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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g32010 FvH4_5g32010 |
| prunus_persica | Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0228011 |
| rosa_laevigata | RLG00000001596 |
| rosa_multiflora | Rmu_sc0015384.1_g000001 Rmu_sc0018857.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00231650 |
| rosa_rugosa | Rorug07G0244900 Rorug07G0245000 Rorug07G0245100 Rorug07G0245200 |
| rosa_samantha | Rh7AG398900 Rh7BG380300 Rh7CG417000 Rh7DG394500 |
| rosa_wichuraiana | Rw7G033160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1218 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 705 |
| Acc36I | ACCTGC | 1 cut(s) | 1376 |
| AccB1I | GGYRCC | 1 cut(s) | 288 |
| AccI | GTMKAC | 4 cut(s) | 45, 243, 939, 1895 |
| AccIII | TCCGGA | 1 cut(s) | 56 |
| AciI | CCGC | 3 cut(s) | 1116, 2255, 2886 |
| AclWI | GGATC | 3 cut(s) | 207, 1588, 2549 |
| AcoI | YGGCCR | 1 cut(s) | 1005 |
| AcsI | RAATTY | 4 cut(s) | 532, 1767, 2053, 2707 |
| AcuI | CTGAAG | 4 cut(s) | 582, 771, 1065, 1302 |
| AcvI | CACGTG | 1 cut(s) | 2561 |
| AdeI | CACNNNGTG | 1 cut(s) | 932 |
| AfaI | GTAC | 7 cut(s) | 253, 481, 540, 955, 996, 2201, 2823 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 229, 1538, 2832, 2849, 2892 |
| AflIII | ACRYGT | 2 cut(s) | 1930, 2207 |
| AhlI | ACTAGT | 2 cut(s) | 1556, 1841 |
| AjnI | CCWGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 267, 299, 1849, 1881 |
| Alw26I | GTCTC | 5 cut(s) | 543, 1229, 1466, 2133, 2263 |
| AlwI | GGATC | 3 cut(s) | 207, 1588, 2549 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2141 |
| Aor13HI | TCCGGA | 1 cut(s) | 56 |
| AoxI | GGCC | 3 cut(s) | 1005, 2619, 2678 |
| ApeKI | GCWGC | 8 cut(s) | 1404, 1616, 1835, 1914, 1958, 1961, 2375, 2420 |
| ApoI | RAATTY | 4 cut(s) | 532, 1767, 2053, 2707 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 762, 794 |
| AseI | ATTAAT | 1 cut(s) | 1170 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 649, 2795 |
| AspA2I | CCTAGG | 1 cut(s) | 1813 |
| AspS9I | GGNCC | 4 cut(s) | 1546, 1810, 2195, 2620 |
| AsuHPI | GGTGA | 6 cut(s) | 97, 1165, 1616, 2111, 2120, 2439 |
| AvaII | GGWCC | 3 cut(s) | 1546, 1810, 2195 |
| AvrII | CCTAGG | 1 cut(s) | 1813 |
| BaeGI | GKGCMC | 1 cut(s) | 291 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2805, 2838 |
| BanI | GGYRCC | 1 cut(s) | 288 |
| BbrPI | CACGTG | 1 cut(s) | 2561 |
| BbsI | GAAGAC | 4 cut(s) | 282, 501, 777, 822 |
| BbvI | GCAGC | 8 cut(s) | 1391, 1603, 1822, 1926, 1945, 1948, 2362, 2407 |
| BceAI | ACGGC | 2 cut(s) | 920, 992 |
| BciT130I | CCWGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| BciVI | GTATCC | 1 cut(s) | 1698 |
| BclI | TGATCA | 1 cut(s) | 75 |
| BcoDI | GTCTC | 5 cut(s) | 543, 1229, 1466, 2133, 2263 |
