Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0014105

Physical Location & Seq

Genomic Coordinates Reverse (-)

24997640 .. 24999463

Gene Structure 1824 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGCTCTCTTCAAAATCCCAAGAAGCTATCAGCTTCTATCTTCTCCGCACACCTACAACTGCCGCTACTGCTTACGCTTCTCCTCCGCCACCACCACCGCAGCCGCAACCAATTGGTACTCGCTCCCGCCAAATCCTCACAATGAAGACCCAAAGCTCTCAGCTATCTCCCACGCCATCAAAAACCACTCTCAGTCTCTCGACTACTCCTCCTCTCTCAGAAAGCTCCTCCCTTCCCTCACAGCCCGTGACGTTATCAATCTCATCAACCTCAACCCCCACTCTCTCTCCCCTCTCTCTCTCCTCTCCTTCTTCGACTGGCTCTCTTCTCACCCCACGTTTCGCCACACCGTCCAATCCTACTGCACCATGGCCCACTTCCTTTGCGCTCACCAAATGTACCCCCAAGCCCTCTCCCTCCTACGACTCGTCGTTTCTCGCAGGGGAAAGGATTCTGCATCTTCCGTCTTCGCTTCGATTCTCGAAACTAGAGGTACCCATCGGTCCAATTATGTGTTTGATGCTTTGATGAATGCGTATTTGGATTCCGGGTTTGTTTCCGATGCATTTCAGTGCTTTAGATTGCTTAGGAAGCATAATTTCCGAATCCCATTTCATGTTTGTGGCTGTTTGCTTGATAAAATGTTGAAGTTGAACTCGCCTGTGGTGGCCTGGGAGTATTTTTTGGAGATTTTGGACGCTGGGTTTCCACCGAAAGTGTACGCTTTCAATGTTTTGATGCACAAAATGTGTAAGGAAGGAAAAATTGAACAGGCCCAGATGGTGTTTGATGAAATTGGGAAGCGGGGTTTGCGCCCGAGTGTGGTTAGTTTCAATACTCTGATTAATGGGTATTGCAAATCCGGGAATCTGGAGGAGGGTTTTAGGTTGAAGAGAGGTATGGAGGAGAGCAGAACGTGGCCTGATGTATATACTTACAGTGTTTTGATCAATGGGTTGTGTAAGGAGTGTAGGCTGCATGACGCAAACTTGTTGTTTGATGAAATGTGTGAGAGGGGGTTGGTTCCGAATTTTGTCACATTTACGACTTTGATTGACGGGCAGTGTAAGAATGGCAGGATTGATTTGGCAATGGAAATTTATCAGAAAATGTTGGGGAGAGGTATCAAACCAGATGTGATTTCGTATAATACACTCATAAATGGCCTTTGCAAGGTTGGTGATTTGAAGGAAGCTAGGAAGCTTGTTGAGGAGATGAATATGACTGGGGTGAAGCCTGACACGATCACTTATACTACACTTATTGATGGATGCTGCAAAGAAGGAGATTTACATTCGGCGCTAGAGATAAGGCAGGGAATGATTATACAAGGGATTAAGCTTGACAATGTAGCTTTCACAGCCCTTATTTCGGGATTGTGTAGAGAGGGAAGAACCCTTGACGCTGAAAAAATGTTGAGGGAGATGTTAGATTGTGGCATGAAACCTGATGATGCCACGTATACAATGGTCATTGATGGGTTTTGCAAGAAGGGCAATGTTAAAATGGGTTTTAAGTTGCTCAAGGAGATGCAGAGTGATGACTATGTGCCAAGTGTTGTAACCTATAACGCTCTTATGAATGGACTATGCAAGCTAGGACAGATGAAAAATGCTGGTATGCTCTTACATGCTATGATTAATTTGGGGGTGGCTCCAGATGACATTACATACAACATTCTATTGGAAGGGCATTGCAAGCATGGAAACGCAGGGGACTTTGAAAAGCTACGGAGTGAGAAAGGGCTTGCTCTTGATTATGCTTCATATACTTCGCTAGTTAGCGAATTCAGTAAGTTTTCAAAGGATCGTCGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

608

Amino Acids

68.45

Weight (kDa)

8.64

Isoelectric Point (pI)

