Adenosylhomocysteinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23810 AT4G13940 AT4G13940 AT4G13940 AT4G13940 |
| fragaria_vesca | FvH4_4g13280 |
| malus_domestica | MD05G1230000.v1.1 MD13G1281900.v1.1 |
| prunus_persica | Prupe.1G165200_v2.0.a1 |
| pyrus_communis | pycom420g00960 pycom420g00980 |
| rosa_chinensis | RchiOBHm_Chr4g0413571 |
| rosa_laevigata | RLG00000008212 |
| rosa_multiflora | Rmu_sc0000883.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00357440 |
| rosa_rugosa | Rorug04G0120900 |
| rosa_samantha | Rh4AG180700 Rh4BG179900 Rh4CG191800 Rh4DG175800 |
| rosa_wichuraiana | Rw4G015090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 491, 1148 |
| Acc65I | GGTACC | 2 cut(s) | 377, 468 |
| AccB1I | GGYRCC | 3 cut(s) | 128, 377, 468 |
| AccI | GTMKAC | 1 cut(s) | 306 |
| AccII | CGCG | 3 cut(s) | 198, 264, 756 |
| AccIII | TCCGGA | 1 cut(s) | 1350 |
| AclWI | GGATC | 8 cut(s) | 328, 757, 770, 1326, 1337, 1348, 1350, 1361 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AcuI | CTGAAG | 1 cut(s) | 797 |
| AcyI | GRCGYC | 3 cut(s) | 129, 321, 522 |
| AfaI | GTAC | 5 cut(s) | 245, 379, 470, 556, 620 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 53, 54, 273, 274, 287, 1271 |
| AgeI | ACCGGT | 3 cut(s) | 68, 989, 1415 |
| AgsI | TTSAA | 3 cut(s) | 52, 110, 451 |
| AjnI | CCWGG | 5 cut(s) | 168, 218, 237, 408, 792 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 473, 505 |
| AleI | CACNNNNGTG | 1 cut(s) | 1391 |
| AluBI | AGCT | 4 cut(s) | 421, 1210, 1217, 1222 |
| AluI | AGCT | 4 cut(s) | 421, 1210, 1217, 1222 |
| Alw21I | GWGCWC | 2 cut(s) | 149, 257 |
| Alw44I | GTGCAC | 1 cut(s) | 253 |
| AlwI | GGATC | 8 cut(s) | 328, 757, 770, 1326, 1337, 1348, 1350, 1361 |
| Aor13HI | TCCGGA | 1 cut(s) | 1350 |
| AoxI | GGCC | 6 cut(s) | 7, 57, 277, 657, 808, 1192 |
| ApaI | GGGCCC | 2 cut(s) | 61, 281 |
| ApaLI | GTGCAC | 1 cut(s) | 253 |
| ApeKI | GCWGC | 2 cut(s) | 728, 731 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| AseI | ATTAAT | 1 cut(s) | 576 |
| AsiGI | ACCGGT | 3 cut(s) | 68, 989, 1415 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 685, 810 |
| Asp718I | GGTACC | 2 cut(s) | 377, 468 |
| AspLEI | GCGC | 7 cut(s) | 131, 206, 264, 266, 728, 1119, 1291 |
| AsuC2I | CCSGG | 2 cut(s) | 6, 282 |
| AsuNHI | GCTAGC | 1 cut(s) | 548 |
| AvaII | GGWCC | 6 cut(s) | 35, 136, 172, 290, 1274, 1413 |
