Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_520

Orthogroup ID

OG0006543

Physical Location & Seq

Genomic Coordinates Reverse (-)

973921 .. 980965

Gene Structure 7045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom520g01280.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGATGAATGAAGAAAATGGAAGCAGCAGCAGCAGTCGCAGCAGCTTGGTGAGTGACGATGGTGGCGACATCGAGAATTTGGATTTGTTGGATGGAAGGAGGAGGACGTGCAGCCAACCACTTCTTAGCAAGAGGAAGAACACTACTTCTCAGATTGCCATTGTTGGTTCCAATCTCTGCTCCATCGAAAGCCTTGACTACGAGATATTTGAGAATGAAATATTCAAGCAGGACTGGAGGTCAGCTAAGAAGGTGCAAGTATTTCAGTATGTTGTGCTCAAGTGGGCTTTTGCGCTTCTCATCGGGATCGTTACTGGCCTCGTTGGCTTCTTCAATAATATTGCAGTTGAGAATATAGCTGGATTCAAGCTTCTTTTGACCACAGCTCTTATGTCTGACAAAAAATATTACAAGGCTTTTGCGGCATATGCTGCCATCAATGTAGCTCTAGCAGCAGCTGCAGCAGCTCTTTGTGCTTTTATTGCTCCTGCCGCAGCAGGTTCCGGCATTCCTGAGGTTAAAGCTTATCTAAATGGTGTCGATGCACATTCAATACTCGCTCCAAGCACTCTCTTTGTCAAGATTTTTGGTTCCATTCTTGGTGTGTCTGCCGGATTCGTGGTTGGTAAAGAAGGGCCCATGGTTCATACGGGTGCTTGCATAGCCTCTTTCCTCGGGCAGGGGGGCTCTCGCAAGTATCATTTAACTTGGTCATGGCTAAGATACTTCAAGAATGATTGCGACCGAAGAGACTTGGTCACATGTGGTGCTGCTGCTGGTGTGGCTGCTGCATTTCGTGCCCCAGTTGGTGGTGTTCTGTTTGCTCTTGAGGAGGCAGCTTCGTGGTGGCGGAGTGCTCTTCTTTGGAGGACATTTTTCACAACAGCAGTTGTTGCAATAGTTTTGAGAGGCTTTATACAATATTGTACTACAGGAAATTGTGGGTTATTTGGGGAAGGAGGTCTGATCATGTATGATGTCAGTGCAGCCGGTGCAACGTATAGTGGCCCCGATATACTAGCAGTGTTATTCCTAGGAACTGTTGGAGGTATTCTTGGAAGCATATATAACTATCTCGTGGACAAGGTCATACGAACTTATAGCATCATTCACGAAAAGGGTGCTGCTCCCAAAATCTTACTTGTTATCACCATTGCCCTCTTGACATCATGTCTTTCTTATGGCTTGCCATGGTTTGCAGAGTGCCAACTATGCCCTACTGACGAGAGTGTGAGTTGTCCTACTGTTGGCAAATCTGGTAACTATAAAAGTTTCAATTGCCCCTCGGGCTATTATAATGACCTCGCCTCCCTCTTTCTAAACACTAACGATGATGCCATTCGTAATCTATTCAGCACCAGTACAAAAAAAGAATTTCACATTTCCTCACTTTTCATCTTCTTTGCCGCCATTTACTGCCTCGGAATTATGACTTATGGCATTGCAATTCCTTCTGGGCTCTTTATCCCTGTCATATTAGCTGGAGCTTGCTATGGACGTCTTGTTGGGAGGTTGTTTGAATCAATCTCTACTCTAGACACAGGTCTATTTGCTCTACTAGGAGCTGCCTCCTTCCTGGGTGGCACTATGAGAATGACAGTCTCGCTCTGCATTATACTGCTTGAACTCACGAATGACTTACTGTTGCTTCCCCTTGTGATGTTGGTTCTCCTTATTTCAAAAACTGTGGCTGATAACTTCAACAAGGGAATTTACGACCAGATAGTCAAAATAAAAGGACTGCCTTATTTGGAGGCTCATGCAGAACCTTACATGAGGCAATTGGTCACAGCTGATGTTGCTACTGGACCATTGGTTACTTTTTCTGGGATTGAGAAGGTAGGGCGTATATTGGATGCTTTGAGGACTACGGGGCACAATGGATTTCCTGTGATTGATGAACCGCCTTTTTCAGATGCTCCAGAATTGTGCGGTCTTGTTTTAAGGTCTCATTTGCTTATTTTGCTCAAGGGTAAGGTTTTTTCAAGGGAGAGGGTTGTTTGTGGAGAAGAGATCCTACGGAGATTTGCCGCATTTGATTTCGCAAAGGCAGGGTCAGGAAAGGGAATCAAAGTGGAGGATCTTGATATTGAAGAAGAGGAGATCGATATGTATGTTGATCTCCATCCTATTACAAATGCATCTCCATACACAGTTGTTGAGACAATGTCACTTGCCAAAGCTGCTATTCTCTTTCGGAAACTCGGTCTCAGACACCTATGTTTGGTACCAAAGAGCCAAGGGAGACCTCCAATCGTCGGAATTCTAACGCGACATGACTTCATGCCGGAGCACATTTTGGGACTTTACCCGCATATAAAGGCTCATAAGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005247 GO:0005253 GO:0005254 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0008150 GO:0008308 GO:0008509 GO:0009705 GO:0015075 GO:0015103 GO:0015108 GO:0015267 GO:0015318 GO:0015698 GO:0016020 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098656 GO:0098660 GO:0098661 GO:0098805 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

779

Amino Acids

84.2

Weight (kDa)

7.47

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49890
fragaria_vesca	FvH4_1g25850 FvH4_1g25850
malus_domestica	MD00G1030600.v1.1
prunus_persica	Prupe.1G583800_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1
pyrus_communis	pycom08g21410 pycom520g01280
rosa_chinensis	RchiOBHm_Chr3g0484991
rosa_laevigata	RLG00000023179
rosa_multiflora	Rmu_sc0006040.1_g000024 Rmu_sc0009462.1_g000005
rosa_roxburghii	Rroxscaffold_6G00397280
rosa_rugosa	Rorug03G0214900.1 Rorug03G0215000
rosa_samantha	Rh3AG265300 Rh3CG298700 Rh3DG294600
rosa_wichuraiana	Rw0G006760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1296
AasI	GACNNNNNNGTC	1 cut(s)	1724
AatII	GACGTC	1 cut(s)	1501
Acc36I	ACCTGC	1 cut(s)	488
Acc65I	GGTACC	1 cut(s)	2227
AccB1I	GGYRCC	1 cut(s)	2227
AccB7I	CCANNNNNTGG	1 cut(s)	809
AccII	CGCG	1 cut(s)	2272
AciI	CCGC	8 cut(s)	422, 492, 850, 1407, 1904, 1932, 2031, 2312
AclWI	GGATC	3 cut(s)	314, 2008, 2088
AcsI	RAATTY	4 cut(s)	76, 1373, 1710, 2262
AcyI	GRCGYC	1 cut(s)	1498
AfaI	GTAC	3 cut(s)	928, 1363, 2229
AfiI	CCNNNNNNNGG	5 cut(s)	679, 809, 1247, 2224, 2258
AflIII	ACRYGT	1 cut(s)	761
AhdI	GACNNNNNGTC	2 cut(s)	238, 1170
AjiI	CACGTC	1 cut(s)	108
AjnI	CCWGG	1 cut(s)	1575
Alw21I	GWGCWC	3 cut(s)	279, 859, 2295
Alw26I	GTCTC	6 cut(s)	744, 1606, 1953, 2156, 2213, 2239
AlwI	GGATC	3 cut(s)	314, 2008, 2088
AlwNI	CAGNNNCTG	1 cut(s)	458
Ama87I	CYCGRG	2 cut(s)	674, 1285
