Retroviral aspartyl protease
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1073200.v1.1 |
| pyrus_communis | pycom03g10520 pycom07g15700 pycom11g19440 pycom13g14230 pycom420g00720 |
| rosa_roxburghii | Rroxscaffold_7G00173200 |
| rosa_wichuraiana | Rw5G041380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 136 |
| AgsI | TTSAA | 2 cut(s) | 83, 108 |
| AlwI | GGATC | 1 cut(s) | 121 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| AspS9I | GGNCC | 1 cut(s) | 179 |
| AvaII | GGWCC | 1 cut(s) | 179 |
| BbsI | GAAGAC | 1 cut(s) | 197 |
| BbvI | GCAGC | 1 cut(s) | 58 |
| BceAI | ACGGC | 2 cut(s) | 53, 157 |
| BfaI | CTAG | 2 cut(s) | 15, 156 |
| BglII | AGATCT | 1 cut(s) | 110 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| Bme18I | GGWCC | 1 cut(s) | 179 |
| BmgT120I | GGNCC | 1 cut(s) | 179 |
| BpiI | GAAGAC | 1 cut(s) | 197 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseXI | GCAGC | 1 cut(s) | 58 |
| BsiSI | CCGG | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 136 |
| Bsp143I | GATC | 3 cut(s) | 110, 118, 126 |
| BspPI | GGATC | 1 cut(s) | 121 |
| BssMI | GATC | 3 cut(s) | 110, 118, 126 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 3 cut(s) | 113, 121, 129 |
| BstMBI | GATC | 3 cut(s) | 110, 118, 126 |
| BstV1I | GCAGC | 1 cut(s) | 58 |
| BstV2I | GAAGAC | 1 cut(s) | 197 |
| BstX2I | RGATCY | 2 cut(s) | 110, 126 |
| BstYI | RGATCY | 2 cut(s) | 110, 126 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| Cfr13I | GGNCC | 1 cut(s) | 179 |
| CviAII | CATG | 1 cut(s) | 41 |
| CviJI | RGCY | 1 cut(s) | 151 |
| CviKI_1 | RGCY | 1 cut(s) | 151 |
| DpnI | GATC | 3 cut(s) | 112, 120, 128 |
| DpnII | GATC | 3 cut(s) | 110, 118, 126 |
| Eco47I | GGWCC | 1 cut(s) | 179 |
| FaeI | CATG | 1 cut(s) | 44 |
| FaiI | YATR | 2 cut(s) | 42, 177 |
| FatI | CATG | 1 cut(s) | 40 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| FspBI | CTAG | 2 cut(s) | 15, 156 |
| GluI | GCNGC | 1 cut(s) | 72 |
| HapII | CCGG | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 44 |
| HincII | GTYRAC | 1 cut(s) | 214 |
| HindII | GTYRAC | 1 cut(s) | 214 |
| HpaI | GTTAAC | 1 cut(s) | 214 |
| HpaII | CCGG | 1 cut(s) | 231 |
| Hpy166II | GTNNAC | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 2 cut(s) | 189, 242 |
| Hpy188III | TCNNGA | 2 cut(s) | 108, 116 |
| Hpy8I | GTNNAC | 1 cut(s) | 214 |
| HpyAV | CCTTC | 2 cut(s) | 114, 140 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Hsp92II | CATG | 1 cut(s) | 44 |
| KspAI | GTTAAC | 1 cut(s) | 214 |
| Kzo9I | GATC | 3 cut(s) | 110, 118, 126 |
| LpnPI | CCDG | 3 cut(s) | 175, 208, 244 |
| Lsp1109I | GCAGC | 1 cut(s) | 58 |
| MaeI | CTAG | 2 cut(s) | 15, 156 |
| MalI | GATC | 3 cut(s) | 112, 120, 128 |
| MboI | GATC | 3 cut(s) | 110, 118, 126 |
| MboII | GAAGA | 1 cut(s) | 202 |
| MflI | RGATCY | 2 cut(s) | 110, 126 |
| MluCI | AATT | 3 cut(s) | 44, 53, 198 |
| MnlI | CCTC | 3 cut(s) | 43, 111, 162 |
| MseI | TTAA | 2 cut(s) | 23, 213 |
| MspI | CCGG | 1 cut(s) | 231 |
| NdeII | GATC | 3 cut(s) | 110, 118, 126 |
| NlaIII | CATG | 1 cut(s) | 44 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| PspPI | GGNCC | 1 cut(s) | 179 |
| PsuI | RGATCY | 2 cut(s) | 110, 126 |
| SaqAI | TTAA | 2 cut(s) | 23, 213 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 3 cut(s) | 110, 118, 126 |
| Sau96I | GGNCC | 1 cut(s) | 179 |
| SetI | ASST | 2 cut(s) | 91, 169 |
| SinI | GGWCC | 1 cut(s) | 179 |
| Sse9I | AATT | 3 cut(s) | 44, 53, 198 |
| SspMI | CTAG | 2 cut(s) | 15, 156 |
| TasI | AATT | 3 cut(s) | 44, 53, 198 |
| Tru1I | TTAA | 2 cut(s) | 23, 213 |
| Tru9I | TTAA | 2 cut(s) | 23, 213 |
| TseI | GCWGC | 1 cut(s) | 71 |
| TspDTI | ATGAA | 1 cut(s) | 57 |
| VpaK11BI | GGWCC | 1 cut(s) | 179 |
| XspI | CTAG | 2 cut(s) | 15, 156 |