RchiOBHm_Chr7g0225621

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0017200
Physical Location & Seq
Reverse (-)
48467770 .. 48470758
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1707 bp
ATGGTTAACTCTATAGGGCTTTTCGCCTTTTGTGCTGTTTTTCTTTTTCTTGATGCTGCAAATGGGAAAACTCATCACCACAAGTTTGTGGTAAAGTCATCTTCTTATAGTCGACTATGTAGTAGTAAGGACATCTTGACTGTGAATGGGAGATTCCCAGGGCCAACTTTGAAAGCCCACAGAGGGGATAAAATGGTTATTGAAGTTCATAACAAGGCAAATTTTAACATCACTCTTCATTGGCACGGAGTTAGACTAGTAAGAAATCCTTGGTCGGATGGACCAATGTATATCACACAATGCCCTATACAGCCAGGAAACAAGTACACCTACAGAATTGAGTTTACTACAGAAGAAGGAACAATATGGTGGCATGCACATAGTGGATGGGCAAGAGCGACGGTTCATGGAGCCATTTTTGTTTATCCCAAACCTGGATCCAGCTATCCTTTTCCAAAACCTTTTGCCGAGGTCCCTATCATACTAGGTGAGTGGTGGAAGAGAGATGTCATGGAGATACCAAGTAATGCAAATTTAACAGGAGGAGAACCTATACTCTCAGATGCCTATACCATAAATGGAGAACCAGGCTTTCTATATCCATGCTCCAAAAAAGGGACCTTTAATATGCTAGTTGAACATGGAAAAACCTATCTTCTTCGGATCATTAGTGCGGTAATGGACGAAGAGCTATTCTTCGGCATTGCACATCACAAGCTGATTTTAGTCGGAAAAGATGGTGCCTATACAAAACAAGTTGAAACCTCCTACATAATGATAGCCCCTGGCCAATCCATGGACCTGTTACTAGAAGCAAACCAACCTCATGGGCTCTATGTCATGGCTGCAAGAGCATATTCAAGCGCCATCGGAGCTGGTTTCGACAAGACCATGACATCTGCCATTGTTAAATATCATGGTTCAGATGATCACCACCACCAGCCTCGAGGACGTCCTGCCTTCCCACATCTTCCACCCTATAACAGAACACAAGCAGCAACAGACTTTACCAAGCAATTTAGGAGCCTTGCAACAAAAGACCACCCTACCAAAGTCCCATTACAAGTAGACACCCACTTGTTTTTTACCATATCCGTAAACCTACTTAACTGCAGTAATAAACCGTGCACTGGTCCCTTTGGGAAAAGATTTTCAGCTAGTGTCAACAACATAAGCTTTGTCATGCCACCGTCGATTGACATCCTTCGAGCTTACTATTATAAAATTCCGGGGGTATTCGAGAAGGATTTTCCAGAAAAACCACCAAAGGAATTCAATTACACTGGTGATGATCTTCCAGAGAGATTTTTGGCACCTTCCTATGGGACTAAGGTGATGCTTTTGAAGTACAATGTTAGTGTTGAGCTGGTTTTGCAAGGGACCAATGTGTTAGCAAGTGATAACCATCCTGTACATTTACATGGATATAGCTTCTATGTTGTTGGCTCCGGGTTTGGAAATTTCAACCCTAAACTGGATCCTTTGAGATACAATCTTGTTGATCCTCCTGAGGAGAGTACTGTTGGAGTTCCTAAAAATGGCTGGGTCGCAATCCGATTCAGAGCAGATAATCCAGGCGTGTGGTTGATGCATTGTCACATAGAGCGTCATCAAACATGGGGAATGTCTATGGTGTTCCTAGTCCAAAATGGTGTTAGTCATCATAGTAGAATTCTATCACCTCCTCATGATTTGCCTACTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

568

Amino Acids

63.77

Weight (kDa)

8.85

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 31 - 144 1.1e-39 Multicopper oxidase
Cu-oxidase PF00394 157 - 308 2.2e-35 Multicopper oxidase
Cu-oxidase_2 PF07731 416 - 550 1.4e-42 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09360
fragaria_vesca FvH4_5g30720
malus_domestica MD15G1412600.v1.1
prunus_persica Prupe.1G559300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0225621
rosa_laevigata RLG00000001800
rosa_multiflora Rmu_co8516127.1_g000001
rosa_roxburghii Rroxscaffold_3G00233630
rosa_rugosa Rorug07G0231900
rosa_samantha Rh7AG371900 Rh7BG365800 Rh7DG376600
rosa_wichuraiana Rw7G031780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1221
AatII GACGTC 1 cut(s) 955
AbsI CCTCGAGG 1 cut(s) 945
AccB1I GGYRCC 2 cut(s) 740, 1312
AccB7I CCANNNNNTGG 1 cut(s) 796
AccI GTMKAC 2 cut(s) 112, 1068
AciI CCGC 1 cut(s) 674
AclWI GGATC 6 cut(s) 432, 445, 671, 1472, 1485, 1496
