Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005867

Physical Location & Seq

Genomic Coordinates Forward (+)

8525481 .. 8547993

Gene Structure 22513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00086300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 15828 bp

ATGCCAACTCCACCTACTACCGCAGTCGGGCCGCCCACCATGGCGTCGTCACCAACTCTCTCTCTCTCTCTCCCTCTCTCTTACGGCCGTCGACTCCGGACCGCGGTCGTCATCAACAACCGCATCTTCGATTCTCTCACCGACCTCGATCGCTCGCTTGCGCCGTCGTCGTCGACCTCAACAACTCGCCCTCCAAGTCCGATTTCACTCCTCTCTCACACCGCCATCGACCTCGATTGCGGTCGCCGTCAACAATTGCATCTCCGATTCTCTCACCAACCTCCACCGCTCGGTTGTTGGTGTCGTCGACCTCAACAAGTCCGATGGGCGGCGGCGGTGACAGGAGTCCCGCGAAAGTTGGCCGAATCCGATACGGTGACGGCTCCCACGAAGTCTCATAGGGCTCTCTCTCTCTCTCTCTCTCTAAGTAACAAAGACTCTCCGAGTCTCCCTTCTCCCTTTCATGTACTGAAACTTTCATTTCCTCTATTCACTTTCACACCCGATCGTCTCGCTTCTGTCATGGCCGAGGCCTTGGCGAAGCTCACCGACTCTCTCTACTCCGACTCCAAGCCCATCGCCGCCACTGATCTCTTGCTTCGGCTGCGCTCCGACTCCGACTCCATCAGACCGGGGCTCCAGAACCTTCTCCTGATTCTAAAACGCGGCGTCGAGGCCGACGCAGACGGCAAGCTAGGGCTCCAATCATGGACGGATTCGCAAATTCAAGCTGTATATTCCCTCGCCTACGCCGTTGTCTCCGCCTCTCGATCTCTCTCAGTGGAGCAAGCGGAACCAATAATTGTGGCCACTGTGCAATTGTCTCTGGAGTTTGCTGTATGTTATCTGGAAAGATCAGATTTCGGCAGCGAAGACATGAGTATTCAGAATAACATGGTGCAACTTTTGGAGATATCATTGGTTGATGGAATGGATAAAGCACCTGAGGCACTGAAGCCTTTCCCTCTAGATAGCCTTGCAGACTTGTCAATATCTGTTACTGGCAGTTCTAGTGGTACTGAGTTTGATAATCATATTAAGTGTGGCCCTCAAGGTGCCAATTGCTCAAGGGCAGAGAAACCGGTGGATCACCTTTTTATGTCTTTAGCTTCTGAGTGCATGCAGTCTGATAGGCAGACCACTCGATTTGGTGGGCCTACTTTCCACCAGGATCTGAACAAGTTGGTTTTTTTATCCCAGCATTGGGCAGTTGCTCATGTTGGGTGTATTCAACGTTTGATTTTGCTCTGCAAACAACTTATTGTACTCCCAGATGTGTTTGATGAGAAGTTGTCTGGGACAAGCTTCTGCAAGAGACTGTCCATCACTTTGAGGATTTTAAAGCTACTTGGAAGTCTTGCAAAGGACATCCCGTATATTGAATATGACGCCTCTTTGGTGCAAGCAGTTGGCTCTCTTGCTGATGCACTTCCCGGGTTGTTTAGACCTGGATTTGAGTTTGTAAACAGCCATGTTCCAGTCGAGGGTAGTTTTGAGAGCCTCAGTCTGTTGCTATTGGAAGACTTCATTGAACTTGTCCGGGTTACTTTCTGCAACAGCAGTGTATTTTTGAACATCCAAGTCTGCGTGATAGCTTCAATACTGGACAACTTAGATTCTTCTCTATGGAGATACAACAATTCTGCTGCTAACTTGAAGCCCCCACTAGCTTATTTTCCGCGGATTGTTATTTACATATTGATGCTCATTCATGACCTCAAGAGACAGACTAATCGGGCTGTCAATTGGAAGGAGTTTGGGACAGAACTTATCGGCGGTAACATCCGTTTTCTTGATTCCCCTTCATGCTTGGTTCATTCTGAGAAGGTTTCTTTACTTCAGAGATACACATTTGAACAACTCGTGAAGATAATCTTCCCTTCCTCAAATCAGTGGATGGACAATCTGCTGCATCTTTTATTTTTCCTTCATTCTGAGGGAGTGAAACTAAGGCCAAAAGTGGAGAGGACATATTCTAGTTGTGCAAAAACTACTAGCAGTTCTGAAGTGGAAAATGTCGTTTGCCATGAAGATGAAGCCCTTTTTGGAGATCTTTTCTCTGAGAGTGGCCGGGGTTCTACAGATGGATATGATCAGCCACCTGTTGTTGCTAATCCTAGCCCCAGCCAGAGTAATATGCCCATGGAAGCTGCTACAGAGTTGCTTAGTTTTCTTAAAGTGTGCATCTTCTCTCCTGAATGGTACCCGTCTTTTTTTGAGGATAGCTGCACGAAGCTTAGCAACAGCCATATAGATATTTTTCTGTACTTACTCCAAGGTCAGGGATGCTCTGAGGAGAGGAGCCCAGAGTGCTATTCCATTTCACAAGAAGAGAGAAAAATTGGCCAGGTCCATGAACTTTGCTTCGACTTGTTGCAGGACCTTGTCACACGTCATGCTTTATCTGATTCATTGGAAGAGTACTTGGTTGGAAGAATTTTGAATGTTGAGAATGATATTTTTGCTTATAATAGTCGGACCCTTACCTTACTGGCTCGCATCCTTTTCTGTAGGGTGGGTTTGGCTGGTAGCCCGTTGAGAGACCAAATTTTCCGGGCCTTTGTGGATTATATTATTGAGAAGACAAAAGCCATCTCTTTGAAATGTTCTACCTTTAAAGAACTGCTTGAGGCCCTTCCATCAGTTTTTCATATTGAGATTCTTCTTATGGCATTTCACTTATCGTCTGAAGAGGAGAAAGCATTGCATGCAAACTTAATATTTTCCACTCTCAGAGCAATTGGTACTCCACCTTTGGGTCTGAACGGTGCACATTTGTCTTGTTGGGCTTTACTGGTTTCAAGGTTGATTGTACTGCTTCGTCATATGATATTCTATCCACAGACATCTCCTTCGTCTTTACTTGTACATCTACGGTCCAAGTTGAGGGAAGCTCCACACTCAAGTTCACAGCTTGGCATGAATGATCATTTGTCATCCTGGGTTTCAGTTGTATGCAAGAATGTAATGAGTGCTTGGTTTGAAGAAGAGCCTGATATCAGTCCCTTGATTCACCAATTGATTGATATATCGGCCCTTCCTGCTTCGCTGTCTATAGATGGTCTGAATATTGACAGCTTATGCTTGAGTTGGGATGACATCTGTTCAACCATGTCATCCATTATTGGGTTCTGGAAAGATAAGAAGGCTGCAGTGGTGGAGGATCTTATTGTCGAAAGATATATTTTTGTACTTTGTTGGGATTTTCCAACCATGGGTACTTCAAAGCACAATCAGATTCCTTTTTGGAGTGATCCACAGGCTCTTGACATTTCTGACATGGAAAATTTCTTTTACTTAAGCCATTCAATTCTAGGCAGTCATGCTTCTAACTTTTCTGAAGTTATAGTTCATCTGCTTCAACACTTGGATGCTGAACACATACCCGGGCACATTGAGGAGTTAGGCTGGGGTTTTTTGAGAAATGCTATATGGTTGTCTTTGGCGGGAGGCTTGCTTGATGTTGGCATCTGTAGGTATGGTGTGAAGAATACAGTCCCAGGAGTTGGGACAAACTGGATGCCGAACATGTCCAAGGACAGCGAGTATATCACTGTTGCTGAAGGGATGGTTGCCTCCTTAGTGGCTGCTGGTCAACTTTCATCGTTGTTCAAGATGATTTCATCTTTGTTGAATAAATATCTACAAGTTTATCAGAAAGCTTTCATTGCTACCTTTAGTAATAGCCAGAATGATGCTAATGGGTTTTCACCGCTATTGCTTTTTAAACATTCTGGATTTGACATATGCCTTCAGGATGAGCTTGAAAAGACTGGAACGTGTTCTTTTCGCCTGGAGTCTGTTCTTGATCTCTTGGTGAAATTTGATGCTATTATTGATAAACGAGCTTCAGGAATTTTGTGTAGGACCACATGGGAATGTATGTTGCGTGGTTTCCCTCTTAATCTTCAAACTCCTAGTGGAATCCTTCTTTCTTGCATCCTTAACATAAGGCAGATCATTTCCATTCTGGTTGGTCTGCTTAAAGTAAAAGATGCCGTGGGAAATGTCTGCTTGGAGAGTGATGTACTTCGTCAAATTCTGGATTCAGTAGTGACAATCAAGTTCGACAGGATCTTCGAAAGTGTTCATGGGAAATGTGAAACTATGTATGACAGCTTGAGTGCGGGCTTGGTAGGGCCAGAATATTCCAATTTGATTCTACTGGAGCAACTGGAGCGGTTTTTACGGGATATCAATTCCGAAGGTGTAAGTGACAGCAGTATCCATGAGTGCATAATCATCAAGGCTATTGATACGATGGATAGCTTAAGGAAAGACCCCACCAAGGTTGATATCTTTAAATTTTATCTTGGTATGGATGGCGTTTCAGATCAGGTGAAGGAGCTTTTCAGTTTGCAACGTGGTGACCTGCTGGTTTTTATTGACTCACTACATAATTGTTACTCGGAAACAGTCAACGTAAAGGTTCTTGGATTTTTTGTTGATCTACTGAGTGGAGACCTGTGCCCTGATCTTAAACAGAAGATGCAAAACAAATTTCTCAGCATGGACTTGCTTCAACTGTCCAAATGGTTAGAGAAGAGGCTTTTAGGTTCCGTTATGGAAGCTTCAGATGGAGTTAATGGTGCAAAAGGAAGTCCTCTCTCTCTCAGGGAGTCGACCATGAACTTTATTTTATCCCTTGTATCCTCACCTTCTGAACTGCAATCAGTGGAACTCCAGAGTCATATTTTTGAAGCTGTGCTGGTTTCCCTCGATCCTGCCTTTTTGCAGTTTGATATTCATGTTGCCAAATCATTTTTCCATTTTGTTGTTCAACTATCCAAGGGGGATACTTCTCTGAAATTGCTTTTAAAAAGAACTATAATGCTGATGGAGAAGCTGGCGGGCAATGATTCTTTGCTACCAGGCCTGAAGTTTCTTTTTGGGTTTTTGGAAAGTGTGTTAAGTGATTGTGGGTCTGGTAGGAATACCCCGGAAAGGTCATTTGGGAAGTCTCTGTCTGGCAATACCCATGGTGTGGGACCTACATCTTCAAGGCAAGTAGGATCAAGGAAGAACTCTGAGACATTGGTTCTTTCTACTAATCAGGAAGGCAGGTCAATGGCTCTTGAATGTGATGCAACTTCTTTAGATGAGGATGAGGATGATGGAACTTCTGATGGTGAGGTGGCTAGCCTGGATAAGGATGATGAAGAGGATACCAACAGCGATAGGGCCCTTGCTTCTAAAGTTTGCACATTTACTTCTAGTGGTAGCAATTTCATGGAGCAGCATTGGTACTTCTGTTATACATGTGATCTGACCGTCTCAAAAGGCTGTTGCTCTGTGTGTGCAAAAGTTTGTCATCGTGGTCATCGTGTTGTTTATTCTCGCTCCAGTCGTTTCTTTTGTGATTGTGGAGCTGGGGGTGTTAGAGGAAGCAACTGTCAATGCTTAAAACCACGAAAATTCACTGGTGTTAGTAGTGGCCCGGTCCGCAGTGCTAGTAATTTTCAGTCCTTTTTACCCTTTGTGGAAGATGGAGAGCAGCTACCAGAAAGTGATTCAGATCTTGATGAGGATACTGGTACAGATATAGATAACTCTCTCAGACTTTCTATCCCAAAAGAGCTTCAAGATGGAATCAGACCATTGCTTGAAGAACTTGATGTGGAAGGTAAGGTGCTTGAGCTTTGCTCCTCATTGTTCCCTTATATAACTAGTAAAAGGGACTCCATCTTGTCAAAAGATAACAAAATCATTCTTGGCAAAGACAAGGTGCTTTCTTTTGGGGTTGATCTCTTGCAATTGAAGAAGGCATACAAAAGTGGGTCCTTAGACCTGAAGATAAAAGCAGACTATTCAAATGCCAAGGAACTTAAATCACATTTAGCTAGTGGATCTCTTGTCAAATCCTTGCTTAGTGTCAGTATTCGAGGGCGACTTGCTGTCGGAGAAGGTGATAAAGTTGCAATATTTGATGTTGGGCAGTTGATTGGACAAGCCACCATTGCACCTGTGACTGCAGACAAGACCAATGTCAAACCCCTATCTAAGAATGTTGTCCGCTTTGAAATTGTGCATCTTACTTTCAATCTAGTGGTGGAGAATTATCTTGCAGTAGCAGGTTATGAAGATTGCCAGGTTCTCACCTTGAATCCTCGTGGTGAAGTGACTGATCGTCTTGCCATTGAGTTGGCACTGCAGGGTGCATATATCAGAAGGGTAGACTGGGTTCCAGGTTCCCAGGTTCAATTAATGGTAGTTACCAACAGGTTTGTCAAAATATATGATCTATCTCAGGATAACATCAGTCCCATACACTACTTTACGCTATCAGATGATATGATTGTGGATGCAACCCTTCTTGTGGCATCTCATGGAAGGACGTTTCTAATTGTTCTTTCCGAACATGGAAGGTTGTTGAGGCTAGAGTTGTCAGTGGAAGGTAATGTCGGGGCTACACCTTTGAAGGAAGTAATCCAGATACAGGATAGAGAGATAGATGCGAAGGGCTCATCTTTGTACTTTTCATCGGCGTACAAGTTACTTTTCCTATCCTATCAGGATGGGACTACTTTGGTGGGACGGCTAAGCCCGGATGCGACTTCTTTGTGTGAAGTATCCACTATATATGAGGACCAAGATGGTAAACTGCGGCCTGCTGGACTTCATCGTTGGAAGGAATTGCTGGCTGGCAGTGGGCTCTTTGTTTGCTTCTCTACCATCAAATTAAACTCTGCAATTGCTGTATCAATTGGAGCAGATGATTTATTTGCACAGAACCTGCGACATGCAGTGGGCTCGACTTCACCTTTAGTGGGAGTAACTGCATATAAGCCATTATCTAAAGATAAGATTCATTGTCTTGTCTTACATGATGATGGTAGCCTTCAAATCTACTCGCATGTTCCAGTGGGAGTTGATGCTGGTGCTAGTGCAACAGCAGAGAAAGTAAAAAAATTGGGTTCCGGTATCCTCAGCAGTAAGGCTTATGCTGGTGTTAACCCTGAATTTCCCCTTGATTTTTTTGAGAAAACATTGTGCATAACAGCAGATGTGAAACTGGGTGGTGATGTTATCAGAAATGGTGATTCTGAAGGAGCTAAGCAGAGCTTGGCATCTGAGGATGGCTTTCTAGAGAGTCCTAGCCCGGCAGGCTTTAAGATATCTGTCTTCAACTCAAACCCCGATATCATCATGGTTGGTTTTCGTGTGCATGTTGGTAATACATCAGCAAGTCATATACCTTCTGATATTACTATATTCCATAGGGTGATTAAATTAGATGAAGGTATGCGGTCTTGGTATGATATTCCATTTACAGTTGCTGAGTCACTCCTTGCTGATGAAGAGTTCACAATCTGTGTTGGACCATCCTTCAATGGATCAGCTCTACCTAGAATTGATTGTCTTGAAGTGTATGGTAGAGCTAAAGATGAATTTGGTTGGAAAGAAAAAATGGATGCTGTTCTGGATATGGAAGCACGTGTGCTTGGTTGTAATTCCTTGCTTGCAGGATCTGGGAAAAAACACCGGTCAATGCAGTCTGCTCCTATACAGGAGCAGGTTATAGCAGATGGCCTTAAGCTTCTGTCCAGGATTTATTCGTTGTGTCGGTCTCAAGGTTGCTCAAGAGTTGAAGAAGTTAATCTAGAGTTGAGCAAACTAAGATGCAAGCAATTATTAGAAAACATATTTGAAAGTGATCAAGAGCCCTTGTTGCAGGCAGCTGCTTGTCGTGTCTTGCAGGCTGTTTACCCCAAAAAAGACATATACTGCAATGTCAAGGATAGCATGCGGCTTTCTGGGGTGGTGAAATCGACGTCTGTACTCTCTTCCAGGCTTGGGGTCGGTGGTACTGCAGGAACTTGGATAGTTGAAGAGTTCACAGCCCAGATGCGTGCAGTATCTAAGATTGCACTGCACCGTCGCTCTAACCTGGCTACTTTCTTAGAGATAAATGGTTCTGAAGTTGTGGATGGGCTCATTCAAGTTTTGTGGGGAATTTTGGACTTAGAGCAGCTTGACACACAAACAATGAACAACATTGTCATATCTTCTGTGGAACTGATTTATTGTTATGCTGAATGCTTGGCTTTACATGGAAAGGATATGGGGGTGCACTCTGTTGGGCCTGCTGTTTCATTATTCAAAAAGCTTCTCTTTTCACCCAATGAGGCTGTCCAGACATCAACCAGCTTAGCTATATCTTCAAGGTTGCTTCAGGTTCCATTTCCAAAGCAAACAATGTTGGCAACAGATGATGCTGCAGAAATTGCAGTTTCCGCTCCTGTGCATGCTGATACGACTGGTGGAAACGCCCAAGTCATGATTGAAGAAGATTCCATCACTTCTTCTGTTCAATATTGTTGTGATGGTTGCACCACTGTTCCTATACTTAGACGGCGATGGCATTGTACTGTTTGTCCTGATTTTGATCTGTGTGAGGCATGTTATGAAGTACTGGATGCCGACCGTCTTCCTCCACCACACTCTAGAGATCATCCTATGACAGCAATACCCATTGAAGTGGAATCATTAGGGGGAGATGGCAATGAGTTCCACTTCACACCAGATGATGCAAGTGATTCAACAATGTTGCCAATTACTGCAGATTCCAGGACCCAAAGTTCTACTCCATCAATTCATGTCCTTGAACCCAGTGAGTCTGGGGAGTTTTCTGCTTCAGTGAATGACCCAGTATCAATTTCTGCTTCAAAACGAGCTTTGAATTCCCTAATCCTGTCTGAACTTCTTGAACAATTAAAAGGATGGATGCACTCAACCTCTGGGGTACGGGCAATTCCTGTTATGCAGCTTTTCTACAGATTGTCATCTGCTGTTGGTGGACCTTTTATAGACATTTCAAAGCCTGAGAGCTTAGATTTAGAGAAATTAATTAGATGGTTTCTGGATGAGCTCAATCTCAACCAACCATTTGCTGGCAAATCCCGCTCTTCTTTTGGGGAAGTTGCAATTCTTATATTCATGTTCTTCACTTTGATGCTAAGAAACTGGCACCAGCCTGGGAGTGATAGTTCCATGCCAAAACCCAGTGGGACAACAGATGTGCATGATAAAAGTGTCATCCAAATTTCGCCCTCCACTTCAACTGCTGCTTCATCTTCCTTGGATGATCAAGAGAAAAATGACTTTGCGTCTCAGCTGGTTCGTGCTTGCAGTTCTCTTAGGCAACAGTCTGTTGTCAATTACTTAATGGACATACTGCAGCAGTTAGTGCATGTTTTCAAGTCTCCTTCTGCAAGTTATGAAAATGCAGGACCAGGTTCTGGCTGTGGAGCTTTGTTAACAGTTCGAAGAGATCTAGCTGCCGGTAATTTTTCTCCTTTCTTTTCAGACTCATATGCAAAAGCCCATCGGGCAGATATTTTTATGGACTACCATAGGTTGCTGTTGGAAAATACCTTCCGGCTGGTATATACCTTGGTCAGACCAGAAAAGCAAGACAAGACTGGGGACAAAGAGAAGGTTTCAAAAGTTACTTCGGGAAAGGATCTGAAGCTAGATGGATATCAAGATGTTCTCTGCAGTTACATCAACAATCCTCACACAACATTTGTAAGGAGATACGCTAGGAGGCTTTTCCTTCATCTCTGTGGAAGCAAAACTCACTATTATAGTGTTCGAGACTCTTGGCAGTTCTCAAATGAGATGAAAAAACTTTTCAAACATGTAAACAAATCTGGTGGGTTTCAAAATCCTTTGTCATATGAAAGAAGTGTAAAGATTGTCAAGTGCCTTTCTACTATGGCTGAAGTAGCTGCAGCACGGCCTCGGAACTGGCAGAGGTACTGTTTGAGGCATTCTGATTTTTTACCATTCTTGATTAACGGAGTGTTCTATCTTGGAGAAGAGTCCGTTATTCAGATCTTGAAGCTGTTAAATCTGTCATTTTACACTGGAAAGGATATGGGCCATTCATCACAGAAAAGTGAAGCTGTGGATTCAGGTCTTAATTCAAACAAATCAGTGACACAATCTCAGGATCCAAAGAAGAAGAAGAAAAGTGAAGAAGGAGCAGAATCTAGTGTTGAGAAGTCCTATGTGGATATGGAGTCGGTGATAGATATCTTTAGTGACAAGGATGGAGATGTCTTGAAGCAATTCATTGATTGCTTTTTGCTGGAATGGAATTCTAGCTCTGTACGTGTAGAGGCCAAGTGTGTTCTATATGGTGTCTGGCATCATGCGAAACAGTCATTCAAGGAAGCTATGTTGATGGCTCTCTTGCAGAAAGTCAAATTTCTGCCAATGTATGGTCAAAATATTGTTGAGTATACCGAACTTGTCACATGGTTTCTGGGTAAAGTGCCAGATATCAGCTCAAAGCAAAACAGCAGTGAACTTGTGGATCGATGCTTAACCCCTGATGTCATTAGATGCATCTTTGAGACACTTCATTCACAAAATGAGCTTGTAGCTAATCATCCAAATTCCCGCATTTACAATACTCTAAGTGGATTAGTTGAATTTGATGGTTACTATCTTGAGAGTGAGCCTTGTGTTGCCTGCAGCTCTCCAGAAGTTCCATACAGCAGGATGAAGCTAGAAAGTCTGAAATCTGAAACAAAATTCACTGACAACCGCATTATAGTGAAATGCACCGGAAGTTACACCATCCAGACAGTGACCATGAATGTCCATGATGCGAGGAAGTCTAAATCAGTGAAAGTTTTGAATCTGTATTACAATAATAGGCCTGTGGCTGACTTGTCAGAATTGAAAAATAATTGGTCTCTGTGGAAGCGTGCCAAGAGTTGTCATCTTGCTTTCAATCAAACTGAATTGAAGGTGGACTTTCCCATTCCAATAACAGCCTGCAACTTCATGATTGAGCTGGATTCCTTCTATGAAAATCTTCAGGCTTTGTCTCTTGAACCATTGCAATGCCCACGTTGCAGTCGACCTGTGACCGATAAGCATGGAATATGTAGCAATTGCCATGAGAATGCATATCAATGCCGGCAATGCCGGAACATCAATTATGAAAATCTGGATTCCTTTTTATGCAATGAGTGTGGGTACAGCAAATATGGTCGATTTGAGTTCAACTTCATGGCAAAGCCAAGTTTTGCTTTTGATGATATGGAGAATGACGAAGATATGAAGAGAGGGTTGGCTGCTATAGAAACTGAATCAGAGAATGCTCATAGGAGGTATCAGCAACTTTTAGGGTTCAAGAAGCCTCTCCTTAAGATTGTATCAAGTGTTGGTGAGAATGAAATAGACTCACAACAGAAGGATTCTGTGCAGCAAATGATGGTTTCCTTACCTGGGCCTGCATGTAAGATTAATCGTAAAATAGCTCTTCTTGGTGTCTTATATGGGGAGAAGTGCAAAGCAGCTTTTGATTCTGTCAGCAAAAGTGTTCAAACACTGCAAGGGTTACGTCGGGTTTTGATGAATTATTTGCACCAGAAACACTCTGATAATGGTGTGGGTGCCTCAAGATTTGTGGTTTCTAGGTCTCCGAATAATTGTTATGGCTGTGCTATTACATTTGTGACACAGTGTCTTGAGATATTACAGGTTCTGTCAAAGCATGCAAATTCCAAGAAACAACTTGTTGGTGCTGGCATCTTAACTGAACTGTTTGAAAACAATATTCATCAAGGTCCTAAAACGGCTCGTGTCCAAGCTAGAGCAGTTCTTTGTGCATTTTCTGAGAGTGATACGAATGCAGTGACTGAGTTGAACAGCTTAATACAGAAAAAGGTGATGTACTGCCTTGAACATCATCGCTCTATGGACATTGCTCTGGCCACCCGTGAAGAGTTGTCATTGCTGTCAGAAGTATGTTCTCTTGGTGATGAATTTTGGGAATCAAGGTTGCGTGTCGTTTTTCAGCTGTTATTTTCTTCCATCAAATTGGGAGCTAAGCATCCTGCAATTTCTGAGCACATTATTCTTCCTTGTCTGAGGATTATATCTCAGGCATGTACTCCTCCAAAACCTGATGTACCAGATAAAGAGCCTAGCACAGGAAAAGCTACTACTGGTTCGCAGATCAAGGATGAAAGTAATTCTAATATTTCTGGATCTATGGGTGGACTTGGTGGTGGGAGTAAGCCCACTTCAGAATCATTGGATAAAAACTGGGATGCATCTCAAAAGACTCAGGATATTCAATTGTTAAGTTATTCAGAGTGGGAGAAGGGAGCGTCATATCTTGATTTTGTTAGAAGGCAGTACAAAGTGTCCCAGGCTGTAAAAGGTGGTAGCCAGAGGCCTCGACCTCAAAGGCAAGATTTCCTGGCTCTGAAATATGCACTCAGGTGGAAGAGGCGTGCTAGCAAGACAACAAAGAATGACTTACCAGCATTTGAGCTGGGCTCATGGGTCACAGAACTTGTTCTTAGTGCTTGTTCTCAATCAATAAGGTCCGAGATGTGCATGTTGATCAGTCTGCTGTGTGCCCAAAGTACATCTAGGCGATTTCGGTTATTGAACTTACTAGTGTCTTTGCTACCGGCAACTCTTACTGCTGGTGAAAGTGCTGCCGAATATTTTGAGTCGCTGTTCAAGATGATAGAGTCAGAAGATGCTCGCCTGTTCTTGACTGTGTGTGGATGTCTGCGTACAATTTGTAAGCTAATCACTCAAGAAGTGGGCAACGTTGAGTCTCAGGAAAGAAGCCTGCATATTGACATCTCACAAGGTTTCATCCTTCACAAGCTTATAGAGATGCTTGGTAAATTCTTGGAGGTGCCAAATATTAGATCCAGATTCATGCGAGACAATCTGCTCTCAGAAATTCTTGAGGCGCTTATTGTTATTCGTGGCTTGGTGGTGCAGAAGACAAAGTTAATTAGTGATTGCAATCGTCTTCTCAAAGATCTTTTAGATAGCCTTCTGCTTGAAAGCAGTGAAAACAAGCGGCAGTTCATTCGGGCATGTATTTTTGGTTTGCAAAACCATGGGGAGGAGAGTAAAGGACGAACTTGTCTGTTTATCCTGGAGCAGCTCTGCAATCTGATATGCCCATCAAAGCCAGAGCCGGTGTATCTGCTGGTTCTAAACAAGGCACATACACAAGAAGAATTCATCAGGGGATCTATGACAAAGAATCCTTACTCTAGTTCTGAGATTGGTCCATTGATGCGTGATGTGAAGAATAAAATTTGTCATCAGTTGGATCTGTTGGGACTTATTGAAGATGACTATGGGATGGAATTGTTAGTTGCTGGGAACATTATCTCCCTCGATCTGACCGTAGCTCTAGTGTACGAGCAAGTCTGGAAGAAGTCCAATCAATCTTCAAATGCAATGGCTAACTCTACATTATTATCTCCTAATGCTGTTTCGTCAGCTAGAGACTCTCCACCTATGACAGTGACATATCGGCTTCAGGGATTAGATGGTGAAGCTACTGAGCCCATGATTAAAGAATTGGAAGAAGATAGAGAGGAGTCACAAGATCCGGAGGTTGAGTTTGCCATTGCAGGTGCTGTTCGTGAATATGGTGGCTTAGAAATTATATTGAGCATGATCCAGCGTTTGCGGGAGAACTTCAAGTCCAACCAAGAGCAGTTGGTAGCTGTTCTGAATCTTTTAATGCACTGTTGCAAAATAAGAGAGAATAGACGGGCCTTGCTGAGGTTAGGAGCTTTAGGTCTACTTCTTGAAACTGCGAGACATGCCTTCTCTGTGGATGCAATGGAGCCAGCTGAAGGCATACTTCTGATTGTTGAGAGTCTGACACTTGAAGCTAATGAAAGTGACAACATTAGTATCACGCAGAGTGCTCTTACTGTCACCAGTGAAGAGACAGGTGAACAGGCCAAGAAAATAGTCCTCATGTTTCTGGAAAGATTATCTCATCCTTCAGGCCTTAAAAAATCAAACAAACAGCAGAGGAACACTGAGATGGTTGCCAGAATCTTGCCCTACTTGACATATGGTGAACCTGCTGCAATGGAGGCACTTATCCAACACTTCAGCCCTCCTTTGCAAGACTGGAGAGAATACGATCGGCTGCAAGAAGCACATCAAGAGAACCCGAAAGATGACAACATTGCCCAGCAAGCTGCCAAGCAGAGGTTCACCTTGGAGAATTTTGTAAGAGTTTCCGAGTCTCTTAAAACAAGCTCCTGTGGAGAGCGATTGAAAGACATTATTCTTGAGAGGGGTATTACTGGTGTTGCAGTTAGACATCTGAGAGATAGTTTTTCAGTTGCTGGACAGGCAGGCTTTAGGTCAAGTGCAGAATGGGCAATGGGTTTAAAACTGCCTTCTGTCCCACTGATACTGTCTATGCTAAGGGGCTTATCGACAGGACATTTGGCTACTCAAAAGTGTATTGATGATGGAGATATATTACCTTTGCTTCATGCTTTGGAAGGTGTCCCTGGGGAAAATGAGATCGGAGCAAGGGCTGAAAACTTGTTGGACACACTTGCAAATAAGGAGGGAAAAGGAGATGGTTATTTGGAGGAGAAAGTGCGGGGGTTGAGACTCGCCACAAGGGATGAGATGAGGCGCAGAGCTTTGAGAAAGAGAGAGGAATTGCTTCAGCGGCTTGGAATGCGACAAGAGCTAGCATCAGATGGTGGTGAGCGTATTGTTGTTGCTCGGCCACTACTTGAGGGTTTGGAAGATGTGGAGGAGGAGGAGGATGGCTTGGCATGCATGGTTTGCCGAGAGGGTTACAGTTTGAGGCCTACTGACTTGCTTGGTGTTTACTCTTTTAGCAAGCGAGTGAATCTAGGTGCAGGGACGTCTGGAAGTGCTCGGGGGGAGTGTGTCTATACAACTGTTAGTTATTTCAATATTATTCATTTCCAGTGCCATCAGGAAGCCAAGAGAGCTGATGCCGCACTGAAGAATCCAAAGAAAGAGTGGGAAGGAGCGACTCTCAGAAACAATGAATCTCTTTGCAATTCCTTGTTCCCTGTGAGAGGTCCATCTGTTCCTTCATCACAGTATAGTCGCTATGTAGAGCAGTACTGGGACAACCTCAACACTCTTGGACGTGCTGATGGAAGCCGTCTTCGGCTGTTGACCTATGACATTGTTCTGATGCTAGCTCGATTTGCTACTGGGGCATCATTTAGTACACATAGCAGAGGTGGTGGAAGGGAAAGCAACTCCAGATTCCTTCCTTTCATGATCCAAATGGCTCGCCACCTTCTTGATCAGGGAAGCTCATCTCAGCGTCCTGCAATGGCCAAGTCTGTGTCAACATATTTAACATCTTCTGGTTTAGATACTAGACCTACCACTCCTGGAACACAACCTTCTATGGGATCCGAAGAAACTGTCCAATTTATGATGGTGAACTCACTTCTTTCAGAATCGCATGAAGCCTGGCTGCAACACCGCCGTGCCTTCTTGCAGCGTGGAATTTACCATGCATACATGCAGCATACTCATGGTCGGTCAGCAGGCCGCACGCCATCCAGTTCATCAGCTATAGTCAGGATAGAGTCTGGAAATACTAGCCCAGGTCCTAGTGCAGAAATCATGGGTGCCGATGAGCTTTTGACTGTCGTTCGACCAATGCTCGTCTACACTGGCCTGATTGAGCAGCTGCAACGTTTCTTCAAGGTCAAAAAAGCACCAGCCAAAGCGACATCGTCAGCCAGAAAAGAAGCTAGTTCTTCTACTACAGTCCCTCAAGGGGAAGATGATTCTGGAGGCTTGGAAGGTTGGGAAGTAGTGATGAAAGAGAGGCTTCTGAATGTGAGCGAGATGGTAGAGTTCTCGAAGGAGTTGTTGTCATGGCTCGACGAGATGAGTTCTGCAAGTGATCTGCAGGAGGCTTTCGACATAATTGGTGTATTGGCTGATGTGCTGTCTGGTGGCGTTACACAATGCGAGGACTTTGTGCGAGCTGCAATCAATGCAGGGAGAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006810 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009826 GO:0009914 GO:0009926 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010101 GO:0010102 GO:0010229 GO:0010311 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042221 GO:0043207 GO:0044424 GO:0044444 GO:0044464 GO:0048281 GO:0048364 GO:0048367 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0060560 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