| BcuI | ACTAGT | 2 cut(s) | 1556, 1841 |
| BfaI | CTAG | 6 cut(s) | 930, 1557, 1814, 1842, 2252, 2742 |
| BfmI | CTRYAG | 4 cut(s) | 128, 224, 2178, 2408 |
| BfuAI | ACCTGC | 1 cut(s) | 1376 |
| BfuI | GTATCC | 1 cut(s) | 1698 |
| BglII | AGATCT | 1 cut(s) | 2303 |
| BisI | GCNGC | 9 cut(s) | 1405, 1617, 1836, 1915, 1959, 1962, 2376, 2421, 2886 |
| BlnI | CCTAGG | 1 cut(s) | 1813 |
| BlsI | GCNGC | 9 cut(s) | 1406, 1618, 1837, 1916, 1960, 1963, 2377, 2422, 2887 |
| BmcAI | AGTACT | 1 cut(s) | 540 |
| Bme1390I | CCNGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| Bme18I | GGWCC | 3 cut(s) | 1546, 1810, 2195 |
| BmgT120I | GGNCC | 4 cut(s) | 1546, 1810, 2195, 2620 |
| BmiI | GGNNCC | 9 cut(s) | 61, 290, 421, 1548, 1811, 2391, 2622, 2640, 2841 |
| BmrFI | CCNGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| BmrI | ACTGGG | 1 cut(s) | 699 |
| BmsI | GCATC | 7 cut(s) | 355, 1024, 1252, 2061, 2173, 2657, 2758 |
| BmuI | ACTGGG | 1 cut(s) | 699 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2125 |
| BpiI | GAAGAC | 4 cut(s) | 282, 501, 777, 822 |
| BpuEI | CTTGAG | 4 cut(s) | 563, 1289, 2248, 2344 |
| BsaAI | YACGTR | 1 cut(s) | 2561 |
| BsaBI | GATNNNNATC | 2 cut(s) | 80, 750 |
| BsaI | GGTCTC | 1 cut(s) | 2263 |
| BsaJI | CCNNGG | 5 cut(s) | 292, 1041, 1340, 1549, 1813 |
| BsaWI | WCCGGW | 2 cut(s) | 56, 2605 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 9, 39 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 229, 1538, 2832, 2849, 2892 |
| Bse1I | ACTGG | 5 cut(s) | 478, 705, 1490, 1532, 1620 |
| Bse3DI | GCAATG | 3 cut(s) | 821, 1447, 2664 |
| Bse8I | GATNNNNATC | 2 cut(s) | 80, 750 |
| BseAI | TCCGGA | 1 cut(s) | 56 |
| BseBI | CCWGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| BseDI | CCNNGG | 5 cut(s) | 292, 1041, 1340, 1549, 1813 |
| BseJI | GATNNNNATC | 2 cut(s) | 80, 750 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 229, 1538, 2832, 2849, 2892 |
| BseMI | GCAATG | 3 cut(s) | 821, 1447, 2664 |
| BseMII | CTCAG | 8 cut(s) | 702, 858, 1044, 1381, 1706, 1860, 1962, 2330 |
| BseNI | ACTGG | 5 cut(s) | 478, 705, 1490, 1532, 1620 |
| BseRI | GAGGAG | 4 cut(s) | 223, 626, 1318, 2848 |
| BseSI | GKGCMC | 1 cut(s) | 291 |
| BseXI | GCAGC | 8 cut(s) | 1391, 1603, 1822, 1926, 1945, 1948, 2362, 2407 |
| BseYI | CCCAGC | 1 cut(s) | 2008 |
| BsgI | GTGCAG | 3 cut(s) | 612, 812, 2232 |
| BshFI | GGCC | 3 cut(s) | 1007, 2621, 2680 |
| BshNI | GGYRCC | 1 cut(s) | 288 |
| BsiSI | CCGG | 3 cut(s) | 57, 230, 2606 |
| BslFI | GGGAC | 4 cut(s) | 1175, 1532, 1823, 2870 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 229, 1538, 2832, 2849, 2892 |
| BsmAI | GTCTC | 5 cut(s) | 543, 1229, 1466, 2133, 2263 |
| BsmFI | GGGAC | 4 cut(s) | 1175, 1532, 1823, 2870 |
| BsmI | GAATGC | 1 cut(s) | 2743 |