AcoI YGGCCR 1 cut(s) 787
AcsI RAATTY 6 cut(s) 220, 532, 1224, 1271, 1459, 1671
AcyI GRCGYC 1 cut(s) 952
AdeI CACNNNGTG 1 cut(s) 383
AfaI GTAC 4 cut(s) 326, 1349, 1413, 1519
AfiI CCNNNNNNNGG 9 cut(s) 183, 184, 434, 615, 796, 1130, 1322, 1474, 1538
AgsI TTSAA 8 cut(s) 172, 203, 638, 761, 861, 1276, 1345, 1465
AhlI ACTAGT 1 cut(s) 256
AjnI CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
AluBI AGCT 9 cut(s) 444, 691, 718, 875, 1157, 1176, 1211, 1366, 1431
AluI AGCT 9 cut(s) 444, 691, 718, 875, 1157, 1176, 1211, 1366, 1431
Alw21I GWGCWC 1 cut(s) 1130
Alw44I GTGCAC 1 cut(s) 1126
AlwI GGATC 6 cut(s) 432, 445, 671, 1472, 1485, 1496
Ama87I CYCGRG 1 cut(s) 945
AoxI GGCC 2 cut(s) 161, 787
ApaLI GTGCAC 1 cut(s) 1126
ApeKI GCWGC 3 cut(s) 56, 845, 995
ApoI RAATTY 6 cut(s) 220, 532, 1224, 1271, 1459, 1671
AspLEI GCGC 1 cut(s) 866
AspS9I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
AsuC2I CCSGG 2 cut(s) 1230, 1450
AsuHPI GGTGA 6 cut(s) 68, 500, 923, 1298, 1345, 1671
AvaI CYCGRG 1 cut(s) 945
AvaII GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
AxyI CCTNAGG 1 cut(s) 1509
BaeGI GKGCMC 1 cut(s) 1130
BalI TGGCCA 1 cut(s) 789
BamHI GGATCC 2 cut(s) 437, 1477
BanI GGYRCC 2 cut(s) 740, 1312
BanII GRGCYC 1 cut(s) 834
Bbv12I GWGCWC 1 cut(s) 1130
BbvI GCAGC 3 cut(s) 43, 832, 1007
BccI CCATC 5 cut(s) 272, 381, 731, 875, 1413
BciT130I CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 2 cut(s) 1230, 1450
BcuI ACTAGT 1 cut(s) 256
BfaI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
BfmI CTRYAG 4 cut(s) 12, 331, 348, 1111
BfoI RGCGCY 1 cut(s) 867
BisI GCNGC 3 cut(s) 57, 846, 996
BlsI GCNGC 3 cut(s) 58, 847, 997
BmcAI AGTACT 1 cut(s) 1519
Bme1390I CCNGG 8 cut(s) 159, 315, 435, 588, 786, 1230, 1450, 1575
Bme18I GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
BmeT110I CYCGRG 1 cut(s) 945
BmgT120I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
BmrFI CCNGG 8 cut(s) 159, 315, 435, 588, 786, 1230, 1450, 1575
BmsI GCATC 4 cut(s) 43, 553, 1326, 1578
BpuMI CCSGG 2 cut(s) 1230, 1450
BsaBI GATNNNNATC 2 cut(s) 1199, 1404
BsaHI GRCGYC 1 cut(s) 952
BsaJI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
Bsc4I CCNNNNNNNGG 9 cut(s) 183, 184, 434, 615, 796, 1130, 1322, 1474, 1538
Bse1I ACTGG 3 cut(s) 1135, 1288, 1479
Bse21I CCTNAGG 1 cut(s) 1509
Bse3DI GCAATG 1 cut(s) 702
Bse8I GATNNNNATC 2 cut(s) 1199, 1404
BseBI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BseDI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
BseGI GGATG 4 cut(s) 283, 392, 1200, 1405
BseJI GATNNNNATC 2 cut(s) 1199, 1404
BseLI CCNNNNNNNGG 9 cut(s) 183, 184, 434, 615, 796, 1130, 1322, 1474, 1538
BseMI GCAATG 1 cut(s) 702
BseMII CTCAG 2 cut(s) 573, 1500
BseNI ACTGG 3 cut(s) 1135, 1288, 1479
BseRI GAGGAG 3 cut(s) 558, 1526, 1674
BseSI GKGCMC 1 cut(s) 1130
BseXI GCAGC 3 cut(s) 43, 832, 1007
BseYI CCCAGC 1 cut(s) 1542
BshFI GGCC 2 cut(s) 163, 789
