Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006543

Physical Location & Seq

Genomic Coordinates Reverse (-)

19455422 .. 19459541

Gene Structure 4120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0215000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGCTTCACAGATCCGCCATGGAACACCCTAACCTTGTTATACCCTTCCTTCTTCTCCTTTCCCTCCTTTCAGTGGCTTTCAGCGCCACAGACCCTAATGACCTGGCCATTCTCAACCAGTTCAAGAAGAACATGGAGAATTCCGAGCTCCTGAACTGGCCTGAAAATGGCGACGACCCTTGTGGCCCTCCAAAGTGGGACCATGTGTTCTGTTCTGCTGATAGGGTTTCCCAGATTCAGGTTCAGGAGCTGGGCTTGAAGGGTCCTCTGCCCCAGAACCTGAACCAGCTCTCTGAGCTCTCCAACATAGGCCTCCAGAGGAACCAGTTCAGTGGGCCTTTGCCTACTCTCAAAGGCTTGTCCAAATTGAAGTATGCTTTTCTTGATTACAACGATTTCAGTTCTATTCCCGGTGATTTTTTCGACGGCCTTGATTCTCTGGAGGTTCTGGCATTGGATGGCTTGGATTTGAATGCCACTACAGGGTGGACATTCCCTCCACAGTTACTGAATTCGGCGCAGCTGCAGAACCTGACCTGTGGGAGTTGCAATCTGGTTGGTCCGTTGCCGGATTTTCTCGGCAACCTTTCGTCGCTAACTGTGTTAGAGCTTTCAGGGAATGGTTTGACTGGCGAAATTCCCAAGAGTTTTACTGGCCTTAACTTGCAGAGTCTCCAGTTGAACAATCCGAAAGGCGGGGGAATGAGTGGTCCTATTGATGTGATCACAACAATGGCGCAGCTCAACTTGGCTTGGCTTCATGGGAATCAGTTCACAGGTACTATCCCCGACAGCATTGGTAATTTGGTTTCTTTGAAGGATCTTAATCTGAATCAAAACCAACTTGGTGGTCTGGTTCCTGATAGTTTGGCTAATCTGGAACTTGATGCATTGAATTTGAACAATAACCATTTCATGGGTCCAGTACCAGAGTTTAAGGCAAAGAATGTGAGTTATGATTCAAATGCATTCTGTTTACCAACTCCGGGGCTTCCTTGTGCGCCGGAGGTTATGGCGCTTATAGGGTTTCTTCAGGGGTTGGATTTCCCTACAACACTTGCTTCTAAGTGGTCTGGTAATGATCCTTGCAAAGAGTCATGGTTGGGAGTGAGTTGCGGCAACAATGGGAAGGTGTCTGTTATAAATCTGCCCAAGTATAATCTCAATGGTACGTTGAGTCCTTCAGTTGCTAAGTTAGCTTCTCTTGTTCAGATTAAGCTTCAGAATAACCATTTGACGGGTCCAATTCCTGCCAAGTGGACTAGCTTGAAGGCCCTGACAATGCTGGATCTAACTGGGAATGATATTAGCCCTCCATTGCCAAAATTTGTCAACACCGTTAAAGTGGTCATTGATGGGAATCCTTTGTTTCATGGCAATCCGTCTGAGCAAGGCCCAGCACCAGAGAATAATTCTTCATCAACGACCAACCCATCTTCCCCAACAGACACAAGTTCTAATGGGAATGGTACTTCTCAATCAAAAGGATCAAAAGGGACCAACATAGTTTCAATTGTTGCTCCTGTTACAAGTGTTGCTGTTGTTGCTTTGCTTGTAATTCCTTTATCCATCTACTATTGTAAGAAGAGAAGAACTCGCTTCCAGGCTCCAAGTTCCCTTGTAGTTCATCCAAGAGATCCATCTGATTCAGATAACAGGGTTAAGATTGTCGTTGCCGCTAATACCACTGGAAGCACTTCTACCCTTACGGGGAGCGGTTCTGCAAGCAGAAACAGCAGTGGGATAGGTGAGTCTCATGTCATTGAAGCTGGAAATCTCGTCATATCAGTTCAAGTTCTTCGGAATGTGACAAAGAATTTTGCCGCTGAAAATGAGCTTGGTCGTGGTGGTTTTGGGGTTGTTTATAAGGGAGAATTGGATGATGGGACAAAAATAGCAGTGAAAAGAATGGAGGCAGGTGTGATTAGCAACAAAGCCTTGGATGAATTCCAGTCCGAAATTGCAGTTCTTTCAAAGGTCCGACACCGTCATTTGGTATCACTGTTGGGTTATTCTGTTGCAGGAAATGAGAGAATGCTTGTGTATGAATATATGCCTCAAGGGGCTCTGAGCAGGCATCTTTTTCATTGGAAAACCTTTAAACTAGAACCTCTCTCTTGGATGAGGAGGCTAAATATTGCCTTGGACGTCGCTAGGGGGCTGGAGTATCTTCATAATCTTGCACACCAAAGCTTCATACACAGAGACCTCAAGTCATCAAACATCTTACTTGGTGATGATTTTAAAGCAAAAATATCAGATTTTGGATTGGTGAAACTGGCTCCTGATGGTGAAAAATCTGTTGTGACCAGGCTTGCTGGAACGTTTGGTTACTTAGCACCAGAGTATGCTGTGACAGGAAAAATTACAACCAAAGTAGATGTATTCAGTTTTGGGGTTGTGCTAATGGAGCTATTAACTGGAATGATGGCGCTGGATGATGATAGGCCTGAAGAAAGCCAGTACTTGGCTGCATGGTTCTGGCACATCAAATCAAATAAGGAGAAACTGTTGGCAGCCATTGACCCAACCCTTGATATAAAAGACATGAAAGAAGAAACATTTGAGAGCATCGCCACAATTGCGGAACTAGCTGGGCACTGCACTGCAAGGGAACCCAGCCAAAGACCAGATATGGGTCATGCTGTGAATGTATTGTCCCCACTGGTTGAAAAATGGAAACCATTTAATGATGAGGATGATGAATATTCTGGCATAGACTACAGCCTCCCGCTTAACCAGATGGTGAAAGGTTGGCAGGAAGCAGAAGGAAAGGATTCCAGTTACATGGACCTAGAAGACAGCAAGAGCAGTATACCAGCACGGCCAACTGGGTTTGCAGACTCTTTTACTTCGGCTGATGGTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005247 GO:0005253 GO:0005254 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0008150 GO:0008308 GO:0008509 GO:0009705 GO:0015075 GO:0015103 GO:0015108 GO:0015267 GO:0015318 GO:0015698 GO:0016020 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098656 GO:0098660 GO:0098661 GO:0098805 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

956

Amino Acids

103.49

Weight (kDa)

5.44

Isoelectric Point (pI)

33.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 72	3.6e-06	Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr	PF07714	609 - 884	3.1e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	609 - 883	1.3e-45	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49890
fragaria_vesca	FvH4_1g25850 FvH4_1g25850
malus_domestica	MD00G1030600.v1.1
prunus_persica	Prupe.1G583800_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1
pyrus_communis	pycom08g21410 pycom520g01280
rosa_chinensis	RchiOBHm_Chr3g0484991
rosa_laevigata	RLG00000023179
rosa_multiflora	Rmu_sc0006040.1_g000024 Rmu_sc0009462.1_g000005
