Auxin transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02260 AT3G02260 AT3G02260 AT3G02260 |
| fragaria_vesca | FvH4_6g46320 FvH4_6g46320 |
| malus_domestica | MD09G1075600.v1.1 MD17G1066300.v1.1 |
| prunus_persica | Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1 |
| pyrus_communis | pycom09g00280 pycom09g00290 pycom09g00300 pycom17g06650 pycom17g06660 pycom17g06670 pycom17g06680 |
| rosa_chinensis | RchiOBHm_Chr2g0164791 |
| rosa_laevigata | RLG00000021489 |
| rosa_multiflora | Rmu_sc0000946.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00086300 |
| rosa_rugosa | Rorug02G0510400 |
| rosa_samantha | Rh2AG578500 Rh2BG589800 Rh2CG560300 Rh2DG600000 |
| rosa_wichuraiana | Rw2G048030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 582 |
| AarI | CACCTGC | 1 cut(s) | 7205 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 6711 |
| Acc36I | ACCTGC | 3 cut(s) | 1303, 1903, 7205 |
| Acc65I | GGTACC | 1 cut(s) | 5831 |
| AccB1I | GGYRCC | 3 cut(s) | 2778, 4306, 5831 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 6901 |
| AccBSI | CCGCTC | 1 cut(s) | 2715 |
| AccI | GTMKAC | 5 cut(s) | 1167, 3198, 4027, 4058, 4684 |
| AccII | CGCG | 2 cut(s) | 251, 4432 |
| AccIII | TCCGGA | 1 cut(s) | 1396 |
| AcoI | YGGCCR | 3 cut(s) | 2013, 5529, 7038 |
| AcuI | CTGAAG | 7 cut(s) | 261, 623, 1734, 1967, 3555, 3735, 7100 |
| AcvI | CACGTG | 1 cut(s) | 6688 |
| AflII | CTTAAG | 2 cut(s) | 1331, 4973 |
| AflIII | ACRYGT | 1 cut(s) | 3451 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5280 |
| AhlI | ACTAGT | 2 cut(s) | 6056, 6220 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 180, 212, 4880, 4912 |
| AleI | CACNNNNGTG | 1 cut(s) | 6040 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 6950, 6982 |
| Alw21I | GWGCWC | 2 cut(s) | 3064, 6184 |
| AlwNI | CAGNNNCTG | 9 cut(s) | 1076, 1268, 2369, 3044, 3806, 4487, 5146, 7220, 7271 |
| Aor13HI | TCCGGA | 1 cut(s) | 1396 |
| AoxI | GGCC | 7 cut(s) | 328, 2013, 3936, 5045, 5412, 5529, 7038 |
| AseI | ATTAAT | 4 cut(s) | 3609, 3735, 4761, 5061 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3185, 3884 |
| Asp718I | GGTACC | 1 cut(s) | 5831 |
| AspLEI | GCGC | 1 cut(s) | 4432 |
| AsuC2I | CCSGG | 2 cut(s) | 2558, 5162 |
| AsuII | TTCGAA | 1 cut(s) | 929 |
| AvaII | GGWCC | 8 cut(s) | 1118, 1892, 2554, 2609, 3041, 5299, 5384, 6860 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1863, 1896 |
| BalI | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| BamHI | GGATCC | 1 cut(s) | 3766 |
| BanI | GGYRCC | 3 cut(s) | 2778, 4306, 5831 |
| BanII | GRGCYC | 2 cut(s) | 260, 1461 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2721, 2753 |
| BauI | CACGAG | 4 cut(s) | 512, 1233, 1365, 5535 |