BshNI GGYRCC 2 cut(s) 740, 1312
BsiHKAI GWGCWC 1 cut(s) 1130
BsiHKCI CYCGRG 1 cut(s) 945
BsiSI CCGG 2 cut(s) 1229, 1449
BslFI GGGAC 6 cut(s) 458, 631, 1040, 1119, 1339, 1393
BslI CCNNNNNNNGG 9 cut(s) 183, 184, 434, 615, 796, 1130, 1322, 1474, 1538
BsmFI GGGAC 6 cut(s) 458, 631, 1040, 1119, 1339, 1393
BsnI GGCC 2 cut(s) 163, 789
BsoBI CYCGRG 1 cut(s) 945
Bsp1286I GDGCHC 2 cut(s) 834, 1130
Bsp1407I TGTACA 1 cut(s) 1411
Bsp143I GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
Bsp19I CCATGG 1 cut(s) 795
BspACI CCGC 1 cut(s) 674
BspANI GGCC 2 cut(s) 163, 789
BspCNI CTCAG 2 cut(s) 572, 1501
BspHI TCATGA 1 cut(s) 1687
BspMAI CTGCAG 1 cut(s) 1115
BspPI GGATC 6 cut(s) 432, 445, 671, 1472, 1485, 1496
BspQI GCTCTTC 1 cut(s) 681
BspT107I GGYRCC 2 cut(s) 740, 1312
BsrDI GCAATG 1 cut(s) 702
BsrGI TGTACA 1 cut(s) 1411
BsrI ACTGG 3 cut(s) 1135, 1288, 1479
BssECI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
BssMI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
BssNI GRCGYC 1 cut(s) 952
BssT1I CCWWGG 2 cut(s) 269, 795
Bst2UI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
Bst4CI ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
Bst6I CTCTTC 3 cut(s) 240, 494, 681
BstACI GRCGYC 1 cut(s) 952
BstAUI TGTACA 1 cut(s) 1411
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 3 cut(s) 559, 1329, 1509
BstDSI CCRYGG 1 cut(s) 795
BstF5I GGATG 4 cut(s) 283, 392, 1200, 1405
BstH2I RGCGCY 1 cut(s) 867
BstHHI GCGC 1 cut(s) 866
BstKTI GATC 6 cut(s) 440, 666, 931, 1294, 1480, 1504
BstMBI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
BstNI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BstNSI RCATGY 1 cut(s) 377
BstSCI CCNGG 8 cut(s) 157, 313, 433, 586, 784, 1228, 1448, 1573
BstSFI CTRYAG 4 cut(s) 12, 331, 348, 1111
BstSLI GKGCMC 1 cut(s) 1130
BstV1I GCAGC 3 cut(s) 43, 832, 1007
BstX2I RGATCY 2 cut(s) 437, 1477
BstXI CCANNNNNNTGG 2 cut(s) 827, 1581
BstYI RGATCY 2 cut(s) 437, 1477
Bsu36I CCTNAGG 1 cut(s) 1509
BsuRI GGCC 2 cut(s) 163, 789
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 4 cut(s) 283, 392, 1200, 1405
BtsIMutI CAGTG 2 cut(s) 1128, 1281
Cac8I GCNNGC 1 cut(s) 375
CciI TCATGA 1 cut(s) 1687
CfoI GCGC 1 cut(s) 866
Cfr13I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
CseI GACGC 1 cut(s) 1595
Csp6I GTAC 4 cut(s) 325, 1348, 1412, 1518
CviQI GTAC 4 cut(s) 325, 1348, 1412, 1518
DdeI CTNAG 3 cut(s) 559, 1329, 1509
DpnI GATC 6 cut(s) 439, 665, 930, 1293, 1479, 1503
DpnII GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
DraIII CACNNNGTG 1 cut(s) 383
EaeI YGGCCR 1 cut(s) 787
Eam1104I CTCTTC 3 cut(s) 240, 494, 681
EarI CTCTTC 3 cut(s) 240, 494, 681
Eco130I CCWWGG 2 cut(s) 269, 795
Eco24I GRGCYC 1 cut(s) 834
Eco47I GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
Eco81I CCTNAGG 1 cut(s) 1509
Eco88I CYCGRG 1 cut(s) 945
EcoO109I RGGNCCY 2 cut(s) 472, 618
EcoRI GAATTC 2 cut(s) 1271, 1671