E3_UbLigase_R4 ZZ

Protein Analysis

5275

Amino Acids

584.94

Weight (kDa)

5.83

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	2771 - 2803	1.6e-08	Zinc finger, ZZ type
UBR4	PF24079	3671 - 3796	1.5e-33	E3 ubiquitin-protein ligase UBR4-like domain
E3_UbLigase_R4	PF13764	4343 - 5249	0.0	E3 ubiquitin-protein ligase UBR4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02260 AT3G02260 AT3G02260 AT3G02260
fragaria_vesca	FvH4_6g46320 FvH4_6g46320
malus_domestica	MD09G1075600.v1.1 MD17G1066300.v1.1
prunus_persica	Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1
pyrus_communis	pycom09g00280 pycom09g00290 pycom09g00300 pycom17g06650 pycom17g06660 pycom17g06670 pycom17g06680
rosa_chinensis	RchiOBHm_Chr2g0164791
rosa_laevigata	RLG00000021489
rosa_multiflora	Rmu_sc0000946.1_g000029
rosa_roxburghii	Rroxscaffold_2G00086300
rosa_rugosa	Rorug02G0510400
rosa_samantha	Rh2AG578500 Rh2BG589800 Rh2CG560300 Rh2DG600000
rosa_wichuraiana	Rw2G048030

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2469
AarI	CACCTGC	1 cut(s)	13403
AasI	GACNNNNNNGTC	1 cut(s)	12912
AatII	GACGTC	2 cut(s)	7775, 14690
Acc36I	ACCTGC	7 cut(s)	4380, 5052, 6062, 6741, 7504, 13403, 13885
Acc65I	GGTACC	1 cut(s)	2202
AccB1I	GGYRCC	6 cut(s)	1055, 2202, 8967, 11411, 12676, 15437
AccB7I	CCANNNNNTGG	5 cut(s)	3506, 4984, 8891, 9239, 10226
AccBSI	CCGCTC	4 cut(s)	289, 4180, 8237, 8904
AccI	GTMKAC	9 cut(s)	91, 173, 307, 4622, 6174, 10247, 10873, 13585, 15477
AccII	CGCG	4 cut(s)	104, 352, 666, 1681
AccIII	TCCGGA	2 cut(s)	96, 13390
AclI	AACGTT	3 cut(s)	1234, 12585, 15505
AcoI	YGGCCR	9 cut(s)	85, 360, 525, 807, 2068, 2344, 11730, 14543, 15135
AcvI	CACGTG	1 cut(s)	7436
AcyI	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
AflII	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
AflIII	ACRYGT	7 cut(s)	2390, 3528, 3779, 5258, 7435, 9640, 10117
AgeI	ACCGGT	2 cut(s)	1081, 7482
AhdI	GACNNNNNGTC	4 cut(s)	5894, 6126, 9106, 11481
AhlI	ACTAGT	2 cut(s)	5666, 12424
AjiI	CACGTC	2 cut(s)	2393, 14942
AleI	CACNNNNGTG	2 cut(s)	12244, 15291
AloI	GAACNNNNNNTCC	8 cut(s)	8563, 8595, 8971, 9003, 13151, 13183, 13469, 13501
Alw21I	GWGCWC	6 cut(s)	2773, 8073, 8871, 11871, 13717, 14701
Alw44I	GTGCAC	2 cut(s)	2769, 8069
AlwNI	CAGNNNCTG	9 cut(s)	1174, 6733, 7277, 7469, 9239, 11503, 11657, 13418, 14147
Ama87I	CYCGRG	3 cut(s)	1433, 3386, 14700
Aor13HI	TCCGGA	2 cut(s)	96, 13390
ApaI	GGGCCC	1 cut(s)	5185
ApaLI	GTGCAC	2 cut(s)	2769, 8069
ArsI	GACNNNNNNTTYG	8 cut(s)	2836, 2868, 4061, 4093, 14233, 14265, 15213, 15245
AseI	ATTAAT	3 cut(s)	6203, 8846, 11262
AsiGI	ACCGGT	2 cut(s)	1081, 7482
Asp700I	GAANNNNTTC	8 cut(s)	959, 3662, 3781, 4086, 10073, 10827, 12321, 14478
Asp718I	GGTACC	1 cut(s)	2202
AspLEI	GCGC	4 cut(s)	163, 609, 12736, 14451
AsuII	TTCGAA	2 cut(s)	4080, 9265
AsuNHI	GCTAGC	4 cut(s)	5138, 12260, 14506, 14992
AvaI	CYCGRG	3 cut(s)	1433, 3386, 14700
AxyI	CCTNAGG	1 cut(s)	945
BaeGI	GKGCMC	6 cut(s)	2773, 3393, 4472, 5185, 8073, 12388
BaeI	ACNNNNGTAYC	6 cut(s)	4207, 4240, 5236, 5269, 13684, 13717
BalI	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
BamHI	GGATCC	2 cut(s)	9955, 15215
BanI	GGYRCC	6 cut(s)	1055, 2202, 8967, 11411, 12676, 15437
BarI	GAAGNNNNNNTAC	4 cut(s)	5750, 5782, 12028, 12060
BauI	CACGAG	3 cut(s)	1862, 6108, 11598
BbrPI	CACGTG	1 cut(s)	7436
BbsI	GAAGAC	8 cut(s)	879, 1527, 2588, 7114, 8420, 12773, 12788, 14951
Bbv12I	GWGCWC	6 cut(s)	2773, 8073, 8871, 11871, 13717, 14701
BbvCI	CCTCAGC	2 cut(s)	6926, 13565
BcgI	CGANNNNNNTGC	6 cut(s)	1124, 1158, 6732, 6766, 12839, 12873