rosa_roxburghii	Rroxscaffold_6G00397280
rosa_rugosa	Rorug03G0214900.1 Rorug03G0215000
rosa_samantha	Rh3AG265300 Rh3CG298700 Rh3DG294600
rosa_wichuraiana	Rw0G006760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1142, 1866
AarI	CACCTGC	1 cut(s)	1907
AatII	GACGTC	1 cut(s)	2151
Acc36I	ACCTGC	1 cut(s)	1907
AccB7I	CCANNNNNTGG	2 cut(s)	916, 2467
AccBSI	CCGCTC	1 cut(s)	1716
AccI	GTMKAC	1 cut(s)	2815
AciI	CCGC	8 cut(s)	15, 696, 1116, 1677, 1716, 1824, 2585, 2732
AclI	AACGTT	1 cut(s)	2324
AclWI	GGATC	6 cut(s)	6, 828, 1076, 1296, 1495, 1631
AcoI	YGGCCR	2 cut(s)	105, 2825
AcsI	RAATTY	7 cut(s)	139, 511, 636, 895, 1325, 1816, 1946
AcuI	CTGAAG	4 cut(s)	1016, 1167, 1205, 2472
AcyI	GRCGYC	1 cut(s)	2148
AfaI	GTAC	5 cut(s)	781, 927, 1171, 1471, 2465
AhdI	GACNNNNNGTC	1 cut(s)	2212
AjnI	CCWGG	3 cut(s)	102, 1602, 2309
AjuI	GAANNNNNNNTTGG	2 cut(s)	1821, 1853
AloI	GAACNNNNNNTCC	2 cut(s)	191, 223
Alw21I	GWGCWC	2 cut(s)	150, 300
Alw26I	GTCTC	3 cut(s)	677, 1758, 2199
AlwI	GGATC	6 cut(s)	6, 828, 1076, 1296, 1495, 1631
AlwNI	CAGNNNCTG	4 cut(s)	250, 280, 508, 532
ApeKI	GCWGC	5 cut(s)	520, 523, 739, 2471, 2516
ApoI	RAATTY	7 cut(s)	139, 511, 636, 895, 1325, 1816, 1946
Asp700I	GAANNNNTTC	4 cut(s)	326, 770, 1696, 2776
AspLEI	GCGC	6 cut(s)	86, 520, 739, 1003, 1018, 2434
AsuC2I	CCSGG	2 cut(s)	411, 987
AsuHPI	GGTGA	6 cut(s)	425, 1760, 2246, 2284, 2303, 2758
AvaII	GGWCC	9 cut(s)	199, 263, 560, 710, 920, 1241, 1497, 1978, 2791
BaeGI	GKGCMC	1 cut(s)	2601
BalI	TGGCCA	1 cut(s)	107
BanII	GRGCYC	3 cut(s)	150, 300, 2068
BarI	GAAGNNNNNNTAC	2 cut(s)	1684, 1716
BbsI	GAAGAC	1 cut(s)	2805
Bbv12I	GWGCWC	2 cut(s)	150, 300
BbvI	GCAGC	5 cut(s)	510, 532, 751, 2458, 2528
BceAI	ACGGC	2 cut(s)	442, 2840
BciT130I	CCWGG	3 cut(s)	104, 1604, 2311
BclI	TGATCA	1 cut(s)	723
BcnI	CCSGG	2 cut(s)	411, 987
BcoDI	GTCTC	3 cut(s)	677, 1758, 2199
BfaI	CTAG	5 cut(s)	1263, 2105, 2154, 2591, 2795
BfmI	CTRYAG	3 cut(s)	480, 524, 2722
BfoI	RGCGCY	3 cut(s)	87, 1019, 2435
BfuAI	ACCTGC	1 cut(s)	1907
BisI	GCNGC	8 cut(s)	521, 524, 740, 1117, 1677, 1824, 2472, 2517
BlsI	GCNGC	8 cut(s)	522, 525, 741, 1118, 1678, 1825, 2473, 2518
