Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012628

Physical Location & Seq

Genomic Coordinates Forward (+)

51307628 .. 51312077

Gene Structure 4450 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGGAAGACAATGTTGGGCACCTTGGTTCTCCCGAAGGGCAAAGTAATTTAGCAAAGGCAAAGAGCTTATCTGATTGTCTTGGGATATCAAGTGATGCAAATGTTGAAATAGAGAAGGGAGTCCATATATCTGACCATGAAATTGATGGTTCCAAAGATGAAAATGTGCCAGAAAGGGTAGGGATTGGTCATTTCTCTTCGACTGGTTGTACAAAGGATGATAATTTGAAACAACCATCTTCCGTGATTTCTACTGTCAGAAATTCAATACTTGAGGGAGACATTCATGCTGAAGGAACTTCCAGAGTAACGTCATGTCGTAATGGACTTGATAATAATGAGGAGAGTGAAGCTTCTGCACCTTTTACGGTAGGAAACCCTTCTGTAAAGAAAAGTTCCGTGAAAAGTGATGTTTGCTCAGACAGTGAACAACCCAGTCAAACAAAAGTTGATGGTTTTGTAGATGGGAAAATGGATGGATATCCACCAAGCATCGGTGAAATTGAAGTCAAGTCTTCAGTGCAGATGACCTTCCATGATAAGCAATGTAAATCCGAGTCTTCTTCTTCCAACTCAGCACAAGTCACTCTTCCAGCTTCTTCAAAGGATAGCTGTCAGGAGATGTCAGTCTGCAAAAGCTCATATGAGAATATCACACCTAGCGCCGTAGACACTTCAACTTGTACAAACTTTAAGCTTGAACAGCCTGCATGTAGAAGTTTAGTACCAGATATGGCCGTGCATGTGCCAAAATATCAGCTGGATGCTACCATGGTTTCATCCGAGGAACAATGCAATGACAATAAAGCTTCAGAGCCAATTGATAATGTCAGAACAAGGGGTAGCGGTAAGGTGCTTGGTTTGACCCCTGTTAATAGATGGGTGAGTGGAGAGAATATTAATCATTTGAAGTCTGATGTCCCTAAGAAGAAAATTACAGAGCGTTATAATAAAATTAGATCAGAGACTTGCTATGACCTGGTTGATGATGATGCACTTGAGGTGGCTTGGAGAGTTGCAAAAGAAGTAGAGCAGGAGGTTGAGGCTTCAGGAAGCTCCTCTTCAATACCAGGGAGAAGTAGCAAGGTGGTTCATCTCAGCTCCGTGGATTCAGCAGGTTCTCATAGAGAAGGCTGCTTAACAGAAAGTGGTTCTATACACCAGAAGTGCAATGAGTCTGATAGTTTCTGTTCCACTAAAGAGACTATGGATATAAAACCGGTGACAAAGAAGGAACAGTTGTCTTTGGATGTCAAAGAGCCGGTTCAAGGCTTGGTCCCTGGAACTAGTGATGGCTGTCAGAGGCAGGGATCATCCAGCTTTGCTACTAAAGTTGAAGGTGTAGCTGCCAGTCACCAGACTTCTCATGTTTTTGGTATTGATCTTAATGAAGATATCCTGGAAAGTGAAGAAGAGTATCCTCAGAAGTCCATCAAAGAAACTGTATCTCTTCTTGAAAATGTGTCAAAGCCAATACCTGTTCTGGCTAAATCTGGAATTCCATTGTGCTTACCTGTGCCACAATTTCAAAGTGAATGGGACCTAGGTGGTTGGAGGGGTTCAGCTGCAACTAGTGCTTTTAAACCAACTTCTTTTTCTGAGAGTTGTAATAGAAATGCATTGTCGACGAATGACACTAATTGCAGCTCGAACTATTCACATGTTAAAGGGATTGACCTCAATGTTGCTGCTGCTGGTGCTGAGTTTGATGTTGAATTACCCTCCAAGAAACCTATCCCAGCACTGTCTGGTAATTATTCAAAAGATTCATCTGTTGAAGTGAATTCAAGACGAGCAAGGATGCTTGACATTGATCTCAACTGTGTTAGTGAAAATGGTGACAGCTCCCGACAATTGTCTCCACCAGCTTCTGTTAGGGATTTTGATTTGAATGACAACCTAACTTCTGCAGATGCATGCATTGGTCCGTACCAGACATGTGTAGGCTCTTTAGGCTTGAGAAATGGGGATTTAGATGATCCAGCGGTCTCTTCTGTGGAATATTCAAGACAATCAGACTGTAAAACTATCAGATCTTCATGTTCTCAGGACTTGAGTTCAAGGGGGGGCTTTAGTCATAGTCATGACAAACCCTTTCTCGTTGCTGCAACCAATATGGTTCCCTCAAATGAACAACTGCAGAGGATGGCTGCCTTGCAACAGAAGGTCGCCTTTTCACCACCACCACCACCACCTCACGCCTTTCTCTATAATAATGGATTCTGCATTGACCCGAACAACAGCTTATCCCCAACTGTTTACCCTCCTTCCTTCCTTCCATATATGACAGATCCACGTGCAACCACTGTAATCCCACAATATTTTGGTTCTGGTGCTGTTCCTGTGTTTCCGATGGCCCCACATCTAATGGGGGTTCCTCATGCATCATCCCCTAATGACATTGCTTTCATCAGGCCAACTTTTGATCTAAACATGGGAGCAAATTCTTTGGAGAATGGGAGCAGGGGGATGAATGCTAGACAACTTTCTATTCCTGTAAGTGATGCAATTATGGAAGAACAAATGAAATCTTTCCAACAAGTTGGTTTGACTGCTGTACCCATGAAGAGGAGGGAGCCAGATGGGGGATGGGACTCCCATCAGCTTTGCTTTAGACAGGCCGCTTCTTGGCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

878

Amino Acids

94.64

Weight (kDa)

5.09

Isoelectric Point (pI)

53.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012628)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g32010 FvH4_5g32010
prunus_persica	Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0228011
rosa_laevigata	RLG00000001596
rosa_multiflora	Rmu_sc0015384.1_g000001 Rmu_sc0018857.1_g000005
rosa_roxburghii	Rroxscaffold_3G00231650
rosa_rugosa	Rorug07G0244900 Rorug07G0245000 Rorug07G0245100 Rorug07G0245200
rosa_samantha	Rh7AG398900 Rh7BG380300 Rh7CG417000 Rh7DG394500
rosa_wichuraiana	Rw7G033160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	948
Acc36I	ACCTGC	1 cut(s)	1106
AccB1I	GGYRCC	1 cut(s)	18
AccI	GTMKAC	2 cut(s)	669, 1625
AciI	CCGC	3 cut(s)	846, 1985, 2622
AclWI	GGATC	3 cut(s)	1318, 1973, 2285
AcoI	YGGCCR	1 cut(s)	735
AcsI	RAATTY	4 cut(s)	262, 1497, 1783, 2443
AcuI	CTGAAG	4 cut(s)	312, 501, 795, 1032
AcvI	CACGTG	1 cut(s)	2297
AfaI	GTAC	5 cut(s)	211, 685, 726, 1931, 2559
AfiI	CCNNNNNNNGG	5 cut(s)	494, 1268, 2568, 2585, 2628
AflIII	ACRYGT	2 cut(s)	1660, 1937
AgeI	ACCGGT	1 cut(s)	1219
AhlI	ACTAGT	2 cut(s)	1286, 1571
AjnI	CCWGG	4 cut(s)	978, 1069, 1279, 1398
AjuI	GAANNNNNNNTTGG	3 cut(s)	29, 1579, 1611
Alw26I	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
AlwI	GGATC	3 cut(s)	1318, 1973, 2285
AlwNI	CAGNNNCTG	1 cut(s)	1871
AoxI	GGCC	4 cut(s)	735, 2355, 2414, 2619
ApeKI	GCWGC	8 cut(s)	1134, 1346, 1565, 1644, 1688, 1691, 2105, 2150
ApoI	RAATTY	4 cut(s)	262, 1497, 1783, 2443
AseI	ATTAAT	1 cut(s)	900
AsiGI	ACCGGT	1 cut(s)	1219
Asp700I	GAANNNNTTC	2 cut(s)	379, 2531
AspA2I	CCTAGG	1 cut(s)	1543
AspLEI	GCGC	1 cut(s)	665
AspS9I	GGNCC	4 cut(s)	1276, 1540, 1925, 2356
AsuHPI	GGTGA	6 cut(s)	509, 895, 1234, 1346, 1850, 2169
AvaII	GGWCC	3 cut(s)	1276, 1540, 1925
