Auxin transport protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02260 AT3G02260 AT3G02260 AT3G02260 |
| fragaria_vesca | FvH4_6g46320 FvH4_6g46320 |
| malus_domestica | MD09G1075600.v1.1 MD17G1066300.v1.1 |
| prunus_persica | Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1 Prupe.3G248400_v2.0.a1 |
| pyrus_communis | pycom09g00280 pycom09g00290 pycom09g00300 pycom17g06650 pycom17g06660 pycom17g06670 pycom17g06680 |
| rosa_chinensis | RchiOBHm_Chr2g0164791 |
| rosa_laevigata | RLG00000021489 |
| rosa_multiflora | Rmu_sc0000946.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00086300 |
| rosa_rugosa | Rorug02G0510400 |
| rosa_samantha | Rh2AG578500 Rh2BG589800 Rh2CG560300 Rh2DG600000 |
| rosa_wichuraiana | Rw2G048030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1947 |
| Acc36I | ACCTGC | 4 cut(s) | 3858, 4530, 5540, 6219 |
| Acc65I | GGTACC | 1 cut(s) | 1680 |
| AccB1I | GGYRCC | 1 cut(s) | 1680 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2984, 4462 |
| AccBSI | CCGCTC | 1 cut(s) | 3658 |
| AccI | GTMKAC | 2 cut(s) | 4100, 5652 |
| AccII | CGCG | 2 cut(s) | 144, 1159 |
| AclI | AACGTT | 1 cut(s) | 712 |
| AclWI | GGATC | 9 cut(s) | 573, 644, 657, 2649, 2726, 3560, 4193, 4498, 5332 |
| AcoI | YGGCCR | 5 cut(s) | 3, 285, 1546, 1822, 6117 |
| AcyI | GRCGYC | 2 cut(s) | 147, 867 |
| AflII | CTTAAG | 1 cut(s) | 3748 |
| AflIII | ACRYGT | 5 cut(s) | 1868, 3006, 3257, 4736, 6331 |
| AgeI | ACCGGT | 1 cut(s) | 559 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 4540, 5604 |
| AhlI | ACTAGT | 2 cut(s) | 2341, 5144 |
| AjiI | CACGTC | 1 cut(s) | 1871 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1506, 1538, 4226, 4258, 4413, 4445 |
| Alw21I | GWGCWC | 2 cut(s) | 2251, 3651 |
| Alw26I | GTCTC | 9 cut(s) | 241, 787, 1195, 1232, 2013, 3933, 4443, 4502, 4756 |
| Alw44I | GTGCAC | 1 cut(s) | 2247 |
| AlwI | GGATC | 9 cut(s) | 573, 644, 657, 2649, 2726, 3560, 4193, 4498, 5332 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 6211 |
| Ama87I | CYCGRG | 2 cut(s) | 422, 2864 |
| ApaI | GGGCCC | 1 cut(s) | 4663 |
| ApaLI | GTGCAC | 1 cut(s) | 2247 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2314, 2346, 3539, 3571 |
| AseI | ATTAAT | 1 cut(s) | 5681 |
| AsiGI | ACCGGT | 1 cut(s) | 559 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 437, 3140, 3259, 3564 |
| Asp718I | GGTACC | 1 cut(s) | 1680 |
| AspLEI | GCGC | 1 cut(s) | 87 |
| AsuII | TTCGAA | 1 cut(s) | 3558 |
| AsuNHI | GCTAGC | 1 cut(s) | 4616 |
| AvaI | CYCGRG | 2 cut(s) | 422, 2864 |
| AvaII | GGWCC | 8 cut(s) | 1828, 1858, 1956, 2355, 3345, 4466, 5256, 6064 |
| BaeGI | GKGCMC | 4 cut(s) | 2251, 2871, 3950, 4663 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3685, 3718, 4714, 4747 |