BmcAI	AGTACT	1 cut(s)	2465
Bme1390I	CCNGG	5 cut(s)	104, 411, 987, 1604, 2311
Bme18I	GGWCC	9 cut(s)	199, 263, 560, 710, 920, 1241, 1497, 1978, 2791
BmeRI	GACNNNNNGTC	1 cut(s)	2212
BmrFI	CCNGG	5 cut(s)	104, 411, 987, 1604, 2311
BmrI	ACTGGG	2 cut(s)	1305, 2841
BmsI	GCATC	3 cut(s)	877, 2086, 2580
BmuI	ACTGGG	2 cut(s)	1305, 2841
BpiI	GAAGAC	1 cut(s)	2805
BplI	GAGNNNNNCTC	2 cut(s)	1579, 1611
BpmI	CTGGAG	4 cut(s)	299, 461, 659, 2183
BpuEI	CTTGAG	2 cut(s)	2043, 2195
BpuMI	CCSGG	2 cut(s)	411, 987
BsaBI	GATNNNNATC	2 cut(s)	825, 1359
BsaHI	GRCGYC	1 cut(s)	2148
BsaI	GGTCTC	1 cut(s)	2199
BsaJI	CCNNGG	4 cut(s)	18, 986, 1938, 2142
BsaXI	ACNNNNNCTCC	4 cut(s)	481, 511, 2495, 2525
Bse3DI	GCAATG	1 cut(s)	1316
Bse8I	GATNNNNATC	2 cut(s)	825, 1359
BseBI	CCWGG	3 cut(s)	104, 1604, 2311
BseDI	CCNNGG	4 cut(s)	18, 986, 1938, 2142
BseGI	GGATG	7 cut(s)	463, 1627, 1885, 1948, 2127, 2443, 2704
BseJI	GATNNNNATC	2 cut(s)	825, 1359
BseMI	GCAATG	1 cut(s)	1316
BseMII	CTCAG	3 cut(s)	285, 1377, 2060
BseRI	GAGGAG	1 cut(s)	2140
BseSI	GKGCMC	1 cut(s)	2601
BseXI	GCAGC	5 cut(s)	510, 532, 751, 2458, 2528
BseYI	CCCAGC	4 cut(s)	250, 1396, 2594, 2618
BsgI	GTGCAG	1 cut(s)	2587
BsiHKAI	GWGCWC	2 cut(s)	150, 300
BsiSI	CCGG	4 cut(s)	411, 569, 986, 1004
BslFI	GGGAC	4 cut(s)	212, 1510, 1900, 2644
BsmAI	GTCTC	3 cut(s)	677, 1758, 2199
BsmFI	GGGAC	4 cut(s)	212, 1510, 1900, 2644
BsmI	GAATGC	3 cut(s)	478, 968, 2040
Bso31I	GGTCTC	1 cut(s)	2199
Bsp1286I	GDGCHC	4 cut(s)	150, 300, 2068, 2601
Bsp143I	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	8 cut(s)	15, 696, 1116, 1677, 1716, 1824, 2585, 2732
BspCNI	CTCAG	3 cut(s)	286, 1378, 2061
BspMAI	CTGCAG	1 cut(s)	528
BspMI	ACCTGC	1 cut(s)	1907
BspPI	GGATC	6 cut(s)	6, 828, 1076, 1296, 1495, 1631
BspTNI	GGTCTC	1 cut(s)	2199
BsrBI	CCGCTC	1 cut(s)	1716
BsrDI	GCAATG	1 cut(s)	1316
BssECI	CCNNGG	4 cut(s)	18, 986, 1938, 2142
BssMI	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
BssNAI	GTATAC	1 cut(s)	2816
BssNI	GRCGYC	1 cut(s)	2148
BssT1I	CCWWGG	3 cut(s)	18, 1938, 2142
Bst1107I	GTATAC	1 cut(s)	2816
Bst2UI	CCWGG	3 cut(s)	104, 1604, 2311
Bst4CI	ACNGT	6 cut(s)	504, 601, 1339, 1988, 2004, 2511