AvrII	CCTAGG	1 cut(s)	1543
BaeGI	GKGCMC	1 cut(s)	21
BaeI	ACNNNNGTAYC	2 cut(s)	2541, 2574
BanI	GGYRCC	1 cut(s)	18
BbrPI	CACGTG	1 cut(s)	2297
BbsI	GAAGAC	3 cut(s)	12, 507, 552
BbvI	GCAGC	8 cut(s)	1121, 1333, 1552, 1656, 1675, 1678, 2092, 2137
BceAI	ACGGC	2 cut(s)	650, 722
BciT130I	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BciVI	GTATCC	1 cut(s)	1428
BcoDI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BcuI	ACTAGT	2 cut(s)	1286, 1571
BfaI	CTAG	5 cut(s)	660, 1287, 1544, 1572, 2478
BfmI	CTRYAG	2 cut(s)	1908, 2138
BfoI	RGCGCY	1 cut(s)	666
BfuAI	ACCTGC	1 cut(s)	1106
BfuI	GTATCC	1 cut(s)	1428
BglII	AGATCT	1 cut(s)	2033
BisI	GCNGC	9 cut(s)	1135, 1347, 1566, 1645, 1689, 1692, 2106, 2151, 2622
BlnI	CCTAGG	1 cut(s)	1543
BlsI	GCNGC	9 cut(s)	1136, 1348, 1567, 1646, 1690, 1693, 2107, 2152, 2623
Bme1390I	CCNGG	4 cut(s)	980, 1071, 1281, 1400
Bme18I	GGWCC	3 cut(s)	1276, 1540, 1925
BmgT120I	GGNCC	4 cut(s)	1276, 1540, 1925, 2356
BmiI	GGNNCC	8 cut(s)	20, 151, 1278, 1541, 2121, 2358, 2376, 2577
BmrFI	CCNGG	4 cut(s)	980, 1071, 1281, 1400
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	8 cut(s)	85, 501, 754, 982, 1791, 1903, 2393, 2494
BmuI	ACTGGG	1 cut(s)	429
BoxI	GACNNNNGTC	1 cut(s)	1855
BpiI	GAAGAC	3 cut(s)	12, 507, 552
BpuEI	CTTGAG	4 cut(s)	293, 1019, 1978, 2074
BsaAI	YACGTR	1 cut(s)	2297
BsaBI	GATNNNNATC	1 cut(s)	480
BsaI	GGTCTC	1 cut(s)	1993
BsaJI	CCNNGG	7 cut(s)	22, 771, 783, 1070, 1104, 1279, 1543
BsaWI	WCCGGW	1 cut(s)	1219
Bsc4I	CCNNNNNNNGG	5 cut(s)	494, 1268, 2568, 2585, 2628
Bse118I	RCCGGY	2 cut(s)	1219, 1261
Bse1I	ACTGG	3 cut(s)	208, 435, 1350
Bse3DI	GCAATG	4 cut(s)	551, 802, 1177, 2400
Bse8I	GATNNNNATC	1 cut(s)	480
BseBI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BseDI	CCNNGG	7 cut(s)	22, 771, 783, 1070, 1104, 1279, 1543
BseJI	GATNNNNATC	1 cut(s)	480
BseLI	CCNNNNNNNGG	5 cut(s)	494, 1268, 2568, 2585, 2628
BseMI	GCAATG	4 cut(s)	551, 802, 1177, 2400
BseMII	CTCAG	7 cut(s)	432, 588, 1111, 1436, 1590, 1692, 2060
BseNI	ACTGG	3 cut(s)	208, 435, 1350
BseRI	GAGGAG	3 cut(s)	356, 1048, 2584
BseSI	GKGCMC	1 cut(s)	21
BseXI	GCAGC	8 cut(s)	1121, 1333, 1552, 1656, 1675, 1678, 2092, 2137
BseYI	CCCAGC	1 cut(s)	1738
BsgI	GTGCAG	2 cut(s)	342, 542
BshFI	GGCC	4 cut(s)	737, 2357, 2416, 2621
BshNI	GGYRCC	1 cut(s)	18
BshTI	ACCGGT	1 cut(s)	1219
BsiSI	CCGG	2 cut(s)	1220, 1262
