Rroxscaffold_6G00392790

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0014105
Physical Location & Seq
Reverse (-)
12516990 .. 12519485
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00392790.1

Sequence Viewer

Length: 1806 bp
ATGGCGCTCACCAAAATGGCAAGGAGCAATCAGTTTCTGCTTCCTCCCCACAATTACAAATTATGCTTCTCCACCATCCCTTGGTACAAGCCTCCTCCTCCTCCTCCTCCTCGCCGCCGTGAACATGACAAAGAGGAACCGTTACTCTCCCTCCTCTCCGACGCCATCACCACCAGCAACACAAACCCTCTCCCTCTCAGGAAGCTCCTCCCTTCCCTCACCGCCCGTGACGTCATCAACCTCATCAACCTCAACCCCGACTCCCTCCCTCCCCACTCTCTCCTCTCCTTCTTCCACTGGCTCTCTTCCCGCCCCACCTTTCGCCACACCCTCCAATCCTACCTCACCATGGCCCACTTCCTCTCCTCCCACCAAATGTTCCCCCAAGCCCTCTCCCTCGTACGACTCGTCGTTTCCCGCAAGGGCAAGGGCTCCGCCGCCTCCGTCTTCGCTTCCCTTCTCCAAACCAGAGGTACCCATCTCCACTCCGATTATGTCTTTCATGCTTTGATCAATGCCTACACGGATTCTGGGTTTCTGGGGGATGCCGTGCAGTGCTTTAGGTTGCTTAGGAAGCACGGTTTTCGGATACCCTTTCAGGCTTGTGGTCATTTGCTTGATAAAATGTTCATGTTCAACACCCCTGTTGTCACTTGGGGCTTTCTTTTGGAGATTTTGGATTCTGGGTTTCCACCCAATGTGTATAATTTCAATGTTTTGATGCATAAAATGTGCAAGCAAGGTCATATCAGAGAGGCCCAGGCGGTGTTCGATGAAATTGGGAACAGGGGTTTGAACCCAACTGTAATTAGTTTTAATACCTTGATTAATGGCTATTGTAAATCTGGCAATCTGGAGCCGGGTTTTAAGTTGAAGGCGGATATGGAGGGGAGAACAATGTGTCCTGATTTGTTTACTTACAGTGTTTTAATAAATGGGTTGTGTAAGGAAGGCAGGTTGGATGATGCAAATGGGTTGTTTGATGAAATGTGTGCGAGGGGTTTGGTTCCAAATGACGTCATTTTTACAACTTTGATTGATGGGCAGTGTAAGAATGGGAATCTTGATCTGGCGCTAGAAATGTATCAGGAAATGTTAGGGAGAGGTATCAAACCAGATATAGTTACATACAATACACTCATAAATGGCCTTTGCAAGGTTGGAGATATGAAAGAAGCTAGGAAGCTTGTTGAGGAGATGAATACGAGAGGTTTCAAGCCTGACAAGATCACTTACACTACACTAATTGATGGATGCTGCAAAGAAGGAGAGTTAGAATCAGCCATAGAGATAAGGAAAGAGATGATTAAAGAAGAGATTGCGCTGGACAATGTAGCTTTCACAGCTCTTATTTCAGGATTTGGCCGAGAGGGAAGAATCGTCGAGGCAGAAAAAATGTTGAGGGAGATGTTAAAGGCCGGCATGAAGCCTGATGATGCCACTTATACAATGCTCATTGATGGTTTTTGCAAAAGGGGTGATGTTAATATTGGTTTTAAGTTGCTCAAGGAAATGCAGGGTGATGGTCATGTACCAAGTGTTGTGACCTATAATGTGCTTATGAATGGATTATGCAAGCAAGGACAGATGAAAAATGCAAATATGCTGTTGAATGCTATGATTAACGTGGGGGTGGTGCCCGATGATATTACATACAACACTCTATTAGAAGGACATTGCAAGCATGGAAACCCGGATGACTTTGAGAAGCTATGGAGTGAGAAAGGACTTGTTCTTGATTATGCTTCGTATAATTCTCTAGTCAGTGAATTAAATAAATCTTTAAAAAAGCGTCCGAAGAGATGA

Protein Analysis

601

Amino Acids

67.54

Weight (kDa)