BciVI	GTATCC	7 cut(s)	4235, 4660, 4789, 5158, 5521, 6580, 6932
BclI	TGATCA	6 cut(s)	2092, 2926, 7654, 9085, 12369, 15103
BcuI	ACTAGT	2 cut(s)	5666, 12424
BfoI	RGCGCY	1 cut(s)	12737
BfrI	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
BfuAI	ACCTGC	7 cut(s)	4380, 5052, 6062, 6741, 7504, 13403, 13885
BfuI	GTATCC	7 cut(s)	4235, 4660, 4789, 5158, 5521, 6580, 6932
BglI	GCCNNNNNGGC	2 cut(s)	7104, 9329
BglII	AGATCT	5 cut(s)	2050, 5515, 9271, 9837, 12805
BlpI	GCTNAGC	5 cut(s)	2237, 6539, 7053, 8149, 11847
BmcAI	AGTACT	3 cut(s)	2423, 8412, 14915
BmeRI	GACNNNNNGTC	4 cut(s)	5894, 6126, 9106, 11481
BmeT110I	CYCGRG	3 cut(s)	1433, 3386, 14700
BmgBI	CACGTC	2 cut(s)	2393, 14942
BmrI	ACTGGG	9 cut(s)	6187, 7022, 8604, 8642, 8997, 9432, 12076, 14926, 15018
BmtI	GCTAGC	4 cut(s)	5142, 12264, 14510, 14996
BmuI	ACTGGG	9 cut(s)	6187, 7022, 8604, 8642, 8997, 9432, 12076, 14926, 15018
BoxI	GACNNNNGTC	3 cut(s)	104, 344, 5984
BpiI	GAAGAC	8 cut(s)	879, 1527, 2588, 7114, 8420, 12773, 12788, 14951
BplI	GAGNNNNNCTC	8 cut(s)	2878, 2910, 5627, 5659, 12287, 12319, 14808, 14840
Bpu10I	CCTNAGC	3 cut(s)	6926, 13565, 14228
Bpu1102I	GCTNAGC	5 cut(s)	2237, 6539, 7053, 8149, 11847
Bpu14I	TTCGAA	2 cut(s)	4080, 9265
Bsa29I	ATCGAT	1 cut(s)	10324
BsaAI	YACGTR	2 cut(s)	7436, 10118
BsaBI	GATNNNNATC	6 cut(s)	5514, 8385, 8782, 9480, 10037, 12789
BsaHI	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
BsaI	GGTCTC	5 cut(s)	2535, 4455, 7572, 10710, 11442
BsaWI	WCCGGW	6 cut(s)	96, 1081, 6917, 7482, 10574, 13390
Bse118I	RCCGGY	6 cut(s)	1081, 7482, 9281, 10932, 12439, 12967
Bse21I	CCTNAGG	1 cut(s)	945
Bse8I	GATNNNNATC	6 cut(s)	5514, 8385, 8782, 9480, 10037, 12789
BseAI	TCCGGA	2 cut(s)	96, 13390
BseCI	ATCGAT	1 cut(s)	10324
BseJI	GATNNNNATC	6 cut(s)	5514, 8385, 8782, 9480, 10037, 12789
BseSI	GKGCMC	6 cut(s)	2773, 3393, 4472, 5185, 8073, 12388
BseX3I	CGGCCG	1 cut(s)	85
BseYI	CCCAGC	7 cut(s)	1197, 2123, 3408, 5369, 12298, 13154, 13989
BsgI	GTGCAG	8 cut(s)	2212, 7856, 7872, 11240, 12782, 14193, 14700, 15444
Bsh1236I	CGCG	4 cut(s)	104, 352, 666, 1681
Bsh1285I	CGRYCG	7 cut(s)	88, 108, 151, 244, 508, 8425, 13942
BshNI	GGYRCC	6 cut(s)	1055, 2202, 8967, 11411, 12676, 15437
BshTI	ACCGGT	2 cut(s)	1081, 7482
BshVI	ATCGAT	1 cut(s)	10324
BsiEI	CGRYCG	7 cut(s)	88, 108, 151, 244, 508, 8425, 13942
BsiHKAI	GWGCWC	6 cut(s)	2773, 8073, 8871, 11871, 13717, 14701
BsiHKCI	CYCGRG	3 cut(s)	1433, 3386, 14700
BsmBI	CGTCTC	3 cut(s)	515, 5278, 9114
BsmI	GAATGC	6 cut(s)	8042, 9772, 10924, 11119, 11653, 14499
Bso31I	GGTCTC	5 cut(s)	2535, 4455, 7572, 10710, 11442
BsoBI	CYCGRG	3 cut(s)	1433, 3386, 14700
Bsp119I	TTCGAA	2 cut(s)	4080, 9265
Bsp120I	GGGCCC	1 cut(s)	5181
Bsp13I	TCCGGA	2 cut(s)	96, 13390
Bsp1407I	TGTACA	1 cut(s)	2866
Bsp1720I	GCTNAGC	5 cut(s)	2237, 6539, 7053, 8149, 11847
Bsp19I	CCATGG	5 cut(s)	39, 2142, 3213, 4978, 12886
BspDI	ATCGAT	1 cut(s)	10324
BspEI	TCCGGA	2 cut(s)	96, 13390
BspFNI	CGCG	4 cut(s)	104, 352, 666, 1681
BspHI	TCATGA	4 cut(s)	1711, 8277, 10797, 15075
BspMI	ACCTGC	7 cut(s)	4380, 5052, 6062, 6741, 7504, 13403, 13885
BspOI	GCTAGC	4 cut(s)	5142, 12264, 14510, 14996
BspQI	GCTCTTC	3 cut(s)	2982, 8911, 11283
BspT104I	TTCGAA	2 cut(s)	4080, 9265
BspT107I	GGYRCC	6 cut(s)	1055, 2202, 8967, 11411, 12676, 15437
BspTI	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
BspTNI	GGTCTC	5 cut(s)	2535, 4455, 7572, 10710, 11442
BsrBI	CCGCTC	4 cut(s)	289, 4180, 8237, 8904
BsrFI	RCCGGY	6 cut(s)	1081, 7482, 9281, 10932, 12439, 12967
BsrGI	TGTACA	1 cut(s)	2866
BssAI	RCCGGY	6 cut(s)	1081, 7482, 9281, 10932, 12439, 12967
BssNAI	GTATAC	1 cut(s)	10248
BssNI	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
BssSI	CACGAG	3 cut(s)	1862, 6108, 11598
Bst1107I	GTATAC	1 cut(s)	10248
Bst2BI	CACGAG	3 cut(s)	1862, 6108, 11598
BstACI	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
BstAFI	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
BstAPI	GCANNNNNTGC	5 cut(s)	2708, 8225, 9187, 14604, 15812
BstAUI	TGTACA	1 cut(s)	2866
BstBAI	YACGTR	2 cut(s)	7436, 10118
BstBI	TTCGAA	2 cut(s)	4080, 9265
BstDSI	CCRYGG	8 cut(s)	39, 102, 1679, 2142, 3213, 3999, 4978, 12886