BslFI	GGGAC	4 cut(s)	905, 1262, 1553, 2606
BslI	CCNNNNNNNGG	5 cut(s)	494, 1268, 2568, 2585, 2628
BsmAI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BsmFI	GGGAC	4 cut(s)	905, 1262, 1553, 2606
BsmI	GAATGC	1 cut(s)	2479
BsnI	GGCC	4 cut(s)	737, 2357, 2416, 2621
Bso31I	GGTCTC	1 cut(s)	1993
Bsp1286I	GDGCHC	1 cut(s)	21
Bsp1407I	TGTACA	2 cut(s)	209, 683
Bsp143I	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	3 cut(s)	846, 1985, 2622
BspANI	GGCC	4 cut(s)	737, 2357, 2416, 2621
BspCNI	CTCAG	7 cut(s)	431, 587, 1110, 1435, 1591, 1693, 2059
BspHI	TCATGA	1 cut(s)	2083
BspLI	GGNNCC	8 cut(s)	20, 151, 1278, 1541, 2121, 2358, 2376, 2577
BspMAI	CTGCAG	2 cut(s)	1912, 2142
BspMI	ACCTGC	1 cut(s)	1106
BspPI	GGATC	3 cut(s)	1318, 1973, 2285
BspT107I	GGYRCC	1 cut(s)	18
BspTNI	GGTCTC	1 cut(s)	1993
BsrDI	GCAATG	4 cut(s)	551, 802, 1177, 2400
BsrFI	RCCGGY	2 cut(s)	1219, 1261
BsrGI	TGTACA	2 cut(s)	209, 683
BsrI	ACTGG	3 cut(s)	208, 435, 1350
BssAI	RCCGGY	2 cut(s)	1219, 1261
BssECI	CCNNGG	7 cut(s)	22, 771, 783, 1070, 1104, 1279, 1543
BssMI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
BssT1I	CCWWGG	3 cut(s)	22, 771, 1543
Bst2UI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
Bst6I	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2561
BstAPI	GCANNNNNTGC	1 cut(s)	1574
BstAUI	TGTACA	2 cut(s)	209, 683
BstBAI	YACGTR	1 cut(s)	2297
BstC8I	GCNNGC	2 cut(s)	708, 1918
BstDEI	CTNAG	8 cut(s)	418, 574, 924, 1097, 1422, 1599, 1701, 2046
BstDSI	CCRYGG	2 cut(s)	771, 1104
BstH2I	RGCGCY	1 cut(s)	666
BstHHI	GCGC	1 cut(s)	665
BstKTI	GATC	8 cut(s)	962, 1313, 1384, 1816, 1981, 2036, 2293, 2428
BstMAI	GTCTC	5 cut(s)	273, 959, 1196, 1863, 1993
BstMBI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
BstMWI	GCNNNNNNNGC	4 cut(s)	703, 1574, 1697, 1953
BstNI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
BstNSI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
BstPAI	GACNNNNGTC	1 cut(s)	1855
BstSCI	CCNGG	4 cut(s)	978, 1069, 1279, 1398
BstSFI	CTRYAG	2 cut(s)	1908, 2138
BstSLI	GKGCMC	1 cut(s)	21
BstV1I	GCAGC	8 cut(s)	1121, 1333, 1552, 1656, 1675, 1678, 2092, 2137
BstV2I	GAAGAC	3 cut(s)	12, 507, 552
BstX2I	RGATCY	2 cut(s)	2033, 2290
BstXI	CCANNNNNNTGG	1 cut(s)	2543
BstYI	RGATCY	2 cut(s)	2033, 2290
BsuI	GTATCC	1 cut(s)	1428
BsuRI	GGCC	4 cut(s)	737, 2357, 2416, 2621
BtgI	CCRYGG	2 cut(s)	771, 1104
BtsIMutI	CAGTG	4 cut(s)	430, 525, 1742, 2304