8.37

Isoelectric Point (pI)

29.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 225 - 279 2.4e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 229 - 259 1.5e-06 PPR repeat
PPR_2 PF13041 232 - 272 1.3e-07 PPR repeat family
PPR_1 PF12854 263 - 296 6.1e-10 PPR repeat
PPR_2 PF13041 267 - 316 3.1e-16 PPR repeat family
PPR_1 PF12854 300 - 330 1.6e-13 PPR repeat
PPR PF01535 305 - 335 1.7e-08 PPR repeat
PPR_2 PF13041 310 - 340 2.6e-07 PPR repeat family
PPR_long PF17177 320 - 416 3.2e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 326 - 382 1.5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 333 - 365 4.3e-10 PPR repeat
PPR_2 PF13041 337 - 386 5e-19 PPR repeat family
PPR PF01535 340 - 370 1.6e-07 PPR repeat
TPR_24 PF23276 351 - 451 8e-07 Fungal tetratrico peptide repeats
PPR_long PF17177 354 - 452 3e-09 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 368 - 400 8.2e-16 PPR repeat
PPR_2 PF13041 372 - 421 1.1e-22 PPR repeat family
PPR PF01535 375 - 405 1.8e-09 PPR repeat
PPR_3 PF13812 395 - 455 5.5e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 403 - 435 1.2e-12 PPR repeat
PPR_2 PF13041 410 - 455 2.3e-11 PPR repeat family
PPR PF01535 410 - 439 1.9e-08 PPR repeat
PPR_long PF17177 414 - 568 9.1e-13 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 441 - 470 3.8e-07 PPR repeat
PPR_2 PF13041 443 - 491 1.1e-15 PPR repeat family
PPR PF01535 445 - 474 5.6e-07 PPR repeat
PPR_3 PF13812 466 - 522 4.1e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 474 - 506 3.2e-11 PPR repeat
PPR PF01535 481 - 509 2.4e-06 PPR repeat
PPR_2 PF13041 485 - 526 7.1e-13 PPR repeat family
PPR_3 PF13812 500 - 557 3.4e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 508 - 540 3.4e-09 PPR repeat
PPR_2 PF13041 512 - 561 1.2e-17 PPR repeat family
PPR PF01535 515 - 545 6e-06 PPR repeat
PPR_1 PF12854 544 - 572 2e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09680
fragaria_vesca FvH4_1g30171
malus_domestica MD17G1268500.v1.1
prunus_persica Prupe.3G166000_v2.0.a1
pyrus_communis pycom17g26700
rosa_chinensis RchiOBHm_Chr3g0491601
rosa_laevigata RLG00000022834
rosa_roxburghii Rroxscaffold_6G00392790
rosa_rugosa Rorug03G0250400 Rorug03G0250500 Rorug03G0250600 Rorug03G0250600 Rorug03G0250600
rosa_samantha Rh3AG299400 Rh3CG332200 Rh3DG333900
rosa_wichuraiana Rw3G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 234, 1020
Acc36I ACCTGC 1 cut(s) 945