| BsnI | GGCC | 3 cut(s) | 1007, 2621, 2680 |
| Bso31I | GGTCTC | 1 cut(s) | 2263 |
| Bsp1286I | GDGCHC | 1 cut(s) | 291 |
| Bsp13I | TCCGGA | 1 cut(s) | 56 |
| Bsp1407I | TGTACA | 2 cut(s) | 479, 953 |
| Bsp19I | CCATGG | 1 cut(s) | 1041 |
| BspACI | CCGC | 3 cut(s) | 1116, 2255, 2886 |
| BspANI | GGCC | 3 cut(s) | 1007, 2621, 2680 |
| BspCNI | CTCAG | 8 cut(s) | 701, 857, 1045, 1380, 1705, 1861, 1963, 2329 |
| BspEI | TCCGGA | 1 cut(s) | 56 |
| BspHI | TCATGA | 1 cut(s) | 2353 |
| BspLI | GGNNCC | 9 cut(s) | 61, 290, 421, 1548, 1811, 2391, 2622, 2640, 2841 |
| BspMAI | CTGCAG | 2 cut(s) | 2182, 2412 |
| BspMI | ACCTGC | 1 cut(s) | 1376 |
| BspPI | GGATC | 3 cut(s) | 207, 1588, 2549 |
| BspT107I | GGYRCC | 1 cut(s) | 288 |
| BspTNI | GGTCTC | 1 cut(s) | 2263 |
| BsrDI | GCAATG | 3 cut(s) | 821, 1447, 2664 |
| BsrGI | TGTACA | 2 cut(s) | 479, 953 |
| BsrI | ACTGG | 5 cut(s) | 478, 705, 1490, 1532, 1620 |
| BssECI | CCNNGG | 5 cut(s) | 292, 1041, 1340, 1549, 1813 |
| BssT1I | CCWWGG | 3 cut(s) | 292, 1041, 1813 |
| Bst2UI | CCWGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| Bst6I | CTCTTC | 7 cut(s) | 472, 864, 1336, 1677, 1725, 2266, 2825 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1844 |
| BstAUI | TGTACA | 2 cut(s) | 479, 953 |
| BstBAI | YACGTR | 1 cut(s) | 2561 |
| BstC8I | GCNNGC | 5 cut(s) | 6, 795, 978, 2188, 2215 |
| BstDEI | CTNAG | 9 cut(s) | 688, 844, 1053, 1194, 1367, 1692, 1869, 1971, 2316 |
| BstDSI | CCRYGG | 1 cut(s) | 1041 |
| BstMAI | GTCTC | 5 cut(s) | 543, 1229, 1466, 2133, 2263 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 973, 1844, 1967, 2223 |
| BstNI | CCWGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| BstNSI | RCATGY | 5 cut(s) | 984, 1016, 1934, 2190, 2211 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2125 |
| BstSCI | CCNGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| BstSFI | CTRYAG | 4 cut(s) | 128, 224, 2178, 2408 |
| BstSLI | GKGCMC | 1 cut(s) | 291 |
| BstV1I | GCAGC | 8 cut(s) | 1391, 1603, 1822, 1926, 1945, 1948, 2362, 2407 |
| BstV2I | GAAGAC | 4 cut(s) | 282, 501, 777, 822 |
| BstX2I | RGATCY | 3 cut(s) | 212, 2303, 2554 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2807 |
| BstYI | RGATCY | 3 cut(s) | 212, 2303, 2554 |
| BsuI | GTATCC | 1 cut(s) | 1698 |
| BsuRI | GGCC | 3 cut(s) | 1007, 2621, 2680 |
| BtgI | CCRYGG | 1 cut(s) | 1041 |
| BtsI | GCAGTG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 6 cut(s) | 217, 700, 795, 1497, 2012, 2568 |
| BveI | ACCTGC | 1 cut(s) | 1376 |
| Cac8I | GCNNGC | 5 cut(s) | 6, 795, 978, 2188, 2215 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2141 |
| CciI | TCATGA | 1 cut(s) | 2353 |
| Cfr13I | GGNCC | 4 cut(s) | 1546, 1810, 2195, 2620 |
| CseI | GACGC | 1 cut(s) | 751 |
| CsiI | ACCWGGT | 1 cut(s) | 1248 |
