Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16830 |
| malus_domestica | MD09G1165000.v1.1 MD17G1163000.v1.1 MD17G1163100.v1.1 MD17G1163200.v1.1 |
| prunus_persica | Prupe.3G022400_v2.0.a1 Prupe.3G022400_v2.0.a1 Prupe.3G022400_v2.0.a1 |
| pyrus_communis | pycom09g08220 pycom09g08230 pycom17g15580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AdeI | CACNNNGTG | 1 cut(s) | 485 |
| AfaI | GTAC | 1 cut(s) | 251 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 31 |
| AgsI | TTSAA | 1 cut(s) | 304 |
| AluBI | AGCT | 1 cut(s) | 57 |
| AluI | AGCT | 1 cut(s) | 57 |
| Alw26I | GTCTC | 4 cut(s) | 29, 175, 215, 468 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 164 |
| AspLEI | GCGC | 1 cut(s) | 91 |
| AsuHPI | GGTGA | 1 cut(s) | 14 |
| BccI | CCATC | 2 cut(s) | 6, 208 |
| BcoDI | GTCTC | 4 cut(s) | 29, 175, 215, 468 |
| BfaI | CTAG | 2 cut(s) | 237, 494 |
| BmiI | GGNNCC | 2 cut(s) | 373, 446 |
| BmsI | GCATC | 2 cut(s) | 100, 393 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BseYI | CCCAGC | 1 cut(s) | 388 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BsmAI | GTCTC | 4 cut(s) | 29, 175, 215, 468 |
| Bsp143I | GATC | 1 cut(s) | 430 |
| BspLI | GGNNCC | 2 cut(s) | 373, 446 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssMI | GATC | 1 cut(s) | 430 |
| Bst4CI | ACNGT | 2 cut(s) | 142, 462 |
| Bst6I | CTCTTC | 1 cut(s) | 471 |
| BstC8I | GCNNGC | 1 cut(s) | 427 |
| BstDEI | CTNAG | 1 cut(s) | 327 |
| BstHHI | GCGC | 1 cut(s) | 91 |
| BstKTI | GATC | 1 cut(s) | 433 |
| BstMAI | GTCTC | 4 cut(s) | 29, 175, 215, 468 |
| BstMBI | GATC | 1 cut(s) | 430 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 63 |
| BstNSI | RCATGY | 1 cut(s) | 429 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 388 |
| BtgZI | GCGATG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 427 |
| CfoI | GCGC | 1 cut(s) | 91 |
| Csp6I | GTAC | 1 cut(s) | 250 |
| CviAII | CATG | 1 cut(s) | 426 |
| CviJI | RGCY | 4 cut(s) | 57, 194, 372, 445 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 194, 372, 445 |
| CviQI | GTAC | 1 cut(s) | 250 |
| DdeI | CTNAG | 1 cut(s) | 327 |
| DpnI | GATC | 1 cut(s) | 432 |
| DpnII | GATC | 1 cut(s) | 430 |
| DraI | TTTAAA | 1 cut(s) | 276 |
| DraIII | CACNNNGTG | 1 cut(s) | 485 |
| Eam1104I | CTCTTC | 1 cut(s) | 471 |
| EarI | CTCTTC | 1 cut(s) | 471 |
| Eco32I | GATATC | 1 cut(s) | 20 |
| EcoRV | GATATC | 1 cut(s) | 20 |
| FaeI | CATG | 1 cut(s) | 429 |
| FaiI | YATR | 8 cut(s) | 64, 152, 287, 320, 336, 427, 508, 538 |