EcoRII CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
EcoT14I CCWWGG 2 cut(s) 269, 795
EcoT22I ATGCAT 1 cut(s) 1593
EcoT38I GRGCYC 1 cut(s) 834
ErhI CCWWGG 2 cut(s) 269, 795
FalI AAGNNNNNCTT 4 cut(s) 119, 151, 253, 285
FaqI GGGAC 6 cut(s) 458, 631, 1040, 1119, 1339, 1393
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 2 cut(s) 112, 1068
Fnu4HI GCNGC 3 cut(s) 57, 846, 996
FokI GGATG 4 cut(s) 290, 399, 1187, 1392
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 3 cut(s) 57, 846, 996
FspBI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
GlaI GCGC 1 cut(s) 865
GluI GCNGC 3 cut(s) 57, 846, 996
GsaI CCCAGC 1 cut(s) 1546
HaeII RGCGCY 1 cut(s) 867
HaeIII GGCC 2 cut(s) 163, 789
HapII CCGG 2 cut(s) 1229, 1449
HgaI GACGC 1 cut(s) 1595
HhaI GCGC 1 cut(s) 866
Hin1I GRCGYC 1 cut(s) 952
Hin6I GCGC 1 cut(s) 864
HinP1I GCGC 1 cut(s) 864
HincII GTYRAC 3 cut(s) 7, 113, 1165
HindII GTYRAC 3 cut(s) 7, 113, 1165
HindIII AAGCTT 1 cut(s) 1174
HinfI GANTC 2 cut(s) 153, 1557
HpaI GTTAAC 1 cut(s) 7
HpaII CCGG 2 cut(s) 1229, 1449
HphI GGTGA 6 cut(s) 68, 500, 923, 1298, 1345, 1671
Hpy166II GTNNAC 8 cut(s) 7, 113, 327, 345, 1069, 1099, 1128, 1165
Hpy188I TCNGA 8 cut(s) 277, 562, 663, 731, 872, 925, 1556, 1562
Hpy188III TCNNGA 7 cut(s) 50, 136, 1240, 1253, 1298, 1508, 1688
Hpy8I GTNNAC 8 cut(s) 7, 113, 327, 345, 1069, 1099, 1128, 1165
Hpy99I CGWCG 2 cut(s) 403, 1195
HpyAV CCTTC 5 cut(s) 350, 970, 1214, 1237, 1326
HpyCH4III ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
HpyCH4IV ACGT 1 cut(s) 952
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
HpyF3I CTNAG 3 cut(s) 559, 1329, 1509
HpySE526I ACGT 1 cut(s) 952
Hsp92I GRCGYC 1 cut(s) 952
HspAI GCGC 1 cut(s) 864
Ksp22I TGATCA 1 cut(s) 928
KspAI GTTAAC 1 cut(s) 7
Kzo9I GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
LguI GCTCTTC 1 cut(s) 681
LmnI GCTCC 5 cut(s) 410, 611, 872, 1023, 1451
Lsp1109I GCAGC 3 cut(s) 43, 832, 1007
LweI GCATC 4 cut(s) 43, 553, 1326, 1578
MaeI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
MaeII ACGT 1 cut(s) 952
MaeIII GTNAC 2 cut(s) 804, 1595
MalI GATC 6 cut(s) 439, 665, 930, 1293, 1479, 1503
MboI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
MflI RGATCY 2 cut(s) 437, 1477
MhlI GDGCHC 2 cut(s) 834, 1130
MlsI TGGCCA 1 cut(s) 789
MluCI AATT 9 cut(s) 220, 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
MluNI TGGCCA 1 cut(s) 789
MmeI TCCRAC 3 cut(s) 255, 709, 1504
Mox20I TGGCCA 1 cut(s) 789
Mph1103I ATGCAT 1 cut(s) 1593
MscI TGGCCA 1 cut(s) 789
MseI TTAA 6 cut(s) 6, 225, 536, 624, 909, 1107
MslI CAYNNNNRTG 1 cut(s) 1419
Msp20I TGGCCA 1 cut(s) 789
MspI CCGG 2 cut(s) 1229, 1449
MspR9I CCNGG 8 cut(s) 159, 315, 435, 588, 786, 1230, 1450, 1575
MvaI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
MwoI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
NciI CCSGG 2 cut(s) 1230, 1450
NcoI CCATGG 1 cut(s) 795
NdeII GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