BstEII	GGTNACC	1 cut(s)	4367
BstENI	CCTNNNNNAGG	4 cut(s)	5147, 11949, 13564, 14865
BstFNI	CGCG	4 cut(s)	104, 352, 666, 1681
BstH2I	RGCGCY	1 cut(s)	12737
BstHHI	GCGC	4 cut(s)	163, 609, 12736, 14451
BstMCI	CGRYCG	7 cut(s)	88, 108, 151, 244, 508, 8425, 13942
BstPAI	GACNNNNGTC	3 cut(s)	104, 344, 5984
BstPI	GGTNACC	1 cut(s)	4367
BstSLI	GKGCMC	6 cut(s)	2773, 3393, 4472, 5185, 8073, 12388
BstUI	CGCG	4 cut(s)	104, 352, 666, 1681
BstV2I	GAAGAC	8 cut(s)	879, 1527, 2588, 7114, 8420, 12773, 12788, 14951
BstXI	CCANNNNNNTGG	3 cut(s)	6142, 8479, 11839
BstZ17I	GTATAC	1 cut(s)	10248
BstZI	CGGCCG	1 cut(s)	85
Bsu15I	ATCGAT	1 cut(s)	10324
Bsu36I	CCTNAGG	1 cut(s)	945
BsuI	GTATCC	7 cut(s)	4235, 4660, 4789, 5158, 5521, 6580, 6932
BsuTUI	ATCGAT	1 cut(s)	10324
BtgI	CCRYGG	8 cut(s)	39, 102, 1679, 2142, 3213, 3999, 4978, 12886
BtgZI	GCGATG	3 cut(s)	562, 8371, 11693
BtrI	CACGTC	2 cut(s)	2393, 14942
BveI	ACCTGC	7 cut(s)	4380, 5052, 6062, 6741, 7504, 13403, 13885
CaiI	CAGNNNCTG	9 cut(s)	1174, 6733, 7277, 7469, 9239, 11503, 11657, 13418, 14147
CciI	TCATGA	4 cut(s)	1711, 8277, 10797, 15075
CfoI	GCGC	4 cut(s)	163, 609, 12736, 14451
Cfr10I	RCCGGY	6 cut(s)	1081, 7482, 9281, 10932, 12439, 12967
Cfr42I	CCGCGG	2 cut(s)	105, 1682
Cfr9I	CCCGGG	2 cut(s)	1433, 3386
ClaI	ATCGAT	1 cut(s)	10324
CpoI	CGGWCCG	2 cut(s)	99, 5440
CseI	GACGC	7 cut(s)	33, 658, 689, 1397, 9096, 12120, 15113
CsiI	ACCWGGT	1 cut(s)	9232
CspAI	ACCGGT	2 cut(s)	1081, 7482
CspI	CGGWCCG	2 cut(s)	99, 5440
DraI	TTTAAA	6 cut(s)	1341, 2617, 3727, 4303, 4818, 14193
DrdI	GACNNNNNNGTC	1 cut(s)	12912
DriI	GACNNNNNGTC	4 cut(s)	5894, 6126, 9106, 11481
DseDI	GACNNNNNNGTC	1 cut(s)	12912
EaeI	YGGCCR	9 cut(s)	85, 360, 525, 807, 2068, 2344, 11730, 14543, 15135
EagI	CGGCCG	1 cut(s)	85
Eam1105I	GACNNNNNGTC	4 cut(s)	5894, 6126, 9106, 11481
EciI	GGCGGA	1 cut(s)	751
Ecl136II	GAGCTC	1 cut(s)	8869
EclXI	CGGCCG	1 cut(s)	85
Eco147I	AGGCCT	6 cut(s)	533, 4875, 10669, 12199, 13800, 14629
Eco31I	GGTCTC	5 cut(s)	2535, 4455, 7572, 10710, 11442
Eco32I	GATATC	9 cut(s)	915, 2998, 4195, 4297, 7116, 7141, 9482, 10039, 10288
Eco52I	CGGCCG	1 cut(s)	85
Eco53kI	GAGCTC	1 cut(s)	8869
Eco72I	CACGTG	1 cut(s)	7436
Eco81I	CCTNAGG	1 cut(s)	945
Eco88I	CYCGRG	3 cut(s)	1433, 3386, 14700
Eco91I	GGTNACC	1 cut(s)	4367
EcoICRI	GAGCTC	1 cut(s)	8869
EcoNI	CCTNNNNNAGG	4 cut(s)	5147, 11949, 13564, 14865
EcoO109I	RGGNCCY	9 cut(s)	2380, 2632, 4988, 5181, 5182, 5778, 8571, 11585, 15416
EcoO65I	GGTNACC	1 cut(s)	4367
EcoRI	GAATTC	3 cut(s)	8680, 10102, 13010
EcoRV	GATATC	9 cut(s)	915, 2998, 4195, 4297, 7116, 7141, 9482, 10039, 10288
EcoT22I	ATGCAT	5 cut(s)	10355, 10924, 12076, 14600, 15325
Esp3I	CGTCTC	3 cut(s)	515, 5278, 9114
FauI	CCCGC	8 cut(s)	357, 3439, 4120, 4843, 8909, 10415, 13464, 14406
FauNDI	CATATG	5 cut(s)	2826, 3746, 9313, 9679, 13867
FbaI	TGATCA	6 cut(s)	2092, 2926, 7654, 9085, 12369, 15103
FblI	GTMKAC	9 cut(s)	91, 173, 307, 4622, 6174, 10247, 10873, 13585, 15477
GlaI	GCGC	4 cut(s)	162, 608, 12735, 14450
GsaI	CCCAGC	7 cut(s)	1201, 2127, 3412, 5373, 12302, 13158, 13993
HaeII	RGCGCY	1 cut(s)	12737
HgaI	GACGC	7 cut(s)	33, 658, 689, 1397, 9096, 12120, 15113
HhaI	GCGC	4 cut(s)	163, 609, 12736, 14451
Hin1I	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
Hin6I	GCGC	4 cut(s)	161, 607, 12734, 14449
HinP1I	GCGC	4 cut(s)	161, 607, 12734, 14449
HindIII	AAGCTT	7 cut(s)	1303, 2234, 3660, 4569, 7535, 8105, 12644
HpaI	GTTAAC	2 cut(s)	6952, 9258
Hsp92I	GRCGYC	5 cut(s)	44, 669, 1389, 7772, 14687
HspAI	GCGC	4 cut(s)	161, 607, 12734, 14449
Kpn2I	TCCGGA	2 cut(s)	96, 13390
KpnI	GGTACC	1 cut(s)	2206
KroI	GCCGGC	1 cut(s)	10932
KroNI	GCCGGC	1 cut(s)	10934
Ksp22I	TGATCA	6 cut(s)	2092, 2926, 7654, 9085, 12369, 15103
KspAI	GTTAAC	2 cut(s)	6952, 9258
KspI	CCGCGG	2 cut(s)	105, 1682
LguI	GCTCTTC	3 cut(s)	2982, 8911, 11283
MabI	ACCWGGT	1 cut(s)	9232
MbiI	CCGCTC	4 cut(s)	289, 4180, 8237, 8904
MlsI	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
MluNI	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
Mox20I	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
