Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00247

Orthogroup ID

OG0006543

Physical Location & Seq

Genomic Coordinates Reverse (-)

29088 .. 33242

Gene Structure 4155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G006760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGATCCAGAAAGGAAGAGCAGCAGCCAATTCCTTGCTGGTGTTGGTAGTGACCTTGAGAATTTTGATTTGTTGGAGAAGGAGACTGAGAATAATGAGAACGACAGGACATACAGCTACAGAGAACCGCTTCTGAGGAAAAGGACCAACACAACATCTCAGATTGCCATCGTTGGTGCCAATGTCTGCCCCATTGAGAGCCTTGACTATGAGATTTTTGAAAACGATCTATTTAAGCAGGACTGGAGGTCAGCAAAGAAGAGTCAAATACTGCGGTATGTGGTGCTAAAGTGGGCATTTGCACTTGTCATTGGGCTTGTGACTGGCCTAGTTGGCTTCTTCAACAATATTGCAGTCGAGAATATTGCTGGATACAAGCTGCTGTTGACTAGCAGTTTCATGGCAAAGGCACAATATTACAAGGCTTTTGCAGTATTTGCTTCCATAAACGTAGGTTTAGCAACAGCGGCTGCGGCTCTTTGTGCTTTCATTGCTCCTGCAGCAGCAGGTTCTGGTATTCCGGAGGTCAAAGCTTATTTAAATGGAATAGATGCATATTCAATACTGGCTCCAAGCACTCTTTTTGTCAAGATTTTTGGTTCCATTCTTTGTGTTTCTGCCGGATTTGTGGTTGGTAAAGAAGGCCCCATGGTACATACAGGTGCTTGCATAGCCTCTTTGCTTGGGCAGGGCGGTTCTCGCAAGTATCATTTGACCTGGTCGTGGCTAAGATACTTCAAAAATGATCGTGACCGACGAGACTTGATCACATGTGGTGCTGCAGCTGGTGTGGCTGCTGCCTTTCGTGCTCCGGTTGGCGGTGTTCTTTTTGCCCTTGAAGAAGCAGCTTCATGGTGGCGGAGTGCTCTTCTTTGGAGAACCTTTTTCACGACAGCAATAGTTGCAATTGTACTGAGAGGTTTCGTACAGTACTGTGCTACAGGAAACTGTGGCCTATTTGGGGAAGGCGGTCTAATTATGTACGACGTCAGTGCAGCTGACGCAACATATAGTGCCCCTGATATACTAGCAGTATTACTCCTCGGTGTTTTTGGAGGAATTTTTGGAAGTATATATAACTATTGTGTTGACAAGGTCATCCGAACTTATAGCATCATTCATGAAAAAGGTGCTGCTCACAAGATCTTACTTGTTATCACCATTTCCCTATTGACGTCATCCGTTGCTTTTGGCTTGCCATGGTTTGCAAGGTGCATCGCATGCCCTACTGATCTGACTGTCACTTGTCCTACTGTTGGGAAAACTGGCAACTATATAAGCTTCAACTGCCCATCAGGCTATTACAATGACATGGCCTCCCTCTTTCTGAACACTAACGATGATGCTATTCGTAATCTATTTAGCACCGATACAACAAAAGAATTCCACATATACTCTCTTTTCATCTTCTTTGCTGCTGTTTACATCCTTGGAATTCTTACATATGGCATTGCTATTCCTTCTGGACTTTTCATCCCTGTCATACTAGCCGGAGCTTGCTATGGTCGTCTTGTTGGGAGGTTGTTTGAATCAATATCTACTCTCGACACAGGCCTCTTTGCCCTACTTGGAGCTGCCTCGTTCCTTGGTGGCACTATGCGGATGACAGTTTCCCTATGCGTCATATTGCTTGAACTTACCAATGACTTACTGTTGCTTCCCCTGGTGATGTTGGTCCTGCTTATTTCAAAAACTGTGGCTGATAACTTTAACAAGGGAATTTATGACCAGATAGTTAAGATAAAGGGATTGCCTTATTTGGAGGCTCATGCAGAACCTTACATGAAGCATTTGGTCGCAAGTGATGTTGTTTCAGGTCCGTTGGTTACCTTTTCTGGTATTGAGAAGGTAGGCTATATACTGCATGCTTTGAGGACCACAGGGCATAATGGATTCCCAGTGATTGATGAACCACCTTTTTCGGACACTCCTGAGTTGTGTGGTCTTGTTTTAAGGTCCCATTTGCTTACTTTGCTCAACGGTAAGATCTTTTCAAGGGAAAGGATTCTTTGTGGAGAAGAGATCTTACGCAGATTTGATGCATTTGATTTTGCCAAGGCGGGATCAGGAAAGGGACTCAAAGTGGAAGATCTTGATATTGAAGAGGAAGAGATGGAAATGTATGTTGACCTCCATCCTATTGCAAATGCATCCCCATACACAGTTGTTGAGACAATGTCACTAGCCAAAGCCGCTATTCTGTTTCGACAACTTGGTCTCAGGCACTTATGTTTGGTACCAAAGAGTCAAGGGAGATCTCCAATCGTCGGAATTCTGACACGGCATGACTTCATGCCAGAGCACATTCTGGGACTCTTCCCTAATATCAAGCCTCACAACAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005247 GO:0005253 GO:0005254 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0008150 GO:0008308 GO:0008509 GO:0009705 GO:0015075 GO:0015103 GO:0015108 GO:0015267 GO:0015318 GO:0015698 GO:0016020 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098656 GO:0098660 GO:0098661 GO:0098805 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

