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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g32010 FvH4_5g32010 |
| prunus_persica | Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 Prupe.1G553900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0228011 |
| rosa_laevigata | RLG00000001596 |
| rosa_multiflora | Rmu_sc0015384.1_g000001 Rmu_sc0018857.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00231650 |
| rosa_rugosa | Rorug07G0244900 Rorug07G0245000 Rorug07G0245100 Rorug07G0245200 |
| rosa_samantha | Rh7AG398900 Rh7BG380300 Rh7CG417000 Rh7DG394500 |
| rosa_wichuraiana | Rw7G033160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 513 |
| Acc36I | ACCTGC | 1 cut(s) | 1184 |
| AccI | GTMKAC | 3 cut(s) | 55, 747, 1697 |
| AciI | CCGC | 5 cut(s) | 41, 131, 601, 1934, 2685 |
| AclWI | GGATC | 4 cut(s) | 19, 1393, 2045, 2348 |
| AcoI | YGGCCR | 1 cut(s) | 813 |
| AcsI | RAATTY | 5 cut(s) | 340, 584, 1569, 1855, 2506 |
| AcuI | CTGAAG | 5 cut(s) | 390, 579, 873, 1110, 2659 |
| AcvI | CACGTG | 1 cut(s) | 2360 |
| AdeI | CACNNNGTG | 1 cut(s) | 740 |
| AfaI | GTAC | 7 cut(s) | 61, 289, 348, 763, 804, 2003, 2622 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 41, 1343, 2631, 2648, 2691 |
| AflIII | ACRYGT | 2 cut(s) | 2009, 2425 |
| AgeI | ACCGGT | 1 cut(s) | 1294 |
| AhlI | ACTAGT | 2 cut(s) | 1361, 1643 |
| AjiI | CACGTC | 1 cut(s) | 1327 |
| AjnI | CCWGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 75, 107, 1651, 1683 |
| Alw26I | GTCTC | 5 cut(s) | 351, 1037, 1271, 1935, 2065 |
| AlwI | GGATC | 4 cut(s) | 19, 1393, 2045, 2348 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1943 |
| AoxI | GGCC | 4 cut(s) | 813, 2418, 2477, 2682 |
| ApeKI | GCWGC | 7 cut(s) | 1421, 1637, 1716, 1760, 1763, 2177, 2222 |
| ApoI | RAATTY | 5 cut(s) | 340, 584, 1569, 1855, 2506 |
| AseI | ATTAAT | 1 cut(s) | 978 |
| AsiGI | ACCGGT | 1 cut(s) | 1294 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 457, 2594 |
| AspA2I | CCTAGG | 1 cut(s) | 1615 |
| AspS9I | GGNCC | 4 cut(s) | 1351, 1612, 1997, 2419 |
| AsuHPI | GGTGA | 4 cut(s) | 973, 1309, 1922, 2238 |
| AvaII | GGWCC | 3 cut(s) | 1351, 1612, 1997 |
| AvrII | CCTAGG | 1 cut(s) | 1615 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2604, 2637 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1420, 1452 |
| BbrPI | CACGTG | 1 cut(s) | 2360 |
| BbsI | GAAGAC | 3 cut(s) | 90, 585, 630 |
| BbvI | GCAGC | 7 cut(s) | 1408, 1624, 1728, 1747, 1750, 2164, 2209 |
| BceAI | ACGGC | 1 cut(s) | 800 |
| BciT130I | CCWGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| BciVI | GTATCC | 1 cut(s) | 1503 |
| BcoDI | GTCTC | 5 cut(s) | 351, 1037, 1271, 1935, 2065 |
| BcuI | ACTAGT | 2 cut(s) | 1361, 1643 |
| BfaI | CTAG | 7 cut(s) | 738, 1362, 1616, 1644, 1821, 2024, 2541 |
| BfmI | CTRYAG | 4 cut(s) | 36, 744, 1980, 2210 |