AoxI	GGCC	3 cut(s)	316, 635, 1006
ApaI	GGGCCC	1 cut(s)	639
ApoI	RAATTY	4 cut(s)	76, 1373, 1710, 2262
ArsI	GACNNNNNNTTYG	2 cut(s)	2039, 2071
Asp718I	GGTACC	1 cut(s)	2227
AspA2I	CCTAGG	1 cut(s)	1033
AspLEI	GCGC	1 cut(s)	295
AspS9I	GGNCC	4 cut(s)	635, 636, 1007, 1808
AsuHPI	GGTGA	2 cut(s)	61, 1141
AvaI	CYCGRG	2 cut(s)	674, 1285
AvaII	GGWCC	1 cut(s)	1808
AvrII	CCTAGG	1 cut(s)	1033
AxyI	CCTNAGG	1 cut(s)	513
BaeGI	GKGCMC	3 cut(s)	639, 802, 1878
BanI	GGYRCC	1 cut(s)	2227
BanII	GRGCYC	3 cut(s)	639, 689, 1461
BarI	GAAGNNNNNNTAC	2 cut(s)	2001, 2033
BauI	CACGAG	1 cut(s)	1076
Bbv12I	GWGCWC	3 cut(s)	279, 859, 2295
BccI	CCATC	5 cut(s)	53, 86, 191, 443, 2133
BcgI	CGANNNNNNTGC	2 cut(s)	1103, 1137
BciT130I	CCWGG	1 cut(s)	1577
BclI	TGATCA	1 cut(s)	966
BcoDI	GTCTC	6 cut(s)	744, 1606, 1953, 2156, 2213, 2239
BfaI	CTAG	5 cut(s)	449, 1019, 1034, 1535, 1559
BfmI	CTRYAG	2 cut(s)	459, 930
BfuAI	ACCTGC	1 cut(s)	488
BglI	GCCNNNNNGGC	2 cut(s)	324, 1287
BlnI	CCTAGG	1 cut(s)	1033
Bme1390I	CCNGG	1 cut(s)	1577
Bme18I	GGWCC	1 cut(s)	1808
BmeRI	GACNNNNNGTC	2 cut(s)	238, 1170
BmeT110I	CYCGRG	2 cut(s)	674, 1285
BmgBI	CACGTC	1 cut(s)	108
BmgT120I	GGNCC	4 cut(s)	635, 636, 1007, 1808
BmiI	GGNNCC	6 cut(s)	169, 502, 592, 637, 1009, 2229
BmrFI	CCNGG	1 cut(s)	1577
BmrI	ACTGGG	1 cut(s)	797
BmsI	GCATC	6 cut(s)	532, 1113, 1324, 1846, 1906, 2150
BmuI	ACTGGG	1 cut(s)	797
BoxI	GACNNNNGTC	1 cut(s)	1542
BpmI	CTGGAG	3 cut(s)	256, 1503, 1905
BpuEI	CTTGAG	3 cut(s)	263, 848, 1952
Bsa29I	ATCGAT	1 cut(s)	2106
BsaBI	GATNNNNATC	1 cut(s)	2124
BsaHI	GRCGYC	1 cut(s)	1498
BsaI	GGTCTC	3 cut(s)	1953, 2213, 2239
BsaJI	CCNNGG	8 cut(s)	639, 673, 1033, 1190, 1284, 1420, 1576, 2239
BsaXI	ACNNNNNCTCC	2 cut(s)	1292, 1322
Bsc4I	CCNNNNNNNGG	5 cut(s)	679, 809, 1247, 2224, 2258
Bse118I	RCCGGY	1 cut(s)	989
Bse1I	ACTGG	5 cut(s)	239, 319, 803, 1359, 1810
Bse21I	CCTNAGG	1 cut(s)	513
Bse3DI	GCAATG	2 cut(s)	1152, 1440
Bse8I	GATNNNNATC	1 cut(s)	2124
BseBI	CCWGG	1 cut(s)	1577
BseCI	ATCGAT	1 cut(s)	2106
BseDI	CCNNGG	8 cut(s)	639, 673, 1033, 1190, 1284, 1420, 1576, 2239
BseGI	GGATG	3 cut(s)	97, 1861, 2125
BseJI	GATNNNNATC	1 cut(s)	2124
BseLI	CCNNNNNNNGG	5 cut(s)	679, 809, 1247, 2224, 2258
BseMI	GCAATG	2 cut(s)	1152, 1440
BseMII	CTCAG	3 cut(s)	164, 504, 2224