781

Amino Acids

85.25

Weight (kDa)

6.45

Isoelectric Point (pI)

34.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	155 - 568	7.4e-77	Voltage gated chloride channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49890
fragaria_vesca	FvH4_1g25850 FvH4_1g25850
malus_domestica	MD00G1030600.v1.1
prunus_persica	Prupe.1G583800_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1 Prupe.4G288000_v2.0.a1
pyrus_communis	pycom08g21410 pycom520g01280
rosa_chinensis	RchiOBHm_Chr3g0484991
rosa_laevigata	RLG00000023179
rosa_multiflora	Rmu_sc0006040.1_g000024 Rmu_sc0009462.1_g000005
rosa_roxburghii	Rroxscaffold_6G00397280
rosa_rugosa	Rorug03G0214900.1 Rorug03G0215000
rosa_samantha	Rh3AG265300 Rh3CG298700 Rh3DG294600
rosa_wichuraiana	Rw0G006760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2214
AatII	GACGTC	2 cut(s)	990, 1178
Acc36I	ACCTGC	1 cut(s)	497
Acc65I	GGTACC	1 cut(s)	2236
AccB1I	GGYRCC	2 cut(s)	176, 2236
AccIII	TCCGGA	1 cut(s)	520
AclWI	GGATC	2 cut(s)	12, 2071
AcsI	RAATTY	6 cut(s)	61, 1059, 1382, 1434, 1719, 2271
AcyI	GRCGYC	2 cut(s)	987, 1175
AfaI	GTAC	6 cut(s)	654, 912, 927, 932, 983, 2238
AfiI	CCNNNNNNNGG	5 cut(s)	723, 818, 961, 1256, 2267
AflIII	ACRYGT	1 cut(s)	770
AhdI	GACNNNNNGTC	1 cut(s)	247
AjnI	CCWGG	2 cut(s)	716, 1662
AluBI	AGCT	9 cut(s)	117, 379, 533, 785, 848, 998, 1281, 1496, 1574
AluI	AGCT	9 cut(s)	117, 379, 533, 785, 848, 998, 1281, 1496, 1574
Alw21I	GWGCWC	3 cut(s)	811, 868, 2304
Alw26I	GTCTC	4 cut(s)	77, 753, 2165, 2222
AlwI	GGATC	2 cut(s)	12, 2071
AlwNI	CAGNNNCTG	2 cut(s)	470, 512
Aor13HI	TCCGGA	1 cut(s)	520
AoxI	GGCC	5 cut(s)	325, 643, 952, 1314, 1552
ApoI	RAATTY	6 cut(s)	61, 1059, 1382, 1434, 1719, 2271
Asp700I	GAANNNNTTC	2 cut(s)	129, 2004
Asp718I	GGTACC	1 cut(s)	2236
AspS9I	GGNCC	6 cut(s)	144, 644, 1675, 1817, 1875, 1956
AsuHPI	GGTGA	2 cut(s)	1150, 1678
AvaII	GGWCC	5 cut(s)	144, 1675, 1817, 1875, 1956
BaeGI	GKGCMC	1 cut(s)	1018
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	2 cut(s)	176, 2236
BarI	GAAGNNNNNNTAC	2 cut(s)	2010, 2042
Bbv12I	GWGCWC	3 cut(s)	811, 868, 2304