| BaeGI | GKGCMC | 4 cut(s) | 61, 257, 281, 790 |
| BamHI | GGATCC | 2 cut(s) | 1342, 1353 |
| BanI | GGYRCC | 3 cut(s) | 128, 377, 468 |
| BanII | GRGCYC | 2 cut(s) | 61, 281 |
| BauI | CACGAG | 1 cut(s) | 338 |
| BbsI | GAAGAC | 3 cut(s) | 205, 387, 1144 |
| Bbv12I | GWGCWC | 2 cut(s) | 149, 257 |
| BbvCI | CCTCAGC | 2 cut(s) | 354, 1188 |
| BbvI | GCAGC | 2 cut(s) | 715, 718 |
| BccI | CCATC | 5 cut(s) | 95, 197, 437, 440, 638 |
| BceAI | ACGGC | 3 cut(s) | 194, 328, 612 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 13, 47 |
| BciT130I | CCWGG | 5 cut(s) | 170, 220, 239, 410, 794 |
| BciVI | GTATCC | 1 cut(s) | 695 |
| BcnI | CCSGG | 2 cut(s) | 6, 282 |
| BfaI | CTAG | 2 cut(s) | 549, 1391 |
| BfmI | CTRYAG | 1 cut(s) | 1294 |
| BfoI | RGCGCY | 2 cut(s) | 132, 207 |
| BfuI | GTATCC | 1 cut(s) | 695 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 285, 794 |
| BisI | GCNGC | 7 cut(s) | 22, 180, 183, 186, 207, 729, 732 |
| BlpI | GCTNAGC | 1 cut(s) | 1218 |
| BlsI | GCNGC | 7 cut(s) | 23, 181, 184, 187, 208, 730, 733 |
| BmcAI | AGTACT | 2 cut(s) | 245, 556 |
| Bme1390I | CCNGG | 7 cut(s) | 6, 170, 220, 239, 282, 410, 794 |
| Bme18I | GGWCC | 6 cut(s) | 35, 136, 172, 290, 1274, 1413 |
| BmrFI | CCNGG | 7 cut(s) | 6, 170, 220, 239, 282, 410, 794 |
| BmrI | ACTGGG | 1 cut(s) | 283 |
| BmsI | GCATC | 5 cut(s) | 72, 531, 614, 1128, 1182 |
| BmtI | GCTAGC | 1 cut(s) | 552 |
| BmuI | ACTGGG | 1 cut(s) | 283 |
| BpiI | GAAGAC | 3 cut(s) | 205, 387, 1144 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1206, 1238 |
| BpmI | CTGGAG | 2 cut(s) | 221, 776 |
| Bpu10I | CCTNAGC | 2 cut(s) | 354, 1188 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1218 |
| BpuEI | CTTGAG | 3 cut(s) | 722, 848, 1115 |
| BpuMI | CCSGG | 2 cut(s) | 6, 282 |
| Bsa29I | ATCGAT | 1 cut(s) | 774 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1336 |
| BsaHI | GRCGYC | 3 cut(s) | 129, 321, 522 |
| BsaI | GGTCTC | 3 cut(s) | 224, 503, 1154 |
| BsaWI | WCCGGW | 5 cut(s) | 68, 374, 989, 1350, 1415 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 146, 176, 233, 263 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 53, 54, 273, 274, 287, 1271 |
| Bse118I | RCCGGY | 5 cut(s) | 68, 518, 989, 1264, 1415 |
| Bse1I | ACTGG | 4 cut(s) | 251, 278, 1174, 1415 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1336 |
| BseAI | TCCGGA | 1 cut(s) | 1350 |
| BseBI | CCWGG | 5 cut(s) | 170, 220, 239, 410, 794 |