BseNI	ACTGG	5 cut(s)	239, 319, 803, 1359, 1810
BseRI	GAGGAG	3 cut(s)	115, 845, 2114
BseSI	GKGCMC	3 cut(s)	639, 802, 1878
BsgI	GTGCAG	2 cut(s)	130, 1005
Bsh1236I	CGCG	1 cut(s)	2272
Bsh1285I	CGRYCG	1 cut(s)	745
BshFI	GGCC	3 cut(s)	318, 637, 1008
BshNI	GGYRCC	1 cut(s)	2227
BshVI	ATCGAT	1 cut(s)	2106
BsiEI	CGRYCG	1 cut(s)	745
BsiHKAI	GWGCWC	3 cut(s)	279, 859, 2295
BsiHKCI	CYCGRG	2 cut(s)	674, 1285
BsiSI	CCGG	4 cut(s)	504, 612, 990, 2288
BslFI	GGGAC	1 cut(s)	2316
BslI	CCNNNNNNNGG	5 cut(s)	679, 809, 1247, 2224, 2258
BsmAI	GTCTC	6 cut(s)	744, 1606, 1953, 2156, 2213, 2239
BsmFI	GGGAC	1 cut(s)	2316
BsmI	GAATGC	1 cut(s)	507
BsnI	GGCC	3 cut(s)	318, 637, 1008
Bso31I	GGTCTC	3 cut(s)	1953, 2213, 2239
BsoBI	CYCGRG	2 cut(s)	674, 1285
Bsp120I	GGGCCC	1 cut(s)	635
Bsp1286I	GDGCHC	8 cut(s)	279, 639, 689, 802, 859, 1461, 1878, 2295
Bsp143I	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
Bsp19I	CCATGG	2 cut(s)	639, 1190
BspACI	CCGC	8 cut(s)	422, 492, 850, 1407, 1904, 1932, 2031, 2312
BspANI	GGCC	3 cut(s)	318, 637, 1008
BspCNI	CTCAG	3 cut(s)	163, 505, 2223
BspDI	ATCGAT	1 cut(s)	2106
BspFNI	CGCG	1 cut(s)	2272
BspLI	GGNNCC	6 cut(s)	169, 502, 592, 637, 1009, 2229
BspMAI	CTGCAG	1 cut(s)	463
BspMI	ACCTGC	1 cut(s)	488
BspPI	GGATC	3 cut(s)	314, 2008, 2088
BspQI	GCTCTTC	1 cut(s)	864
BspT107I	GGYRCC	1 cut(s)	2227
BspTNI	GGTCTC	3 cut(s)	1953, 2213, 2239
BsrDI	GCAATG	2 cut(s)	1152, 1440
BsrFI	RCCGGY	1 cut(s)	989
BsrI	ACTGG	5 cut(s)	239, 319, 803, 1359, 1810
BssAI	RCCGGY	1 cut(s)	989
BssECI	CCNNGG	8 cut(s)	639, 673, 1033, 1190, 1284, 1420, 1576, 2239
BssMI	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
BssNI	GRCGYC	1 cut(s)	1498
BssSI	CACGAG	1 cut(s)	1076
BssT1I	CCWWGG	4 cut(s)	639, 1033, 1190, 2239
Bst2BI	CACGAG	1 cut(s)	1076
Bst2UI	CCWGG	1 cut(s)	1577
Bst4CI	ACNGT	6 cut(s)	1042, 1246, 1600, 1644, 1687, 2155
Bst6I	CTCTTC	4 cut(s)	742, 864, 2004, 2091
BstACI	GRCGYC	1 cut(s)	1498
BstAPI	GCANNNNNTGC	5 cut(s)	431, 458, 797, 893, 992
BstC8I	GCNNGC	3 cut(s)	658, 1187, 1489
BstDEI	CTNAG	6 cut(s)	125, 150, 246, 513, 719, 2210
BstDSI	CCRYGG	2 cut(s)	639, 1190
BstENI	CCTNNNNNAGG	1 cut(s)	677
BstF5I	GGATG	3 cut(s)	97, 1861, 2125
BstFNI	CGCG	1 cut(s)	2272
BstHHI	GCGC	1 cut(s)	295
BstKTI	GATC	6 cut(s)	309, 969, 2016, 2083, 2106, 2122