| BfuAI | ACCTGC | 1 cut(s) | 1184 |
| BfuI | GTATCC | 1 cut(s) | 1503 |
| BglII | AGATCT | 1 cut(s) | 2105 |
| BisI | GCNGC | 8 cut(s) | 1422, 1638, 1717, 1761, 1764, 2178, 2223, 2685 |
| BlnI | CCTAGG | 1 cut(s) | 1615 |
| BlsI | GCNGC | 8 cut(s) | 1423, 1639, 1718, 1762, 1765, 2179, 2224, 2686 |
| BmcAI | AGTACT | 1 cut(s) | 348 |
| Bme1390I | CCNGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| Bme18I | GGWCC | 3 cut(s) | 1351, 1612, 1997 |
| BmgBI | CACGTC | 1 cut(s) | 1327 |
| BmgT120I | GGNCC | 4 cut(s) | 1351, 1612, 1997, 2419 |
| BmiI | GGNNCC | 7 cut(s) | 229, 1353, 1613, 2193, 2421, 2439, 2640 |
| BmrFI | CCNGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| BmrI | ACTGGG | 2 cut(s) | 507, 941 |
| BmsI | GCATC | 6 cut(s) | 106, 832, 1060, 1975, 2456, 2557 |
| BmuI | ACTGGG | 2 cut(s) | 507, 941 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1927 |
| BpiI | GAAGAC | 3 cut(s) | 90, 585, 630 |
| BpuEI | CTTGAG | 4 cut(s) | 371, 1097, 2050, 2146 |
| BsaAI | YACGTR | 1 cut(s) | 2360 |
| BsaBI | GATNNNNATC | 1 cut(s) | 558 |
| BsaJI | CCNNGG | 5 cut(s) | 1057, 1148, 1182, 1354, 1615 |
| BsaWI | WCCGGW | 2 cut(s) | 1294, 2404 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 41, 1343, 2631, 2648, 2691 |
| Bse118I | RCCGGY | 2 cut(s) | 1294, 1336 |
| Bse1I | ACTGG | 4 cut(s) | 513, 763, 947, 1425 |
| Bse3DI | GCAATG | 4 cut(s) | 629, 880, 1252, 2463 |
| Bse8I | GATNNNNATC | 1 cut(s) | 558 |
| BseBI | CCWGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| BseDI | CCNNGG | 5 cut(s) | 1057, 1148, 1182, 1354, 1615 |
| BseGI | GGATG | 8 cut(s) | 301, 559, 847, 1388, 2223, 2450, 2538, 2657 |
| BseJI | GATNNNNATC | 1 cut(s) | 558 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 41, 1343, 2631, 2648, 2691 |
| BseMI | GCAATG | 4 cut(s) | 629, 880, 1252, 2463 |
| BseMII | CTCAG | 8 cut(s) | 510, 666, 852, 1189, 1511, 1662, 1764, 2132 |
| BseNI | ACTGG | 4 cut(s) | 513, 763, 947, 1425 |
| BseRI | GAGGAG | 4 cut(s) | 35, 434, 1126, 2647 |
| BseXI | GCAGC | 7 cut(s) | 1408, 1624, 1728, 1747, 1750, 2164, 2209 |
| BseYI | CCCAGC | 1 cut(s) | 1810 |
| BsgI | GTGCAG | 1 cut(s) | 420 |
| BshFI | GGCC | 4 cut(s) | 815, 2420, 2479, 2684 |
| BshTI | ACCGGT | 1 cut(s) | 1294 |
| BsiSI | CCGG | 3 cut(s) | 1295, 1337, 2405 |
| BslFI | GGGAC | 5 cut(s) | 983, 1337, 1625, 1793, 2669 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 41, 1343, 2631, 2648, 2691 |
| BsmAI | GTCTC | 5 cut(s) | 351, 1037, 1271, 1935, 2065 |
| BsmFI | GGGAC | 5 cut(s) | 983, 1337, 1625, 1793, 2669 |
| BsmI | GAATGC | 2 cut(s) | 1878, 2542 |
| BsnI | GGCC | 4 cut(s) | 815, 2420, 2479, 2684 |
| Bsp1407I | TGTACA | 1 cut(s) | 287 |
| Bsp143I | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| BspACI | CCGC | 5 cut(s) | 41, 131, 601, 1934, 2685 |
