGYRCC 2 cut(s) 97, 1601
BspTI CTTAAG 1 cut(s) 1208
BsrDI GCAATG 3 cut(s) 828, 1471, 2980
BsrFI RCCGGY 3 cut(s) 582, 1604, 3016
BsrGI TGTACA 1 cut(s) 2160
BsrI ACTGG 5 cut(s) 534, 664, 728, 1490, 2595
BssAI RCCGGY 3 cut(s) 582, 1604, 3016
BssECI CCNNGG 7 cut(s) 84, 981, 1022, 1877, 1980, 2053, 2944
BssNAI GTATAC 1 cut(s) 684
BssNI GRCGYC 1 cut(s) 98
BssSI CACGAG 1 cut(s) 2215
BssT1I CCWWGG 5 cut(s) 981, 1022, 1877, 1980, 2053
Bst1107I GTATAC 1 cut(s) 684
Bst2BI CACGAG 1 cut(s) 2215
Bst2UI CCWGG 4 cut(s) 1314, 1593, 1739, 3185
Bst4CI ACNGT 7 cut(s) 408, 688, 1865, 2165, 2768, 2981, 3126
Bst6I CTCTTC 2 cut(s) 1768, 2790
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 1208
BstAPI GCANNNNNTGC 1 cut(s) 272
BstAUI TGTACA 1 cut(s) 2160
BstC8I GCNNGC 8 cut(s) 129, 203, 843, 1551, 1610, 1977, 3105, 3213
BstDSI CCRYGG 2 cut(s) 1022, 2944
BstEII GGTNACC 2 cut(s) 578, 1954
BstENI CCTNNNNNAGG 1 cut(s) 498
BstFNI CGCG 3 cut(s) 2412, 2710, 2925
BstH2I RGCGCY 3 cut(s) 101, 2820, 3184
BstHHI GCGC 5 cut(s) 100, 870, 2712, 2819, 3183
BstMAI GTCTC 6 cut(s) 613, 729, 1232, 2639, 2787, 3071
BstMWI GCNNNNNNNGC 8 cut(s) 272, 1614, 1623, 1694, 2695, 2808, 3004, 3104
BstNI CCWGG 4 cut(s) 1314, 1593, 1739, 3185
BstNSI RCATGY 5 cut(s) 710, 1355, 1538, 2702, 3215
BstPI GGTNACC 2 cut(s) 578, 1954
BstSCI CCNGG 4 cut(s) 1312, 1591, 1737, 3183
BstSFI CTRYAG 2 cut(s) 1651, 1683
BstSLI GKGCMC 1 cut(s) 2053
BstUI CGCG 3 cut(s) 2412, 2710, 2925
BstV1I GCAGC 8 cut(s) 111, 259, 1179, 1675, 1697, 1735, 2074, 2419
BstV2I GAAGAC 1 cut(s) 1347
BstX2I RGATCY 4 cut(s) 1232, 2591, 2662, 2953
BstXI CCANNNNNNTGG 2 cut(s) 1406, 1443
BstYI RGATCY 4 cut(s) 1232, 2591, 2662, 2953
BstZ17I GTATAC 1 cut(s) 684
Bsu15I ATCGAT 1 cut(s) 2619
Bsu36I CCTNAGG 1 cut(s) 2399
BsuI GTATCC 2 cut(s) 789, 1599
BsuRI GGCC 9 cut(s) 205, 986, 1398, 1608, 1668, 1704, 2051, 2802, 3199
BsuTUI ATCGAT 1 cut(s) 2619
BtgI CCRYGG 2 cut(s) 1022, 2944
BtgZI GCGATG 1 cut(s) 2541
BtrI CACGTC 1 cut(s) 623
BtsI GCAGTG 1 cut(s) 1386
BtsIMutI CAGTG 4 cut(s) 1386, 1870, 2170, 2431
BtuMI TCGCGA 1 cut(s) 2412
BveI ACCTGC 1 cut(s) 533
Cac8I GCNNGC 8 cut(s) 129, 203, 843, 1551, 1610, 1977, 3105, 3213
CciI TCATGA 3 cut(s) 747, 1636, 2748
CfoI GCGC 5 cut(s) 100, 870, 2712, 2819, 3183
Cfr10I RCCGGY 3 cut(s) 582, 1604, 3016
Cfr13I GGNCC 7 cut(s) 692, 985, 1396, 1666, 2049, 2050, 3026
ClaI ATCGAT 1 cut(s) 2619
CseI GACGC 3 cut(s) 888, 2656, 2987
CsiI ACCWGGT 1 cut(s) 1312
Csp6I GTAC 8 cut(s) 404, 1213, 1298, 1305, 1602, 2161, 2598, 2716
CspAI ACCGGT 2 cut(s) 582, 3016