| Csp6I | GTAC | 7 cut(s) | 252, 480, 539, 954, 995, 2200, 2822 |
| CviQI | GTAC | 7 cut(s) | 252, 480, 539, 954, 995, 2200, 2822 |
| DdeI | CTNAG | 9 cut(s) | 688, 844, 1053, 1194, 1367, 1692, 1869, 1971, 2316 |
| DraI | TTTAAA | 1 cut(s) | 1852 |
| DraIII | CACNNNGTG | 1 cut(s) | 932 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 705 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 705 |
| EaeI | YGGCCR | 1 cut(s) | 1005 |
| Eam1104I | CTCTTC | 7 cut(s) | 472, 864, 1336, 1677, 1725, 2266, 2825 |
| EarI | CTCTTC | 7 cut(s) | 472, 864, 1336, 1677, 1725, 2266, 2825 |
| Eco130I | CCWWGG | 3 cut(s) | 292, 1041, 1813 |
| Eco31I | GGTCTC | 1 cut(s) | 2263 |
| Eco32I | GATATC | 3 cut(s) | 357, 752, 1666 |
| Eco47I | GGWCC | 3 cut(s) | 1546, 1810, 2195 |
| Eco57I | CTGAAG | 4 cut(s) | 582, 771, 1065, 1302 |
| Eco72I | CACGTG | 1 cut(s) | 2561 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1810 |
| EcoRI | GAATTC | 2 cut(s) | 1767, 2053 |
| EcoRII | CCWGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| EcoRV | GATATC | 3 cut(s) | 357, 752, 1666 |
| EcoT14I | CCWWGG | 3 cut(s) | 292, 1041, 1813 |
| EcoT22I | ATGCAT | 4 cut(s) | 1891, 2188, 2192, 2650 |
| ErhI | CCWWGG | 3 cut(s) | 292, 1041, 1813 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 843, 875, 1315, 1347, 2426, 2458 |
| FaqI | GGGAC | 4 cut(s) | 1175, 1532, 1823, 2870 |
| FauNDI | CATATG | 1 cut(s) | 913 |
| FbaI | TGATCA | 1 cut(s) | 75 |
| FblI | GTMKAC | 4 cut(s) | 45, 243, 939, 1895 |
| Fnu4HI | GCNGC | 9 cut(s) | 1405, 1617, 1836, 1915, 1959, 1962, 2376, 2421, 2886 |
| Fsp4HI | GCNGC | 9 cut(s) | 1405, 1617, 1836, 1915, 1959, 1962, 2376, 2421, 2886 |
| FspBI | CTAG | 6 cut(s) | 930, 1557, 1814, 1842, 2252, 2742 |
| GluI | GCNGC | 9 cut(s) | 1405, 1617, 1836, 1915, 1959, 1962, 2376, 2421, 2886 |
| GsaI | CCCAGC | 1 cut(s) | 2012 |
| HaeIII | GGCC | 3 cut(s) | 1007, 2621, 2680 |
| HapII | CCGG | 3 cut(s) | 57, 230, 2606 |
| HgaI | GACGC | 1 cut(s) | 751 |
| HincII | GTYRAC | 2 cut(s) | 244, 1896 |
| HindII | GTYRAC | 2 cut(s) | 244, 1896 |
| HindIII | AAGCTT | 3 cut(s) | 621, 965, 1077 |
| HinfI | GANTC | 8 cut(s) | 149, 390, 827, 1379, 1445, 2036, 2484, 2858 |
| HpaII | CCGG | 3 cut(s) | 57, 230, 2606 |
| HphI | GGTGA | 6 cut(s) | 97, 1165, 1616, 2111, 2120, 2439 |
| Hpy166II | GTNNAC | 6 cut(s) | 46, 244, 698, 940, 1896, 2524 |
| Hpy8I | GTNNAC | 6 cut(s) | 46, 244, 698, 940, 1896, 2524 |
| HpyCH4IV | ACGT | 3 cut(s) | 48, 581, 2560 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 973, 1844, 1967, 2223 |
| HpyF3I | CTNAG | 9 cut(s) | 688, 844, 1053, 1194, 1367, 1692, 1869, 1971, 2316 |
| HpySE526I | ACGT | 3 cut(s) | 48, 581, 2560 |
| Kpn2I | TCCGGA | 1 cut(s) | 56 |
| Ksp22I | TGATCA | 1 cut(s) | 75 |
| LmnI | GCTCC | 5 cut(s) | 1331, 2120, 2702, 2724, 2839 |