BccI	CCATC	4 cut(s)	176, 1300, 2107, 2142
BceAI	ACGGC	1 cut(s)	2297
BcgI	CGANNNNNNTGC	4 cut(s)	347, 381, 974, 1008
BciT130I	CCWGG	2 cut(s)	718, 1664
BciVI	GTATCC	1 cut(s)	365
BclI	TGATCA	1 cut(s)	765
BcoDI	GTCTC	4 cut(s)	77, 753, 2165, 2222
BfaI	CTAG	6 cut(s)	329, 390, 1028, 1487, 2183, 2344
BfmI	CTRYAG	4 cut(s)	118, 498, 780, 939
BfuAI	ACCTGC	1 cut(s)	497
BfuI	GTATCC	1 cut(s)	365
BglI	GCCNNNNNGGC	2 cut(s)	333, 1296
BglII	AGATCT	5 cut(s)	1143, 1986, 2022, 2089, 2255
BmcAI	AGTACT	1 cut(s)	932
Bme1390I	CCNGG	2 cut(s)	718, 1664
Bme18I	GGWCC	5 cut(s)	144, 1675, 1817, 1875, 1956
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmgT120I	GGNCC	6 cut(s)	144, 644, 1675, 1817, 1875, 1956
BmiI	GGNNCC	7 cut(s)	6, 178, 570, 601, 646, 1958, 2238
BmrFI	CCNGG	2 cut(s)	718, 1664
BmrI	ACTGGG	1 cut(s)	1892
BmsI	GCATC	6 cut(s)	541, 1122, 1224, 1333, 2029, 2159
BmuI	ACTGGG	1 cut(s)	1892
BpmI	CTGGAG	1 cut(s)	265
BpuEI	CTTGAG	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	167
BsaHI	GRCGYC	2 cut(s)	987, 1175
BsaI	GGTCTC	1 cut(s)	2222
BsaJI	CCNNGG	7 cut(s)	648, 1042, 1199, 1429, 1585, 1662, 2055
BsaWI	WCCGGW	2 cut(s)	520, 811
BsaXI	ACNNNNNCTCC	2 cut(s)	1301, 1331
Bsc4I	CCNNNNNNNGG	5 cut(s)	723, 818, 961, 1256, 2267
Bse1I	ACTGG	5 cut(s)	248, 328, 570, 1270, 1898
Bse3DI	GCAATG	2 cut(s)	489, 1449
Bse8I	GATNNNNATC	1 cut(s)	167
BseAI	TCCGGA	1 cut(s)	520
BseBI	CCWGG	2 cut(s)	718, 1664
BseDI	CCNNGG	7 cut(s)	648, 1042, 1199, 1429, 1585, 1662, 2055
BseGI	GGATG	7 cut(s)	1098, 1178, 1425, 1473, 1608, 2134, 2150
BseJI	GATNNNNATC	1 cut(s)	167
BseLI	CCNNNNNNNGG	5 cut(s)	723, 818, 961, 1256, 2267
BseMI	GCAATG	2 cut(s)	489, 1449
BseMII	CTCAG	6 cut(s)	78, 125, 173, 905, 1923, 2233
BseNI	ACTGG	5 cut(s)	248, 328, 570, 1270, 1898
BseRI	GAGGAG	1 cut(s)	1031
BseSI	GKGCMC	1 cut(s)	1018
BsgI	GTGCAG	1 cut(s)	1014
BshFI	GGCC	5 cut(s)	327, 645, 954, 1316, 1554
BshNI	GGYRCC	2 cut(s)	176, 2236
BsiHKAI	GWGCWC	3 cut(s)	811, 868, 2304
BsiSI	CCGG	4 cut(s)	521, 621, 812, 1491
BslFI	GGGAC	3 cut(s)	1942, 2088, 2325
BslI	CCNNNNNNNGG	5 cut(s)	723, 818, 961, 1256, 2267