| BseCI | ATCGAT | 1 cut(s) | 774 |
| BseGI | GGATG | 7 cut(s) | 87, 629, 838, 862, 910, 934, 958 |
| BseJI | GATNNNNATC | 1 cut(s) | 1336 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 53, 54, 273, 274, 287, 1271 |
| BseMII | CTCAG | 4 cut(s) | 345, 759, 1179, 1246 |
| BseNI | ACTGG | 4 cut(s) | 251, 278, 1174, 1415 |
| BsePI | GCGCGC | 1 cut(s) | 262 |
| BseRI | GAGGAG | 3 cut(s) | 371, 374, 521 |
| BseSI | GKGCMC | 4 cut(s) | 61, 257, 281, 790 |
| BseXI | GCAGC | 2 cut(s) | 715, 718 |
| Bsh1236I | CGCG | 3 cut(s) | 198, 264, 756 |
| BshFI | GGCC | 6 cut(s) | 9, 59, 279, 659, 810, 1194 |
| BshNI | GGYRCC | 3 cut(s) | 128, 377, 468 |
| BshTI | ACCGGT | 3 cut(s) | 68, 989, 1415 |
| BshVI | ATCGAT | 1 cut(s) | 774 |
| BsiHKAI | GWGCWC | 2 cut(s) | 149, 257 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 53, 54, 273, 274, 287, 1271 |
| BsnI | GGCC | 6 cut(s) | 9, 59, 279, 659, 810, 1194 |
| Bso31I | GGTCTC | 3 cut(s) | 224, 503, 1154 |
| Bsp120I | GGGCCC | 2 cut(s) | 57, 277 |
| Bsp1286I | GDGCHC | 5 cut(s) | 61, 149, 257, 281, 790 |
| Bsp13I | TCCGGA | 1 cut(s) | 1350 |
| Bsp143I | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1218 |
| BspANI | GGCC | 6 cut(s) | 9, 59, 279, 659, 810, 1194 |
| BspCNI | CTCAG | 4 cut(s) | 346, 760, 1180, 1245 |
| BspDI | ATCGAT | 1 cut(s) | 774 |
| BspEI | TCCGGA | 1 cut(s) | 1350 |
| BspFNI | CGCG | 3 cut(s) | 198, 264, 756 |
| BspHI | TCATGA | 1 cut(s) | 669 |
| BspOI | GCTAGC | 1 cut(s) | 552 |
| BspPI | GGATC | 8 cut(s) | 328, 757, 770, 1326, 1337, 1348, 1350, 1361 |
| BspT107I | GGYRCC | 3 cut(s) | 128, 377, 468 |
| BspTNI | GGTCTC | 3 cut(s) | 224, 503, 1154 |
| BsrFI | RCCGGY | 5 cut(s) | 68, 518, 989, 1264, 1415 |
| BsrI | ACTGG | 4 cut(s) | 251, 278, 1174, 1415 |
| BssAI | RCCGGY | 5 cut(s) | 68, 518, 989, 1264, 1415 |
| BssHII | GCGCGC | 1 cut(s) | 262 |
| BssMI | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| BssNI | GRCGYC | 3 cut(s) | 129, 321, 522 |
| BssSI | CACGAG | 1 cut(s) | 338 |
| BssT1I | CCWWGG | 1 cut(s) | 1401 |
| Bst2BI | CACGAG | 1 cut(s) | 338 |
| Bst2UI | CCWGG | 5 cut(s) | 170, 220, 239, 410, 794 |
| Bst4CI | ACNGT | 1 cut(s) | 1091 |
| BstACI | GRCGYC | 3 cut(s) | 129, 321, 522 |
| BstC8I | GCNNGC | 7 cut(s) | 61, 196, 264, 546, 550, 744, 1287 |
| BstDEI | CTNAG | 5 cut(s) | 354, 768, 1188, 1218, 1232 |
| BstDSI | CCRYGG | 2 cut(s) | 867, 891 |