| Lsp1109I | GCAGC | 8 cut(s) | 1391, 1603, 1822, 1926, 1945, 1948, 2362, 2407 |
| LweI | GCATC | 7 cut(s) | 355, 1024, 1252, 2061, 2173, 2657, 2758 |
| MabI | ACCWGGT | 1 cut(s) | 1248 |
| MaeI | CTAG | 6 cut(s) | 930, 1557, 1814, 1842, 2252, 2742 |
| MaeII | ACGT | 3 cut(s) | 48, 581, 2560 |
| MaeIII | GTNAC | 6 cut(s) | 25, 577, 853, 1492, 1622, 2108 |
| MfeI | CAATTG | 2 cut(s) | 1089, 2123 |
| MflI | RGATCY | 3 cut(s) | 212, 2303, 2554 |
| MhlI | GDGCHC | 1 cut(s) | 291 |
| MlyI | GAGTC | 4 cut(s) | 399, 836, 1454, 2852 |
| MmeI | TCCRAC | 3 cut(s) | 864, 1802, 2824 |
| Mph1103I | ATGCAT | 4 cut(s) | 1891, 2188, 2192, 2650 |
| MroI | TCCGGA | 1 cut(s) | 56 |
| MroXI | GAANNNNTTC | 2 cut(s) | 649, 2795 |
| MseI | TTAA | 8 cut(s) | 159, 963, 1143, 1170, 1409, 1656, 1851, 1935 |
| MslI | CAYNNNNRTG | 2 cut(s) | 39, 2352 |
| MspA1I | CMGCKG | 2 cut(s) | 1030, 1835 |
| MspI | CCGG | 3 cut(s) | 57, 230, 2606 |
| MspR9I | CCNGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| MunI | CAATTG | 2 cut(s) | 1089, 2123 |
| Mva1269I | GAATGC | 1 cut(s) | 2743 |
| MvaI | CCWGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 973, 1844, 1967, 2223 |
| NcoI | CCATGG | 1 cut(s) | 1041 |
| NdeI | CATATG | 1 cut(s) | 913 |
| NlaIV | GGNNCC | 9 cut(s) | 61, 290, 421, 1548, 1811, 2391, 2622, 2640, 2841 |
| NmuCI | GTSAC | 4 cut(s) | 853, 1492, 1622, 2108 |
| NsiI | ATGCAT | 4 cut(s) | 1891, 2188, 2192, 2650 |
| NspI | RCATGY | 5 cut(s) | 984, 1016, 1934, 2190, 2211 |
| PaeI | GCATGC | 1 cut(s) | 2190 |
| PagI | TCATGA | 1 cut(s) | 2353 |
| PciI | ACATGT | 2 cut(s) | 1930, 2207 |
| PctI | GAATGC | 1 cut(s) | 2743 |
| PdmI | GAANNNNTTC | 2 cut(s) | 649, 2795 |
| PfeI | GAWTC | 4 cut(s) | 149, 1379, 2036, 2484 |
| PfoI | TCCNGGA | 1 cut(s) | 1668 |
| PkrI | GCNGC | 9 cut(s) | 1406, 1618, 1837, 1916, 1960, 1963, 2377, 2422, 2887 |
| PleI | GAGTC | 4 cut(s) | 398, 835, 1453, 2852 |
| PmaCI | CACGTG | 1 cut(s) | 2561 |
| PmlI | CACGTG | 1 cut(s) | 2561 |
| PpsI | GAGTC | 4 cut(s) | 398, 835, 1453, 2852 |
| Ppu21I | YACGTR | 1 cut(s) | 2561 |
| PpuMI | RGGWCCY | 1 cut(s) | 1810 |
| PscI | ACATGT | 2 cut(s) | 1930, 2207 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2125 |
| PshBI | ATTAAT | 1 cut(s) | 1170 |
| PsiI | TTATAA | 1 cut(s) | 1218 |
| Psp5II | RGGWCCY | 1 cut(s) | 1810 |
| Psp6I | CCWGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| PspCI | CACGTG | 1 cut(s) | 2561 |
| PspFI | CCCAGC | 1 cut(s) | 2008 |
| PspGI | CCWGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| PspN4I | GGNNCC | 9 cut(s) | 61, 290, 421, 1548, 1811, 2391, 2622, 2640, 2841 |
| PspPI | GGNCC | 4 cut(s) | 1546, 1810, 2195, 2620 |
| PspPPI | RGGWCCY | 1 cut(s) | 1810 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 52, 84 |