| BspANI | GGCC | 4 cut(s) | 815, 2420, 2479, 2684 |
| BspCNI | CTCAG | 8 cut(s) | 509, 665, 853, 1188, 1510, 1663, 1765, 2131 |
| BspLI | GGNNCC | 7 cut(s) | 229, 1353, 1613, 2193, 2421, 2439, 2640 |
| BspMAI | CTGCAG | 2 cut(s) | 1984, 2214 |
| BspMI | ACCTGC | 1 cut(s) | 1184 |
| BspPI | GGATC | 4 cut(s) | 19, 1393, 2045, 2348 |
| BsrDI | GCAATG | 4 cut(s) | 629, 880, 1252, 2463 |
| BsrFI | RCCGGY | 2 cut(s) | 1294, 1336 |
| BsrGI | TGTACA | 1 cut(s) | 287 |
| BsrI | ACTGG | 4 cut(s) | 513, 763, 947, 1425 |
| BssAI | RCCGGY | 2 cut(s) | 1294, 1336 |
| BssECI | CCNNGG | 5 cut(s) | 1057, 1148, 1182, 1354, 1615 |
| BssMI | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| BssT1I | CCWWGG | 1 cut(s) | 1615 |
| Bst2UI | CCWGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| Bst6I | CTCTTC | 6 cut(s) | 280, 672, 1144, 1482, 2068, 2624 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1646 |
| BstAUI | TGTACA | 1 cut(s) | 287 |
| BstBAI | YACGTR | 1 cut(s) | 2360 |
| BstC8I | GCNNGC | 3 cut(s) | 786, 1938, 1990 |
| BstDEI | CTNAG | 9 cut(s) | 496, 652, 861, 1002, 1175, 1497, 1671, 1773, 2118 |
| BstDSI | CCRYGG | 1 cut(s) | 1182 |
| BstF5I | GGATG | 8 cut(s) | 301, 559, 847, 1388, 2223, 2450, 2538, 2657 |
| BstKTI | GATC | 9 cut(s) | 27, 1040, 1388, 1459, 1888, 2053, 2108, 2356, 2491 |
| BstMAI | GTCTC | 5 cut(s) | 351, 1037, 1271, 1935, 2065 |
| BstMBI | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 781, 1646, 1769, 2025 |
| BstNI | CCWGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| BstNSI | RCATGY | 6 cut(s) | 792, 824, 1736, 1992, 2013, 2429 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1927 |
| BstSCI | CCNGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| BstSFI | CTRYAG | 4 cut(s) | 36, 744, 1980, 2210 |
| BstV1I | GCAGC | 7 cut(s) | 1408, 1624, 1728, 1747, 1750, 2164, 2209 |
| BstV2I | GAAGAC | 3 cut(s) | 90, 585, 630 |
| BstX2I | RGATCY | 3 cut(s) | 24, 2105, 2353 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2606 |
| BstYI | RGATCY | 3 cut(s) | 24, 2105, 2353 |
| BsuI | GTATCC | 1 cut(s) | 1503 |
| BsuRI | GGCC | 4 cut(s) | 815, 2420, 2479, 2684 |
| BtgI | CCRYGG | 1 cut(s) | 1182 |
| BtrI | CACGTC | 1 cut(s) | 1327 |
| BtsCI | GGATG | 8 cut(s) | 301, 559, 847, 1388, 2223, 2450, 2538, 2657 |
| BtsI | GCAGTG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 6 cut(s) | 29, 508, 580, 603, 1814, 2367 |
| BveI | ACCTGC | 1 cut(s) | 1184 |
| Cac8I | GCNNGC | 3 cut(s) | 786, 1938, 1990 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1943 |
| Cfr10I | RCCGGY | 2 cut(s) | 1294, 1336 |
| Cfr13I | GGNCC | 4 cut(s) | 1351, 1612, 1997, 2419 |
| CseI | GACGC | 1 cut(s) | 182 |
| Csp6I | GTAC | 7 cut(s) | 60, 288, 347, 762, 803, 2002, 2621 |
| CspAI | ACCGGT | 1 cut(s) | 1294 |
| CviQI | GTAC | 7 cut(s) | 60, 288, 347, 762, 803, 2002, 2621 |
