Belongs to the TrpA family
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom17g24820 |
| rosa_chinensis | RchiOBHm_Chr1g0378511 RchiOBHm_Chr4g0436471 |
| rosa_multiflora | Rmu_sc0000579.1_g000008 Rmu_sc0007627.1_g000012 Rmu_sc0007627.1_g000013 Rmu_sc0008712.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00021740 |
| rosa_samantha | Rh1AG026300 Rh1AG430600 Rh1BG388500 Rh1DG047400 Rh1DG419600 Rh3BG116100 Rh4DG351000 Rh6AG316700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 120 |
| AcuI | CTGAAG | 1 cut(s) | 90 |
| AfaI | GTAC | 2 cut(s) | 153, 177 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 189, 190, 344, 345 |
| AgeI | ACCGGT | 1 cut(s) | 146 |
| AgsI | TTSAA | 4 cut(s) | 101, 259, 352, 362 |
| AluBI | AGCT | 4 cut(s) | 26, 104, 132, 281 |
| AluI | AGCT | 4 cut(s) | 26, 104, 132, 281 |
| Alw21I | GWGCWC | 1 cut(s) | 134 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 27 |
| AsiGI | ACCGGT | 1 cut(s) | 146 |
| AsuHPI | GGTGA | 2 cut(s) | 175, 335 |
| BanII | GRGCYC | 2 cut(s) | 134, 240 |
| Bbv12I | GWGCWC | 1 cut(s) | 134 |
| BccI | CCATC | 1 cut(s) | 278 |
| BsaAI | YACGTR | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 2 cut(s) | 135, 339 |
| BsaWI | WCCGGW | 1 cut(s) | 146 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 189, 190, 344, 345 |
| Bse118I | RCCGGY | 1 cut(s) | 146 |
| BseDI | CCNNGG | 2 cut(s) | 135, 339 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 189, 190, 344, 345 |
| BshTI | ACCGGT | 1 cut(s) | 146 |
| BsiHKAI | GWGCWC | 1 cut(s) | 134 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 189, 190, 344, 345 |
| Bsp1286I | GDGCHC | 2 cut(s) | 134, 240 |
| Bsp143I | GATC | 1 cut(s) | 79 |
| BsrFI | RCCGGY | 1 cut(s) | 146 |
| BssAI | RCCGGY | 1 cut(s) | 146 |
| BssECI | CCNNGG | 2 cut(s) | 135, 339 |
| BssMI | GATC | 1 cut(s) | 79 |
| BssNAI | GTATAC | 1 cut(s) | 121 |
| BssT1I | CCWWGG | 1 cut(s) | 339 |
| Bst1107I | GTATAC | 1 cut(s) | 121 |
| BstBAI | YACGTR | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 215 |
| BstDSI | CCRYGG | 1 cut(s) | 135 |
| BstKTI | GATC | 1 cut(s) | 82 |
| BstMBI | GATC | 1 cut(s) | 79 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 244 |
| BstZ17I | GTATAC | 1 cut(s) | 121 |
| BtgI | CCRYGG | 1 cut(s) | 135 |
| Cac8I | GCNNGC | 1 cut(s) | 215 |
| Cfr10I | RCCGGY | 1 cut(s) | 146 |
| Csp6I | GTAC | 2 cut(s) | 152, 176 |
| CspAI | ACCGGT | 1 cut(s) | 146 |
| CviQI | GTAC | 2 cut(s) | 152, 176 |
| DpnI | GATC | 1 cut(s) | 81 |
| DpnII | GATC | 1 cut(s) | 79 |
| DraI | TTTAAA | 1 cut(s) | 382 |
| Ecl136II | GAGCTC | 1 cut(s) | 132 |
| Eco130I | CCWWGG | 1 cut(s) | 339 |
| Eco24I | GRGCYC | 2 cut(s) | 134, 240 |
| Eco53kI | GAGCTC | 1 cut(s) | 132 |
| Eco57I | CTGAAG | 1 cut(s) | 90 |
| EcoICRI | GAGCTC | 1 cut(s) | 132 |
| EcoT14I | CCWWGG | 1 cut(s) | 339 |
| EcoT38I | GRGCYC | 2 cut(s) | 134, 240 |
| ErhI | CCWWGG | 1 cut(s) | 339 |
| FaiI | YATR | 1 cut(s) | 121 |
| FblI | GTMKAC | 1 cut(s) | 120 |
| FriOI | GRGCYC | 2 cut(s) | 134, 240 |
| HapII | CCGG | 1 cut(s) | 147 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HinfI | GANTC | 2 cut(s) | 18, 158 |
| HpaII | CCGG | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 175, 335 |
| Hpy166II | GTNNAC | 2 cut(s) | 121, 152 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy8I | GTNNAC | 2 cut(s) | 121, 152 |
| HpyAV | CCTTC | 3 cut(s) | 104, 307, 338 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 1 cut(s) | 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 244 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Kzo9I | GATC | 1 cut(s) | 79 |
| LmnI | GCTCC | 2 cut(s) | 137, 278 |
| LpnPI | CCDG | 3 cut(s) | 160, 231, 261 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MaeIII | GTNAC | 1 cut(s) | 142 |
| MalI | GATC | 1 cut(s) | 81 |
| MboI | GATC | 1 cut(s) | 79 |
| MboII | GAAGA | 1 cut(s) | 271 |
| MhlI | GDGCHC | 2 cut(s) | 134, 240 |
| MluCI | AATT | 1 cut(s) | 195 |
| MmeI | TCCRAC | 1 cut(s) | 98 |
| MnlI | CCTC | 1 cut(s) | 196 |
| MseI | TTAA | 2 cut(s) | 188, 381 |
| MspI | CCGG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 244 |
| NdeII | GATC | 1 cut(s) | 79 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| PfeI | GAWTC | 2 cut(s) | 18, 158 |
| PinAI | ACCGGT | 1 cut(s) | 146 |
| Ppu21I | YACGTR | 1 cut(s) | 155 |
| Psp124BI | GAGCTC | 1 cut(s) | 134 |
| RsaI | GTAC | 2 cut(s) | 153, 177 |
| RsaNI | GTAC | 2 cut(s) | 152, 176 |
| SacI | GAGCTC | 1 cut(s) | 134 |
| SaqAI | TTAA | 2 cut(s) | 188, 381 |
| Sau3AI | GATC | 1 cut(s) | 79 |
| SduI | GDGCHC | 2 cut(s) | 134, 240 |
| SetI | ASST | 7 cut(s) | 28, 106, 126, 134, 157, 283, 318 |
| Sse9I | AATT | 1 cut(s) | 195 |
| SstI | GAGCTC | 1 cut(s) | 134 |
| StyI | CCWWGG | 1 cut(s) | 339 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TaqI | TCGA | 2 cut(s) | 21, 82 |
| TasI | AATT | 1 cut(s) | 195 |
| TfiI | GAWTC | 2 cut(s) | 18, 158 |
| Tru1I | TTAA | 2 cut(s) | 188, 381 |
| Tru9I | TTAA | 2 cut(s) | 188, 381 |
| TspDTI | ATGAA | 3 cut(s) | 101, 183, 358 |
| TspGWI | ACGGA | 1 cut(s) | 124 |
| XmiI | GTMKAC | 1 cut(s) | 120 |