BsmAI	GTCTC	4 cut(s)	77, 753, 2165, 2222
BsmFI	GGGAC	3 cut(s)	1942, 2088, 2325
BsnI	GGCC	5 cut(s)	327, 645, 954, 1316, 1554
Bso31I	GGTCTC	1 cut(s)	2222
Bsp1286I	GDGCHC	4 cut(s)	811, 868, 1018, 2304
Bsp13I	TCCGGA	1 cut(s)	520
Bsp19I	CCATGG	2 cut(s)	648, 1199
BspANI	GGCC	5 cut(s)	327, 645, 954, 1316, 1554
BspCNI	CTCAG	6 cut(s)	79, 126, 172, 906, 1924, 2232
BspEI	TCCGGA	1 cut(s)	520
BspHI	TCATGA	1 cut(s)	1120
BspLI	GGNNCC	7 cut(s)	6, 178, 570, 601, 646, 1958, 2238
BspMAI	CTGCAG	2 cut(s)	502, 784
BspMI	ACCTGC	1 cut(s)	497
BspPI	GGATC	2 cut(s)	12, 2071
BspQI	GCTCTTC	2 cut(s)	11, 873
BspT107I	GGYRCC	2 cut(s)	176, 2236
BspTNI	GGTCTC	1 cut(s)	2222
BsrDI	GCAATG	2 cut(s)	489, 1449
BsrI	ACTGG	5 cut(s)	248, 328, 570, 1270, 1898
BssECI	CCNNGG	7 cut(s)	648, 1042, 1199, 1429, 1585, 1662, 2055
BssNI	GRCGYC	2 cut(s)	987, 1175
BssT1I	CCWWGG	5 cut(s)	648, 1199, 1429, 1585, 2055
Bst2UI	CCWGG	2 cut(s)	718, 1664
Bst6I	CTCTTC	7 cut(s)	11, 254, 873, 2013, 2097, 2103, 2321
BstACI	GRCGYC	2 cut(s)	987, 1175
BstAPI	GCANNNNNTGC	3 cut(s)	437, 902, 1221
BstC8I	GCNNGC	5 cut(s)	667, 1196, 1222, 1498, 1866
BstDEI	CTNAG	7 cut(s)	87, 134, 159, 728, 914, 1932, 2219
BstDSI	CCRYGG	2 cut(s)	648, 1199
BstEII	GGTNACC	1 cut(s)	1825
BstF5I	GGATG	7 cut(s)	1098, 1178, 1425, 1473, 1608, 2134, 2150
BstMAI	GTCTC	4 cut(s)	77, 753, 2165, 2222
BstNI	CCWGG	2 cut(s)	718, 1664
BstNSI	RCATGY	3 cut(s)	774, 1224, 1868
BstPI	GGTNACC	1 cut(s)	1825
BstSCI	CCNGG	2 cut(s)	716, 1662
BstSFI	CTRYAG	4 cut(s)	118, 498, 780, 939
BstSLI	GKGCMC	1 cut(s)	1018
BstX2I	RGATCY	6 cut(s)	4, 1143, 1986, 2022, 2089, 2255
BstYI	RGATCY	6 cut(s)	4, 1143, 1986, 2022, 2089, 2255
BsuI	GTATCC	1 cut(s)	365
BsuRI	GGCC	5 cut(s)	327, 645, 954, 1316, 1554
BtgI	CCRYGG	2 cut(s)	648, 1199
BtgZI	GCGATG	1 cut(s)	1201
BtsCI	GGATG	7 cut(s)	1098, 1178, 1425, 1473, 1608, 2134, 2150
BtsIMutI	CAGTG	2 cut(s)	997, 1905
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	5 cut(s)	667, 1196, 1222, 1498, 1866
CaiI	CAGNNNCTG	2 cut(s)	470, 512
CciI	TCATGA	1 cut(s)	1120
Cfr13I	GGNCC	6 cut(s)	144, 644, 1675, 1817, 1875, 1956
CseI	GACGC	2 cut(s)	1010, 1609