34.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	153 - 265	1.7e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	233 - 285	8.7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	238 - 278	1.2e-08	PPR repeat family
TPR_24	PF23276	248 - 371	3e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	262 - 318	8.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	269 - 302	2.5e-11	PPR repeat
PPR_2	PF13041	273 - 322	1.1e-17	PPR repeat family
PPR	PF01535	276 - 304	1.1e-06	PPR repeat
PPR_1	PF12854	308 - 336	1.3e-09	PPR repeat
PPR	PF01535	311 - 341	1.7e-06	PPR repeat
PPR_2	PF13041	316 - 357	5.9e-12	PPR repeat family
PPR_long	PF17177	326 - 421	1e-05	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	332 - 388	3.9e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	339 - 371	4.1e-11	PPR repeat
PPR_2	PF13041	343 - 392	2.8e-18	PPR repeat family
PPR	PF01535	346 - 376	1.2e-07	PPR repeat
PPR_1	PF12854	374 - 406	2.9e-15	PPR repeat
PPR_2	PF13041	378 - 427	6.4e-21	PPR repeat family
PPR	PF01535	381 - 407	1e-07	PPR repeat
PPR_3	PF13812	401 - 441	9.6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	410 - 441	1.5e-11	PPR repeat
PPR_2	PF13041	415 - 462	1.6e-11	PPR repeat family
PPR	PF01535	416 - 445	2.6e-06	PPR repeat
PPR_long	PF17177	419 - 572	1.6e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	445 - 476	6.8e-10	PPR repeat
PPR_2	PF13041	449 - 497	4.8e-15	PPR repeat family
PPR	PF01535	451 - 480	6.8e-07	PPR repeat
PPR_3	PF13812	472 - 528	2.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	480 - 512	2.8e-10	PPR repeat
PPR	PF01535	487 - 514	6e-07	PPR repeat
PPR_2	PF13041	487 - 532	6.2e-14	PPR repeat family
PPR_1	PF12854	516 - 546	3.2e-07	PPR repeat
PPR_2	PF13041	518 - 567	3e-17	PPR repeat family
PPR	PF01535	521 - 551	5.2e-06	PPR repeat
PPR_1	PF12854	550 - 570	8.4e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09680
fragaria_vesca	FvH4_1g30171
malus_domestica	MD17G1268500.v1.1
prunus_persica	Prupe.3G166000_v2.0.a1
pyrus_communis	pycom17g26700
rosa_chinensis	RchiOBHm_Chr3g0491601
rosa_laevigata	RLG00000022834
rosa_roxburghii	Rroxscaffold_6G00392790
rosa_rugosa	Rorug03G0250400 Rorug03G0250500 Rorug03G0250600 Rorug03G0250600 Rorug03G0250600
rosa_samantha	Rh3AG299400 Rh3CG332200 Rh3DG333900
rosa_wichuraiana	Rw3G026450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	494
AccB1I	GGYRCC	1 cut(s)	494
AccI	GTMKAC	1 cut(s)	1463