Mph1103I	ATGCAT	5 cut(s)	10355, 10924, 12076, 14600, 15325
MroI	TCCGGA	2 cut(s)	96, 13390
MroNI	GCCGGC	1 cut(s)	10932
MroXI	GAANNNNTTC	8 cut(s)	959, 3662, 3781, 4086, 10073, 10827, 12321, 14478
MscI	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
Msp20I	TGGCCA	4 cut(s)	809, 2346, 11732, 15137
MspA1I	CMGCKG	8 cut(s)	104, 1681, 7679, 9115, 11818, 13637, 14485, 15499
MspCI	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
Mva1269I	GAATGC	6 cut(s)	8042, 9772, 10924, 11119, 11653, 14499
MvnI	CGCG	4 cut(s)	104, 352, 666, 1681
NaeI	GCCGGC	1 cut(s)	10934
NcoI	CCATGG	5 cut(s)	39, 2142, 3213, 4978, 12886
NdeI	CATATG	5 cut(s)	2826, 3746, 9313, 9679, 13867
NgoMIV	GCCGGC	1 cut(s)	10932
NheI	GCTAGC	4 cut(s)	5138, 12260, 14506, 14992
NmeAIII	GCCGAG	3 cut(s)	553, 14521, 14633
NsiI	ATGCAT	5 cut(s)	10355, 10924, 12076, 14600, 15325
NspV	TTCGAA	2 cut(s)	4080, 9265
OliI	CACNNNNGTG	2 cut(s)	12244, 15291
PaeI	GCATGC	6 cut(s)	1123, 2711, 7747, 8249, 11516, 14598
PagI	TCATGA	4 cut(s)	1711, 8277, 10797, 15075
PaqCI	CACCTGC	1 cut(s)	13403
PasI	CCCWGGG	1 cut(s)	14318
PceI	AGGCCT	6 cut(s)	533, 4875, 10669, 12199, 13800, 14629
PciI	ACATGT	3 cut(s)	3528, 5258, 9640
PciSI	GCTCTTC	3 cut(s)	2982, 8911, 11283
PcsI	WCGNNNNNNNCGW	7 cut(s)	161, 386, 750, 5320, 5344, 10870, 13179
PctI	GAATGC	6 cut(s)	8042, 9772, 10924, 11119, 11653, 14499
PdiI	GCCGGC	1 cut(s)	10934
PdmI	GAANNNNTTC	8 cut(s)	959, 3662, 3781, 4086, 10073, 10827, 12321, 14478
PflFI	GACNNNGTC	2 cut(s)	2384, 15544
PflMI	CCANNNNNTGG	5 cut(s)	3506, 4984, 8891, 9239, 10226
PfoI	TCCNGGA	4 cut(s)	7544, 8567, 12924, 15193
PinAI	ACCGGT	2 cut(s)	1081, 7482
Ple19I	CGATCG	3 cut(s)	151, 508, 13942
PmaCI	CACGTG	1 cut(s)	7436
PmlI	CACGTG	1 cut(s)	7436
Ppu21I	YACGTR	2 cut(s)	7436, 10118
PpuMI	RGGWCCY	6 cut(s)	2380, 4988, 5778, 8571, 11585, 15416
PscI	ACATGT	3 cut(s)	3528, 5258, 9640
PshAI	GACNNNNGTC	3 cut(s)	104, 344, 5984
PshBI	ATTAAT	3 cut(s)	6203, 8846, 11262
PsiI	TTATAA	1 cut(s)	2469
Psp124BI	GAGCTC	1 cut(s)	8871
Psp1406I	AACGTT	3 cut(s)	1234, 12585, 15505
Psp5II	RGGWCCY	6 cut(s)	2380, 4988, 5778, 8571, 11585, 15416
PspCI	CACGTG	1 cut(s)	7436
PspEI	GGTNACC	1 cut(s)	4367
PspFI	CCCAGC	7 cut(s)	1197, 2123, 3408, 5369, 12298, 13154, 13989
PspOMI	GGGCCC	1 cut(s)	5181
PspPPI	RGGWCCY	6 cut(s)	2380, 4988, 5778, 8571, 11585, 15416
PsrI	GAACNNNNNNTAC	2 cut(s)	6165, 6197
PstNI	CAGNNNCTG	9 cut(s)	1174, 6733, 7277, 7469, 9239, 11503, 11657, 13418, 14147
PsyI	GACNNNGTC	2 cut(s)	2384, 15544
PvuI	CGATCG	3 cut(s)	151, 508, 13942
PvuII	CAGCTG	5 cut(s)	7679, 9115, 11818, 13637, 15499
Rsr2I	CGGWCCG	2 cut(s)	99, 5440
RsrII	CGGWCCG	2 cut(s)	99, 5440
SacI	GAGCTC	1 cut(s)	8871
SacII	CCGCGG	2 cut(s)	105, 1682
SalI	GTCGAC	5 cut(s)	90, 172, 306, 4621, 10872
SapI	GCTCTTC	3 cut(s)	2982, 8911, 11283
ScaI	AGTACT	3 cut(s)	2423, 8412, 14915
SexAI	ACCWGGT	1 cut(s)	9232
Sfr303I	CCGCGG	2 cut(s)	105, 1682
SfuI	TTCGAA	2 cut(s)	4080, 9265
SgrBI	CCGCGG	2 cut(s)	105, 1682
SmaI	CCCGGG	2 cut(s)	1435, 3388
SpeI	ACTAGT	2 cut(s)	5666, 12424
SphI	GCATGC	6 cut(s)	1123, 2711, 7747, 8249, 11516, 14598
SseBI	AGGCCT	6 cut(s)	533, 4875, 10669, 12199, 13800, 14629
SstI	GAGCTC	1 cut(s)	8871
StuI	AGGCCT	6 cut(s)	533, 4875, 10669, 12199, 13800, 14629
TaqII	GACCGA	3 cut(s)	7554, 10898, 15336
TspGWI	ACGGA	5 cut(s)	728, 1775, 4549, 9816, 9817
TspMI	CCCGGG	2 cut(s)	1433, 3386
Tth111I	GACNNNGTC	2 cut(s)	2384, 15544
Van91I	CCANNNNNTGG	5 cut(s)	3506, 4984, 8891, 9239, 10226
Vha464I	CTTAAG	4 cut(s)	3298, 4270, 7532, 11162
VneI	GTGCAC	2 cut(s)	2769, 8069
VspI	ATTAAT	3 cut(s)	6203, 8846, 11262
XagI	CCTNNNNNAGG	4 cut(s)	5147, 11949, 13564, 14865
XbaI	TCTAGA	4 cut(s)	967, 7084, 7600, 8444
XcmI	CCANNNNNNNNNTGG	2 cut(s)	8888, 14805
XmaI	CCCGGG	2 cut(s)	1433, 3386
XmiI	GTMKAC	9 cut(s)	91, 173, 307, 4622, 6174, 10247, 10873, 13585, 15477
XmnI	GAANNNNTTC	8 cut(s)	959, 3662, 3781, 4086, 10073, 10827, 12321, 14478
ZraI	GACGTC	2 cut(s)	7773, 14688
ZrmI	AGTACT	3 cut(s)	2423, 8412, 14915
Zsp2I	ATGCAT	5 cut(s)	10355, 10924, 12076, 14600, 15325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.