| BalI | TGGCCA | 2 cut(s) | 287, 1824 |
| BamHI | GGATCC | 1 cut(s) | 649 |
| BanI | GGYRCC | 1 cut(s) | 1680 |
| BanII | GRGCYC | 7 cut(s) | 117, 180, 1784, 4663, 5942, 6132, 6230 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5228, 5260 |
| BauI | CACGAG | 1 cut(s) | 5586 |
| BbsI | GAAGAC | 3 cut(s) | 357, 1005, 2066 |
| Bbv12I | GWGCWC | 2 cut(s) | 2251, 3651 |
| BbvCI | CCTCAGC | 1 cut(s) | 6404 |
| BceAI | ACGGC | 3 cut(s) | 215, 4552, 6029 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6210, 6244 |
| BciVI | GTATCC | 7 cut(s) | 3713, 4138, 4267, 4636, 4999, 6058, 6410 |
| BclI | TGATCA | 2 cut(s) | 1570, 2404 |
| BcoDI | GTCTC | 9 cut(s) | 241, 787, 1195, 1232, 2013, 3933, 4443, 4502, 4756 |
| BcuI | ACTAGT | 2 cut(s) | 2341, 5144 |
| BfmI | CTRYAG | 8 cut(s) | 1557, 1632, 1987, 2532, 2628, 2950, 5373, 5448 |
| BfrI | CTTAAG | 1 cut(s) | 3748 |
| BfuAI | ACCTGC | 4 cut(s) | 3858, 4530, 5540, 6219 |
| BfuI | GTATCC | 7 cut(s) | 3713, 4138, 4267, 4636, 4999, 6058, 6410 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 6582 |
| BglII | AGATCT | 2 cut(s) | 1528, 4993 |
| BlpI | GCTNAGC | 3 cut(s) | 1715, 6017, 6531 |
| BmcAI | AGTACT | 1 cut(s) | 1901 |
| Bme18I | GGWCC | 8 cut(s) | 1828, 1858, 1956, 2355, 3345, 4466, 5256, 6064 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 4540, 5604 |
| BmeT110I | CYCGRG | 2 cut(s) | 422, 2864 |
| BmgBI | CACGTC | 1 cut(s) | 1871 |
| BmrI | ACTGGG | 3 cut(s) | 4910, 5665, 6500 |
| BmtI | GCTAGC | 1 cut(s) | 4620 |
| BmuI | ACTGGG | 3 cut(s) | 4910, 5665, 6500 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5462 |
| BpiI | GAAGAC | 3 cut(s) | 357, 1005, 2066 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2356, 2388, 5105, 5137 |
| BpmI | CTGGAG | 6 cut(s) | 101, 326, 1585, 3293, 3674, 4145 |
| Bpu10I | CCTNAGC | 1 cut(s) | 6404 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1715, 6017, 6531 |
| Bpu14I | TTCGAA | 1 cut(s) | 3558 |
| BpuEI | CTTGAG | 8 cut(s) | 513, 529, 1181, 2126, 2365, 2584, 3619, 5132 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4992 |
| BsaHI | GRCGYC | 2 cut(s) | 147, 867 |
| BsaI | GGTCTC | 2 cut(s) | 2013, 3933 |
| BsaWI | WCCGGW | 2 cut(s) | 559, 6395 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 29, 59, 83, 99, 113, 129 |
| Bse118I | RCCGGY | 3 cut(s) | 559, 2010, 6119 |
| Bse3DI | GCAATG | 4 cut(s) | 3144, 4339, 5075, 5433 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4992 |
| BseJI | GATNNNNATC | 1 cut(s) | 4992 |
| BseMI | GCAATG | 4 cut(s) | 3144, 4339, 5075, 5433 |
| BseRI | GAGGAG | 5 cut(s) | 1787, 1792, 2186, 2891, 5113 |
| BseSI | GKGCMC | 4 cut(s) | 2251, 2871, 3950, 4663 |