| DdeI | CTNAG | 9 cut(s) | 496, 652, 861, 1002, 1175, 1497, 1671, 1773, 2118 |
| DpnI | GATC | 9 cut(s) | 26, 1039, 1387, 1458, 1887, 2052, 2107, 2355, 2490 |
| DpnII | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| DraI | TTTAAA | 1 cut(s) | 1654 |
| DraIII | CACNNNGTG | 1 cut(s) | 740 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 513 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 513 |
| EaeI | YGGCCR | 1 cut(s) | 813 |
| Eam1104I | CTCTTC | 6 cut(s) | 280, 672, 1144, 1482, 2068, 2624 |
| EarI | CTCTTC | 6 cut(s) | 280, 672, 1144, 1482, 2068, 2624 |
| EciI | GGCGGA | 1 cut(s) | 1923 |
| Eco130I | CCWWGG | 1 cut(s) | 1615 |
| Eco32I | GATATC | 3 cut(s) | 165, 560, 1471 |
| Eco47I | GGWCC | 3 cut(s) | 1351, 1612, 1997 |
| Eco57I | CTGAAG | 5 cut(s) | 390, 579, 873, 1110, 2659 |
| Eco72I | CACGTG | 1 cut(s) | 2360 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1612 |
| EcoRI | GAATTC | 3 cut(s) | 584, 1569, 1855 |
| EcoRII | CCWGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| EcoRV | GATATC | 3 cut(s) | 165, 560, 1471 |
| EcoT14I | CCWWGG | 1 cut(s) | 1615 |
| EcoT22I | ATGCAT | 4 cut(s) | 1693, 1990, 1994, 2449 |
| ErhI | CCWWGG | 1 cut(s) | 1615 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 651, 683, 1123, 1155 |
| FaqI | GGGAC | 5 cut(s) | 983, 1337, 1625, 1793, 2669 |
| FauI | CCCGC | 1 cut(s) | 34 |
| FauNDI | CATATG | 2 cut(s) | 721, 2344 |
| FblI | GTMKAC | 3 cut(s) | 55, 747, 1697 |
| Fnu4HI | GCNGC | 8 cut(s) | 1422, 1638, 1717, 1761, 1764, 2178, 2223, 2685 |
| FokI | GGATG | 8 cut(s) | 308, 566, 854, 1375, 2230, 2437, 2545, 2664 |
| Fsp4HI | GCNGC | 8 cut(s) | 1422, 1638, 1717, 1761, 1764, 2178, 2223, 2685 |
| FspBI | CTAG | 7 cut(s) | 738, 1362, 1616, 1644, 1821, 2024, 2541 |
| GluI | GCNGC | 8 cut(s) | 1422, 1638, 1717, 1761, 1764, 2178, 2223, 2685 |
| GsaI | CCCAGC | 1 cut(s) | 1814 |
| HaeIII | GGCC | 4 cut(s) | 815, 2420, 2479, 2684 |
| HapII | CCGG | 3 cut(s) | 1295, 1337, 2405 |
| HgaI | GACGC | 1 cut(s) | 182 |
| HincII | GTYRAC | 2 cut(s) | 56, 1698 |
| HindII | GTYRAC | 2 cut(s) | 56, 1698 |
| HindIII | AAGCTT | 3 cut(s) | 429, 773, 885 |
| HinfI | GANTC | 6 cut(s) | 198, 635, 1187, 1250, 1838, 2657 |
| HpaII | CCGG | 3 cut(s) | 1295, 1337, 2405 |
| HphI | GGTGA | 4 cut(s) | 973, 1309, 1922, 2238 |
| Hpy166II | GTNNAC | 5 cut(s) | 56, 506, 748, 1698, 2323 |
| Hpy8I | GTNNAC | 5 cut(s) | 56, 506, 748, 1698, 2323 |
| Hpy99I | CGWCG | 2 cut(s) | 60, 1702 |
| HpyCH4IV | ACGT | 5 cut(s) | 58, 389, 570, 1326, 2359 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 781, 1646, 1769, 2025 |
| HpyF3I | CTNAG | 9 cut(s) | 496, 652, 861, 1002, 1175, 1497, 1671, 1773, 2118 |
| HpySE526I | ACGT | 5 cut(s) | 58, 389, 570, 1326, 2359 |
| Kzo9I | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| LmnI | GCTCC | 4 cut(s) | 1139, 1184, 1922, 2501 |