Bst6I	CTCTTC	1 cut(s)	1580
BstACI	GRCGYC	1 cut(s)	2148
BstC8I	GCNNGC	3 cut(s)	1726, 2075, 2316
BstDEI	CTNAG	6 cut(s)	294, 1065, 1191, 1386, 2069, 2335
BstDSI	CCRYGG	1 cut(s)	18
BstF5I	GGATG	7 cut(s)	463, 1627, 1885, 1948, 2127, 2443, 2704
BstH2I	RGCGCY	3 cut(s)	87, 1019, 2435
BstHHI	GCGC	6 cut(s)	86, 520, 739, 1003, 1018, 2434
BstKTI	GATC	7 cut(s)	14, 726, 823, 1084, 1291, 1490, 1639
BstMAI	GTCTC	3 cut(s)	677, 1758, 2199
BstMBI	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 295, 1196, 1544, 1734, 2410, 2582, 2591
BstNI	CCWGG	3 cut(s)	104, 1604, 2311
BstSCI	CCNGG	5 cut(s)	102, 409, 985, 1602, 2309
BstSFI	CTRYAG	3 cut(s)	480, 524, 2722
BstSLI	GKGCMC	1 cut(s)	2601
BstV1I	GCAGC	5 cut(s)	510, 532, 751, 2458, 2528
BstV2I	GAAGAC	1 cut(s)	2805
BstX2I	RGATCY	4 cut(s)	11, 820, 1288, 1636
BstXI	CCANNNNNNTGG	3 cut(s)	332, 848, 2788
BstYI	RGATCY	4 cut(s)	11, 820, 1288, 1636
BstZ17I	GTATAC	1 cut(s)	2816
BtgI	CCRYGG	1 cut(s)	18
BtgZI	GCGATG	1 cut(s)	2557
BtsCI	GGATG	7 cut(s)	463, 1627, 1885, 1948, 2127, 2443, 2704
BtsI	GCAGTG	4 cut(s)	1744, 1905, 2599, 2604
BtsIMutI	CAGTG	9 cut(s)	78, 337, 1686, 1744, 1905, 2000, 2599, 2604, 2663
BveI	ACCTGC	1 cut(s)	1907
Cac8I	GCNNGC	3 cut(s)	1726, 2075, 2316
CaiI	CAGNNNCTG	4 cut(s)	250, 280, 508, 532
CfoI	GCGC	6 cut(s)	86, 520, 739, 1003, 1018, 2434
Csp6I	GTAC	5 cut(s)	780, 926, 1170, 1470, 2464
CviQI	GTAC	5 cut(s)	780, 926, 1170, 1470, 2464
DdeI	CTNAG	6 cut(s)	294, 1065, 1191, 1386, 2069, 2335
DpnI	GATC	7 cut(s)	13, 725, 822, 1083, 1290, 1489, 1638
DpnII	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
DraI	TTTAAA	2 cut(s)	2101, 2245
DriI	GACNNNNNGTC	1 cut(s)	2212
EaeI	YGGCCR	2 cut(s)	105, 2825
Eam1104I	CTCTTC	1 cut(s)	1580
Eam1105I	GACNNNNNGTC	1 cut(s)	2212
EarI	CTCTTC	1 cut(s)	1580
EciI	GGCGGA	1 cut(s)	4
Ecl136II	GAGCTC	2 cut(s)	148, 298
Eco130I	CCWWGG	3 cut(s)	18, 1938, 2142
Eco147I	AGGCCT	2 cut(s)	312, 2449
Eco24I	GRGCYC	3 cut(s)	150, 300, 2068
Eco31I	GGTCTC	1 cut(s)	2199
Eco47I	GGWCC	9 cut(s)	199, 263, 560, 710, 920, 1241, 1497, 1978, 2791
Eco53kI	GAGCTC	2 cut(s)	148, 298
Eco57I	CTGAAG	4 cut(s)	1016, 1167, 1205, 2472