| BseYI | CCCAGC | 4 cut(s) | 675, 2262, 2886, 4847 |
| BsgI | GTGCAG | 1 cut(s) | 1690 |
| Bsh1236I | CGCG | 2 cut(s) | 144, 1159 |
| BshNI | GGYRCC | 1 cut(s) | 1680 |
| BshTI | ACCGGT | 1 cut(s) | 559 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2251, 3651 |
| BsiHKCI | CYCGRG | 2 cut(s) | 422, 2864 |
| BslFI | GGGAC | 9 cut(s) | 790, 2466, 2960, 3001, 4479, 5168, 5724, 6010, 6024 |
| BsmAI | GTCTC | 9 cut(s) | 241, 787, 1195, 1232, 2013, 3933, 4443, 4502, 4756 |
| BsmFI | GGGAC | 9 cut(s) | 790, 2466, 2960, 3001, 4479, 5168, 5724, 6010, 6024 |
| Bso31I | GGTCTC | 2 cut(s) | 2013, 3933 |
| BsoBI | CYCGRG | 2 cut(s) | 422, 2864 |
| Bsp119I | TTCGAA | 1 cut(s) | 3558 |
| Bsp120I | GGGCCC | 1 cut(s) | 4659 |
| Bsp1407I | TGTACA | 1 cut(s) | 5964 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1715, 6017, 6531 |
| Bsp19I | CCATGG | 4 cut(s) | 1620, 2691, 3477, 4456 |
| BspFNI | CGCG | 2 cut(s) | 144, 1159 |
| BspHI | TCATGA | 1 cut(s) | 1189 |
| BspMAI | CTGCAG | 2 cut(s) | 2632, 5452 |
| BspMI | ACCTGC | 4 cut(s) | 3858, 4530, 5540, 6219 |
| BspOI | GCTAGC | 1 cut(s) | 4620 |
| BspPI | GGATC | 9 cut(s) | 573, 644, 657, 2649, 2726, 3560, 4193, 4498, 5332 |
| BspQI | GCTCTTC | 2 cut(s) | 1803, 2460 |
| BspT104I | TTCGAA | 1 cut(s) | 3558 |
| BspT107I | GGYRCC | 1 cut(s) | 1680 |
| BspTI | CTTAAG | 1 cut(s) | 3748 |
| BspTNI | GGTCTC | 2 cut(s) | 2013, 3933 |
| BsrBI | CCGCTC | 1 cut(s) | 3658 |
| BsrDI | GCAATG | 4 cut(s) | 3144, 4339, 5075, 5433 |
| BsrFI | RCCGGY | 3 cut(s) | 559, 2010, 6119 |
| BsrGI | TGTACA | 1 cut(s) | 5964 |
| BssAI | RCCGGY | 3 cut(s) | 559, 2010, 6119 |
| BssNI | GRCGYC | 2 cut(s) | 147, 867 |
| BssSI | CACGAG | 1 cut(s) | 5586 |
| Bst2BI | CACGAG | 1 cut(s) | 5586 |
| Bst6I | CTCTTC | 7 cut(s) | 1285, 1803, 1890, 2163, 2460, 4016, 4632 |
| BstACI | GRCGYC | 2 cut(s) | 147, 867 |
| BstAFI | CTTAAG | 1 cut(s) | 3748 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2186 |
| BstAUI | TGTACA | 1 cut(s) | 5964 |
| BstBI | TTCGAA | 1 cut(s) | 3558 |
| BstDSI | CCRYGG | 5 cut(s) | 1157, 1620, 2691, 3477, 4456 |
| BstEII | GGTNACC | 1 cut(s) | 3845 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4625 |
| BstFNI | CGCG | 2 cut(s) | 144, 1159 |
| BstHHI | GCGC | 1 cut(s) | 87 |
| BstMAI | GTCTC | 9 cut(s) | 241, 787, 1195, 1232, 2013, 3933, 4443, 4502, 4756 |
| BstNSI | RCATGY | 5 cut(s) | 2189, 3010, 4740, 6221, 6335 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5462 |
| BstPI | GGTNACC | 1 cut(s) | 3845 |
| BstSFI | CTRYAG | 8 cut(s) | 1557, 1632, 1987, 2532, 2628, 2950, 5373, 5448 |
| BstSLI | GKGCMC | 4 cut(s) | 2251, 2871, 3950, 4663 |
| BstUI | CGCG | 2 cut(s) | 144, 1159 |