| BbrPI | CACGTG | 1 cut(s) | 6688 |
| BbsI | GAAGAC | 4 cut(s) | 5999, 6572, 6908, 7017 |
| Bbv12I | GWGCWC | 2 cut(s) | 3064, 6184 |
| BceAI | ACGGC | 2 cut(s) | 5399, 6662 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 503, 531, 537, 565, 659, 693 |
| BciVI | GTATCC | 1 cut(s) | 5411 |
| BclI | TGATCA | 1 cut(s) | 2896 |
| BcnI | CCSGG | 2 cut(s) | 2558, 5162 |
| BcuI | ACTAGT | 2 cut(s) | 6056, 6220 |
| BfrI | CTTAAG | 2 cut(s) | 1331, 4973 |
| BfuAI | ACCTGC | 3 cut(s) | 1303, 1903, 7205 |
| BfuI | GTATCC | 1 cut(s) | 5411 |
| BglII | AGATCT | 2 cut(s) | 1361, 1825 |
| BlpI | GCTNAGC | 5 cut(s) | 335, 852, 1403, 3972, 5646 |
| BmcAI | AGTACT | 1 cut(s) | 3572 |
| Bme18I | GGWCC | 8 cut(s) | 1118, 1892, 2554, 2609, 3041, 5299, 5384, 6860 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5280 |
| BmrI | ACTGGG | 2 cut(s) | 4395, 5872 |
| BmuI | ACTGGG | 2 cut(s) | 4395, 5872 |
| BpiI | GAAGAC | 4 cut(s) | 5999, 6572, 6908, 7017 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 6970, 7002 |
| BpmI | CTGGAG | 5 cut(s) | 2239, 2669, 4284, 4625, 6746 |
| Bpu1102I | GCTNAGC | 5 cut(s) | 335, 852, 1403, 3972, 5646 |
| Bpu14I | TTCGAA | 1 cut(s) | 929 |
| BpuEI | CTTGAG | 7 cut(s) | 451, 3409, 4289, 6351, 6405, 6548, 6972 |
| BpuMI | CCSGG | 2 cut(s) | 2558, 5162 |
| Bsa29I | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BsaAI | YACGTR | 1 cut(s) | 6688 |
| BsaBI | GATNNNNATC | 6 cut(s) | 2196, 2232, 2593, 3291, 3848, 6588 |
| BsaI | GGTCTC | 2 cut(s) | 4521, 5241 |
| BsaJI | CCNNGG | 4 cut(s) | 321, 3204, 5042, 7035 |
| BsaWI | WCCGGW | 2 cut(s) | 1396, 2332 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 6391, 6421, 6950, 6980 |
| Bse118I | RCCGGY | 3 cut(s) | 330, 743, 1281 |
| Bse1I | ACTGG | 9 cut(s) | 675, 2074, 2780, 3566, 4390, 4481, 5770, 5867, 6767 |
| Bse8I | GATNNNNATC | 6 cut(s) | 2196, 2232, 2593, 3291, 3848, 6588 |
| BseAI | TCCGGA | 1 cut(s) | 1396 |
| BseCI | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BseDI | CCNNGG | 4 cut(s) | 321, 3204, 5042, 7035 |
| BseJI | GATNNNNATC | 6 cut(s) | 2196, 2232, 2593, 3291, 3848, 6588 |
| BseNI | ACTGG | 9 cut(s) | 675, 2074, 2780, 3566, 4390, 4481, 5770, 5867, 6767 |
| BseRI | GAGGAG | 3 cut(s) | 5703, 6707, 7190 |
| BseYI | CCCAGC | 3 cut(s) | 4081, 6094, 6953 |
| BsgI | GTGCAG | 6 cut(s) | 1668, 2031, 3951, 4762, 5159, 6581 |
| Bsh1236I | CGCG | 2 cut(s) | 251, 4432 |
| BshFI | GGCC | 7 cut(s) | 330, 2015, 3938, 5047, 5414, 5531, 7040 |
| BshNI | GGYRCC | 3 cut(s) | 2778, 4306, 5831 |
| BshVI | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3064, 6184 |
| BsiSI | CCGG | 8 cut(s) | 331, 744, 1282, 1397, 2333, 2557, 3190, 5161 |
| BslFI | GGGAC | 4 cut(s) | 426, 2833, 2998, 3766 |