| BstF5I | GGATG | 7 cut(s) | 87, 629, 838, 862, 910, 934, 958 |
| BstFNI | CGCG | 3 cut(s) | 198, 264, 756 |
| BstH2I | RGCGCY | 2 cut(s) | 132, 207 |
| BstHHI | GCGC | 7 cut(s) | 131, 206, 264, 266, 728, 1119, 1291 |
| BstKTI | GATC | 9 cut(s) | 298, 303, 336, 752, 774, 778, 1334, 1345, 1356 |
| BstMBI | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 128, 185, 191, 215, 261, 285, 794 |
| BstNI | CCWGG | 5 cut(s) | 170, 220, 239, 410, 794 |
| BstNSI | RCATGY | 1 cut(s) | 1087 |
| BstSCI | CCNGG | 7 cut(s) | 4, 168, 218, 237, 280, 408, 792 |
| BstSFI | CTRYAG | 1 cut(s) | 1294 |
| BstSLI | GKGCMC | 4 cut(s) | 61, 257, 281, 790 |
| BstUI | CGCG | 3 cut(s) | 198, 264, 756 |
| BstV1I | GCAGC | 2 cut(s) | 715, 718 |
| BstV2I | GAAGAC | 3 cut(s) | 205, 387, 1144 |
| BstX2I | RGATCY | 4 cut(s) | 749, 1331, 1342, 1353 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1393 |
| BstYI | RGATCY | 4 cut(s) | 749, 1331, 1342, 1353 |
| Bsu15I | ATCGAT | 1 cut(s) | 774 |
| BsuI | GTATCC | 1 cut(s) | 695 |
| BsuRI | GGCC | 6 cut(s) | 9, 59, 279, 659, 810, 1194 |
| BsuTUI | ATCGAT | 1 cut(s) | 774 |
| BtgI | CCRYGG | 2 cut(s) | 867, 891 |
| BtgZI | GCGATG | 1 cut(s) | 175 |
| BtsCI | GGATG | 7 cut(s) | 87, 629, 838, 862, 910, 934, 958 |
| BtsIMutI | CAGTG | 2 cut(s) | 1167, 1264 |
| Cac8I | GCNNGC | 7 cut(s) | 61, 196, 264, 546, 550, 744, 1287 |
| CciI | TCATGA | 1 cut(s) | 669 |
| CfoI | GCGC | 7 cut(s) | 131, 206, 264, 266, 728, 1119, 1291 |
| Cfr10I | RCCGGY | 5 cut(s) | 68, 518, 989, 1264, 1415 |
| ClaI | ATCGAT | 1 cut(s) | 774 |
| CseI | GACGC | 2 cut(s) | 329, 511 |
| Csp6I | GTAC | 5 cut(s) | 244, 378, 469, 555, 619 |
| CspAI | ACCGGT | 3 cut(s) | 68, 989, 1415 |
| CviAII | CATG | 7 cut(s) | 18, 82, 670, 1009, 1021, 1084, 1424 |
| CviQI | GTAC | 5 cut(s) | 244, 378, 469, 555, 619 |
| DdeI | CTNAG | 5 cut(s) | 354, 768, 1188, 1218, 1232 |
| DinI | GGCGCC | 1 cut(s) | 130 |
| DpnI | GATC | 9 cut(s) | 297, 302, 335, 751, 773, 777, 1333, 1344, 1355 |
| DpnII | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 491, 1148 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 491, 1148 |
| EciI | GGCGGA | 2 cut(s) | 303, 1421 |
| Eco130I | CCWWGG | 1 cut(s) | 1401 |
| Eco147I | AGGCCT | 1 cut(s) | 810 |
| Eco24I | GRGCYC | 2 cut(s) | 61, 281 |
| Eco31I | GGTCTC | 3 cut(s) | 224, 503, 1154 |
| Eco32I | GATATC | 1 cut(s) | 973 |
| Eco47I | GGWCC | 6 cut(s) | 35, 136, 172, 290, 1274, 1413 |