NmeAIII GCCGAG 1 cut(s) 493
NmuCI GTSAC 1 cut(s) 1595
NsiI ATGCAT 1 cut(s) 1593
NspI RCATGY 1 cut(s) 377
PaeI GCATGC 1 cut(s) 377
PaeR7I CTCGAG 1 cut(s) 945
PagI TCATGA 1 cut(s) 1687
PasI CCCWGGG 1 cut(s) 158
PciSI GCTCTTC 1 cut(s) 681
PfeI GAWTC 2 cut(s) 153, 1557
PflMI CCANNNNNTGG 1 cut(s) 796
PkrI GCNGC 3 cut(s) 58, 847, 997
PpuMI RGGWCCY 2 cut(s) 472, 618
PsiI TTATAA 1 cut(s) 1221
Psp5II RGGWCCY 2 cut(s) 472, 618
Psp6I CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
PspFI CCCAGC 1 cut(s) 1542
PspGI CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
PspPI GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
PspPPI RGGWCCY 2 cut(s) 472, 618
PspXI VCTCGAGB 1 cut(s) 945
PstI CTGCAG 1 cut(s) 1115
PsuI RGATCY 2 cut(s) 437, 1477
RsaI GTAC 4 cut(s) 326, 1349, 1413, 1519
RsaNI GTAC 4 cut(s) 325, 1348, 1412, 1518
RseI CAYNNNNRTG 1 cut(s) 1419
SalI GTCGAC 1 cut(s) 111
SapI GCTCTTC 1 cut(s) 681
SaqAI TTAA 6 cut(s) 6, 225, 536, 624, 909, 1107
SatI GCNGC 3 cut(s) 57, 846, 996
Sau3AI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
Sau96I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
ScaI AGTACT 1 cut(s) 1519
ScrFI CCNGG 8 cut(s) 159, 315, 435, 588, 786, 1230, 1450, 1575
SduI GDGCHC 2 cut(s) 834, 1130
SfaNI GCATC 4 cut(s) 43, 553, 1326, 1578
SfcI CTRYAG 4 cut(s) 12, 331, 348, 1111
Sfr274I CTCGAG 1 cut(s) 945
SinI GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
SlaI CTCGAG 1 cut(s) 945
SmiMI CAYNNNNRTG 1 cut(s) 1419
SmlI CTYRAG 1 cut(s) 945
SmoI CTYRAG 1 cut(s) 945
SpeI ACTAGT 1 cut(s) 256
SphI GCATGC 1 cut(s) 377
Sse9I AATT 9 cut(s) 220, 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
SsiI CCGC 1 cut(s) 674
SspMI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
StyD4I CCNGG 8 cut(s) 157, 313, 433, 586, 784, 1228, 1448, 1573
StyI CCWWGG 2 cut(s) 269, 795
TaaI ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
TaiI ACGT 1 cut(s) 955
TaqI TCGA 6 cut(s) 112, 882, 946, 1193, 1207, 1239
TasI AATT 9 cut(s) 220, 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
TatI WGTACW 4 cut(s) 324, 1347, 1411, 1517
TfiI GAWTC 2 cut(s) 153, 1557
Tru1I TTAA 6 cut(s) 6, 225, 536, 624, 909, 1107
Tru9I TTAA 6 cut(s) 6, 225, 536, 624, 909, 1107
TscAI CASTG 2 cut(s) 1135, 1288
TseFI GTSAC 1 cut(s) 1595
TseI GCWGC 3 cut(s) 56, 845, 995
Tsp45I GTSAC 1 cut(s) 1595
TspDTI ATGAA 3 cut(s) 197, 227, 395
TspGWI ACGGA 2 cut(s) 261, 1084
TspRI CASTG 2 cut(s) 1135, 1288
Van91I CCANNNNNTGG 1 cut(s) 796
VneI GTGCAC 1 cut(s) 1126
VpaK11BI GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
XapI RAATTY 6 cut(s) 220, 532, 1224, 1271, 1459, 1671
XceI RCATGY 1 cut(s) 377
XhoI CTCGAG 1 cut(s) 945
XmiI GTMKAC 2 cut(s) 112, 1068
XspI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
ZraI GACGTC 1 cut(s) 953
ZrmI AGTACT 1 cut(s) 1519
Zsp2I ATGCAT 1 cut(s) 1593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.