CsiI	ACCWGGT	1 cut(s)	716
Csp6I	GTAC	6 cut(s)	653, 911, 926, 931, 982, 2237
CspCI	CAANNNNNGTGG	2 cut(s)	1677, 1712
CviQI	GTAC	6 cut(s)	653, 911, 926, 931, 982, 2237
DdeI	CTNAG	7 cut(s)	87, 134, 159, 728, 914, 1932, 2219
DraI	TTTAAA	1 cut(s)	540
DrdI	GACNNNNNNGTC	1 cut(s)	2214
DriI	GACNNNNNGTC	1 cut(s)	247
DseDI	GACNNNNNNGTC	1 cut(s)	2214
Eam1104I	CTCTTC	7 cut(s)	11, 254, 873, 2013, 2097, 2103, 2321
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EarI	CTCTTC	7 cut(s)	11, 254, 873, 2013, 2097, 2103, 2321
EciI	GGCGGA	1 cut(s)	874
Eco130I	CCWWGG	5 cut(s)	648, 1199, 1429, 1585, 2055
Eco147I	AGGCCT	1 cut(s)	1554
Eco31I	GGTCTC	1 cut(s)	2222
Eco47I	GGWCC	5 cut(s)	144, 1675, 1817, 1875, 1956
Eco91I	GGTNACC	1 cut(s)	1825
EcoO109I	RGGNCCY	2 cut(s)	644, 1956
EcoO65I	GGTNACC	1 cut(s)	1825
EcoRI	GAATTC	3 cut(s)	1382, 1434, 2271
EcoRII	CCWGG	2 cut(s)	716, 1662
EcoT14I	CCWWGG	5 cut(s)	648, 1199, 1429, 1585, 2055
EcoT22I	ATGCAT	3 cut(s)	556, 2044, 2152
ErhI	CCWWGG	5 cut(s)	648, 1199, 1429, 1585, 2055
FaqI	GGGAC	3 cut(s)	1942, 2088, 2325
FauI	CCCGC	1 cut(s)	2053
FauNDI	CATATG	1 cut(s)	1444
FbaI	TGATCA	1 cut(s)	765
FokI	GGATG	7 cut(s)	1085, 1165, 1412, 1460, 1615, 2121, 2137
FspBI	CTAG	6 cut(s)	329, 390, 1028, 1487, 2183, 2344
GsuI	CTGGAG	1 cut(s)	265
HaeIII	GGCC	5 cut(s)	327, 645, 954, 1316, 1554
HapII	CCGG	4 cut(s)	521, 621, 812, 1491
HgaI	GACGC	2 cut(s)	1010, 1609
Hin1I	GRCGYC	2 cut(s)	987, 1175
HincII	GTYRAC	3 cut(s)	387, 1090, 2128
HindII	GTYRAC	3 cut(s)	387, 1090, 2128
HindIII	AAGCTT	2 cut(s)	531, 1279
HinfI	GANTC	7 cut(s)	262, 1529, 1893, 2005, 2076, 2245, 2313
HpaII	CCGG	4 cut(s)	521, 621, 812, 1491
HphI	GGTGA	2 cut(s)	1150, 1678
Hpy166II	GTNNAC	4 cut(s)	387, 1090, 1423, 2128
Hpy188I	TCNGA	8 cut(s)	135, 162, 1103, 1236, 1329, 1924, 2270, 2277
Hpy8I	GTNNAC	4 cut(s)	387, 1090, 1423, 2128
Hpy99I	CGWCG	3 cut(s)	759, 989, 2270
HpyAV	CCTTC	5 cut(s)	73, 635, 959, 1470, 1840
HpyCH4IV	ACGT	3 cut(s)	450, 987, 1175
HpyF3I	CTNAG	7 cut(s)	87, 134, 159, 728, 914, 1932, 2219
HpySE526I	ACGT	3 cut(s)	450, 987, 1175
Hsp92I	GRCGYC	2 cut(s)	987, 1175