BstMAI	GTCTC	6 cut(s)	744, 1606, 1953, 2156, 2213, 2239
BstMBI	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
BstMCI	CGRYCG	1 cut(s)	745
BstNI	CCWGG	1 cut(s)	1577
BstNSI	RCATGY	1 cut(s)	765
BstPAI	GACNNNNGTC	1 cut(s)	1542
BstSCI	CCNGG	1 cut(s)	1575
BstSFI	CTRYAG	2 cut(s)	459, 930
BstSLI	GKGCMC	3 cut(s)	639, 802, 1878
BstUI	CGCG	1 cut(s)	2272
BstX2I	RGATCY	2 cut(s)	2013, 2080
BstYI	RGATCY	2 cut(s)	2013, 2080
Bsu15I	ATCGAT	1 cut(s)	2106
Bsu36I	CCTNAGG	1 cut(s)	513
BsuRI	GGCC	3 cut(s)	318, 637, 1008
BsuTUI	ATCGAT	1 cut(s)	2106
BtgI	CCRYGG	2 cut(s)	639, 1190
BtrI	CACGTC	1 cut(s)	108
BtsCI	GGATG	3 cut(s)	97, 1861, 2125
BtsI	GCAGTG	1 cut(s)	1029
BtsIMutI	CAGTG	2 cut(s)	988, 1029
BveI	ACCTGC	1 cut(s)	488
Cac8I	GCNNGC	3 cut(s)	658, 1187, 1489
CaiI	CAGNNNCTG	1 cut(s)	458
CfoI	GCGC	1 cut(s)	295
Cfr10I	RCCGGY	1 cut(s)	989
Cfr13I	GGNCC	4 cut(s)	635, 636, 1007, 1808
ClaI	ATCGAT	1 cut(s)	2106
Csp6I	GTAC	3 cut(s)	927, 1362, 2228
CspCI	CAANNNNNGTGG	2 cut(s)	1668, 1703
CviQI	GTAC	3 cut(s)	927, 1362, 2228
DdeI	CTNAG	6 cut(s)	125, 150, 246, 513, 719, 2210
DpnI	GATC	6 cut(s)	308, 968, 2015, 2082, 2105, 2121
DpnII	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
DrdI	GACNNNNNNGTC	1 cut(s)	1724
DriI	GACNNNNNGTC	2 cut(s)	238, 1170
DseDI	GACNNNNNNGTC	1 cut(s)	1724
Eam1104I	CTCTTC	4 cut(s)	742, 864, 2004, 2091
Eam1105I	GACNNNNNGTC	2 cut(s)	238, 1170
EarI	CTCTTC	4 cut(s)	742, 864, 2004, 2091
EciI	GGCGGA	1 cut(s)	865
Eco130I	CCWWGG	4 cut(s)	639, 1033, 1190, 2239
Eco24I	GRGCYC	3 cut(s)	639, 689, 1461
Eco31I	GGTCTC	3 cut(s)	1953, 2213, 2239
Eco47I	GGWCC	1 cut(s)	1808
Eco81I	CCTNAGG	1 cut(s)	513
Eco88I	CYCGRG	2 cut(s)	674, 1285
EcoNI	CCTNNNNNAGG	1 cut(s)	677
EcoO109I	RGGNCCY	1 cut(s)	635
EcoRI	GAATTC	1 cut(s)	2262
EcoRII	CCWGG	1 cut(s)	1575
EcoT14I	CCWWGG	4 cut(s)	639, 1033, 1190, 2239
EcoT22I	ATGCAT	1 cut(s)	2143
EcoT38I	GRGCYC	3 cut(s)	639, 689, 1461
ErhI	CCWWGG	4 cut(s)	639, 1033, 1190, 2239
FaqI	GGGAC	1 cut(s)	2316
FauI	CCCGC	1 cut(s)	2319
FauNDI	CATATG	1 cut(s)	427
FbaI	TGATCA	1 cut(s)	966
FokI	GGATG	3 cut(s)	104, 1868, 2112
FriOI	GRGCYC	3 cut(s)	639, 689, 1461
FspBI	CTAG	5 cut(s)	449, 1019, 1034, 1535, 1559
GlaI	GCGC	1 cut(s)	294
GsuI	CTGGAG	3 cut(s)	256, 1503, 1905
HaeIII	GGCC	3 cut(s)	318, 637, 1008