| Lsp1109I | GCAGC | 7 cut(s) | 1408, 1624, 1728, 1747, 1750, 2164, 2209 |
| LweI | GCATC | 6 cut(s) | 106, 832, 1060, 1975, 2456, 2557 |
| MaeI | CTAG | 7 cut(s) | 738, 1362, 1616, 1644, 1821, 2024, 2541 |
| MaeII | ACGT | 5 cut(s) | 58, 389, 570, 1326, 2359 |
| MaeIII | GTNAC | 8 cut(s) | 170, 385, 661, 1297, 1427, 1910, 2156, 2347 |
| MalI | GATC | 9 cut(s) | 26, 1039, 1387, 1458, 1887, 2052, 2107, 2355, 2490 |
| MboI | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| MfeI | CAATTG | 2 cut(s) | 897, 1925 |
| MflI | RGATCY | 3 cut(s) | 24, 2105, 2353 |
| MlyI | GAGTC | 4 cut(s) | 207, 644, 1259, 2651 |
| MmeI | TCCRAC | 3 cut(s) | 672, 1604, 2623 |
| Mph1103I | ATGCAT | 4 cut(s) | 1693, 1990, 1994, 2449 |
| MroXI | GAANNNNTTC | 2 cut(s) | 457, 2594 |
| MseI | TTAA | 7 cut(s) | 771, 951, 978, 1214, 1461, 1653, 1752 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2154 |
| MspA1I | CMGCKG | 3 cut(s) | 41, 838, 1637 |
| MspI | CCGG | 3 cut(s) | 1295, 1337, 2405 |
| MspR9I | CCNGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| MunI | CAATTG | 2 cut(s) | 897, 1925 |
| Mva1269I | GAATGC | 2 cut(s) | 1878, 2542 |
| MvaI | CCWGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 781, 1646, 1769, 2025 |
| NdeI | CATATG | 2 cut(s) | 721, 2344 |
| NdeII | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| NlaIV | GGNNCC | 7 cut(s) | 229, 1353, 1613, 2193, 2421, 2439, 2640 |
| NmuCI | GTSAC | 6 cut(s) | 170, 661, 1297, 1910, 2156, 2347 |
| NsiI | ATGCAT | 4 cut(s) | 1693, 1990, 1994, 2449 |
| NspI | RCATGY | 6 cut(s) | 792, 824, 1736, 1992, 2013, 2429 |
| PaeI | GCATGC | 1 cut(s) | 1992 |
| PciI | ACATGT | 2 cut(s) | 2009, 2425 |
| PctI | GAATGC | 2 cut(s) | 1878, 2542 |
| PdmI | GAANNNNTTC | 2 cut(s) | 457, 2594 |
| PfeI | GAWTC | 2 cut(s) | 1187, 1838 |
| PfoI | TCCNGGA | 1 cut(s) | 1473 |
| PinAI | ACCGGT | 1 cut(s) | 1294 |
| PkrI | GCNGC | 8 cut(s) | 1423, 1639, 1718, 1762, 1765, 2179, 2224, 2686 |
| PleI | GAGTC | 4 cut(s) | 206, 643, 1258, 2651 |
| PmaCI | CACGTG | 1 cut(s) | 2360 |
| PmlI | CACGTG | 1 cut(s) | 2360 |
| PpsI | GAGTC | 4 cut(s) | 206, 643, 1258, 2651 |
| Ppu21I | YACGTR | 1 cut(s) | 2360 |
| PpuMI | RGGWCCY | 1 cut(s) | 1612 |
| PscI | ACATGT | 2 cut(s) | 2009, 2425 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1927 |
| PshBI | ATTAAT | 1 cut(s) | 978 |
| Psp5II | RGGWCCY | 1 cut(s) | 1612 |
| Psp6I | CCWGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| PspCI | CACGTG | 1 cut(s) | 2360 |
| PspFI | CCCAGC | 1 cut(s) | 1810 |
| PspGI | CCWGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| PspN4I | GGNNCC | 7 cut(s) | 229, 1353, 1613, 2193, 2421, 2439, 2640 |
| PspPI | GGNCC | 4 cut(s) | 1351, 1612, 1997, 2419 |
| PspPPI | RGGWCCY | 1 cut(s) | 1612 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2421, 2453 |
