pycom17g07430

Belongs to the eIF-2B alpha beta delta subunits family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
5342686 .. 5344420
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1305 bp
ATGACTGTCTCCGTGGTTAAGATGCCTTCTGGGATTTCTGAGAAAGATGTTGATGCATCAACGGAAGTGCAAAGCGAGCGAGCTGGGAATTCGAAGCCACTGAAAGAGAAAACCACGAAAGCCGAAAGGCGGGCCCTTCAGGAAGCTCAACGAGCAGCTAAGGCCGCTGCGAAAGCTGATGGAGGTAAAACACCTTCTGTTGTTGCTTCTGCTTCGGCAGCAGCAAATGTGAAACCGCCTAAGGCCACGAAACTTGTGTCACAATCATCTGTGGCGGTATCTGAGAAGAAGGGCGGTGGCGGAGGTGGTGGCAGTGAACGTCCGCCTGAGAAAGAGAGGAAGAAAGAAGTTCCTCATCCGCGAATGCAATACGATGATAAGAGTCGTGTGGAGAAGGCGAAAAGGCGGTCGGTGGTTAAGCAAACTGAGGCCAGGAACAGGGTTGAGTTGTTCAGGCATTTGCCTCAATACGAGCATGGAACTCAGCTTCCTGATCTCGAGTCCAAGTTTTTCCAACTTGACCCTGTGCATCCTGCTGTTTATAAGGTTGGGTTACAGTATTTATCAGGAGATATATCAGGTGGTAATGCTCGTTGTATTGCCATGCTTCTAGCACTTCAGGAGGCCATTAAAGACTATTCGACACCACCAGAGAAAAACCTGAGTAGGGATTTGACAGCAAAAATAAGTAGTTACGTTTCATTTTTCAGTGAGTGCAGGCCACTTTCAATCACCATGGGGAATGCAATTCGGTTTCTGAAGAGCCGAATTGCCAAGTTACCTTTAACTATGTCCGAGTCAGAAGCAAAAGCATCTCTCCAGTCAGATATTGATCGGTTCATAGCCGAGAAGATTATACTTGCTGACAACGTGATAGTCAAGCATGCAGTTAGCAAAATCAGGGATGGTGATGTTCTTCTAACGTACGGGTCATCCTCTGCAGTTGAAATGTTGCTATTGCATGCCCATGAGCTTGGCAAACAGTTTCGCGTTGTGGTGGTAGACGCTCGTCCAAAGCTTGAAGGACAGCGTTTACTTCGTAGGTTGGTGGGAAAGGGCCTCAGCTGCACTTACACTCATATAAATGCTGCTTCCTATATCATGCATGAAGTTACTCGAGTTTTTCTAGGCGCTTCTTCAGTGCTCTCTAATGGAACAGTTTACTCAAGGGTTGGGACTGCTTGTGTTGCTATGGTAGCTCATGCATTCCGTGTACCTGTATTGGTATGTTGTGAGGCATATAAGTTTCATGAAAGGGTACAGCTTGATTCGATATGCTCTAATGAGCTCGGTATGCACTTGTGA

Protein Analysis

435

Amino Acids

47.38

Weight (kDa)

9.56

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IF-2B PF01008 192 - 430 6.1e-65 Initiation factor 2 subunit family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010726)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AccI GTMKAC 1 cut(s) 1002
AccII CGCG 2 cut(s) 361, 990
AciI CCGC 9 cut(s) 130, 165, 236, 275, 294, 300, 323, 359, 406
AcsI RAATTY 1 cut(s) 88
AcuI CTGAAG 4 cut(s) 122, 602, 779, 1122
AfaI GTAC 3 cut(s) 926, 1215, 1260
AfiI CCNNNNNNNGG 3 cut(s) 129, 438, 667
AgsI TTSAA 3 cut(s) 729, 947, 1022
AjnI CCWGG 1 cut(s) 431
AloI GAACNNNNNNTCC 2 cut(s) 472, 504
Alw21I GWGCWC 2 cut(s) 1146, 1290
Alw26I GTCTC 1 cut(s) 13
Ama87I CYCGRG 2 cut(s) 497, 1116
AoxI GGCC 7 cut(s) 132, 162, 243, 429, 624, 719, 1057
ApaI GGGCCC 1 cut(s) 136