Kpn2I	TCCGGA	1 cut(s)	520
KpnI	GGTACC	1 cut(s)	2240
Ksp22I	TGATCA	1 cut(s)	765
LguI	GCTCTTC	2 cut(s)	11, 873
LmnI	GCTCC	5 cut(s)	499, 574, 814, 1493, 1571
LweI	GCATC	6 cut(s)	541, 1122, 1224, 1333, 2029, 2159
MabI	ACCWGGT	1 cut(s)	716
MaeI	CTAG	6 cut(s)	329, 390, 1028, 1487, 2183, 2344
MaeII	ACGT	3 cut(s)	450, 987, 1175
MaeIII	GTNAC	6 cut(s)	50, 319, 749, 1240, 1825, 2178
MfeI	CAATTG	1 cut(s)	906
MflI	RGATCY	6 cut(s)	4, 1143, 1986, 2022, 2089, 2255
MhlI	GDGCHC	4 cut(s)	811, 868, 1018, 2304
MluCI	AATT	9 cut(s)	29, 61, 906, 975, 1059, 1382, 1434, 1719, 2271
MlyI	GAGTC	4 cut(s)	271, 2070, 2254, 2307
MmeI	TCCRAC	2 cut(s)	54, 2248
Mph1103I	ATGCAT	3 cut(s)	556, 2044, 2152
MroI	TCCGGA	1 cut(s)	520
MroXI	GAANNNNTTC	2 cut(s)	129, 2004
MseI	TTAA	5 cut(s)	234, 539, 1710, 1737, 1952
MslI	CAYNNNNRTG	1 cut(s)	660
MspA1I	CMGCKG	3 cut(s)	467, 785, 998
MspI	CCGG	4 cut(s)	521, 621, 812, 1491
MspR9I	CCNGG	2 cut(s)	718, 1664
MunI	CAATTG	1 cut(s)	906
MvaI	CCWGG	2 cut(s)	718, 1664
NcoI	CCATGG	2 cut(s)	648, 1199
NdeI	CATATG	1 cut(s)	1444
NlaIV	GGNNCC	7 cut(s)	6, 178, 570, 601, 646, 1958, 2238
NmuCI	GTSAC	5 cut(s)	50, 319, 749, 1240, 2178
NsiI	ATGCAT	3 cut(s)	556, 2044, 2152
NspI	RCATGY	3 cut(s)	774, 1224, 1868
PaeI	GCATGC	2 cut(s)	1224, 1868
PagI	TCATGA	1 cut(s)	1120
PceI	AGGCCT	1 cut(s)	1554
PciI	ACATGT	1 cut(s)	770
PciSI	GCTCTTC	2 cut(s)	11, 873
PcsI	WCGNNNNNNNCGW	1 cut(s)	754
PdmI	GAANNNNTTC	2 cut(s)	129, 2004
PfeI	GAWTC	3 cut(s)	1529, 1893, 2005
PflFI	GACNNNGTC	3 cut(s)	718, 1094, 2176
PleI	GAGTC	4 cut(s)	270, 2070, 2253, 2307
PpsI	GAGTC	4 cut(s)	270, 2070, 2253, 2307
PpuMI	RGGWCCY	1 cut(s)	1956
PscI	ACATGT	1 cut(s)	770
Psp5II	RGGWCCY	1 cut(s)	1956
Psp6I	CCWGG	2 cut(s)	716, 1662
PspEI	GGTNACC	1 cut(s)	1825
PspGI	CCWGG	2 cut(s)	716, 1662
PspN4I	GGNNCC	7 cut(s)	6, 178, 570, 601, 646, 1958, 2238
PspPI	GGNCC	6 cut(s)	144, 644, 1675, 1817, 1875, 1956
PspPPI	RGGWCCY	1 cut(s)	1956
PstI	CTGCAG	2 cut(s)	502, 784
PstNI	CAGNNNCTG	2 cut(s)	470, 512
PsuI	RGATCY	6 cut(s)	4, 1143, 1986, 2022, 2089, 2255
PsyI	GACNNNGTC	3 cut(s)	718, 1094, 2176