| BstV2I | GAAGAC | 3 cut(s) | 357, 1005, 2066 |
| BstX2I | RGATCY | 6 cut(s) | 649, 1528, 2641, 3552, 4993, 5324 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 5620 |
| BstYI | RGATCY | 6 cut(s) | 649, 1528, 2641, 3552, 4993, 5324 |
| BsuI | GTATCC | 7 cut(s) | 3713, 4138, 4267, 4636, 4999, 6058, 6410 |
| BtgI | CCRYGG | 5 cut(s) | 1157, 1620, 2691, 3477, 4456 |
| BtgZI | GCGATG | 2 cut(s) | 40, 2166 |
| BtrI | CACGTC | 1 cut(s) | 1871 |
| BtsI | GCAGTG | 6 cut(s) | 1045, 2637, 4930, 5624, 6130, 6228 |
| BveI | ACCTGC | 4 cut(s) | 3858, 4530, 5540, 6219 |
| CaiI | CAGNNNCTG | 1 cut(s) | 6211 |
| CciI | TCATGA | 1 cut(s) | 1189 |
| CfoI | GCGC | 1 cut(s) | 87 |
| Cfr10I | RCCGGY | 3 cut(s) | 559, 2010, 6119 |
| Cfr42I | CCGCGG | 1 cut(s) | 1160 |
| Cfr9I | CCCGGG | 1 cut(s) | 2864 |
| CseI | GACGC | 3 cut(s) | 136, 167, 875 |
| CspAI | ACCGGT | 1 cut(s) | 559 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 264, 299, 607, 642, 3751, 3786 |
| DraI | TTTAAA | 5 cut(s) | 819, 2095, 3205, 3781, 4296 |
| DriI | GACNNNNNGTC | 2 cut(s) | 4540, 5604 |
| EaeI | YGGCCR | 5 cut(s) | 3, 285, 1546, 1822, 6117 |
| Eam1104I | CTCTTC | 7 cut(s) | 1285, 1803, 1890, 2163, 2460, 4016, 4632 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 4540, 5604 |
| EarI | CTCTTC | 7 cut(s) | 1285, 1803, 1890, 2163, 2460, 4016, 4632 |
| EciI | GGCGGA | 1 cut(s) | 229 |
| Eco147I | AGGCCT | 2 cut(s) | 11, 4353 |
| Eco24I | GRGCYC | 7 cut(s) | 117, 180, 1784, 4663, 5942, 6132, 6230 |
| Eco31I | GGTCTC | 2 cut(s) | 2013, 3933 |
| Eco32I | GATATC | 4 cut(s) | 393, 2476, 3673, 3775 |
| Eco47I | GGWCC | 8 cut(s) | 1828, 1858, 1956, 2355, 3345, 4466, 5256, 6064 |
| Eco88I | CYCGRG | 2 cut(s) | 422, 2864 |
| Eco91I | GGTNACC | 1 cut(s) | 3845 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4625 |
| EcoO109I | RGGNCCY | 6 cut(s) | 1858, 2110, 4466, 4659, 4660, 5256 |
| EcoO65I | GGTNACC | 1 cut(s) | 3845 |
| EcoRV | GATATC | 4 cut(s) | 393, 2476, 3673, 3775 |
| EcoT38I | GRGCYC | 7 cut(s) | 117, 180, 1784, 4663, 5942, 6132, 6230 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1337, 1369, 2088, 2120, 6524, 6556 |
| FaqI | GGGAC | 9 cut(s) | 790, 2466, 2960, 3001, 4479, 5168, 5724, 6010, 6024 |
| FauI | CCCGC | 3 cut(s) | 2917, 3598, 4321 |
| FauNDI | CATATG | 2 cut(s) | 2304, 3224 |
| FbaI | TGATCA | 2 cut(s) | 1570, 2404 |
| FblI | GTMKAC | 2 cut(s) | 4100, 5652 |
| FriOI | GRGCYC | 7 cut(s) | 117, 180, 1784, 4663, 5942, 6132, 6230 |
| GlaI | GCGC | 1 cut(s) | 86 |
| GsaI | CCCAGC | 4 cut(s) | 679, 2266, 2890, 4851 |
| GsuI | CTGGAG | 6 cut(s) | 101, 326, 1585, 3293, 3674, 4145 |
| HgaI | GACGC | 3 cut(s) | 136, 167, 875 |
| HhaI | GCGC | 1 cut(s) | 87 |
| Hin1I | GRCGYC | 2 cut(s) | 147, 867 |