| FatI | CATG | 1 cut(s) | 425 |
| FspBI | CTAG | 2 cut(s) | 237, 494 |
| GlaI | GCGC | 1 cut(s) | 90 |
| GsaI | CCCAGC | 1 cut(s) | 392 |
| HhaI | GCGC | 1 cut(s) | 91 |
| Hin1II | CATG | 1 cut(s) | 429 |
| Hin6I | GCGC | 1 cut(s) | 89 |
| HinP1I | GCGC | 1 cut(s) | 89 |
| HinfI | GANTC | 2 cut(s) | 323, 451 |
| HphI | GGTGA | 1 cut(s) | 14 |
| Hpy166II | GTNNAC | 2 cut(s) | 252, 529 |
| Hpy188III | TCNNGA | 1 cut(s) | 448 |
| Hpy8I | GTNNAC | 2 cut(s) | 252, 529 |
| HpyCH4III | ACNGT | 2 cut(s) | 142, 462 |
| HpyCH4IV | ACGT | 1 cut(s) | 248 |
| HpyCH4V | TGCA | 2 cut(s) | 66, 178 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 63 |
| HpyF3I | CTNAG | 1 cut(s) | 327 |
| HpySE526I | ACGT | 1 cut(s) | 248 |
| Hsp92II | CATG | 1 cut(s) | 429 |
| HspAI | GCGC | 1 cut(s) | 89 |
| Kzo9I | GATC | 1 cut(s) | 430 |
| LmnI | GCTCC | 2 cut(s) | 377, 450 |
| LpnPI | CCDG | 6 cut(s) | 180, 210, 250, 354, 374, 461 |
| LweI | GCATC | 2 cut(s) | 100, 393 |
| MaeI | CTAG | 2 cut(s) | 237, 494 |
| MaeII | ACGT | 1 cut(s) | 248 |
| MaeIII | GTNAC | 3 cut(s) | 136, 244, 509 |
| MalI | GATC | 1 cut(s) | 432 |
| MboI | GATC | 1 cut(s) | 430 |
| MboII | GAAGA | 3 cut(s) | 222, 223, 458 |
| MluCI | AATT | 1 cut(s) | 383 |
| MnlI | CCTC | 4 cut(s) | 79, 356, 386, 491 |
| MroXI | GAANNNNTTC | 1 cut(s) | 164 |
| MseI | TTAA | 2 cut(s) | 275, 365 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 63 |
| NdeII | GATC | 1 cut(s) | 430 |
| NlaIII | CATG | 1 cut(s) | 429 |
| NlaIV | GGNNCC | 2 cut(s) | 373, 446 |
| NspI | RCATGY | 1 cut(s) | 429 |
| PaeI | GCATGC | 1 cut(s) | 429 |
| PdmI | GAANNNNTTC | 1 cut(s) | 164 |
| PfeI | GAWTC | 2 cut(s) | 323, 451 |
| PspFI | CCCAGC | 1 cut(s) | 388 |
| PspN4I | GGNNCC | 2 cut(s) | 373, 446 |
| RsaI | GTAC | 1 cut(s) | 251 |
| RsaNI | GTAC | 1 cut(s) | 250 |
| SaqAI | TTAA | 2 cut(s) | 275, 365 |
| Sau3AI | GATC | 1 cut(s) | 430 |
| SetI | ASST | 6 cut(s) | 59, 251, 348, 397, 484, 502 |
| SfaNI | GCATC | 2 cut(s) | 100, 393 |
| SphI | GCATGC | 1 cut(s) | 429 |
| Sse9I | AATT | 1 cut(s) | 383 |
| SspI | AATATT | 2 cut(s) | 307, 316 |
| SspMI | CTAG | 2 cut(s) | 237, 494 |
| TaaI | ACNGT | 2 cut(s) | 142, 462 |
| TaiI | ACGT | 1 cut(s) | 251 |
| TasI | AATT | 1 cut(s) | 383 |
| TfiI | GAWTC | 2 cut(s) | 323, 451 |
| Tru1I | TTAA | 2 cut(s) | 275, 365 |
| Tru9I | TTAA | 2 cut(s) | 275, 365 |
| TspDTI | ATGAA | 2 cut(s) | 173, 458 |
| TspGWI | ACGGA | 1 cut(s) | 450 |
| XceI | RCATGY | 1 cut(s) | 429 |
| XmnI | GAANNNNTTC | 1 cut(s) | 164 |
| XspI | CTAG | 2 cut(s) | 237, 494 |