| Eco57I | CTGAAG | 1 cut(s) | 797 |
| EcoO109I | RGGNCCY | 4 cut(s) | 57, 277, 278, 1192 |
| EcoRI | GAATTC | 1 cut(s) | 29 |
| EcoRII | CCWGG | 5 cut(s) | 168, 218, 237, 408, 792 |
| EcoRV | GATATC | 1 cut(s) | 973 |
| EcoT14I | CCWWGG | 1 cut(s) | 1401 |
| EcoT38I | GRGCYC | 2 cut(s) | 61, 281 |
| EgeI | GGCGCC | 1 cut(s) | 130 |
| EheI | GGCGCC | 1 cut(s) | 130 |
| ErhI | CCWWGG | 1 cut(s) | 1401 |
| FaeI | CATG | 7 cut(s) | 21, 85, 673, 1012, 1024, 1087, 1427 |
| FatI | CATG | 7 cut(s) | 17, 81, 669, 1008, 1020, 1083, 1423 |
| FauI | CCCGC | 3 cut(s) | 68, 203, 577 |
| FblI | GTMKAC | 1 cut(s) | 306 |
| Fnu4HI | GCNGC | 7 cut(s) | 22, 180, 183, 186, 207, 729, 732 |
| FokI | GGATG | 7 cut(s) | 74, 636, 845, 869, 917, 941, 965 |
| FriOI | GRGCYC | 2 cut(s) | 61, 281 |
| Fsp4HI | GCNGC | 7 cut(s) | 22, 180, 183, 186, 207, 729, 732 |
| FspBI | CTAG | 2 cut(s) | 549, 1391 |
| GlaI | GCGC | 7 cut(s) | 130, 205, 263, 265, 727, 1118, 1290 |
| GluI | GCNGC | 7 cut(s) | 22, 180, 183, 186, 207, 729, 732 |
| GsuI | CTGGAG | 2 cut(s) | 221, 776 |
| HaeII | RGCGCY | 2 cut(s) | 132, 207 |
| HaeIII | GGCC | 6 cut(s) | 9, 59, 279, 659, 810, 1194 |
| HgaI | GACGC | 2 cut(s) | 329, 511 |
| HhaI | GCGC | 7 cut(s) | 131, 206, 264, 266, 728, 1119, 1291 |
| Hin1I | GRCGYC | 3 cut(s) | 129, 321, 522 |
| Hin1II | CATG | 7 cut(s) | 21, 85, 673, 1012, 1024, 1087, 1427 |
| Hin6I | GCGC | 7 cut(s) | 129, 204, 262, 264, 726, 1117, 1289 |
| HinP1I | GCGC | 7 cut(s) | 129, 204, 262, 264, 726, 1117, 1289 |
| HincII | GTYRAC | 2 cut(s) | 307, 1015 |
| HindII | GTYRAC | 2 cut(s) | 307, 1015 |
| HindIII | AAGCTT | 1 cut(s) | 1208 |
| HinfI | GANTC | 2 cut(s) | 345, 587 |
| Hpy166II | GTNNAC | 3 cut(s) | 255, 307, 1015 |
| Hpy188III | TCNNGA | 7 cut(s) | 331, 367, 526, 670, 827, 1094, 1351 |
| Hpy8I | GTNNAC | 3 cut(s) | 255, 307, 1015 |
| Hpy99I | CGWCG | 3 cut(s) | 308, 311, 314 |
| HpyAV | CCTTC | 7 cut(s) | 58, 217, 475, 800, 821, 1205, 1374 |
| HpyCH4III | ACNGT | 1 cut(s) | 1091 |
| HpyCH4V | TGCA | 7 cut(s) | 153, 255, 544, 1053, 1087, 1383, 1423 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 128, 185, 191, 215, 261, 285, 794 |
| HpyF3I | CTNAG | 5 cut(s) | 354, 768, 1188, 1218, 1232 |
| Hsp92I | GRCGYC | 3 cut(s) | 129, 321, 522 |
| Hsp92II | CATG | 7 cut(s) | 21, 85, 673, 1012, 1024, 1087, 1427 |
| HspAI | GCGC | 7 cut(s) | 129, 204, 262, 264, 726, 1117, 1289 |