PvuII	CAGCTG	2 cut(s)	785, 998
RsaI	GTAC	6 cut(s)	654, 912, 927, 932, 983, 2238
RsaNI	GTAC	6 cut(s)	653, 911, 926, 931, 982, 2237
RseI	CAYNNNNRTG	1 cut(s)	660
SapI	GCTCTTC	2 cut(s)	11, 873
SaqAI	TTAA	5 cut(s)	234, 539, 1710, 1737, 1952
Sau96I	GGNCC	6 cut(s)	144, 644, 1675, 1817, 1875, 1956
ScaI	AGTACT	1 cut(s)	932
SchI	GAGTC	4 cut(s)	271, 2070, 2254, 2307
ScrFI	CCNGG	2 cut(s)	718, 1664
SduI	GDGCHC	4 cut(s)	811, 868, 1018, 2304
SexAI	ACCWGGT	1 cut(s)	716
SfaNI	GCATC	6 cut(s)	541, 1122, 1224, 1333, 2029, 2159
SfcI	CTRYAG	4 cut(s)	118, 498, 780, 939
SinI	GGWCC	5 cut(s)	144, 1675, 1817, 1875, 1956
SmiI	ATTTAAAT	1 cut(s)	540
SmiMI	CAYNNNNRTG	1 cut(s)	660
SmlI	CTYRAG	1 cut(s)	56
SmoI	CTYRAG	1 cut(s)	56
SphI	GCATGC	2 cut(s)	1224, 1868
Sse9I	AATT	9 cut(s)	29, 61, 906, 975, 1059, 1382, 1434, 1719, 2271
SseBI	AGGCCT	1 cut(s)	1554
SspI	AATATT	3 cut(s)	349, 364, 416
SspMI	CTAG	6 cut(s)	329, 390, 1028, 1487, 2183, 2344
StuI	AGGCCT	1 cut(s)	1554
StyD4I	CCNGG	2 cut(s)	716, 1662
StyI	CCWWGG	5 cut(s)	648, 1199, 1429, 1585, 2055
SwaI	ATTTAAAT	1 cut(s)	540
TaiI	ACGT	3 cut(s)	453, 990, 1178
TaqI	TCGA	3 cut(s)	357, 1545, 2206
TaqII	GACCGA	1 cut(s)	768
TasI	AATT	9 cut(s)	29, 61, 906, 975, 1059, 1382, 1434, 1719, 2271
TatI	WGTACW	2 cut(s)	910, 930
TauI	GCSGC	3 cut(s)	470, 476, 2195
TfiI	GAWTC	3 cut(s)	1529, 1893, 2005
Tru1I	TTAA	5 cut(s)	234, 539, 1710, 1737, 1952
Tru9I	TTAA	5 cut(s)	234, 539, 1710, 1737, 1952
TscAI	CASTG	2 cut(s)	997, 1905
TseFI	GTSAC	5 cut(s)	50, 319, 749, 1240, 2178
Tsp45I	GTSAC	5 cut(s)	50, 319, 749, 1240, 2178
TspGWI	ACGGA	2 cut(s)	1171, 1809
TspRI	CASTG	2 cut(s)	997, 1905
Tth111I	GACNNNGTC	3 cut(s)	718, 1094, 2176
VpaK11BI	GGWCC	5 cut(s)	144, 1675, 1817, 1875, 1956
XapI	RAATTY	6 cut(s)	61, 1059, 1382, 1434, 1719, 2271
XceI	RCATGY	3 cut(s)	774, 1224, 1868
XcmI	CCANNNNNNNNNTGG	1 cut(s)	35
XmnI	GAANNNNTTC	2 cut(s)	129, 2004
XspI	CTAG	6 cut(s)	329, 390, 1028, 1487, 2183, 2344
ZraI	GACGTC	2 cut(s)	988, 1176
ZrmI	AGTACT	1 cut(s)	932
Zsp2I	ATGCAT	3 cut(s)	556, 2044, 2152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.