ApeKI GCWGC 6 cut(s) 155, 167, 218, 221, 1065, 1088
ApoI RAATTY 1 cut(s) 88
ArsI GACNNNNNNTTYG 4 cut(s) 242, 274, 392, 424
AspLEI GCGC 1 cut(s) 1133
AspS9I GGNCC 3 cut(s) 132, 133, 1057
AsuHPI GGTGA 2 cut(s) 724, 920
AsuII TTCGAA 1 cut(s) 92
AvaI CYCGRG 2 cut(s) 497, 1116
AxyI CCTNAGG 1 cut(s) 240
BaeGI GKGCMC 1 cut(s) 136
BanII GRGCYC 2 cut(s) 136, 1290
BarI GAAGNNNNNNTAC 2 cut(s) 178, 210
Bbv12I GWGCWC 2 cut(s) 1146, 1290
BbvCI CCTCAGC 1 cut(s) 1061
BbvI GCAGC 6 cut(s) 154, 167, 230, 233, 1052, 1075
BccI CCATC 2 cut(s) 173, 899
BciT130I CCWGG 1 cut(s) 433
BcoDI GTCTC 1 cut(s) 13
BfaI CTAG 2 cut(s) 611, 1127
BfmI CTRYAG 1 cut(s) 939
BfoI RGCGCY 1 cut(s) 1134
BisI GCNGC 7 cut(s) 156, 165, 168, 219, 222, 1066, 1089
BlsI GCNGC 7 cut(s) 157, 166, 169, 220, 223, 1067, 1090
Bme1390I CCNGG 1 cut(s) 433
BmeT110I CYCGRG 2 cut(s) 497, 1116
BmgT120I GGNCC 3 cut(s) 132, 133, 1057
BmiI GGNNCC 1 cut(s) 134
BmrFI CCNGG 1 cut(s) 433
BmsI GCATC 5 cut(s) 12, 43, 65, 538, 821
BoxI GACNNNNGTC 1 cut(s) 1008
BpmI CTGGAG 1 cut(s) 803
Bpu10I CCTNAGC 2 cut(s) 159, 1061
Bpu14I TTCGAA 1 cut(s) 92
BpuEI CTTGAG 1 cut(s) 1150
BsaBI GATNNNNATC 1 cut(s) 831
BsaJI CCNNGG 2 cut(s) 12, 735
Bsc4I CCNNNNNNNGG 3 cut(s) 129, 438, 667
Bse1I ACTGG 1 cut(s) 820
Bse21I CCTNAGG 1 cut(s) 240
Bse8I GATNNNNATC 1 cut(s) 831
BseBI CCWGG 1 cut(s) 433
BseDI CCNNGG 2 cut(s) 12, 735
BseGI GGATG 4 cut(s) 355, 529, 910, 932
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 3 cut(s) 129, 438, 667
BseMII CTCAG 7 cut(s) 30, 273, 318, 417, 497, 653, 1075
BseNI ACTGG 1 cut(s) 820
BseSI GKGCMC 1 cut(s) 136
BseXI GCAGC 6 cut(s) 154, 167, 230, 233, 1052, 1075
BseYI CCCAGC 1 cut(s) 83
BsgI GTGCAG 2 cut(s) 736, 1051
Bsh1236I CGCG 2 cut(s) 361, 990
Bsh1285I CGRYCG 1 cut(s) 410
BshFI GGCC 7 cut(s) 134, 164, 245, 431, 626, 721, 1059
BsiEI CGRYCG 1 cut(s) 410
BsiHKAI GWGCWC 2 cut(s) 1146, 1290
BsiHKCI CYCGRG 2 cut(s) 497, 1116
BsiWI CGTACG 1 cut(s) 924
BslFI GGGAC 1 cut(s) 1189
BslI CCNNNNNNNGG 3 cut(s) 129, 438, 667
BsmAI GTCTC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 1189
BsmI GAATGC 3 cut(s) 369, 748, 1205
BsnI GGCC 7 cut(s) 134, 164, 245, 431, 626, 721, 1059
BsoBI CYCGRG 2 cut(s) 497, 1116
Bsp119I TTCGAA 1 cut(s) 92
Bsp120I GGGCCC 1 cut(s) 132
Bsp1286I GDGCHC 3 cut(s) 136, 1146, 1290
Bsp143I GATC 2 cut(s) 493, 832
Bsp19I CCATGG 1 cut(s) 735