AciI	CCGC	7 cut(s)	47, 64, 87, 99, 105, 128, 805
AclWI	GGATC	1 cut(s)	1815
AcsI	RAATTY	3 cut(s)	1030, 1098, 1787
AfaI	GTAC	4 cut(s)	119, 401, 496, 722
AfiI	CCNNNNNNNGG	3 cut(s)	823, 1174, 1372
AjnI	CCWGG	1 cut(s)	671
AjuI	GAANNNNNNNTTGG	2 cut(s)	524, 556
Alw26I	GTCTC	1 cut(s)	201
AlwI	GGATC	1 cut(s)	1815
Ama87I	CYCGRG	1 cut(s)	817
AoxI	GGCC	5 cut(s)	372, 669, 774, 920, 1165
ApeKI	GCWGC	3 cut(s)	101, 976, 1275
ApoI	RAATTY	3 cut(s)	1030, 1098, 1787
AseI	ATTAAT	2 cut(s)	846, 1641
Asp700I	GAANNNNTTC	1 cut(s)	451
Asp718I	GGTACC	1 cut(s)	494
AspLEI	GCGC	3 cut(s)	389, 816, 1303
AspS9I	GGNCC	3 cut(s)	373, 504, 775
AsuC2I	CCSGG	2 cut(s)	550, 865
AsuHPI	GGTGA	4 cut(s)	323, 383, 1193, 1243
AvaI	CYCGRG	1 cut(s)	817
AvaII	GGWCC	1 cut(s)	504
BanI	GGYRCC	1 cut(s)	494
BarI	GAAGNNNNNNTAC	2 cut(s)	1275, 1307
BbsI	GAAGAC	2 cut(s)	153, 460
BbvI	GCAGC	3 cut(s)	113, 963, 1262
BccI	CCATC	5 cut(s)	185, 507, 775, 1262, 1472
BciT130I	CCWGG	1 cut(s)	673
BclI	TGATCA	1 cut(s)	948
BcnI	CCSGG	2 cut(s)	550, 865
BcoDI	GTCTC	1 cut(s)	201
BfaI	CTAG	5 cut(s)	489, 1197, 1304, 1598, 1778
BfoI	RGCGCY	1 cut(s)	1304
BisI	GCNGC	5 cut(s)	64, 102, 105, 977, 1276
BlsI	GCNGC	5 cut(s)	65, 103, 106, 978, 1277
Bme1390I	CCNGG	3 cut(s)	550, 673, 865
Bme18I	GGWCC	1 cut(s)	504
BmeT110I	CYCGRG	1 cut(s)	817
BmgT120I	GGNCC	3 cut(s)	373, 504, 775
BmiI	GGNNCC	3 cut(s)	496, 1026, 1656
BmrFI	CCNGG	3 cut(s)	550, 673, 865
BmrI	ACTGGG	1 cut(s)	1236
BmsI	GCATC	7 cut(s)	467, 511, 553, 729, 1262, 1444, 1521
BmuI	ACTGGG	1 cut(s)	1236
BpiI	GAAGAC	2 cut(s)	153, 460
BpmI	CTGGAG	2 cut(s)	893, 1641
Bpu10I	CCTNAGC	1 cut(s)	587
BpuEI	CTTGAG	1 cut(s)	1508
BpuMI	CCSGG	2 cut(s)	550, 865
BsaAI	YACGTR	1 cut(s)	1461
BsaJI	CCNNGG	2 cut(s)	369, 672
BsaXI	ACNNNNNCTCC	4 cut(s)	194, 224, 272, 302
Bsc4I	CCNNNNNNNGG	3 cut(s)	823, 1174, 1372
Bse1I	ACTGG	2 cut(s)	323, 1231
Bse3DI	GCAATG	3 cut(s)	1098, 1504, 1693
BseBI	CCWGG	1 cut(s)	673
BseDI	CCNNGG	2 cut(s)	369, 672
BseGI	GGATG	1 cut(s)	1277
BseLI	CCNNNNNNNGG	3 cut(s)	823, 1174, 1372
BseMI	GCAATG	3 cut(s)	1098, 1504, 1693
BseMII	CTCAG	3 cut(s)	174, 206, 232
BseNI	ACTGG	2 cut(s)	323, 1231
BseRI	GAGGAG	8 cut(s)	73, 199, 202, 218, 293, 890, 920, 1226
BseXI	GCAGC	3 cut(s)	113, 963, 1262
BseYI	CCCAGC	1 cut(s)	701
BsgI	GTGCAG	1 cut(s)	349
BshFI	GGCC	5 cut(s)	374, 671, 776, 922, 1167
BshNI	GGYRCC	1 cut(s)	494
BsiHKCI	CYCGRG	1 cut(s)	817
BsiSI	CCGG	2 cut(s)	549, 864
BslFI	GGGAC	1 cut(s)	1730
BslI	CCNNNNNNNGG	3 cut(s)	823, 1174, 1372