Acc65I GGTACC 1 cut(s) 473
AccB1I GGYRCC 2 cut(s) 473, 1636
AccB7I CCANNNNNTGG 1 cut(s) 81
AciI CCGC 8 cut(s) 115, 222, 310, 418, 435, 438, 764, 878
AcoI YGGCCR 1 cut(s) 1363
AcyI GRCGYC 3 cut(s) 162, 231, 1017
AfaI GTAC 4 cut(s) 86, 402, 475, 1533
AfiI CCNNNNNNNGG 3 cut(s) 81, 349, 1156
AgsI TTSAA 6 cut(s) 637, 712, 796, 874, 1216, 1612
AjnI CCWGG 1 cut(s) 759
AloI GAACNNNNNNTCC 2 cut(s) 886, 918
AluBI AGCT 6 cut(s) 205, 1178, 1186, 1337, 1346, 1711
AluI AGCT 6 cut(s) 205, 1178, 1186, 1337, 1346, 1711
AlwNI CAGNNNCTG 1 cut(s) 37
AoxI GGCC 5 cut(s) 351, 756, 1147, 1363, 1416
ApeKI GCWGC 1 cut(s) 1257
AseI ATTAAT 1 cut(s) 828
Asp718I GGTACC 1 cut(s) 473
AspLEI GCGC 3 cut(s) 7, 1075, 1324
AspS9I GGNCC 2 cut(s) 352, 757
AsuC2I CCSGG 2 cut(s) 861, 1694
AsuHPI GGTGA 5 cut(s) 160, 211, 337, 1490, 1532
BaeGI GKGCMC 1 cut(s) 1641
BanI GGYRCC 2 cut(s) 473, 1636
BanII GRGCYC 1 cut(s) 434
BbsI GAAGAC 1 cut(s) 439
BbvI GCAGC 1 cut(s) 1244
BccI CCATC 7 cut(s) 83, 173, 486, 1034, 1244, 1454, 1517
BceAI ACGGC 2 cut(s) 102, 533
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 1 cut(s) 761
BciVI GTATCC 1 cut(s) 582
BclI TGATCA 1 cut(s) 510
BcnI CCSGG 2 cut(s) 861, 1694
BfaI CTAG 3 cut(s) 1076, 1179, 1760
BfoI RGCGCY 2 cut(s) 8, 1076
BfuAI ACCTGC 1 cut(s) 945
BfuI GTATCC 1 cut(s) 582
BisI GCNGC 3 cut(s) 115, 438, 1258
BlsI GCNGC 3 cut(s) 116, 439, 1259
Bme1390I CCNGG 3 cut(s) 761, 861, 1694
BmgT120I GGNCC 2 cut(s) 352, 757
BmiI GGNNCC 6 cut(s) 138, 433, 475, 858, 1008, 1638
BmrFI CCNGG 3 cut(s) 761, 861, 1694
BmsI GCATC 5 cut(s) 535, 711, 955, 1244, 1426
BpiI GAAGAC 1 cut(s) 439
BpmI CTGGAG 1 cut(s) 875
Bpu10I CCTNAGC 1 cut(s) 569
BpuEI CTTGAG 1 cut(s) 1490
BpuMI CCSGG 2 cut(s) 861, 1694
BsaHI GRCGYC 3 cut(s) 162, 231, 1017
BsaJI CCNNGG 3 cut(s) 80, 348, 759
BsaXI ACNNNNNCTCC 6 cut(s) 135, 165, 245, 275, 347, 377
Bsc4I CCNNNNNNNGG 3 cut(s) 81, 349, 1156
Bse118I RCCGGY 1 cut(s) 1418
Bse1I ACTGG 1 cut(s) 302
Bse3DI GCAATG 1 cut(s) 1675
BseBI CCWGG 1 cut(s) 761
BseDI CCNNGG 3 cut(s) 80, 348, 759
BseGI GGATG 5 cut(s) 75, 550, 967, 1259, 1702
BseLI CCNNNNNNNGG 3 cut(s) 81, 349, 1156
BseMI GCAATG 1 cut(s) 1675
BseMII CTCAG 1 cut(s) 211
BseNI ACTGG 1 cut(s) 302
BseSI GKGCMC 1 cut(s) 1641
BseXI GCAGC 1 cut(s) 1244
BsgI GTGCAG 1 cut(s) 572
BshFI GGCC 5 cut(s) 353, 758, 1149, 1365, 1418
BshNI GGYRCC 2 cut(s) 473, 1636
BsiSI CCGG 3 cut(s) 860, 1419, 1694
BsiWI CGTACG 1 cut(s) 400