CviQI GTAC 8 cut(s) 404, 1213, 1298, 1305, 1602, 2161, 2598, 2716
DinI GGCGCC 1 cut(s) 99
DraI TTTAAA 1 cut(s) 1848
DrdI GACNNNNNNGTC 1 cut(s) 1065
DseDI GACNNNNNNGTC 1 cut(s) 1065
EaeI YGGCCR 1 cut(s) 203
Eam1104I CTCTTC 2 cut(s) 1768, 2790
EarI CTCTTC 2 cut(s) 1768, 2790
EciI GGCGGA 1 cut(s) 1352
Eco130I CCWWGG 5 cut(s) 981, 1022, 1877, 1980, 2053
Eco147I AGGCCT 2 cut(s) 1704, 2802
Eco24I GRGCYC 1 cut(s) 2053
Eco32I GATATC 1 cut(s) 2613
Eco47I GGWCC 2 cut(s) 692, 3026
Eco47III AGCGCT 1 cut(s) 2818
Eco57I CTGAAG 1 cut(s) 1193
Eco81I CCTNAGG 1 cut(s) 2399
Eco88I CYCGRG 1 cut(s) 3145
Eco91I GGTNACC 2 cut(s) 578, 1954
EcoNI CCTNNNNNAGG 1 cut(s) 498
EcoO109I RGGNCCY 3 cut(s) 985, 2049, 2050
EcoO65I GGTNACC 2 cut(s) 578, 1954
EcoRI GAATTC 1 cut(s) 647
EcoRII CCWGG 4 cut(s) 1312, 1591, 1737, 3183
EcoRV GATATC 1 cut(s) 2613
EcoT14I CCWWGG 5 cut(s) 981, 1022, 1877, 1980, 2053
EcoT22I ATGCAT 1 cut(s) 363
EcoT38I GRGCYC 1 cut(s) 2053
EgeI GGCGCC 1 cut(s) 99
EheI GGCGCC 1 cut(s) 99
ErhI CCWWGG 5 cut(s) 981, 1022, 1877, 1980, 2053
Esp3I CGTCTC 2 cut(s) 613, 2639
FalI AAGNNNNNCTT 4 cut(s) 1368, 1400, 1692, 1724
FaqI GGGAC 5 cut(s) 176, 353, 891, 1071, 2168
FauNDI CATATG 2 cut(s) 268, 2017
FbaI TGATCA 2 cut(s) 508, 2449
FblI GTMKAC 3 cut(s) 683, 1900, 3128
FriOI GRGCYC 1 cut(s) 2053
FspBI CTAG 9 cut(s) 293, 588, 1230, 1295, 1818, 1976, 2255, 2264, 2541
GlaI GCGC 5 cut(s) 99, 869, 2711, 2818, 3182
GsaI CCCAGC 1 cut(s) 1565
GsuI CTGGAG 3 cut(s) 681, 711, 3117
HaeII RGCGCY 3 cut(s) 101, 2820, 3184
HaeIII GGCC 9 cut(s) 205, 986, 1398, 1608, 1668, 1704, 2051, 2802, 3199
HapII CCGG 5 cut(s) 331, 583, 602, 1605, 3017
HgaI GACGC 3 cut(s) 888, 2656, 2987
HhaI GCGC 5 cut(s) 100, 870, 2712, 2819, 3183
Hin1I GRCGYC 1 cut(s) 98
Hin6I GCGC 5 cut(s) 98, 868, 2710, 2817, 3181
HinP1I GCGC 5 cut(s) 98, 868, 2710, 2817, 3181
HincII GTYRAC 1 cut(s) 3129
HindII GTYRAC 1 cut(s) 3129
HindIII AAGCTT 4 cut(s) 1497, 2144, 2510, 2561
HpaII CCGG 5 cut(s) 331, 583, 602, 1605, 3017
HphI GGTGA 8 cut(s) 82, 515, 1154, 1481, 1487, 1607, 1948, 2952
Hpy166II GTNNAC 5 cut(s) 684, 1223, 1901, 2168, 3129
Hpy8I GTNNAC 5 cut(s) 684, 1223, 1901, 2168, 3129
Hpy99I CGWCG 3 cut(s) 2373, 2636, 3130
HpyCH4III ACNGT 7 cut(s) 408, 688, 1865, 2165, 2768, 2981, 3126
HpyCH4IV ACGT 4 cut(s) 622, 897, 1114, 2205
HpyF10VI GCNNNNNNNGC 8 cut(s) 272, 1614, 1623, 1694, 2695, 2808, 3004, 3104
HpySE526I ACGT 4 cut(s) 622, 897, 1114, 2205
Hsp92I GRCGYC 1 cut(s) 98
HspAI GCGC 5 cut(s) 98, 868, 2710, 2817, 3181
KasI GGCGCC 1 cut(s) 97
Kpn2I TCCGGA 1 cut(s) 601
KpnI GGTACC 1 cut(s) 1605