BspACI CCGC 9 cut(s) 130, 165, 236, 275, 294, 300, 323, 359, 406
BspANI GGCC 7 cut(s) 134, 164, 245, 431, 626, 721, 1059
BspCNI CTCAG 7 cut(s) 31, 274, 319, 418, 496, 654, 1074
BspFNI CGCG 2 cut(s) 361, 990
BspHI TCATGA 1 cut(s) 1249
BspLI GGNNCC 1 cut(s) 134
BspMAI CTGCAG 1 cut(s) 943
BspQI GCTCTTC 1 cut(s) 755
BspT104I TTCGAA 1 cut(s) 92
BsrI ACTGG 1 cut(s) 820
BssECI CCNNGG 2 cut(s) 12, 735
BssMI GATC 2 cut(s) 493, 832
BssT1I CCWWGG 1 cut(s) 735
Bst2UI CCWGG 1 cut(s) 433
Bst4CI ACNGT 4 cut(s) 7, 558, 984, 1159
Bst6I CTCTTC 1 cut(s) 755
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 6 cut(s) 77, 81, 132, 719, 885, 963
BstDEI CTNAG 9 cut(s) 39, 159, 240, 282, 327, 426, 483, 662, 1061
BstDSI CCRYGG 2 cut(s) 12, 735
BstF5I GGATG 4 cut(s) 355, 529, 910, 932
BstFNI CGCG 2 cut(s) 361, 990
BstH2I RGCGCY 1 cut(s) 1134
BstHHI GCGC 1 cut(s) 1133
BstKTI GATC 2 cut(s) 496, 835
BstMAI GTCTC 1 cut(s) 13
BstMBI GATC 2 cut(s) 493, 832
BstMCI CGRYCG 1 cut(s) 410
BstNI CCWGG 1 cut(s) 433
BstNSI RCATGY 2 cut(s) 887, 965
BstPAI GACNNNNGTC 1 cut(s) 1008
BstSCI CCNGG 1 cut(s) 431
BstSFI CTRYAG 1 cut(s) 939
BstSLI GKGCMC 1 cut(s) 136
BstUI CGCG 2 cut(s) 361, 990
BstV1I GCAGC 6 cut(s) 154, 167, 230, 233, 1052, 1075
BstXI CCANNNNNNTGG 1 cut(s) 974
Bsu36I CCTNAGG 1 cut(s) 240
BsuRI GGCC 7 cut(s) 134, 164, 245, 431, 626, 721, 1059
BtgI CCRYGG 2 cut(s) 12, 735
BtsCI GGATG 4 cut(s) 355, 529, 910, 932
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 4 cut(s) 98, 319, 715, 1146
Cac8I GCNNGC 6 cut(s) 77, 81, 132, 719, 885, 963
CciI TCATGA 1 cut(s) 1249
CfoI GCGC 1 cut(s) 1133
Cfr13I GGNCC 3 cut(s) 132, 133, 1057
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 3 cut(s) 925, 1214, 1259
CspCI CAANNNNNGTGG 2 cut(s) 235, 270
CviQI GTAC 3 cut(s) 925, 1214, 1259
DdeI CTNAG 9 cut(s) 39, 159, 240, 282, 327, 426, 483, 662, 1061
DpnI GATC 2 cut(s) 495, 834
DpnII GATC 2 cut(s) 493, 832
Eam1104I CTCTTC 1 cut(s) 755
EarI CTCTTC 1 cut(s) 755
EciI GGCGGA 2 cut(s) 312, 315
Ecl136II GAGCTC 1 cut(s) 1288
Eco130I CCWWGG 1 cut(s) 735
Eco24I GRGCYC 2 cut(s) 136, 1290
Eco53kI GAGCTC 1 cut(s) 1288
Eco57I CTGAAG 4 cut(s) 122, 602, 779, 1122
Eco81I CCTNAGG 1 cut(s) 240
Eco88I CYCGRG 2 cut(s) 497, 1116
EcoICRI GAGCTC 1 cut(s) 1288
EcoO109I RGGNCCY 2 cut(s) 133, 1057
EcoRI GAATTC 1 cut(s) 88
EcoRII CCWGG 1 cut(s) 431
EcoT14I CCWWGG 1 cut(s) 735
EcoT22I ATGCAT 3 cut(s) 58, 1107, 1207