BslI CCNNNNNNNGG 3 cut(s) 81, 349, 1156
BsmI GAATGC 1 cut(s) 1618
BsnI GGCC 5 cut(s) 353, 758, 1149, 1365, 1418
Bsp1286I GDGCHC 2 cut(s) 434, 1641
Bsp143I GATC 3 cut(s) 510, 1066, 1227
Bsp19I CCATGG 1 cut(s) 348
BspACI CCGC 8 cut(s) 115, 222, 310, 418, 435, 438, 764, 878
BspANI GGCC 5 cut(s) 353, 758, 1149, 1365, 1418
BspCNI CTCAG 1 cut(s) 210
BspLI GGNNCC 6 cut(s) 138, 433, 475, 858, 1008, 1638
BspMI ACCTGC 1 cut(s) 945
BspT107I GGYRCC 2 cut(s) 473, 1636
BsrDI GCAATG 1 cut(s) 1675
BsrFI RCCGGY 1 cut(s) 1418
BsrI ACTGG 1 cut(s) 302
BssAI RCCGGY 1 cut(s) 1418
BssECI CCNNGG 3 cut(s) 80, 348, 759
BssMI GATC 3 cut(s) 510, 1066, 1227
BssNI GRCGYC 3 cut(s) 162, 231, 1017
BssT1I CCWWGG 2 cut(s) 80, 348
Bst2UI CCWGG 1 cut(s) 761
Bst4CI ACNGT 4 cut(s) 141, 581, 805, 923
Bst6I CTCTTC 3 cut(s) 310, 1308, 1793
BstACI GRCGYC 3 cut(s) 162, 231, 1017
BstC8I GCNNGC 4 cut(s) 737, 1420, 1577, 1682
BstDEI CTNAG 2 cut(s) 197, 569
BstDSI CCRYGG 1 cut(s) 348
BstENI CCTNNNNNAGG 1 cut(s) 1154
BstF5I GGATG 5 cut(s) 75, 550, 967, 1259, 1702
BstH2I RGCGCY 2 cut(s) 8, 1076
BstHHI GCGC 3 cut(s) 7, 1075, 1324
BstKTI GATC 3 cut(s) 513, 1069, 1230
BstMBI GATC 3 cut(s) 510, 1066, 1227
BstMWI GCNNNNNNNGC 2 cut(s) 574, 1343
BstNI CCWGG 1 cut(s) 761
BstSCI CCNGG 3 cut(s) 759, 859, 1692
BstSLI GKGCMC 1 cut(s) 1641
BstV1I GCAGC 1 cut(s) 1244
BstV2I GAAGAC 1 cut(s) 439
BsuI GTATCC 1 cut(s) 582
BsuRI GGCC 5 cut(s) 353, 758, 1149, 1365, 1418
BtgI CCRYGG 1 cut(s) 348
BtsCI GGATG 5 cut(s) 75, 550, 967, 1259, 1702
BtsI GCAGTG 2 cut(s) 560, 1052
BtsIMutI CAGTG 5 cut(s) 295, 560, 928, 1052, 1771
BveI ACCTGC 1 cut(s) 945
Cac8I GCNNGC 4 cut(s) 737, 1420, 1577, 1682
CaiI CAGNNNCTG 1 cut(s) 37
CfoI GCGC 3 cut(s) 7, 1075, 1324
Cfr10I RCCGGY 1 cut(s) 1418
Cfr13I GGNCC 2 cut(s) 352, 757
CseI GACGC 2 cut(s) 170, 1781
Csp6I GTAC 4 cut(s) 85, 401, 474, 1532
CviAII CATG 7 cut(s) 125, 349, 503, 631, 1423, 1529, 1685
CviQI GTAC 4 cut(s) 85, 401, 474, 1532
DdeI CTNAG 2 cut(s) 197, 569
DpnI GATC 3 cut(s) 512, 1068, 1229
DpnII GATC 3 cut(s) 510, 1066, 1227
DraI TTTAAA 1 cut(s) 1785
EaeI YGGCCR 1 cut(s) 1363
Eam1104I CTCTTC 3 cut(s) 310, 1308, 1793
EarI CTCTTC 3 cut(s) 310, 1308, 1793
EciI GGCGGA 2 cut(s) 424, 893
Eco130I CCWWGG 2 cut(s) 80, 348
Eco24I GRGCYC 1 cut(s) 434
EcoNI CCTNNNNNAGG 1 cut(s) 1154
EcoRII CCWGG 1 cut(s) 759
EcoT14I CCWWGG 2 cut(s) 80, 348
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 1 cut(s) 434