BsmAI	GTCTC	1 cut(s)	201
BsmFI	GGGAC	1 cut(s)	1730
BsmI	GAATGC	1 cut(s)	538
BsnI	GGCC	5 cut(s)	374, 671, 776, 922, 1167
BsoBI	CYCGRG	1 cut(s)	817
Bsp143I	GATC	3 cut(s)	948, 1245, 1807
Bsp19I	CCATGG	1 cut(s)	369
BspACI	CCGC	7 cut(s)	47, 64, 87, 99, 105, 128, 805
BspANI	GGCC	5 cut(s)	374, 671, 776, 922, 1167
BspCNI	CTCAG	3 cut(s)	173, 205, 231
BspLI	GGNNCC	3 cut(s)	496, 1026, 1656
BspPI	GGATC	1 cut(s)	1815
BspT107I	GGYRCC	1 cut(s)	494
BsrDI	GCAATG	3 cut(s)	1098, 1504, 1693
BsrI	ACTGG	2 cut(s)	323, 1231
BssECI	CCNNGG	2 cut(s)	369, 672
BssMI	GATC	3 cut(s)	948, 1245, 1807
BssNAI	GTATAC	1 cut(s)	1464
BssT1I	CCWWGG	1 cut(s)	369
Bst1107I	GTATAC	1 cut(s)	1464
Bst2UI	CCWGG	1 cut(s)	673
Bst4CI	ACNGT	2 cut(s)	352, 941
Bst6I	CTCTTC	3 cut(s)	14, 331, 887
BstBAI	YACGTR	1 cut(s)	1461
BstC8I	GCNNGC	3 cut(s)	1595, 1700, 1749
BstDEI	CTNAG	4 cut(s)	160, 192, 218, 587
BstDSI	CCRYGG	1 cut(s)	369
BstENI	CCTNNNNNAGG	1 cut(s)	1172
BstF5I	GGATG	1 cut(s)	1277
BstH2I	RGCGCY	1 cut(s)	1304
BstHHI	GCGC	3 cut(s)	389, 816, 1303
BstKTI	GATC	3 cut(s)	951, 1248, 1810
BstMAI	GTCTC	1 cut(s)	201
BstMBI	GATC	3 cut(s)	948, 1245, 1807
BstMWI	GCNNNNNNNGC	6 cut(s)	69, 592, 811, 1361, 1494, 1699
BstNI	CCWGG	1 cut(s)	673
BstNSI	RCATGY	1 cut(s)	1634
BstSCI	CCNGG	3 cut(s)	548, 671, 863
BstV1I	GCAGC	3 cut(s)	113, 963, 1262
BstV2I	GAAGAC	2 cut(s)	153, 460
BstZ17I	GTATAC	1 cut(s)	1464
BsuRI	GGCC	5 cut(s)	374, 671, 776, 922, 1167
BtgI	CCRYGG	1 cut(s)	369
BtsCI	GGATG	1 cut(s)	1277
BtsI	GCAGTG	1 cut(s)	1070
BtsIMutI	CAGTG	3 cut(s)	578, 946, 1070
Cac8I	GCNNGC	3 cut(s)	1595, 1700, 1749
CfoI	GCGC	3 cut(s)	389, 816, 1303
Cfr13I	GGNCC	3 cut(s)	373, 504, 775
CseI	GACGC	3 cut(s)	707, 992, 1412
Csp6I	GTAC	4 cut(s)	118, 400, 495, 721
CspCI	CAANNNNNGTGG	2 cut(s)	365, 400
CviAII	CATG	6 cut(s)	370, 617, 980, 1441, 1631, 1703
CviQI	GTAC	4 cut(s)	118, 400, 495, 721
DdeI	CTNAG	4 cut(s)	160, 192, 218, 587
DpnI	GATC	3 cut(s)	950, 1247, 1809
DpnII	GATC	3 cut(s)	948, 1245, 1807
Eam1104I	CTCTTC	3 cut(s)	14, 331, 887
EarI	CTCTTC	3 cut(s)	14, 331, 887
EciI	GGCGGA	1 cut(s)	76
Eco130I	CCWWGG	1 cut(s)	369
Eco47I	GGWCC	1 cut(s)	504
Eco88I	CYCGRG	1 cut(s)	817
EcoNI	CCTNNNNNAGG	1 cut(s)	1172
EcoRI	GAATTC	1 cut(s)	1787
EcoRII	CCWGG	1 cut(s)	671
EcoT14I	CCWWGG	1 cut(s)	369
EcoT22I	ATGCAT	1 cut(s)	568
ErhI	CCWWGG	1 cut(s)	369
FaeI	CATG	6 cut(s)	373, 620, 983, 1444, 1634, 1706
FaqI	GGGAC	1 cut(s)	1730