| PstI | CTGCAG | 2 cut(s) | 1984, 2214 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1943 |
| PsuI | RGATCY | 3 cut(s) | 24, 2105, 2353 |
| PvuII | CAGCTG | 2 cut(s) | 838, 1637 |
| RsaI | GTAC | 7 cut(s) | 61, 289, 348, 763, 804, 2003, 2622 |
| RsaNI | GTAC | 7 cut(s) | 60, 288, 347, 762, 803, 2002, 2621 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2154 |
| SalI | GTCGAC | 2 cut(s) | 54, 1696 |
| SaqAI | TTAA | 7 cut(s) | 771, 951, 978, 1214, 1461, 1653, 1752 |
| SatI | GCNGC | 8 cut(s) | 1422, 1638, 1717, 1761, 1764, 2178, 2223, 2685 |
| Sau3AI | GATC | 9 cut(s) | 24, 1037, 1385, 1456, 1885, 2050, 2105, 2353, 2488 |
| Sau96I | GGNCC | 4 cut(s) | 1351, 1612, 1997, 2419 |
| ScaI | AGTACT | 1 cut(s) | 348 |
| SchI | GAGTC | 4 cut(s) | 207, 644, 1259, 2651 |
| ScrFI | CCNGG | 4 cut(s) | 1058, 1149, 1356, 1475 |
| SfaNI | GCATC | 6 cut(s) | 106, 832, 1060, 1975, 2456, 2557 |
| SfcI | CTRYAG | 4 cut(s) | 36, 744, 1980, 2210 |
| SinI | GGWCC | 3 cut(s) | 1351, 1612, 1997 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2154 |
| SmlI | CTYRAG | 4 cut(s) | 350, 1076, 2029, 2125 |
| SmoI | CTYRAG | 4 cut(s) | 350, 1076, 2029, 2125 |
| SpeI | ACTAGT | 2 cut(s) | 1361, 1643 |
| SphI | GCATGC | 1 cut(s) | 1992 |
| SsiI | CCGC | 5 cut(s) | 41, 131, 601, 1934, 2685 |
| SspI | AATATT | 2 cut(s) | 2075, 2384 |
| SspMI | CTAG | 7 cut(s) | 738, 1362, 1616, 1644, 1821, 2024, 2541 |
| StyD4I | CCNGG | 4 cut(s) | 1056, 1147, 1354, 1473 |
| StyI | CCWWGG | 1 cut(s) | 1615 |
| TaiI | ACGT | 5 cut(s) | 61, 392, 573, 1329, 2362 |
| TaqI | TCGA | 4 cut(s) | 55, 278, 1697, 1721 |
| TatI | WGTACW | 2 cut(s) | 287, 346 |
| TauI | GCSGC | 1 cut(s) | 2687 |
| TfiI | GAWTC | 2 cut(s) | 1187, 1838 |
| Tru1I | TTAA | 7 cut(s) | 771, 951, 978, 1214, 1461, 1653, 1752 |
| Tru9I | TTAA | 7 cut(s) | 771, 951, 978, 1214, 1461, 1653, 1752 |
| TscAI | CASTG | 6 cut(s) | 36, 508, 580, 603, 1821, 2374 |
| TseFI | GTSAC | 6 cut(s) | 170, 661, 1297, 1910, 2156, 2347 |
| TseI | GCWGC | 7 cut(s) | 1421, 1637, 1716, 1760, 1763, 2177, 2222 |
| Tsp45I | GTSAC | 6 cut(s) | 170, 661, 1297, 1910, 2156, 2347 |
| TspGWI | ACGGA | 4 cut(s) | 310, 466, 1171, 1989 |
| TspRI | CASTG | 6 cut(s) | 36, 508, 580, 603, 1821, 2374 |
| VpaK11BI | GGWCC | 3 cut(s) | 1351, 1612, 1997 |
| VspI | ATTAAT | 1 cut(s) | 978 |
| XapI | RAATTY | 5 cut(s) | 340, 584, 1569, 1855, 2506 |
| XceI | RCATGY | 6 cut(s) | 792, 824, 1736, 1992, 2013, 2429 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 954, 2649 |
| XmaJI | CCTAGG | 1 cut(s) | 1615 |
| XmiI | GTMKAC | 3 cut(s) | 55, 747, 1697 |
| XmnI | GAANNNNTTC | 2 cut(s) | 457, 2594 |
| XspI | CTAG | 7 cut(s) | 738, 1362, 1616, 1644, 1821, 2024, 2541 |
| ZrmI | AGTACT | 1 cut(s) | 348 |
| Zsp2I | ATGCAT | 4 cut(s) | 1693, 1990, 1994, 2449 |