BveI	ACCTGC	1 cut(s)	1106
Cac8I	GCNNGC	2 cut(s)	708, 1918
CaiI	CAGNNNCTG	1 cut(s)	1871
CciI	TCATGA	1 cut(s)	2083
CfoI	GCGC	1 cut(s)	665
Cfr10I	RCCGGY	2 cut(s)	1219, 1261
Cfr13I	GGNCC	4 cut(s)	1276, 1540, 1925, 2356
CsiI	ACCWGGT	1 cut(s)	978
Csp6I	GTAC	5 cut(s)	210, 684, 725, 1930, 2558
CspAI	ACCGGT	1 cut(s)	1219
CviQI	GTAC	5 cut(s)	210, 684, 725, 1930, 2558
DdeI	CTNAG	8 cut(s)	418, 574, 924, 1097, 1422, 1599, 1701, 2046
DpnI	GATC	8 cut(s)	961, 1312, 1383, 1815, 1980, 2035, 2292, 2427
DpnII	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
DraI	TTTAAA	1 cut(s)	1582
EaeI	YGGCCR	1 cut(s)	735
Eam1104I	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2561
EarI	CTCTTC	7 cut(s)	202, 594, 1066, 1407, 1455, 1996, 2561
Eco130I	CCWWGG	3 cut(s)	22, 771, 1543
Eco31I	GGTCTC	1 cut(s)	1993
Eco32I	GATATC	3 cut(s)	87, 482, 1396
Eco47I	GGWCC	3 cut(s)	1276, 1540, 1925
Eco57I	CTGAAG	4 cut(s)	312, 501, 795, 1032
Eco72I	CACGTG	1 cut(s)	2297
EcoO109I	RGGNCCY	1 cut(s)	1540
EcoRI	GAATTC	2 cut(s)	1497, 1783
EcoRII	CCWGG	4 cut(s)	978, 1069, 1279, 1398
EcoRV	GATATC	3 cut(s)	87, 482, 1396
EcoT14I	CCWWGG	3 cut(s)	22, 771, 1543
EcoT22I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2386
ErhI	CCWWGG	3 cut(s)	22, 771, 1543
FalI	AAGNNNNNCTT	6 cut(s)	573, 605, 1045, 1077, 2156, 2188
FaqI	GGGAC	4 cut(s)	905, 1262, 1553, 2606
FauNDI	CATATG	1 cut(s)	643
FblI	GTMKAC	2 cut(s)	669, 1625
Fnu4HI	GCNGC	9 cut(s)	1135, 1347, 1566, 1645, 1689, 1692, 2106, 2151, 2622
Fsp4HI	GCNGC	9 cut(s)	1135, 1347, 1566, 1645, 1689, 1692, 2106, 2151, 2622
FspBI	CTAG	5 cut(s)	660, 1287, 1544, 1572, 2478
GlaI	GCGC	1 cut(s)	664
GluI	GCNGC	9 cut(s)	1135, 1347, 1566, 1645, 1689, 1692, 2106, 2151, 2622
GsaI	CCCAGC	1 cut(s)	1742
HaeII	RGCGCY	1 cut(s)	666
HaeIII	GGCC	4 cut(s)	737, 2357, 2416, 2621
HapII	CCGG	2 cut(s)	1220, 1262
HhaI	GCGC	1 cut(s)	665
Hin6I	GCGC	1 cut(s)	663
HinP1I	GCGC	1 cut(s)	663
HincII	GTYRAC	1 cut(s)	1626
HindII	GTYRAC	1 cut(s)	1626
HindIII	AAGCTT	3 cut(s)	351, 695, 807
HinfI	GANTC	7 cut(s)	120, 557, 1109, 1175, 1766, 2220, 2594
HpaII	CCGG	2 cut(s)	1220, 1262
HphI	GGTGA	6 cut(s)	509, 895, 1234, 1346, 1850, 2169
Hpy166II	GTNNAC	4 cut(s)	428, 670, 1626, 2260
Hpy8I	GTNNAC	4 cut(s)	428, 670, 1626, 2260
Hpy99I	CGWCG	1 cut(s)	1630
HpyCH4IV	ACGT	2 cut(s)	311, 2296
HpyF10VI	GCNNNNNNNGC	4 cut(s)	703, 1574, 1697, 1953