EcoICRI	GAGCTC	2 cut(s)	148, 298
EcoO109I	RGGNCCY	2 cut(s)	263, 1273
EcoRI	GAATTC	3 cut(s)	139, 511, 1946
EcoRII	CCWGG	3 cut(s)	102, 1602, 2309
EcoT14I	CCWWGG	3 cut(s)	18, 1938, 2142
EcoT22I	ATGCAT	2 cut(s)	892, 970
EcoT38I	GRGCYC	3 cut(s)	150, 300, 2068
ErhI	CCWWGG	3 cut(s)	18, 1938, 2142
FaqI	GGGAC	4 cut(s)	212, 1510, 1900, 2644
FauI	CCCGC	2 cut(s)	689, 2739
FbaI	TGATCA	1 cut(s)	723
FblI	GTMKAC	1 cut(s)	2815
Fnu4HI	GCNGC	8 cut(s)	521, 524, 740, 1117, 1677, 1824, 2472, 2517
FokI	GGATG	7 cut(s)	470, 1614, 1892, 1955, 2134, 2450, 2711
FriOI	GRGCYC	3 cut(s)	150, 300, 2068
Fsp4HI	GCNGC	8 cut(s)	521, 524, 740, 1117, 1677, 1824, 2472, 2517
FspBI	CTAG	5 cut(s)	1263, 2105, 2154, 2591, 2795
GlaI	GCGC	6 cut(s)	85, 519, 738, 1002, 1017, 2433
GluI	GCNGC	8 cut(s)	521, 524, 740, 1117, 1677, 1824, 2472, 2517
GsaI	CCCAGC	4 cut(s)	254, 1400, 2598, 2622
GsuI	CTGGAG	4 cut(s)	299, 461, 659, 2183
HaeII	RGCGCY	3 cut(s)	87, 1019, 2435
HapII	CCGG	4 cut(s)	411, 569, 986, 1004
HhaI	GCGC	6 cut(s)	86, 520, 739, 1003, 1018, 2434
Hin1I	GRCGYC	1 cut(s)	2148
Hin6I	GCGC	6 cut(s)	84, 518, 737, 1001, 1016, 2432
HinP1I	GCGC	6 cut(s)	84, 518, 737, 1001, 1016, 2432
HincII	GTYRAC	1 cut(s)	1333
HindII	GTYRAC	1 cut(s)	1333
HindIII	AAGCTT	2 cut(s)	1217, 2191
HpaII	CCGG	4 cut(s)	411, 569, 986, 1004
HphI	GGTGA	6 cut(s)	425, 1760, 2246, 2284, 2303, 2758
Hpy166II	GTNNAC	6 cut(s)	489, 774, 977, 1260, 1333, 2816
Hpy188III	TCNNGA	9 cut(s)	124, 151, 245, 316, 383, 440, 860, 878, 2285
Hpy8I	GTNNAC	6 cut(s)	489, 774, 977, 1260, 1333, 2816
Hpy99I	CGWCG	4 cut(s)	176, 428, 595, 2153
HpyAV	CCTTC	8 cut(s)	55, 59, 253, 811, 1123, 1191, 1264, 2762
HpyCH4III	ACNGT	6 cut(s)	504, 601, 1339, 1988, 2004, 2511
HpyCH4IV	ACGT	3 cut(s)	1172, 2148, 2324
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 295, 1196, 1544, 1734, 2410, 2582, 2591
HpyF3I	CTNAG	6 cut(s)	294, 1065, 1191, 1386, 2069, 2335
HpySE526I	ACGT	3 cut(s)	1172, 2148, 2324
Hsp92I	GRCGYC	1 cut(s)	2148
HspAI	GCGC	6 cut(s)	84, 518, 737, 1001, 1016, 2432
Ksp22I	TGATCA	1 cut(s)	723
Kzo9I	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