| KasI | GGCGCC | 1 cut(s) | 128 |
| Kpn2I | TCCGGA | 1 cut(s) | 1350 |
| KpnI | GGTACC | 2 cut(s) | 381, 472 |
| Kzo9I | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| LmnI | GCTCC | 2 cut(s) | 152, 1214 |
| Lsp1109I | GCAGC | 2 cut(s) | 715, 718 |
| LweI | GCATC | 5 cut(s) | 72, 531, 614, 1128, 1182 |
| MaeI | CTAG | 2 cut(s) | 549, 1391 |
| MaeIII | GTNAC | 7 cut(s) | 317, 592, 629, 763, 979, 992, 1061 |
| MalI | GATC | 9 cut(s) | 297, 302, 335, 751, 773, 777, 1333, 1344, 1355 |
| MboI | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| MboII | GAAGA | 9 cut(s) | 205, 387, 812, 890, 1039, 1045, 1144, 1341, 1441 |
| MflI | RGATCY | 4 cut(s) | 749, 1331, 1342, 1353 |
| MhlI | GDGCHC | 5 cut(s) | 61, 149, 257, 281, 790 |
| MluCI | AATT | 2 cut(s) | 29, 1305 |
| Mly113I | GGCGCC | 1 cut(s) | 129 |
| MlyI | GAGTC | 2 cut(s) | 354, 581 |
| MmeI | TCCRAC | 3 cut(s) | 475, 694, 1303 |
| MroI | TCCGGA | 1 cut(s) | 1350 |
| MroXI | GAANNNNTTC | 2 cut(s) | 685, 810 |
| MseI | TTAA | 2 cut(s) | 576, 1128 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1007, 1178, 1259, 1391 |
| MspA1I | CMGCKG | 3 cut(s) | 98, 141, 421 |
| MspR9I | CCNGG | 7 cut(s) | 6, 170, 220, 239, 282, 410, 794 |
| MvaI | CCWGG | 5 cut(s) | 170, 220, 239, 410, 794 |
| MvnI | CGCG | 3 cut(s) | 198, 264, 756 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 128, 185, 191, 215, 261, 285, 794 |
| NarI | GGCGCC | 1 cut(s) | 129 |
| NciI | CCSGG | 2 cut(s) | 6, 282 |
| NdeII | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| NheI | GCTAGC | 1 cut(s) | 548 |
| NlaIII | CATG | 7 cut(s) | 21, 85, 673, 1012, 1024, 1087, 1427 |
| NmeAIII | GCCGAG | 2 cut(s) | 105, 157 |
| NmuCI | GTSAC | 4 cut(s) | 317, 629, 763, 1061 |
| NspI | RCATGY | 1 cut(s) | 1087 |
| OliI | CACNNNNGTG | 1 cut(s) | 1391 |
| PagI | TCATGA | 1 cut(s) | 669 |
| PauI | GCGCGC | 1 cut(s) | 262 |
| PceI | AGGCCT | 1 cut(s) | 810 |
| PdmI | GAANNNNTTC | 2 cut(s) | 685, 810 |
| PfoI | TCCNGGA | 1 cut(s) | 237 |
| PinAI | ACCGGT | 3 cut(s) | 68, 989, 1415 |
| PkrI | GCNGC | 7 cut(s) | 23, 181, 184, 187, 208, 730, 733 |
| PleI | GAGTC | 2 cut(s) | 353, 581 |
| PluTI | GGCGCC | 1 cut(s) | 132 |
| PpsI | GAGTC | 2 cut(s) | 353, 581 |
| PshBI | ATTAAT | 1 cut(s) | 576 |
| Psp6I | CCWGG | 5 cut(s) | 168, 218, 237, 408, 792 |
| PspGI | CCWGG | 5 cut(s) | 168, 218, 237, 408, 792 |
| PspOMI | GGGCCC | 2 cut(s) | 57, 277 |