FatI	CATG	6 cut(s)	369, 616, 979, 1440, 1630, 1702
FauI	CCCGC	2 cut(s)	135, 798
FbaI	TGATCA	1 cut(s)	948
FblI	GTMKAC	1 cut(s)	1463
Fnu4HI	GCNGC	5 cut(s)	64, 102, 105, 977, 1276
FokI	GGATG	1 cut(s)	1284
Fsp4HI	GCNGC	5 cut(s)	64, 102, 105, 977, 1276
FspBI	CTAG	5 cut(s)	489, 1197, 1304, 1598, 1778
GlaI	GCGC	3 cut(s)	388, 815, 1302
GluI	GCNGC	5 cut(s)	64, 102, 105, 977, 1276
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	2 cut(s)	893, 1641
HaeII	RGCGCY	1 cut(s)	1304
HaeIII	GGCC	5 cut(s)	374, 671, 776, 922, 1167
HapII	CCGG	2 cut(s)	549, 864
HgaI	GACGC	3 cut(s)	707, 992, 1412
HhaI	GCGC	3 cut(s)	389, 816, 1303
Hin1II	CATG	6 cut(s)	373, 620, 983, 1444, 1634, 1706
Hin6I	GCGC	3 cut(s)	387, 814, 1301
HinP1I	GCGC	3 cut(s)	387, 814, 1301
HindIII	AAGCTT	2 cut(s)	1202, 1340
HinfI	GANTC	6 cut(s)	426, 452, 478, 545, 606, 868
HpaII	CCGG	2 cut(s)	549, 864
HphI	GGTGA	4 cut(s)	323, 383, 1193, 1243
Hpy166II	GTNNAC	2 cut(s)	721, 1464
Hpy188I	TCNGA	6 cut(s)	221, 562, 605, 843, 1029, 1107
Hpy188III	TCNNGA	6 cut(s)	200, 482, 872, 1374, 1658, 1754
Hpy8I	GTNNAC	2 cut(s)	721, 1464
Hpy99I	CGWCG	2 cut(s)	434, 1815
HpyAV	CCTTC	7 cut(s)	243, 319, 752, 1183, 1277, 1486, 1682
HpyCH4III	ACNGT	2 cut(s)	352, 941
HpyCH4IV	ACGT	4 cut(s)	252, 338, 917, 1460
HpyF10VI	GCNNNNNNNGC	6 cut(s)	69, 592, 811, 1361, 1494, 1699
HpyF3I	CTNAG	4 cut(s)	160, 192, 218, 587
HpySE526I	ACGT	4 cut(s)	252, 338, 917, 1460
Hsp92II	CATG	6 cut(s)	373, 620, 983, 1444, 1634, 1706
HspAI	GCGC	3 cut(s)	387, 814, 1301
KpnI	GGTACC	1 cut(s)	498
Ksp22I	TGATCA	1 cut(s)	948
Kzo9I	GATC	3 cut(s)	948, 1245, 1807
LmnI	GCTCC	3 cut(s)	129, 231, 1660
Lsp1109I	GCAGC	3 cut(s)	113, 963, 1262
LweI	GCATC	7 cut(s)	467, 511, 553, 729, 1262, 1444, 1521
MaeI	CTAG	5 cut(s)	489, 1197, 1304, 1598, 1778
MaeII	ACGT	4 cut(s)	252, 338, 917, 1460
MaeIII	GTNAC	3 cut(s)	248, 1036, 1561
MalI	GATC	3 cut(s)	950, 1247, 1809
MboI	GATC	3 cut(s)	948, 1245, 1807
MboII	GAAGA	8 cut(s)	33, 158, 304, 318, 453, 460, 904, 1404
MfeI	CAATTG	1 cut(s)	112
MluCI	AATT	9 cut(s)	112, 508, 598, 765, 795, 1030, 1098, 1642, 1787
MlyI	GAGTC	1 cut(s)	420
Mph1103I	ATGCAT	1 cut(s)	568
MroXI	GAANNNNTTC	1 cut(s)	451
MseI	TTAA	5 cut(s)	846, 1338, 1503, 1515, 1641
MslI	CAYNNNNRTG	2 cut(s)	571, 621
MspI	CCGG	2 cut(s)	549, 864
MspR9I	CCNGG	3 cut(s)	550, 673, 865
MunI	CAATTG	1 cut(s)	112
Mva1269I	GAATGC	1 cut(s)	538
MvaI	CCWGG	1 cut(s)	673
MwoI	GCNNNNNNNGC	6 cut(s)	69, 592, 811, 1361, 1494, 1699