Ksp22I TGATCA 2 cut(s) 508, 2449
LmnI GCTCC 7 cut(s) 86, 307, 887, 1108, 1558, 2824, 2845
Lsp1109I GCAGC 8 cut(s) 111, 259, 1179, 1675, 1697, 1735, 2074, 2419
LweI GCATC 4 cut(s) 358, 967, 1194, 1270
MabI ACCWGGT 1 cut(s) 1312
MaeI CTAG 9 cut(s) 293, 588, 1230, 1295, 1818, 1976, 2255, 2264, 2541
MaeII ACGT 4 cut(s) 622, 897, 1114, 2205
MaeIII GTNAC 9 cut(s) 212, 578, 893, 1142, 1177, 1954, 2289, 2762, 2768
MfeI CAATTG 1 cut(s) 1262
MflI RGATCY 4 cut(s) 1232, 2591, 2662, 2953
MhlI GDGCHC 3 cut(s) 960, 2053, 3009
MlsI TGGCCA 1 cut(s) 205
MluNI TGGCCA 1 cut(s) 205
Mly113I GGCGCC 1 cut(s) 98
MlyI GAGTC 7 cut(s) 177, 375, 1754, 2207, 2313, 2789, 3124
MmeI TCCRAC 4 cut(s) 285, 670, 1752, 2357
Mox20I TGGCCA 1 cut(s) 205
Mph1103I ATGCAT 1 cut(s) 363
MroI TCCGGA 1 cut(s) 601
MroXI GAANNNNTTC 2 cut(s) 1362, 3114
MscI TGGCCA 1 cut(s) 205
MseI TTAA 9 cut(s) 1209, 1374, 1449, 1512, 1644, 1847, 2250, 2328, 2520
MslI CAYNNNNRTG 4 cut(s) 1021, 1289, 1441, 3210
Msp20I TGGCCA 1 cut(s) 205
MspA1I CMGCKG 4 cut(s) 201, 1688, 2894, 3107
MspCI CTTAAG 1 cut(s) 1208
MspI CCGG 5 cut(s) 331, 583, 602, 1605, 3017
MspR9I CCNGG 4 cut(s) 1314, 1593, 1739, 3185
MunI CAATTG 1 cut(s) 1262
Mva1269I GAATGC 1 cut(s) 1296
MvaI CCWGG 4 cut(s) 1314, 1593, 1739, 3185
MvnI CGCG 3 cut(s) 2412, 2710, 2925
MwoI GCNNNNNNNGC 8 cut(s) 272, 1614, 1623, 1694, 2695, 2808, 3004, 3104
NarI GGCGCC 1 cut(s) 98
NcoI CCATGG 1 cut(s) 1022
NdeI CATATG 2 cut(s) 268, 2017
NheI GCTAGC 1 cut(s) 1975
NlaIV GGNNCC 9 cut(s) 82, 99, 309, 987, 1397, 1603, 2051, 2664, 3027
NmuCI GTSAC 4 cut(s) 212, 893, 1142, 1954
NruI TCGCGA 1 cut(s) 2412
NsiI ATGCAT 1 cut(s) 363
NspI RCATGY 5 cut(s) 710, 1355, 1538, 2702, 3215
OliI CACNNNNGTG 1 cut(s) 1441
PaeI GCATGC 1 cut(s) 3215
PagI TCATGA 3 cut(s) 747, 1636, 2748
PaqCI CACCTGC 1 cut(s) 533
PceI AGGCCT 2 cut(s) 1704, 2802
PcsI WCGNNNNNNNCGW 5 cut(s) 187, 463, 619, 2176, 2701
PctI GAATGC 1 cut(s) 1296
PdmI GAANNNNTTC 2 cut(s) 1362, 3114
PfeI GAWTC 6 cut(s) 112, 1080, 2115, 2181, 2729, 3141
PflFI GACNNNGTC 2 cut(s) 167, 1314
PinAI ACCGGT 2 cut(s) 582, 3016
PleI GAGTC 7 cut(s) 176, 374, 1754, 2207, 2312, 2788, 3124
PluTI GGCGCC 1 cut(s) 101
PpsI GAGTC 7 cut(s) 176, 374, 1754, 2207, 2312, 2788, 3124
PshBI ATTAAT 1 cut(s) 2328
Psp6I CCWGG 4 cut(s) 1312, 1591, 1737, 3183
PspEI GGTNACC 2 cut(s) 578, 1954
PspFI CCCAGC 1 cut(s) 1561
PspGI CCWGG 4 cut(s) 1312, 1591, 1737, 3183
PspN4I GGNNCC 9 cut(s) 82, 99, 309, 987, 1397, 1603, 2051, 2664, 3027
PspOMI GGGCCC 1 cut(s) 2049
PspPI GGNCC 7 cut(s) 692, 985, 1396, 1666, 2049, 2050, 3026