| Hin6I | GCGC | 1 cut(s) | 85 |
| HinP1I | GCGC | 1 cut(s) | 85 |
| HincII | GTYRAC | 4 cut(s) | 3074, 3898, 4101, 6430 |
| HindII | GTYRAC | 4 cut(s) | 3074, 3898, 4101, 6430 |
| HindIII | AAGCTT | 4 cut(s) | 781, 1712, 3138, 4047 |
| HpaI | GTTAAC | 1 cut(s) | 6430 |
| Hpy99I | CGWCG | 2 cut(s) | 152, 161 |
| HpyCH4IV | ACGT | 6 cut(s) | 712, 1870, 3257, 3841, 3900, 4688 |
| HpySE526I | ACGT | 6 cut(s) | 712, 1870, 3257, 3841, 3900, 4688 |
| Hsp92I | GRCGYC | 2 cut(s) | 147, 867 |
| HspAI | GCGC | 1 cut(s) | 85 |
| KpnI | GGTACC | 1 cut(s) | 1684 |
| KroI | GCCGGC | 1 cut(s) | 6119 |
| KroNI | GCCGGC | 1 cut(s) | 6121 |
| Ksp22I | TGATCA | 2 cut(s) | 1570, 2404 |
| KspAI | GTTAAC | 1 cut(s) | 6430 |
| KspI | CCGCGG | 1 cut(s) | 1160 |
| LguI | GCTCTTC | 2 cut(s) | 1803, 2460 |
| MaeII | ACGT | 6 cut(s) | 712, 1870, 3257, 3841, 3900, 4688 |
| MbiI | CCGCTC | 1 cut(s) | 3658 |
| MfeI | CAATTG | 6 cut(s) | 538, 1222, 2217, 2495, 5231, 6168 |
| MflI | RGATCY | 6 cut(s) | 649, 1528, 2641, 3552, 4993, 5324 |
| MlsI | TGGCCA | 2 cut(s) | 287, 1824 |
| MluNI | TGGCCA | 2 cut(s) | 287, 1824 |
| MmeI | TCCRAC | 7 cut(s) | 66, 114, 120, 1888, 1934, 2711, 6083 |
| Mox20I | TGGCCA | 2 cut(s) | 287, 1824 |
| MroNI | GCCGGC | 1 cut(s) | 6119 |
| MroXI | GAANNNNTTC | 4 cut(s) | 437, 3140, 3259, 3564 |
| MscI | TGGCCA | 2 cut(s) | 287, 1824 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1178, 1509, 2847, 3355, 6306 |
| Msp20I | TGGCCA | 2 cut(s) | 287, 1824 |
| MspA1I | CMGCKG | 1 cut(s) | 1159 |
| MspCI | CTTAAG | 1 cut(s) | 3748 |
| MunI | CAATTG | 6 cut(s) | 538, 1222, 2217, 2495, 5231, 6168 |
| MvnI | CGCG | 2 cut(s) | 144, 1159 |
| NaeI | GCCGGC | 1 cut(s) | 6121 |
| NcoI | CCATGG | 4 cut(s) | 1620, 2691, 3477, 4456 |
| NdeI | CATATG | 2 cut(s) | 2304, 3224 |
| NgoMIV | GCCGGC | 1 cut(s) | 6119 |
| NheI | GCTAGC | 1 cut(s) | 4616 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 6 cut(s) | 1864, 3532, 3692, 3845, 5443, 5596 |
| NspI | RCATGY | 5 cut(s) | 2189, 3010, 4740, 6221, 6335 |
| NspV | TTCGAA | 1 cut(s) | 3558 |
| PaeI | GCATGC | 1 cut(s) | 2189 |
| PagI | TCATGA | 1 cut(s) | 1189 |
| PceI | AGGCCT | 2 cut(s) | 11, 4353 |
| PciI | ACATGT | 3 cut(s) | 3006, 4736, 6331 |
| PciSI | GCTCTTC | 2 cut(s) | 1803, 2460 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 228, 4798, 4822 |
| PdiI | GCCGGC | 1 cut(s) | 6121 |
| PdmI | GAANNNNTTC | 4 cut(s) | 437, 3140, 3259, 3564 |
| PflFI | GACNNNGTC | 2 cut(s) | 101, 1862 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2984, 4462 |
| PinAI | ACCGGT | 1 cut(s) | 559 |
| PpuMI | RGGWCCY | 3 cut(s) | 1858, 4466, 5256 |
| PscI | ACATGT | 3 cut(s) | 3006, 4736, 6331 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5462 |