HpyF3I	CTNAG	8 cut(s)	418, 574, 924, 1097, 1422, 1599, 1701, 2046
HpySE526I	ACGT	2 cut(s)	311, 2296
HspAI	GCGC	1 cut(s)	663
Kzo9I	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
LmnI	GCTCC	6 cut(s)	1061, 1106, 1850, 2438, 2460, 2575
Lsp1109I	GCAGC	8 cut(s)	1121, 1333, 1552, 1656, 1675, 1678, 2092, 2137
LweI	GCATC	8 cut(s)	85, 501, 754, 982, 1791, 1903, 2393, 2494
MabI	ACCWGGT	1 cut(s)	978
MaeI	CTAG	5 cut(s)	660, 1287, 1544, 1572, 2478
MaeII	ACGT	2 cut(s)	311, 2296
MaeIII	GTNAC	5 cut(s)	307, 583, 1222, 1352, 1838
MalI	GATC	8 cut(s)	961, 1312, 1383, 1815, 1980, 2035, 2292, 2427
MboI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
MfeI	CAATTG	2 cut(s)	819, 1853
MflI	RGATCY	2 cut(s)	2033, 2290
MhlI	GDGCHC	1 cut(s)	21
MlyI	GAGTC	4 cut(s)	129, 566, 1184, 2588
MmeI	TCCRAC	3 cut(s)	594, 1532, 2560
Mph1103I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2386
MroXI	GAANNNNTTC	2 cut(s)	379, 2531
MseI	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
MslI	CAYNNNNRTG	1 cut(s)	2082
MspA1I	CMGCKG	3 cut(s)	760, 1565, 1985
MspI	CCGG	2 cut(s)	1220, 1262
MspR9I	CCNGG	4 cut(s)	980, 1071, 1281, 1400
MunI	CAATTG	2 cut(s)	819, 1853
Mva1269I	GAATGC	1 cut(s)	2479
MvaI	CCWGG	4 cut(s)	980, 1071, 1281, 1400
MwoI	GCNNNNNNNGC	4 cut(s)	703, 1574, 1697, 1953
NcoI	CCATGG	1 cut(s)	771
NdeI	CATATG	1 cut(s)	643
NdeII	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
NlaIV	GGNNCC	8 cut(s)	20, 151, 1278, 1541, 2121, 2358, 2376, 2577
NmuCI	GTSAC	4 cut(s)	583, 1222, 1352, 1838
NsiI	ATGCAT	4 cut(s)	1621, 1918, 1922, 2386
NspI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
PaeI	GCATGC	1 cut(s)	1920
PagI	TCATGA	1 cut(s)	2083
PciI	ACATGT	2 cut(s)	1660, 1937
PctI	GAATGC	1 cut(s)	2479
PdmI	GAANNNNTTC	2 cut(s)	379, 2531
PfeI	GAWTC	3 cut(s)	1109, 1766, 2220
PfoI	TCCNGGA	1 cut(s)	1398
PinAI	ACCGGT	1 cut(s)	1219
PkrI	GCNGC	9 cut(s)	1136, 1348, 1567, 1646, 1690, 1693, 2107, 2152, 2623
PleI	GAGTC	4 cut(s)	128, 565, 1183, 2588
PmaCI	CACGTG	1 cut(s)	2297
PmlI	CACGTG	1 cut(s)	2297
PpsI	GAGTC	4 cut(s)	128, 565, 1183, 2588
Ppu21I	YACGTR	1 cut(s)	2297
PpuMI	RGGWCCY	1 cut(s)	1540
PscI	ACATGT	2 cut(s)	1660, 1937
PshAI	GACNNNNGTC	1 cut(s)	1855
PshBI	ATTAAT	1 cut(s)	900
PsiI	TTATAA	1 cut(s)	948
Psp5II	RGGWCCY	1 cut(s)	1540
Psp6I	CCWGG	4 cut(s)	978, 1069, 1279, 1398
PspCI	CACGTG	1 cut(s)	2297
PspFI	CCCAGC	1 cut(s)	1738