| PstI | CTGCAG | 2 cut(s) | 2182, 2412 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2141 |
| PsuI | RGATCY | 3 cut(s) | 212, 2303, 2554 |
| PvuII | CAGCTG | 2 cut(s) | 1030, 1835 |
| RsaI | GTAC | 7 cut(s) | 253, 481, 540, 955, 996, 2201, 2823 |
| RsaNI | GTAC | 7 cut(s) | 252, 480, 539, 954, 995, 2200, 2822 |
| RseI | CAYNNNNRTG | 2 cut(s) | 39, 2352 |
| SalI | GTCGAC | 2 cut(s) | 242, 1894 |
| SaqAI | TTAA | 8 cut(s) | 159, 963, 1143, 1170, 1409, 1656, 1851, 1935 |
| SatI | GCNGC | 9 cut(s) | 1405, 1617, 1836, 1915, 1959, 1962, 2376, 2421, 2886 |
| Sau96I | GGNCC | 4 cut(s) | 1546, 1810, 2195, 2620 |
| ScaI | AGTACT | 1 cut(s) | 540 |
| SchI | GAGTC | 4 cut(s) | 399, 836, 1454, 2852 |
| ScrFI | CCNGG | 4 cut(s) | 1250, 1341, 1551, 1670 |
| SduI | GDGCHC | 1 cut(s) | 291 |
| SexAI | ACCWGGT | 1 cut(s) | 1248 |
| SfaNI | GCATC | 7 cut(s) | 355, 1024, 1252, 2061, 2173, 2657, 2758 |
| SfcI | CTRYAG | 4 cut(s) | 128, 224, 2178, 2408 |
| SinI | GGWCC | 3 cut(s) | 1546, 1810, 2195 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 39, 2352 |
| SmlI | CTYRAG | 4 cut(s) | 542, 1268, 2227, 2323 |
| SmoI | CTYRAG | 4 cut(s) | 542, 1268, 2227, 2323 |
| SpeI | ACTAGT | 2 cut(s) | 1556, 1841 |
| SphI | GCATGC | 1 cut(s) | 2190 |
| SsiI | CCGC | 3 cut(s) | 1116, 2255, 2886 |
| SspI | AATATT | 3 cut(s) | 1168, 2273, 2585 |
| SspMI | CTAG | 6 cut(s) | 930, 1557, 1814, 1842, 2252, 2742 |
| StyD4I | CCNGG | 4 cut(s) | 1248, 1339, 1549, 1668 |
| StyI | CCWWGG | 3 cut(s) | 292, 1041, 1813 |
| TaiI | ACGT | 3 cut(s) | 51, 584, 2563 |
| TaqI | TCGA | 4 cut(s) | 243, 470, 1895, 1919 |
| TatI | WGTACW | 3 cut(s) | 479, 538, 953 |
| TauI | GCSGC | 1 cut(s) | 2888 |
| TfiI | GAWTC | 4 cut(s) | 149, 1379, 2036, 2484 |
| Tru1I | TTAA | 8 cut(s) | 159, 963, 1143, 1170, 1409, 1656, 1851, 1935 |
| Tru9I | TTAA | 8 cut(s) | 159, 963, 1143, 1170, 1409, 1656, 1851, 1935 |
| TscAI | CASTG | 6 cut(s) | 224, 700, 795, 1497, 2019, 2575 |
| TseFI | GTSAC | 4 cut(s) | 853, 1492, 1622, 2108 |
| TseI | GCWGC | 8 cut(s) | 1404, 1616, 1835, 1914, 1958, 1961, 2375, 2420 |
| Tsp45I | GTSAC | 4 cut(s) | 853, 1492, 1622, 2108 |
| TspGWI | ACGGA | 3 cut(s) | 502, 658, 2187 |
| TspRI | CASTG | 6 cut(s) | 224, 700, 795, 1497, 2019, 2575 |
| VpaK11BI | GGWCC | 3 cut(s) | 1546, 1810, 2195 |
| VspI | ATTAAT | 1 cut(s) | 1170 |
| XapI | RAATTY | 4 cut(s) | 532, 1767, 2053, 2707 |
| XceI | RCATGY | 5 cut(s) | 984, 1016, 1934, 2190, 2211 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 413, 2850 |
| XmaJI | CCTAGG | 1 cut(s) | 1813 |
| XmiI | GTMKAC | 4 cut(s) | 45, 243, 939, 1895 |
| XmnI | GAANNNNTTC | 2 cut(s) | 649, 2795 |
| XspI | CTAG | 6 cut(s) | 930, 1557, 1814, 1842, 2252, 2742 |
| ZrmI | AGTACT | 1 cut(s) | 540 |
| Zsp2I | ATGCAT | 4 cut(s) | 1891, 2188, 2192, 2650 |