| BsmBI | CGTCTC | 1 cut(s) | 2243 |
| BsmFI | GGGAC | 4 cut(s) | 426, 2833, 2998, 3766 |
| BsmI | GAATGC | 3 cut(s) | 1853, 4735, 5426 |
| BsnI | GGCC | 7 cut(s) | 330, 2015, 3938, 5047, 5414, 5531, 7040 |
| Bso31I | GGTCTC | 2 cut(s) | 4521, 5241 |
| Bsp119I | TTCGAA | 1 cut(s) | 929 |
| Bsp1286I | GDGCHC | 4 cut(s) | 260, 1461, 3064, 6184 |
| Bsp13I | TCCGGA | 1 cut(s) | 1396 |
| Bsp1720I | GCTNAGC | 5 cut(s) | 335, 852, 1403, 3972, 5646 |
| Bsp19I | CCATGG | 1 cut(s) | 7035 |
| BspANI | GGCC | 7 cut(s) | 330, 2015, 3938, 5047, 5414, 5531, 7040 |
| BspDI | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BspEI | TCCGGA | 1 cut(s) | 1396 |
| BspFNI | CGCG | 2 cut(s) | 251, 4432 |
| BspHI | TCATGA | 3 cut(s) | 1806, 2088, 4608 |
| BspMAI | CTGCAG | 6 cut(s) | 904, 1609, 2374, 3311, 3547, 4295 |
| BspMI | ACCTGC | 3 cut(s) | 1303, 1903, 7205 |
| BspQI | GCTCTTC | 3 cut(s) | 1822, 2585, 2722 |
| BspT104I | TTCGAA | 1 cut(s) | 929 |
| BspT107I | GGYRCC | 3 cut(s) | 2778, 4306, 5831 |
| BspTI | CTTAAG | 2 cut(s) | 1331, 4973 |
| BspTNI | GGTCTC | 2 cut(s) | 4521, 5241 |
| BsrBI | CCGCTC | 1 cut(s) | 2715 |
| BsrFI | RCCGGY | 3 cut(s) | 330, 743, 1281 |
| BsrI | ACTGG | 9 cut(s) | 675, 2074, 2780, 3566, 4390, 4481, 5770, 5867, 6767 |
| BssAI | RCCGGY | 3 cut(s) | 330, 743, 1281 |
| BssECI | CCNNGG | 4 cut(s) | 321, 3204, 5042, 7035 |
| BssNAI | GTATAC | 3 cut(s) | 1168, 3199, 4059 |
| BssSI | CACGAG | 4 cut(s) | 512, 1233, 1365, 5535 |
| BssT1I | CCWWGG | 3 cut(s) | 321, 3204, 7035 |
| Bst1107I | GTATAC | 3 cut(s) | 1168, 3199, 4059 |
| Bst2BI | CACGAG | 4 cut(s) | 512, 1233, 1365, 5535 |
| BstAFI | CTTAAG | 2 cut(s) | 1331, 4973 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 4749, 5146 |
| BstBAI | YACGTR | 1 cut(s) | 6688 |
| BstBI | TTCGAA | 1 cut(s) | 929 |
| BstDSI | CCRYGG | 1 cut(s) | 7035 |
| BstFNI | CGCG | 2 cut(s) | 251, 4432 |
| BstHHI | GCGC | 1 cut(s) | 4432 |
| BstUI | CGCG | 2 cut(s) | 251, 4432 |
| BstV2I | GAAGAC | 4 cut(s) | 5999, 6572, 6908, 7017 |
| BstX2I | RGATCY | 8 cut(s) | 1133, 1361, 1825, 3258, 3766, 5807, 6821, 6904 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 2290, 3377, 5224, 7036 |
| BstYI | RGATCY | 8 cut(s) | 1133, 1361, 1825, 3258, 3766, 5807, 6821, 6904 |
| BstZ17I | GTATAC | 3 cut(s) | 1168, 3199, 4059 |
| Bsu15I | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BsuI | GTATCC | 1 cut(s) | 5411 |
| BsuRI | GGCC | 7 cut(s) | 330, 2015, 3938, 5047, 5414, 5531, 7040 |
| BsuTUI | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| BtgI | CCRYGG | 1 cut(s) | 7035 |
| BtgZI | GCGATG | 3 cut(s) | 2182, 2904, 5492 |
| BtsI | GCAGTG | 9 cut(s) | 74, 549, 2797, 4126, 4754, 5144, 5285, 5457, 6640 |