HapII	CCGG	4 cut(s)	504, 612, 990, 2288
HhaI	GCGC	1 cut(s)	295
Hin1I	GRCGYC	1 cut(s)	1498
Hin6I	GCGC	1 cut(s)	293
HinP1I	GCGC	1 cut(s)	293
HindIII	AAGCTT	2 cut(s)	368, 522
HinfI	GANTC	4 cut(s)	363, 615, 1520, 2067
HpaII	CCGG	4 cut(s)	504, 612, 990, 2288
HphI	GGTGA	2 cut(s)	61, 1141
Hpy166II	GTNNAC	1 cut(s)	1081
Hpy188I	TCNGA	8 cut(s)	153, 397, 966, 1424, 1915, 2199, 2213, 2261
Hpy8I	GTNNAC	1 cut(s)	1081
Hpy99I	CGWCG	1 cut(s)	2261
HpyAV	CCTTC	7 cut(s)	90, 244, 626, 950, 1461, 1582, 1831
HpyCH4III	ACNGT	6 cut(s)	1042, 1246, 1600, 1644, 1687, 2155
HpyCH4IV	ACGT	3 cut(s)	107, 998, 1498
HpyF3I	CTNAG	6 cut(s)	125, 150, 246, 513, 719, 2210
HpySE526I	ACGT	3 cut(s)	107, 998, 1498
Hsp92I	GRCGYC	1 cut(s)	1498
HspAI	GCGC	1 cut(s)	293
KpnI	GGTACC	1 cut(s)	2231
Ksp22I	TGATCA	1 cut(s)	966
Kzo9I	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
LguI	GCTCTTC	1 cut(s)	864
LmnI	GCTCC	8 cut(s)	185, 490, 565, 1132, 1484, 1562, 1924, 2290
LweI	GCATC	6 cut(s)	532, 1113, 1324, 1846, 1906, 2150
MaeI	CTAG	5 cut(s)	449, 1019, 1034, 1535, 1559
MaeII	ACGT	3 cut(s)	107, 998, 1498
MaeIII	GTNAC	7 cut(s)	53, 310, 757, 1259, 1786, 1816, 2169
MalI	GATC	6 cut(s)	308, 968, 2015, 2082, 2105, 2121
MboI	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
MboII	GAAGA	9 cut(s)	23, 148, 322, 759, 851, 1390, 2021, 2105, 2108
MfeI	CAATTG	2 cut(s)	1276, 1781
MflI	RGATCY	2 cut(s)	2013, 2080
MhlI	GDGCHC	8 cut(s)	279, 639, 689, 802, 859, 1461, 1878, 2295
MmeI	TCCRAC	3 cut(s)	69, 1024, 2239
Mph1103I	ATGCAT	1 cut(s)	2143
MseI	TTAA	3 cut(s)	519, 704, 1943
MslI	CAYNNNNRTG	1 cut(s)	651
MspA1I	CMGCKG	2 cut(s)	458, 1793
MspI	CCGG	4 cut(s)	504, 612, 990, 2288
MspR9I	CCNGG	1 cut(s)	1577
MunI	CAATTG	2 cut(s)	1276, 1781
Mva1269I	GAATGC	1 cut(s)	507
MvaI	CCWGG	1 cut(s)	1577
MvnI	CGCG	1 cut(s)	2272
NcoI	CCATGG	2 cut(s)	639, 1190
NdeI	CATATG	1 cut(s)	427
NdeII	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
NlaIV	GGNNCC	6 cut(s)	169, 502, 592, 637, 1009, 2229
NmuCI	GTSAC	4 cut(s)	53, 757, 1786, 2169
NsiI	ATGCAT	1 cut(s)	2143
NspI	RCATGY	1 cut(s)	765
PciI	ACATGT	1 cut(s)	761
PciSI	GCTCTTC	1 cut(s)	864
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	507
PfeI	GAWTC	4 cut(s)	363, 615, 1520, 2067
PflFI	GACNNNGTC	3 cut(s)	755, 1085, 2167