EcoT38I GRGCYC 2 cut(s) 136, 1290
ErhI CCWWGG 1 cut(s) 735
FaqI GGGAC 1 cut(s) 1189
FauI CCCGC 1 cut(s) 123
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 7 cut(s) 156, 165, 168, 219, 222, 1066, 1089
FokI GGATG 4 cut(s) 342, 516, 917, 919
FriOI GRGCYC 2 cut(s) 136, 1290
Fsp4HI GCNGC 7 cut(s) 156, 165, 168, 219, 222, 1066, 1089
FspBI CTAG 2 cut(s) 611, 1127
GlaI GCGC 1 cut(s) 1132
GluI GCNGC 7 cut(s) 156, 165, 168, 219, 222, 1066, 1089
GsaI CCCAGC 1 cut(s) 87
GsuI CTGGAG 1 cut(s) 803
HaeII RGCGCY 1 cut(s) 1134
HaeIII GGCC 7 cut(s) 134, 164, 245, 431, 626, 721, 1059
HgaI GACGC 1 cut(s) 1013
HhaI GCGC 1 cut(s) 1133
Hin6I GCGC 1 cut(s) 1131
HinP1I GCGC 1 cut(s) 1131
HindIII AAGCTT 1 cut(s) 1016
HinfI GANTC 4 cut(s) 382, 500, 797, 1268
HphI GGTGA 2 cut(s) 724, 920
Hpy166II GTNNAC 5 cut(s) 317, 1003, 1034, 1162, 1214
Hpy188I TCNGA 6 cut(s) 40, 283, 759, 796, 802, 826
Hpy188III TCNNGA 6 cut(s) 140, 491, 497, 567, 620, 1250
Hpy8I GTNNAC 5 cut(s) 317, 1003, 1034, 1162, 1214
HpyAV CCTTC 6 cut(s) 36, 146, 204, 283, 388, 1016
HpyCH4III ACNGT 4 cut(s) 7, 558, 984, 1159
HpyCH4IV ACGT 4 cut(s) 319, 696, 870, 923
HpyF3I CTNAG 9 cut(s) 39, 159, 240, 282, 327, 426, 483, 662, 1061
HpySE526I ACGT 4 cut(s) 319, 696, 870, 923
HspAI GCGC 1 cut(s) 1131
Kzo9I GATC 2 cut(s) 493, 832
LguI GCTCTTC 1 cut(s) 755
Lsp1109I GCAGC 6 cut(s) 154, 167, 230, 233, 1052, 1075
LweI GCATC 5 cut(s) 12, 43, 65, 538, 821
MaeI CTAG 2 cut(s) 611, 1127
MaeII ACGT 4 cut(s) 319, 696, 870, 923
MaeIII GTNAC 5 cut(s) 258, 552, 692, 777, 1111
MalI GATC 2 cut(s) 495, 834
MboI GATC 2 cut(s) 493, 832
MboII GAAGA 6 cut(s) 298, 352, 772, 862, 908, 1128
MhlI GDGCHC 3 cut(s) 136, 1146, 1290
MluCI AATT 3 cut(s) 88, 747, 768
MlyI GAGTC 3 cut(s) 391, 509, 806
MmeI TCCRAC 1 cut(s) 538
Mph1103I ATGCAT 3 cut(s) 58, 1107, 1207
MseI TTAA 4 cut(s) 18, 417, 630, 785
MslI CAYNNNNRTG 2 cut(s) 966, 1083
MspA1I CMGCKG 2 cut(s) 167, 1065
MspR9I CCNGG 1 cut(s) 433
Mva1269I GAATGC 3 cut(s) 369, 748, 1205
MvaI CCWGG 1 cut(s) 433
MvnI CGCG 2 cut(s) 361, 990
NcoI CCATGG 1 cut(s) 735
NdeII GATC 2 cut(s) 493, 832
NlaIV GGNNCC 1 cut(s) 134
NmeAIII GCCGAG 1 cut(s) 871
NmuCI GTSAC 1 cut(s) 258
NsiI ATGCAT 3 cut(s) 58, 1107, 1207
NspI RCATGY 2 cut(s) 887, 965
NspV TTCGAA 1 cut(s) 92
PaeI GCATGC 2 cut(s) 887, 965
PaeR7I CTCGAG 2 cut(s) 497, 1116
PagI TCATGA 1 cut(s) 1249