| PsuI | RGATCY | 4 cut(s) | 749, 1331, 1342, 1353 |
| PteI | GCGCGC | 1 cut(s) | 262 |
| PvuII | CAGCTG | 1 cut(s) | 421 |
| RsaI | GTAC | 5 cut(s) | 245, 379, 470, 556, 620 |
| RsaNI | GTAC | 5 cut(s) | 244, 378, 469, 555, 619 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1007, 1178, 1259, 1391 |
| SalI | GTCGAC | 1 cut(s) | 305 |
| SaqAI | TTAA | 2 cut(s) | 576, 1128 |
| SatI | GCNGC | 7 cut(s) | 22, 180, 183, 186, 207, 729, 732 |
| Sau3AI | GATC | 9 cut(s) | 295, 300, 333, 749, 771, 775, 1331, 1342, 1353 |
| ScaI | AGTACT | 2 cut(s) | 245, 556 |
| SchI | GAGTC | 2 cut(s) | 354, 581 |
| ScrFI | CCNGG | 7 cut(s) | 6, 170, 220, 239, 282, 410, 794 |
| SduI | GDGCHC | 5 cut(s) | 61, 149, 257, 281, 790 |
| SfaNI | GCATC | 5 cut(s) | 72, 531, 614, 1128, 1182 |
| SfcI | CTRYAG | 1 cut(s) | 1294 |
| SfoI | GGCGCC | 1 cut(s) | 130 |
| SgrAI | CRCCGGYG | 1 cut(s) | 518 |
| SgrDI | CGTCGACG | 1 cut(s) | 305 |
| SinI | GGWCC | 6 cut(s) | 35, 136, 172, 290, 1274, 1413 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1007, 1178, 1259, 1391 |
| SmlI | CTYRAG | 3 cut(s) | 737, 827, 1094 |
| SmoI | CTYRAG | 3 cut(s) | 737, 827, 1094 |
| Sse9I | AATT | 2 cut(s) | 29, 1305 |
| SseBI | AGGCCT | 1 cut(s) | 810 |
| SspDI | GGCGCC | 1 cut(s) | 128 |
| SspMI | CTAG | 2 cut(s) | 549, 1391 |
| StuI | AGGCCT | 1 cut(s) | 810 |
| StyD4I | CCNGG | 7 cut(s) | 4, 168, 218, 237, 280, 408, 792 |
| StyI | CCWWGG | 1 cut(s) | 1401 |
| TaaI | ACNGT | 1 cut(s) | 1091 |
| TaqI | TCGA | 4 cut(s) | 270, 306, 366, 774 |
| TasI | AATT | 2 cut(s) | 29, 1305 |
| TatI | WGTACW | 2 cut(s) | 243, 554 |
| TauI | GCSGC | 5 cut(s) | 24, 182, 185, 188, 209 |
| Tru1I | TTAA | 2 cut(s) | 576, 1128 |
| Tru9I | TTAA | 2 cut(s) | 576, 1128 |
| TscAI | CASTG | 2 cut(s) | 1174, 1264 |
| TseFI | GTSAC | 4 cut(s) | 317, 629, 763, 1061 |
| TseI | GCWGC | 2 cut(s) | 728, 731 |
| Tsp45I | GTSAC | 4 cut(s) | 317, 629, 763, 1061 |
| TspDTI | ATGAA | 4 cut(s) | 494, 891, 1046, 1187 |
| TspGWI | ACGGA | 5 cut(s) | 636, 679, 720, 856, 880 |
| TspRI | CASTG | 2 cut(s) | 1174, 1264 |
| VneI | GTGCAC | 1 cut(s) | 253 |
| VpaK11BI | GGWCC | 6 cut(s) | 35, 136, 172, 290, 1274, 1413 |
| VspI | ATTAAT | 1 cut(s) | 576 |
| XapI | RAATTY | 1 cut(s) | 29 |
| XceI | RCATGY | 1 cut(s) | 1087 |
| XmiI | GTMKAC | 1 cut(s) | 306 |
| XmnI | GAANNNNTTC | 2 cut(s) | 685, 810 |
| XspI | CTAG | 2 cut(s) | 549, 1391 |
| ZrmI | AGTACT | 2 cut(s) | 245, 556 |