| BveI | ACCTGC | 3 cut(s) | 1303, 1903, 7205 |
| CaiI | CAGNNNCTG | 9 cut(s) | 1076, 1268, 2369, 3044, 3806, 4487, 5146, 7220, 7271 |
| CciI | TCATGA | 3 cut(s) | 1806, 2088, 4608 |
| CfoI | GCGC | 1 cut(s) | 4432 |
| Cfr10I | RCCGGY | 3 cut(s) | 330, 743, 1281 |
| ClaI | ATCGAT | 5 cut(s) | 2543, 4135, 6487, 7189, 7260 |
| CseI | GACGC | 2 cut(s) | 257, 5284 |
| CsiI | ACCWGGT | 1 cut(s) | 3043 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 3448, 3483, 4780, 4815 |
| DraI | TTTAAA | 1 cut(s) | 2490 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 6711 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5280 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 6711 |
| EaeI | YGGCCR | 3 cut(s) | 2013, 5529, 7038 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5280 |
| EciI | GGCGGA | 1 cut(s) | 2319 |
| Eco130I | CCWWGG | 3 cut(s) | 321, 3204, 7035 |
| Eco24I | GRGCYC | 2 cut(s) | 260, 1461 |
| Eco31I | GGTCTC | 2 cut(s) | 4521, 5241 |
| Eco32I | GATATC | 5 cut(s) | 366, 915, 940, 3293, 4940 |
| Eco47I | GGWCC | 8 cut(s) | 1118, 1892, 2554, 2609, 3041, 5299, 5384, 6860 |
| Eco57I | CTGAAG | 7 cut(s) | 261, 623, 1734, 1967, 3555, 3735, 7100 |
| Eco72I | CACGTG | 1 cut(s) | 6688 |
| EcoO109I | RGGNCCY | 3 cut(s) | 3041, 5299, 5384 |
| EcoRI | GAATTC | 5 cut(s) | 720, 758, 2389, 3913, 6014 |
| EcoRV | GATATC | 5 cut(s) | 366, 915, 940, 3293, 4940 |
| EcoT14I | CCWWGG | 3 cut(s) | 321, 3204, 7035 |
| EcoT22I | ATGCAT | 2 cut(s) | 4166, 5872 |
| EcoT38I | GRGCYC | 2 cut(s) | 260, 1461 |
| ErhI | CCWWGG | 3 cut(s) | 321, 3204, 7035 |
| Esp3I | CGTCTC | 1 cut(s) | 2243 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 845, 877, 1907, 1939, 4840, 4872, 7009, 7041 |
| FaqI | GGGAC | 4 cut(s) | 426, 2833, 2998, 3766 |
| FauI | CCCGC | 3 cut(s) | 403, 2720, 4226 |
| FauNDI | CATATG | 2 cut(s) | 3124, 3490 |
| FbaI | TGATCA | 1 cut(s) | 2896 |
| FblI | GTMKAC | 5 cut(s) | 1167, 3198, 4027, 4058, 4684 |
| FriOI | GRGCYC | 2 cut(s) | 260, 1461 |
| GlaI | GCGC | 1 cut(s) | 4431 |
| GsaI | CCCAGC | 3 cut(s) | 4085, 6098, 6957 |
| GsuI | CTGGAG | 5 cut(s) | 2239, 2669, 4284, 4625, 6746 |
| HaeIII | GGCC | 7 cut(s) | 330, 2015, 3938, 5047, 5414, 5531, 7040 |
| HapII | CCGG | 8 cut(s) | 331, 744, 1282, 1397, 2333, 2557, 3190, 5161 |
| HgaI | GACGC | 2 cut(s) | 257, 5284 |
| HhaI | GCGC | 1 cut(s) | 4432 |
| Hin6I | GCGC | 1 cut(s) | 4430 |
| HinP1I | GCGC | 1 cut(s) | 4430 |
| HincII | GTYRAC | 2 cut(s) | 4685, 5200 |
| HindII | GTYRAC | 2 cut(s) | 4685, 5200 |
| HindIII | AAGCTT | 6 cut(s) | 1334, 1916, 1957, 2638, 4325, 6440 |
| HpaI | GTTAAC | 1 cut(s) | 5200 |
| HpaII | CCGG | 8 cut(s) | 331, 744, 1282, 1397, 2333, 2557, 3190, 5161 |