LmnI	GCTCC	7 cut(s)	153, 247, 1525, 1612, 1713, 2287, 2410
Lsp1109I	GCAGC	5 cut(s)	510, 532, 751, 2458, 2528
LweI	GCATC	3 cut(s)	877, 2086, 2580
MaeI	CTAG	5 cut(s)	1263, 2105, 2154, 2591, 2795
MaeII	ACGT	3 cut(s)	1172, 2148, 2324
MaeIII	GTNAC	7 cut(s)	504, 1525, 1807, 2305, 2330, 2353, 2783
MalI	GATC	7 cut(s)	13, 725, 822, 1083, 1290, 1489, 1638
MbiI	CCGCTC	1 cut(s)	1716
MboI	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
MfeI	CAATTG	2 cut(s)	1512, 2580
MflI	RGATCY	4 cut(s)	11, 820, 1288, 1636
MhlI	GDGCHC	4 cut(s)	150, 300, 2068, 2601
MlsI	TGGCCA	1 cut(s)	107
MluNI	TGGCCA	1 cut(s)	107
MlyI	GAGTC	5 cut(s)	679, 1103, 1186, 1760, 2837
MmeI	TCCRAC	3 cut(s)	327, 1020, 2005
Mox20I	TGGCCA	1 cut(s)	107
Mph1103I	ATGCAT	2 cut(s)	892, 970
MroXI	GAANNNNTTC	4 cut(s)	326, 770, 1696, 2776
MscI	TGGCCA	1 cut(s)	107
MslI	CAYNNNNRTG	1 cut(s)	731
Msp20I	TGGCCA	1 cut(s)	107
MspA1I	CMGCKG	2 cut(s)	523, 1826
MspI	CCGG	4 cut(s)	411, 569, 986, 1004
MspR9I	CCNGG	5 cut(s)	104, 411, 987, 1604, 2311
MunI	CAATTG	2 cut(s)	1512, 2580
Mva1269I	GAATGC	3 cut(s)	478, 968, 2040
MvaI	CCWGG	3 cut(s)	104, 1604, 2311
MwoI	GCNNNNNNNGC	8 cut(s)	83, 295, 1196, 1544, 1734, 2410, 2582, 2591
NciI	CCSGG	2 cut(s)	411, 987
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
NmeAIII	GCCGAG	1 cut(s)	558
NmuCI	GTSAC	3 cut(s)	1807, 2305, 2353
NsiI	ATGCAT	2 cut(s)	892, 970
PaqCI	CACCTGC	1 cut(s)	1907
PceI	AGGCCT	2 cut(s)	312, 2449
PctI	GAATGC	3 cut(s)	478, 968, 2040
PdmI	GAANNNNTTC	4 cut(s)	326, 770, 1696, 2776
PfeI	GAWTC	8 cut(s)	235, 434, 766, 832, 959, 1360, 1646, 2777
PflFI	GACNNNGTC	1 cut(s)	1986
PflMI	CCANNNNNTGG	2 cut(s)	916, 2467
PkrI	GCNGC	8 cut(s)	522, 525, 741, 1118, 1678, 1825, 2473, 2518
PleI	GAGTC	5 cut(s)	678, 1102, 1185, 1759, 2837
PpsI	GAGTC	5 cut(s)	678, 1102, 1185, 1759, 2837
PpuMI	RGGWCCY	1 cut(s)	263
PsiI	TTATAA	2 cut(s)	1142, 1866
Psp124BI	GAGCTC	2 cut(s)	150, 300
Psp1406I	AACGTT	1 cut(s)	2324
Psp5II	RGGWCCY	1 cut(s)	263
Psp6I	CCWGG	3 cut(s)	102, 1602, 2309
PspFI	CCCAGC	4 cut(s)	250, 1396, 2594, 2618
PspGI	CCWGG	3 cut(s)	102, 1602, 2309
PspPPI	RGGWCCY	1 cut(s)	263
PstI	CTGCAG	1 cut(s)	528