PstI CTGCAG 1 cut(s) 1687
PsuI RGATCY 4 cut(s) 1232, 2591, 2662, 2953
PsyI GACNNNGTC 2 cut(s) 167, 1314
PvuII CAGCTG 2 cut(s) 201, 1688
RruI TCGCGA 1 cut(s) 2412
RsaI GTAC 8 cut(s) 405, 1214, 1299, 1306, 1603, 2162, 2599, 2717
RsaNI GTAC 8 cut(s) 404, 1213, 1298, 1305, 1602, 2161, 2598, 2716
RseI CAYNNNNRTG 4 cut(s) 1021, 1289, 1441, 3210
SalI GTCGAC 1 cut(s) 3127
SaqAI TTAA 9 cut(s) 1209, 1374, 1449, 1512, 1644, 1847, 2250, 2328, 2520
Sau96I GGNCC 7 cut(s) 692, 985, 1396, 1666, 2049, 2050, 3026
SchI GAGTC 7 cut(s) 177, 375, 1754, 2207, 2313, 2789, 3124
ScrFI CCNGG 4 cut(s) 1314, 1593, 1739, 3185
SduI GDGCHC 3 cut(s) 960, 2053, 3009
SexAI ACCWGGT 1 cut(s) 1312
SfaNI GCATC 4 cut(s) 358, 967, 1194, 1270
SfcI CTRYAG 2 cut(s) 1651, 1683
SfoI GGCGCC 1 cut(s) 99
SinI GGWCC 2 cut(s) 692, 3026
SmiMI CAYNNNNRTG 4 cut(s) 1021, 1289, 1441, 3210
SmlI CTYRAG 4 cut(s) 1208, 1385, 2345, 3176
SmoI CTYRAG 4 cut(s) 1208, 1385, 2345, 3176
SphI GCATGC 1 cut(s) 3215
SseBI AGGCCT 2 cut(s) 1704, 2802
SsiI CCGC 9 cut(s) 78, 311, 845, 1337, 2103, 2894, 3107, 3167, 3170
SspDI GGCGCC 1 cut(s) 97
SspMI CTAG 9 cut(s) 293, 588, 1230, 1295, 1818, 1976, 2255, 2264, 2541
StuI AGGCCT 2 cut(s) 1704, 2802
StyD4I CCNGG 4 cut(s) 1312, 1591, 1737, 3183
StyI CCWWGG 5 cut(s) 981, 1022, 1877, 1980, 2053
TaaI ACNGT 7 cut(s) 408, 688, 1865, 2165, 2768, 2981, 3126
TaiI ACGT 4 cut(s) 625, 900, 1117, 2208
TaqI TCGA 9 cut(s) 117, 190, 1318, 1797, 2134, 2184, 2619, 2883, 3128
TatI WGTACW 4 cut(s) 1212, 2160, 2597, 2715
TauI GCSGC 3 cut(s) 81, 313, 3170
TfiI GAWTC 6 cut(s) 112, 1080, 2115, 2181, 2729, 3141
Tru1I TTAA 9 cut(s) 1209, 1374, 1449, 1512, 1644, 1847, 2250, 2328, 2520
Tru9I TTAA 9 cut(s) 1209, 1374, 1449, 1512, 1644, 1847, 2250, 2328, 2520
TscAI CASTG 4 cut(s) 1386, 1870, 2170, 2431
TseFI GTSAC 4 cut(s) 212, 893, 1142, 1954
TseI GCWGC 8 cut(s) 124, 272, 1192, 1685, 1688, 1723, 2087, 2432
Tsp45I GTSAC 4 cut(s) 212, 893, 1142, 1954
TspGWI ACGGA 1 cut(s) 2750
TspRI CASTG 4 cut(s) 1386, 1870, 2170, 2431
Tth111I GACNNNGTC 2 cut(s) 167, 1314
Vha464I CTTAAG 1 cut(s) 1208
VpaK11BI GGWCC 2 cut(s) 692, 3026
VspI ATTAAT 1 cut(s) 2328
XagI CCTNNNNNAGG 1 cut(s) 498
XapI RAATTY 4 cut(s) 140, 647, 922, 2196
XbaI TCTAGA 2 cut(s) 2254, 2263
XceI RCATGY 5 cut(s) 710, 1355, 1538, 2702, 3215
XcmI CCANNNNNNNNNTGG 1 cut(s) 1020
XmiI GTMKAC 3 cut(s) 683, 1900, 3128
XmnI GAANNNNTTC 2 cut(s) 1362, 3114
XspI CTAG 9 cut(s) 293, 588, 1230, 1295, 1818, 1976, 2255, 2264, 2541
Zsp2I ATGCAT 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.