| Hpy99I | CGWCG | 1 cut(s) | 1677 |
| HpyCH4IV | ACGT | 3 cut(s) | 4528, 4675, 6687 |
| HpySE526I | ACGT | 3 cut(s) | 4528, 4675, 6687 |
| HspAI | GCGC | 1 cut(s) | 4430 |
| Kpn2I | TCCGGA | 1 cut(s) | 1396 |
| KpnI | GGTACC | 1 cut(s) | 5835 |
| KroI | GCCGGC | 2 cut(s) | 330, 743 |
| KroNI | GCCGGC | 2 cut(s) | 332, 745 |
| Ksp22I | TGATCA | 1 cut(s) | 2896 |
| KspAI | GTTAAC | 1 cut(s) | 5200 |
| LguI | GCTCTTC | 3 cut(s) | 1822, 2585, 2722 |
| LmnI | GCTCC | 8 cut(s) | 1303, 1309, 1399, 2934, 5924, 6399, 6600, 6727 |
| MabI | ACCWGGT | 1 cut(s) | 3043 |
| MaeII | ACGT | 3 cut(s) | 4528, 4675, 6687 |
| MbiI | CCGCTC | 1 cut(s) | 2715 |
| MfeI | CAATTG | 2 cut(s) | 4717, 6348 |
| MflI | RGATCY | 8 cut(s) | 1133, 1361, 1825, 3258, 3766, 5807, 6821, 6904 |
| MhlI | GDGCHC | 4 cut(s) | 260, 1461, 3064, 6184 |
| MlsI | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| MluNI | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| MmeI | TCCRAC | 7 cut(s) | 404, 547, 1096, 1870, 3156, 6498, 6882 |
| Mox20I | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| Mph1103I | ATGCAT | 2 cut(s) | 4166, 5872 |
| MroI | TCCGGA | 1 cut(s) | 1396 |
| MroNI | GCCGGC | 2 cut(s) | 330, 743 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3185, 3884 |
| MscI | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| MslI | CAYNNNNRTG | 8 cut(s) | 627, 2288, 3375, 4373, 4666, 4728, 5826, 6040 |
| Msp20I | TGGCCA | 3 cut(s) | 2015, 5531, 7040 |
| MspA1I | CMGCKG | 5 cut(s) | 403, 800, 2926, 5617, 5843 |
| MspCI | CTTAAG | 2 cut(s) | 1331, 4973 |
| MspI | CCGG | 8 cut(s) | 331, 744, 1282, 1397, 2333, 2557, 3190, 5161 |
| MunI | CAATTG | 2 cut(s) | 4717, 6348 |
| Mva1269I | GAATGC | 3 cut(s) | 1853, 4735, 5426 |
| MvnI | CGCG | 2 cut(s) | 251, 4432 |
| NaeI | GCCGGC | 2 cut(s) | 332, 745 |
| NciI | CCSGG | 2 cut(s) | 2558, 5162 |
| NcoI | CCATGG | 1 cut(s) | 7035 |
| NdeI | CATATG | 2 cut(s) | 3124, 3490 |
| NgoMIV | GCCGGC | 2 cut(s) | 330, 743 |
| NmuCI | GTSAC | 8 cut(s) | 1080, 4000, 4408, 4690, 5272, 5452, 7102, 7179 |
| NsiI | ATGCAT | 2 cut(s) | 4166, 5872 |
| NspV | TTCGAA | 1 cut(s) | 929 |
| OliI | CACNNNNGTG | 1 cut(s) | 6040 |
| PaeI | GCATGC | 5 cut(s) | 1045, 2060, 2214, 2940, 6406 |
| PagI | TCATGA | 3 cut(s) | 1806, 2088, 4608 |
| PaqCI | CACCTGC | 1 cut(s) | 7205 |
| PciI | ACATGT | 1 cut(s) | 3451 |
| PciSI | GCTCTTC | 3 cut(s) | 1822, 2585, 2722 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4681 |
| PctI | GAATGC | 3 cut(s) | 1853, 4735, 5426 |
| PdiI | GCCGGC | 2 cut(s) | 332, 745 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3185, 3884 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 6901 |
| PfoI | TCCNGGA | 3 cut(s) | 1343, 2412, 6723 |