ErhI CCWWGG 2 cut(s) 80, 348
FaeI CATG 7 cut(s) 128, 352, 506, 634, 1426, 1532, 1688
FatI CATG 7 cut(s) 124, 348, 502, 630, 1422, 1528, 1684
FauI CCCGC 2 cut(s) 317, 425
FbaI TGATCA 1 cut(s) 510
Fnu4HI GCNGC 3 cut(s) 115, 438, 1258
FokI GGATG 5 cut(s) 62, 557, 974, 1266, 1709
FriOI GRGCYC 1 cut(s) 434
Fsp4HI GCNGC 3 cut(s) 115, 438, 1258
FspBI CTAG 3 cut(s) 1076, 1179, 1760
GlaI GCGC 3 cut(s) 6, 1074, 1323
GluI GCNGC 3 cut(s) 115, 438, 1258
GsuI CTGGAG 1 cut(s) 875
HaeII RGCGCY 2 cut(s) 8, 1076
HaeIII GGCC 5 cut(s) 353, 758, 1149, 1365, 1418
HapII CCGG 3 cut(s) 860, 1419, 1694
HgaI GACGC 2 cut(s) 170, 1781
HhaI GCGC 3 cut(s) 7, 1075, 1324
Hin1I GRCGYC 3 cut(s) 162, 231, 1017
Hin1II CATG 7 cut(s) 128, 352, 506, 634, 1426, 1532, 1688
Hin6I GCGC 3 cut(s) 5, 1073, 1322
HinP1I GCGC 3 cut(s) 5, 1073, 1322
HindIII AAGCTT 1 cut(s) 1184
HinfI GANTC 7 cut(s) 260, 405, 527, 680, 1060, 1277, 1377
HpaII CCGG 3 cut(s) 860, 1419, 1694
HphI GGTGA 5 cut(s) 160, 211, 337, 1490, 1532
Hpy166II GTNNAC 2 cut(s) 122, 915
Hpy188I TCNGA 5 cut(s) 160, 490, 588, 752, 1797
Hpy188III TCNNGA 7 cut(s) 199, 854, 905, 1064, 1088, 1356, 1736
Hpy8I GTNNAC 2 cut(s) 122, 915
Hpy99I CGWCG 3 cut(s) 164, 413, 1385
HpyAV CCTTC 7 cut(s) 222, 298, 467, 868, 944, 1259, 1664
HpyCH4III ACNGT 4 cut(s) 141, 581, 805, 923
HpyCH4IV ACGT 3 cut(s) 231, 1017, 1626
HpyF10VI GCNNNNNNNGC 2 cut(s) 574, 1343
HpyF3I CTNAG 2 cut(s) 197, 569
HpySE526I ACGT 3 cut(s) 231, 1017, 1626
Hsp92I GRCGYC 3 cut(s) 162, 231, 1017
Hsp92II CATG 7 cut(s) 128, 352, 506, 634, 1426, 1532, 1688
HspAI GCGC 3 cut(s) 5, 1073, 1322
KpnI GGTACC 1 cut(s) 477
KroI GCCGGC 1 cut(s) 1418
KroNI GCCGGC 1 cut(s) 1420
Ksp22I TGATCA 1 cut(s) 510
Kzo9I GATC 3 cut(s) 510, 1066, 1227
LmnI GCTCC 4 cut(s) 24, 210, 437, 856
Lsp1109I GCAGC 1 cut(s) 1244
LweI GCATC 5 cut(s) 535, 711, 955, 1244, 1426
MaeI CTAG 3 cut(s) 1076, 1179, 1760
MaeII ACGT 3 cut(s) 231, 1017, 1626
MaeIII GTNAC 5 cut(s) 141, 227, 649, 1123, 1543
MalI GATC 3 cut(s) 512, 1068, 1229
MboI GATC 3 cut(s) 510, 1066, 1227
MboII GAAGA 5 cut(s) 283, 297, 439, 1325, 1386
MhlI GDGCHC 2 cut(s) 434, 1641
MluCI AATT 8 cut(s) 52, 59, 706, 777, 807, 1245, 1753, 1769
MlyI GAGTC 2 cut(s) 254, 399
MmeI TCCRAC 3 cut(s) 183, 939, 1141
Mph1103I ATGCAT 1 cut(s) 726
MroNI GCCGGC 1 cut(s) 1418
MslI CAYNNNNRTG 1 cut(s) 14
MspI CCGG 3 cut(s) 860, 1419, 1694
MspR9I CCNGG 3 cut(s) 761, 861, 1694