PspGI	CCWGG	4 cut(s)	978, 1069, 1279, 1398
PspN4I	GGNNCC	8 cut(s)	20, 151, 1278, 1541, 2121, 2358, 2376, 2577
PspPI	GGNCC	4 cut(s)	1276, 1540, 1925, 2356
PspPPI	RGGWCCY	1 cut(s)	1540
PstI	CTGCAG	2 cut(s)	1912, 2142
PstNI	CAGNNNCTG	1 cut(s)	1871
PsuI	RGATCY	2 cut(s)	2033, 2290
PvuII	CAGCTG	2 cut(s)	760, 1565
RsaI	GTAC	5 cut(s)	211, 685, 726, 1931, 2559
RsaNI	GTAC	5 cut(s)	210, 684, 725, 1930, 2558
RseI	CAYNNNNRTG	1 cut(s)	2082
SalI	GTCGAC	1 cut(s)	1624
SaqAI	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
SatI	GCNGC	9 cut(s)	1135, 1347, 1566, 1645, 1689, 1692, 2106, 2151, 2622
Sau3AI	GATC	8 cut(s)	959, 1310, 1381, 1813, 1978, 2033, 2290, 2425
Sau96I	GGNCC	4 cut(s)	1276, 1540, 1925, 2356
SchI	GAGTC	4 cut(s)	129, 566, 1184, 2588
ScrFI	CCNGG	4 cut(s)	980, 1071, 1281, 1400
SduI	GDGCHC	1 cut(s)	21
SexAI	ACCWGGT	1 cut(s)	978
SfaNI	GCATC	8 cut(s)	85, 501, 754, 982, 1791, 1903, 2393, 2494
SfcI	CTRYAG	2 cut(s)	1908, 2138
SinI	GGWCC	3 cut(s)	1276, 1540, 1925
SmiMI	CAYNNNNRTG	1 cut(s)	2082
SmlI	CTYRAG	4 cut(s)	272, 998, 1957, 2053
SmoI	CTYRAG	4 cut(s)	272, 998, 1957, 2053
SpeI	ACTAGT	2 cut(s)	1286, 1571
SphI	GCATGC	1 cut(s)	1920
SsiI	CCGC	3 cut(s)	846, 1985, 2622
SspI	AATATT	3 cut(s)	898, 2003, 2321
SspMI	CTAG	5 cut(s)	660, 1287, 1544, 1572, 2478
StyD4I	CCNGG	4 cut(s)	978, 1069, 1279, 1398
StyI	CCWWGG	3 cut(s)	22, 771, 1543
TaiI	ACGT	2 cut(s)	314, 2299
TaqI	TCGA	3 cut(s)	200, 1625, 1649
TatI	WGTACW	2 cut(s)	209, 683
TauI	GCSGC	1 cut(s)	2624
TfiI	GAWTC	3 cut(s)	1109, 1766, 2220
Tru1I	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
Tru9I	TTAA	7 cut(s)	693, 873, 900, 1139, 1386, 1581, 1665
TscAI	CASTG	4 cut(s)	430, 525, 1749, 2311
TseFI	GTSAC	4 cut(s)	583, 1222, 1352, 1838
TseI	GCWGC	8 cut(s)	1134, 1346, 1565, 1644, 1688, 1691, 2105, 2150
Tsp45I	GTSAC	4 cut(s)	583, 1222, 1352, 1838
TspGWI	ACGGA	4 cut(s)	232, 388, 1093, 1917
TspRI	CASTG	4 cut(s)	430, 525, 1749, 2311
VpaK11BI	GGWCC	3 cut(s)	1276, 1540, 1925
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	4 cut(s)	262, 1497, 1783, 2443
XceI	RCATGY	5 cut(s)	714, 746, 1664, 1920, 1941
XcmI	CCANNNNNNNNNTGG	2 cut(s)	143, 2586
XmaJI	CCTAGG	1 cut(s)	1543
XmiI	GTMKAC	2 cut(s)	669, 1625
XmnI	GAANNNNTTC	2 cut(s)	379, 2531
XspI	CTAG	5 cut(s)	660, 1287, 1544, 1572, 2478
Zsp2I	ATGCAT	4 cut(s)	1621, 1918, 1922, 2386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.