PciSI GCTCTTC 1 cut(s) 755
PctI GAATGC 3 cut(s) 369, 748, 1205
PfeI GAWTC 1 cut(s) 1268
Pfl23II CGTACG 1 cut(s) 924
PkrI GCNGC 7 cut(s) 157, 166, 169, 220, 223, 1067, 1090
PleI GAGTC 3 cut(s) 390, 508, 805
PpsI GAGTC 3 cut(s) 390, 508, 805
PshAI GACNNNNGTC 1 cut(s) 1008
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 1290
Psp6I CCWGG 1 cut(s) 431
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 1 cut(s) 431
PspLI CGTACG 1 cut(s) 924
PspN4I GGNNCC 1 cut(s) 134
PspOMI GGGCCC 1 cut(s) 132
PspPI GGNCC 3 cut(s) 132, 133, 1057
PspXI VCTCGAGB 1 cut(s) 1116
PstI CTGCAG 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 1065
RsaI GTAC 3 cut(s) 926, 1215, 1260
RsaNI GTAC 3 cut(s) 925, 1214, 1259
RseI CAYNNNNRTG 2 cut(s) 966, 1083
SacI GAGCTC 1 cut(s) 1290
SapI GCTCTTC 1 cut(s) 755
SaqAI TTAA 4 cut(s) 18, 417, 630, 785
SatI GCNGC 7 cut(s) 156, 165, 168, 219, 222, 1066, 1089
Sau3AI GATC 2 cut(s) 493, 832
Sau96I GGNCC 3 cut(s) 132, 133, 1057
SchI GAGTC 3 cut(s) 391, 509, 806
ScrFI CCNGG 1 cut(s) 433
SduI GDGCHC 3 cut(s) 136, 1146, 1290
SfaNI GCATC 5 cut(s) 12, 43, 65, 538, 821
SfcI CTRYAG 1 cut(s) 939
Sfr274I CTCGAG 2 cut(s) 497, 1116
SfuI TTCGAA 1 cut(s) 92
SlaI CTCGAG 2 cut(s) 497, 1116
SmiMI CAYNNNNRTG 2 cut(s) 966, 1083
SmlI CTYRAG 3 cut(s) 497, 1116, 1165
SmoI CTYRAG 3 cut(s) 497, 1116, 1165
SphI GCATGC 2 cut(s) 887, 965
Sse9I AATT 3 cut(s) 88, 747, 768
SsiI CCGC 9 cut(s) 130, 165, 236, 275, 294, 300, 323, 359, 406
SspMI CTAG 2 cut(s) 611, 1127
SstI GAGCTC 1 cut(s) 1290
StyD4I CCNGG 1 cut(s) 431
StyI CCWWGG 1 cut(s) 735
TaaI ACNGT 4 cut(s) 7, 558, 984, 1159
TaiI ACGT 4 cut(s) 322, 699, 873, 926
TaqI TCGA 5 cut(s) 92, 498, 641, 1117, 1271
TasI AATT 3 cut(s) 88, 747, 768
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 1 cut(s) 1268
Tru1I TTAA 4 cut(s) 18, 417, 630, 785
Tru9I TTAA 4 cut(s) 18, 417, 630, 785
TscAI CASTG 4 cut(s) 105, 319, 715, 1146
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 6 cut(s) 155, 167, 218, 221, 1065, 1088
Tsp45I GTSAC 1 cut(s) 258
TspDTI ATGAA 5 cut(s) 690, 829, 1122, 1238, 1266
TspGWI ACGGA 2 cut(s) 77, 1199
TspRI CASTG 4 cut(s) 105, 319, 715, 1146
XapI RAATTY 1 cut(s) 88
XceI RCATGY 2 cut(s) 887, 965
XhoI CTCGAG 2 cut(s) 497, 1116
XmiI GTMKAC 1 cut(s) 1002
XspI CTAG 2 cut(s) 611, 1127
Zsp2I ATGCAT 3 cut(s) 58, 1107, 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.