Mva1269I GAATGC 1 cut(s) 1618
MvaI CCWGG 1 cut(s) 761
MwoI GCNNNNNNNGC 2 cut(s) 574, 1343
NaeI GCCGGC 1 cut(s) 1420
NciI CCSGG 2 cut(s) 861, 1694
NcoI CCATGG 1 cut(s) 348
NdeII GATC 3 cut(s) 510, 1066, 1227
NgoMIV GCCGGC 1 cut(s) 1418
NlaIII CATG 7 cut(s) 128, 352, 506, 634, 1426, 1532, 1688
NlaIV GGNNCC 6 cut(s) 138, 433, 475, 858, 1008, 1638
NmeAIII GCCGAG 1 cut(s) 1391
NmuCI GTSAC 3 cut(s) 227, 649, 1543
NsiI ATGCAT 1 cut(s) 726
PcsI WCGNNNNNNNCGW 1 cut(s) 405
PctI GAATGC 1 cut(s) 1618
PdiI GCCGGC 1 cut(s) 1420
PfeI GAWTC 5 cut(s) 527, 680, 1060, 1277, 1377
Pfl23II CGTACG 1 cut(s) 400
PflMI CCANNNNNTGG 1 cut(s) 81
PkrI GCNGC 3 cut(s) 116, 439, 1259
PleI GAGTC 2 cut(s) 254, 399
PpsI GAGTC 2 cut(s) 254, 399
PshBI ATTAAT 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 759
PspGI CCWGG 1 cut(s) 759
PspLI CGTACG 1 cut(s) 400
PspN4I GGNNCC 6 cut(s) 138, 433, 475, 858, 1008, 1638
PspPI GGNCC 2 cut(s) 352, 757
PstNI CAGNNNCTG 1 cut(s) 37
RsaI GTAC 4 cut(s) 86, 402, 475, 1533
RsaNI GTAC 4 cut(s) 85, 401, 474, 1532
RseI CAYNNNNRTG 1 cut(s) 14
SatI GCNGC 3 cut(s) 115, 438, 1258
Sau3AI GATC 3 cut(s) 510, 1066, 1227
Sau96I GGNCC 2 cut(s) 352, 757
SchI GAGTC 2 cut(s) 254, 399
ScrFI CCNGG 3 cut(s) 761, 861, 1694
SduI GDGCHC 2 cut(s) 434, 1641
SfaNI GCATC 5 cut(s) 535, 711, 955, 1244, 1426
SmiMI CAYNNNNRTG 1 cut(s) 14
SmlI CTYRAG 1 cut(s) 1505
SmoI CTYRAG 1 cut(s) 1505
Sse9I AATT 8 cut(s) 52, 59, 706, 777, 807, 1245, 1753, 1769
SsiI CCGC 8 cut(s) 115, 222, 310, 418, 435, 438, 764, 878
SspI AATATT 1 cut(s) 1489
SspMI CTAG 3 cut(s) 1076, 1179, 1760
StyD4I CCNGG 3 cut(s) 759, 859, 1692
StyI CCWWGG 2 cut(s) 80, 348
TaaI ACNGT 4 cut(s) 141, 581, 805, 923
TaiI ACGT 3 cut(s) 234, 1020, 1629
TaqI TCGA 2 cut(s) 771, 1383
TasI AATT 8 cut(s) 52, 59, 706, 777, 807, 1245, 1753, 1769
TauI GCSGC 2 cut(s) 117, 440
TfiI GAWTC 5 cut(s) 527, 680, 1060, 1277, 1377
TscAI CASTG 5 cut(s) 302, 560, 928, 1052, 1771
TseFI GTSAC 3 cut(s) 227, 649, 1543
TseI GCWGC 1 cut(s) 1257
Tsp45I GTSAC 3 cut(s) 227, 649, 1543
TspDTI ATGAA 9 cut(s) 491, 619, 789, 999, 1184, 1214, 1439, 1577, 1604
TspGWI ACGGA 2 cut(s) 433, 539
TspRI CASTG 5 cut(s) 302, 560, 928, 1052, 1771
Van91I CCANNNNNTGG 1 cut(s) 81
VspI ATTAAT 1 cut(s) 828
XagI CCTNNNNNAGG 1 cut(s) 1154
XspI CTAG 3 cut(s) 1076, 1179, 1760
ZraI GACGTC 2 cut(s) 232, 1018
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.