PstNI	CAGNNNCTG	4 cut(s)	250, 280, 508, 532
PsuI	RGATCY	4 cut(s)	11, 820, 1288, 1636
PsyI	GACNNNGTC	1 cut(s)	1986
PvuII	CAGCTG	1 cut(s)	523
RsaI	GTAC	5 cut(s)	781, 927, 1171, 1471, 2465
RsaNI	GTAC	5 cut(s)	780, 926, 1170, 1470, 2464
RseI	CAYNNNNRTG	1 cut(s)	731
SacI	GAGCTC	2 cut(s)	150, 300
SatI	GCNGC	8 cut(s)	521, 524, 740, 1117, 1677, 1824, 2472, 2517
Sau3AI	GATC	7 cut(s)	11, 723, 820, 1081, 1288, 1487, 1636
ScaI	AGTACT	1 cut(s)	2465
SchI	GAGTC	5 cut(s)	679, 1103, 1186, 1760, 2837
ScrFI	CCNGG	5 cut(s)	104, 411, 987, 1604, 2311
SduI	GDGCHC	4 cut(s)	150, 300, 2068, 2601
SfaNI	GCATC	3 cut(s)	877, 2086, 2580
SfcI	CTRYAG	3 cut(s)	480, 524, 2722
SinI	GGWCC	9 cut(s)	199, 263, 560, 710, 920, 1241, 1497, 1978, 2791
SmiMI	CAYNNNNRTG	1 cut(s)	731
SmlI	CTYRAG	2 cut(s)	2058, 2210
SmoI	CTYRAG	2 cut(s)	2058, 2210
SseBI	AGGCCT	2 cut(s)	312, 2449
SsiI	CCGC	8 cut(s)	15, 696, 1116, 1677, 1716, 1824, 2585, 2732
SspI	AATATT	2 cut(s)	2137, 2708
SspMI	CTAG	5 cut(s)	1263, 2105, 2154, 2591, 2795
SstI	GAGCTC	2 cut(s)	150, 300
StuI	AGGCCT	2 cut(s)	312, 2449
StyD4I	CCNGG	5 cut(s)	102, 409, 985, 1602, 2309
StyI	CCWWGG	3 cut(s)	18, 1938, 2142
TaaI	ACNGT	6 cut(s)	504, 601, 1339, 1988, 2004, 2511
TaiI	ACGT	3 cut(s)	1175, 2151, 2327
TaqI	TCGA	1 cut(s)	423
TatI	WGTACW	1 cut(s)	2463
TauI	GCSGC	3 cut(s)	1119, 1679, 1826
TfiI	GAWTC	8 cut(s)	235, 434, 766, 832, 959, 1360, 1646, 2777
TscAI	CASTG	9 cut(s)	78, 337, 1693, 1744, 1905, 2007, 2606, 2611, 2670
TseFI	GTSAC	3 cut(s)	1807, 2305, 2353
TseI	GCWGC	5 cut(s)	520, 523, 739, 2471, 2516
Tsp45I	GTSAC	3 cut(s)	1807, 2305, 2353
TspGWI	ACGGA	2 cut(s)	552, 1371
TspRI	CASTG	9 cut(s)	78, 337, 1693, 1744, 1905, 2007, 2606, 2611, 2670
Tth111I	GACNNNGTC	1 cut(s)	1986
Van91I	CCANNNNNTGG	2 cut(s)	916, 2467
VpaK11BI	GGWCC	9 cut(s)	199, 263, 560, 710, 920, 1241, 1497, 1978, 2791
XapI	RAATTY	7 cut(s)	139, 511, 636, 895, 1325, 1816, 1946
XmiI	GTMKAC	1 cut(s)	2815
XmnI	GAANNNNTTC	4 cut(s)	326, 770, 1696, 2776
XspI	CTAG	5 cut(s)	1263, 2105, 2154, 2591, 2795
ZraI	GACGTC	1 cut(s)	2149
ZrmI	AGTACT	1 cut(s)	2465
Zsp2I	ATGCAT	2 cut(s)	892, 970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.