PflMI	CCANNNNNTGG	1 cut(s)	809
PscI	ACATGT	1 cut(s)	761
PshAI	GACNNNNGTC	1 cut(s)	1542
PsiI	TTATAA	1 cut(s)	1296
Psp6I	CCWGG	1 cut(s)	1575
PspGI	CCWGG	1 cut(s)	1575
PspN4I	GGNNCC	6 cut(s)	169, 502, 592, 637, 1009, 2229
PspOMI	GGGCCC	1 cut(s)	635
PspPI	GGNCC	4 cut(s)	635, 636, 1007, 1808
PstI	CTGCAG	1 cut(s)	463
PstNI	CAGNNNCTG	1 cut(s)	458
PsuI	RGATCY	2 cut(s)	2013, 2080
PsyI	GACNNNGTC	3 cut(s)	755, 1085, 2167
PvuII	CAGCTG	2 cut(s)	458, 1793
RsaI	GTAC	3 cut(s)	928, 1363, 2229
RsaNI	GTAC	3 cut(s)	927, 1362, 2228
RseI	CAYNNNNRTG	1 cut(s)	651
SapI	GCTCTTC	1 cut(s)	864
SaqAI	TTAA	3 cut(s)	519, 704, 1943
Sau3AI	GATC	6 cut(s)	306, 966, 2013, 2080, 2103, 2119
Sau96I	GGNCC	4 cut(s)	635, 636, 1007, 1808
ScrFI	CCNGG	1 cut(s)	1577
SduI	GDGCHC	8 cut(s)	279, 639, 689, 802, 859, 1461, 1878, 2295
SfaNI	GCATC	6 cut(s)	532, 1113, 1324, 1846, 1906, 2150
SfcI	CTRYAG	2 cut(s)	459, 930
SinI	GGWCC	1 cut(s)	1808
SmiMI	CAYNNNNRTG	1 cut(s)	651
SmlI	CTYRAG	3 cut(s)	278, 827, 1967
SmoI	CTYRAG	3 cut(s)	278, 827, 1967
SsiI	CCGC	8 cut(s)	422, 492, 850, 1407, 1904, 1932, 2031, 2312
SspI	AATATT	4 cut(s)	222, 340, 407, 923
SspMI	CTAG	5 cut(s)	449, 1019, 1034, 1535, 1559
StyD4I	CCNGG	1 cut(s)	1575
StyI	CCWWGG	4 cut(s)	639, 1033, 1190, 2239
TaaI	ACNGT	6 cut(s)	1042, 1246, 1600, 1644, 1687, 2155
TaiI	ACGT	3 cut(s)	110, 1001, 1501
TaqI	TCGA	4 cut(s)	72, 186, 540, 2106
TaqII	GACCGA	2 cut(s)	759, 2195
TatI	WGTACW	2 cut(s)	926, 1361
TauI	GCSGC	4 cut(s)	425, 494, 1409, 2033
TfiI	GAWTC	4 cut(s)	363, 615, 1520, 2067
Tru1I	TTAA	3 cut(s)	519, 704, 1943
Tru9I	TTAA	3 cut(s)	519, 704, 1943
TscAI	CASTG	2 cut(s)	988, 1029
TseFI	GTSAC	4 cut(s)	53, 757, 1786, 2169
Tsp45I	GTSAC	4 cut(s)	53, 757, 1786, 2169
TspDTI	ATGAA	7 cut(s)	20, 24, 231, 635, 1384, 1914, 2272
TspGWI	ACGGA	1 cut(s)	2035
TspRI	CASTG	2 cut(s)	988, 1029
Tth111I	GACNNNGTC	3 cut(s)	755, 1085, 2167
Van91I	CCANNNNNTGG	1 cut(s)	809
VpaK11BI	GGWCC	1 cut(s)	1808
XagI	CCTNNNNNAGG	1 cut(s)	677
XapI	RAATTY	4 cut(s)	76, 1373, 1710, 2262
XbaI	TCTAGA	1 cut(s)	1534
XceI	RCATGY	1 cut(s)	765
XmaJI	CCTAGG	1 cut(s)	1033
XspI	CTAG	5 cut(s)	449, 1019, 1034, 1535, 1559
ZraI	GACGTC	1 cut(s)	1499
Zsp2I	ATGCAT	1 cut(s)	2143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.