| PshBI | ATTAAT | 1 cut(s) | 5681 |
| PsiI | TTATAA | 1 cut(s) | 1947 |
| Psp1406I | AACGTT | 1 cut(s) | 712 |
| Psp5II | RGGWCCY | 3 cut(s) | 1858, 4466, 5256 |
| PspEI | GGTNACC | 1 cut(s) | 3845 |
| PspFI | CCCAGC | 4 cut(s) | 675, 2262, 2886, 4847 |
| PspOMI | GGGCCC | 1 cut(s) | 4659 |
| PspPPI | RGGWCCY | 3 cut(s) | 1858, 4466, 5256 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5643, 5675 |
| PstI | CTGCAG | 2 cut(s) | 2632, 5452 |
| PstNI | CAGNNNCTG | 1 cut(s) | 6211 |
| PsuI | RGATCY | 6 cut(s) | 649, 1528, 2641, 3552, 4993, 5324 |
| PsyI | GACNNNGTC | 2 cut(s) | 101, 1862 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1178, 1509, 2847, 3355, 6306 |
| SacII | CCGCGG | 1 cut(s) | 1160 |
| SalI | GTCGAC | 1 cut(s) | 4099 |
| SapI | GCTCTTC | 2 cut(s) | 1803, 2460 |
| ScaI | AGTACT | 1 cut(s) | 1901 |
| SfcI | CTRYAG | 8 cut(s) | 1557, 1632, 1987, 2532, 2628, 2950, 5373, 5448 |
| Sfr303I | CCGCGG | 1 cut(s) | 1160 |
| SfuI | TTCGAA | 1 cut(s) | 3558 |
| SgrBI | CCGCGG | 1 cut(s) | 1160 |
| SinI | GGWCC | 8 cut(s) | 1828, 1858, 1956, 2355, 3345, 4466, 5256, 6064 |
| SmaI | CCCGGG | 1 cut(s) | 2866 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1178, 1509, 2847, 3355, 6306 |
| SmlI | CTYRAG | 9 cut(s) | 528, 544, 1196, 2105, 2380, 2563, 3598, 3748, 5111 |
| SmoI | CTYRAG | 9 cut(s) | 528, 544, 1196, 2105, 2380, 2563, 3598, 3748, 5111 |
| SpeI | ACTAGT | 2 cut(s) | 2341, 5144 |
| SphI | GCATGC | 1 cut(s) | 2189 |
| SseBI | AGGCCT | 2 cut(s) | 11, 4353 |
| SspI | AATATT | 4 cut(s) | 2199, 2548, 3626, 5400 |
| StuI | AGGCCT | 2 cut(s) | 11, 4353 |
| TaiI | ACGT | 6 cut(s) | 715, 1873, 3260, 3844, 3903, 4691 |
| TatI | WGTACW | 8 cut(s) | 742, 1743, 1899, 2344, 2668, 3505, 5949, 5964 |
| TauI | GCSGC | 4 cut(s) | 62, 147, 168, 6085 |
| TseFI | GTSAC | 6 cut(s) | 1864, 3532, 3692, 3845, 5443, 5596 |
| Tsp45I | GTSAC | 6 cut(s) | 1864, 3532, 3692, 3845, 5443, 5596 |
| TspGWI | ACGGA | 5 cut(s) | 91, 206, 445, 1253, 4027 |
| TspMI | CCCGGG | 1 cut(s) | 2864 |
| Tth111I | GACNNNGTC | 2 cut(s) | 101, 1862 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2984, 4462 |
| Vha464I | CTTAAG | 1 cut(s) | 3748 |
| VneI | GTGCAC | 1 cut(s) | 2247 |
| VpaK11BI | GGWCC | 8 cut(s) | 1828, 1858, 1956, 2355, 3345, 4466, 5256, 6064 |
| VspI | ATTAAT | 1 cut(s) | 5681 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4625 |
| XbaI | TCTAGA | 2 cut(s) | 445, 6562 |
| XceI | RCATGY | 5 cut(s) | 2189, 3010, 4740, 6221, 6335 |
| XmaI | CCCGGG | 1 cut(s) | 2864 |
| XmiI | GTMKAC | 2 cut(s) | 4100, 5652 |
| XmnI | GAANNNNTTC | 4 cut(s) | 437, 3140, 3259, 3564 |
| ZrmI | AGTACT | 1 cut(s) | 1901 |