| PmaCI | CACGTG | 1 cut(s) | 6688 |
| PmlI | CACGTG | 1 cut(s) | 6688 |
| Ppu21I | YACGTR | 1 cut(s) | 6688 |
| PpuMI | RGGWCCY | 3 cut(s) | 3041, 5299, 5384 |
| PscI | ACATGT | 1 cut(s) | 3451 |
| PshBI | ATTAAT | 4 cut(s) | 3609, 3735, 4761, 5061 |
| PsiI | TTATAA | 1 cut(s) | 582 |
| Psp5II | RGGWCCY | 3 cut(s) | 3041, 5299, 5384 |
| PspCI | CACGTG | 1 cut(s) | 6688 |
| PspFI | CCCAGC | 3 cut(s) | 4081, 6094, 6953 |
| PspPPI | RGGWCCY | 3 cut(s) | 3041, 5299, 5384 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4451, 4483 |
| PstI | CTGCAG | 6 cut(s) | 904, 1609, 2374, 3311, 3547, 4295 |
| PstNI | CAGNNNCTG | 9 cut(s) | 1076, 1268, 2369, 3044, 3806, 4487, 5146, 7220, 7271 |
| PsuI | RGATCY | 8 cut(s) | 1133, 1361, 1825, 3258, 3766, 5807, 6821, 6904 |
| PvuII | CAGCTG | 2 cut(s) | 2926, 5617 |
| RseI | CAYNNNNRTG | 8 cut(s) | 627, 2288, 3375, 4373, 4666, 4728, 5826, 6040 |
| SalI | GTCGAC | 1 cut(s) | 4683 |
| SapI | GCTCTTC | 3 cut(s) | 1822, 2585, 2722 |
| SbfI | CCTGCAGG | 1 cut(s) | 904 |
| ScaI | AGTACT | 1 cut(s) | 3572 |
| SdaI | CCTGCAGG | 1 cut(s) | 904 |
| SduI | GDGCHC | 4 cut(s) | 260, 1461, 3064, 6184 |
| SexAI | ACCWGGT | 1 cut(s) | 3043 |
| SfuI | TTCGAA | 1 cut(s) | 929 |
| SinI | GGWCC | 8 cut(s) | 1118, 1892, 2554, 2609, 3041, 5299, 5384, 6860 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 627, 2288, 3375, 4373, 4666, 4728, 5826, 6040 |
| SmlI | CTYRAG | 9 cut(s) | 466, 1331, 3424, 4268, 4973, 6366, 6420, 6527, 6987 |
| SmoI | CTYRAG | 9 cut(s) | 466, 1331, 3424, 4268, 4973, 6366, 6420, 6527, 6987 |
| SpeI | ACTAGT | 2 cut(s) | 6056, 6220 |
| SphI | GCATGC | 5 cut(s) | 1045, 2060, 2214, 2940, 6406 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 904 |
| SspI | AATATT | 2 cut(s) | 4048, 6272 |
| StyI | CCWWGG | 3 cut(s) | 321, 3204, 7035 |
| TaiI | ACGT | 3 cut(s) | 4531, 4678, 6690 |
| TaqII | GACCGA | 1 cut(s) | 5471 |
| TatI | WGTACW | 8 cut(s) | 267, 1216, 1573, 2177, 2221, 3570, 5708, 5955 |
| TauI | GCSGC | 3 cut(s) | 1546, 3092, 4755 |
| TseFI | GTSAC | 8 cut(s) | 1080, 4000, 4408, 4690, 5272, 5452, 7102, 7179 |
| Tsp45I | GTSAC | 8 cut(s) | 1080, 4000, 4408, 4690, 5272, 5452, 7102, 7179 |
| TspGWI | ACGGA | 3 cut(s) | 4373, 5217, 5369 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 6901 |
| Vha464I | CTTAAG | 2 cut(s) | 1331, 4973 |
| VpaK11BI | GGWCC | 8 cut(s) | 1118, 1892, 2554, 2609, 3041, 5299, 5384, 6860 |
| VspI | ATTAAT | 4 cut(s) | 3609, 3735, 4761, 5061 |
| XbaI | TCTAGA | 2 cut(s) | 883, 6391 |
| XmiI | GTMKAC | 5 cut(s) | 1167, 3198, 4027, 4058, 4684 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3185, 3884 |
| ZrmI | AGTACT | 1 cut(s) | 3572 |
| Zsp2I | ATGCAT | 2 cut(s) | 4166, 5872 |