NciI	CCSGG	2 cut(s)	550, 865
NcoI	CCATGG	1 cut(s)	369
NdeII	GATC	3 cut(s)	948, 1245, 1807
NlaIII	CATG	6 cut(s)	373, 620, 983, 1444, 1634, 1706
NlaIV	GGNNCC	3 cut(s)	496, 1026, 1656
NmuCI	GTSAC	2 cut(s)	248, 1036
NsiI	ATGCAT	1 cut(s)	568
NspI	RCATGY	1 cut(s)	1634
PctI	GAATGC	1 cut(s)	538
PdmI	GAANNNNTTC	1 cut(s)	451
PfeI	GAWTC	5 cut(s)	452, 478, 545, 606, 868
PfoI	TCCNGGA	1 cut(s)	863
PkrI	GCNGC	5 cut(s)	65, 103, 106, 978, 1277
PleI	GAGTC	1 cut(s)	420
PpsI	GAGTC	1 cut(s)	420
Ppu21I	YACGTR	1 cut(s)	1461
PshBI	ATTAAT	2 cut(s)	846, 1641
Psp6I	CCWGG	1 cut(s)	671
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	1 cut(s)	671
PspN4I	GGNNCC	3 cut(s)	496, 1026, 1656
PspPI	GGNCC	3 cut(s)	373, 504, 775
RsaI	GTAC	4 cut(s)	119, 401, 496, 722
RsaNI	GTAC	4 cut(s)	118, 400, 495, 721
RseI	CAYNNNNRTG	2 cut(s)	571, 621
SaqAI	TTAA	5 cut(s)	846, 1338, 1503, 1515, 1641
SatI	GCNGC	5 cut(s)	64, 102, 105, 977, 1276
Sau3AI	GATC	3 cut(s)	948, 1245, 1807
Sau96I	GGNCC	3 cut(s)	373, 504, 775
SchI	GAGTC	1 cut(s)	420
ScrFI	CCNGG	3 cut(s)	550, 673, 865
SfaNI	GCATC	7 cut(s)	467, 511, 553, 729, 1262, 1444, 1521
SinI	GGWCC	1 cut(s)	504
SmiMI	CAYNNNNRTG	2 cut(s)	571, 621
SmlI	CTYRAG	1 cut(s)	1523
SmoI	CTYRAG	1 cut(s)	1523
Sse9I	AATT	9 cut(s)	112, 508, 598, 765, 795, 1030, 1098, 1642, 1787
SsiI	CCGC	7 cut(s)	47, 64, 87, 99, 105, 128, 805
SspMI	CTAG	5 cut(s)	489, 1197, 1304, 1598, 1778
StyD4I	CCNGG	3 cut(s)	548, 671, 863
StyI	CCWWGG	1 cut(s)	369
TaaI	ACNGT	2 cut(s)	352, 941
TaiI	ACGT	4 cut(s)	255, 341, 920, 1463
TaqI	TCGA	5 cut(s)	201, 315, 476, 483, 1813
TaqII	GACCGA	1 cut(s)	492
TasI	AATT	9 cut(s)	112, 508, 598, 765, 795, 1030, 1098, 1642, 1787
TauI	GCSGC	2 cut(s)	66, 107
TfiI	GAWTC	5 cut(s)	452, 478, 545, 606, 868
Tru1I	TTAA	5 cut(s)	846, 1338, 1503, 1515, 1641
Tru9I	TTAA	5 cut(s)	846, 1338, 1503, 1515, 1641
TscAI	CASTG	3 cut(s)	578, 946, 1070
TseFI	GTSAC	2 cut(s)	248, 1036
TseI	GCWGC	3 cut(s)	101, 976, 1275
Tsp45I	GTSAC	2 cut(s)	248, 1036
TspGWI	ACGGA	2 cut(s)	454, 1747
TspRI	CASTG	3 cut(s)	578, 946, 1070
VpaK11BI	GGWCC	1 cut(s)	504
VspI	ATTAAT	2 cut(s)	846, 1641
XagI	CCTNNNNNAGG	1 cut(s)	1172
XapI	RAATTY	3 cut(s)	1030, 1098, 1787
XceI	RCATGY	1 cut(s)	1634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1465
XmiI	GTMKAC	1 cut(s)	1463
XmnI	GAANNNNTTC	1 cut(s)	451
XspI	CTAG	5 cut(s)	489, 1197, 1304, 1598, 1778
Zsp2I	ATGCAT	1 cut(s)	568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.